AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene04496

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene04496.t1 MTR_3g463400 93.805 452 20 3 1 445 1 451 0.0 845
MS.gene04496.t1 MTR_5g070020 48.537 410 140 15 5 409 11 354 5.89e-110 328
MS.gene04496.t1 MTR_3g077650 42.647 272 113 7 28 283 90 334 1.34e-59 201
MS.gene04496.t1 MTR_4g105660 65.649 131 40 1 132 262 178 303 3.83e-57 194
MS.gene04496.t1 MTR_5g049190 48.500 200 81 4 132 322 17 203 6.91e-56 185
MS.gene04496.t1 MTR_4g088015 58.108 148 57 2 132 279 219 361 8.60e-55 189
MS.gene04496.t1 MTR_7g451170 57.823 147 55 2 133 278 190 330 7.09e-53 182
MS.gene04496.t1 MTR_7g037260 56.934 137 54 2 130 266 141 272 7.43e-52 179
MS.gene04496.t1 MTR_7g037130 53.285 137 59 2 130 266 141 272 4.19e-46 163
MS.gene04496.t1 MTR_7g035350 35.385 260 139 4 17 266 113 353 1.04e-45 164
MS.gene04496.t1 MTR_1g057980 54.135 133 57 1 134 266 80 208 1.07e-44 158
MS.gene04496.t1 MTR_7g450950 51.515 132 61 1 133 264 156 284 3.65e-41 149
MS.gene04496.t1 MTR_7g061330 60.714 112 44 0 123 234 102 213 9.16e-41 153
MS.gene04496.t1 MTR_7g461410 60.714 112 44 0 123 234 102 213 9.16e-41 153
MS.gene04496.t1 MTR_7g061330 44.390 205 108 4 123 322 66 269 1.18e-40 152
MS.gene04496.t1 MTR_3g110028 56.250 112 49 0 123 234 74 185 2.12e-38 149
MS.gene04496.t1 MTR_1g026870 54.464 112 51 0 123 234 74 185 1.78e-37 146
MS.gene04496.t1 MTR_5g010650 46.259 147 66 2 95 228 58 204 1.50e-36 140
MS.gene04496.t1 MTR_4g019370 52.941 102 48 0 133 234 37 138 5.05e-34 130
MS.gene04496.t1 MTR_4g094982 50.000 104 52 0 133 236 4 107 1.67e-31 122
MS.gene04496.t1 MTR_3g101290 50.000 102 51 0 133 234 36 137 5.84e-31 119
MS.gene04496.t1 MTR_6g009430 43.056 144 76 4 123 263 3 143 1.32e-30 121
MS.gene04496.t1 MTR_5g016510 48.077 104 54 0 133 236 4 107 1.66e-30 120
MS.gene04496.t1 MTR_1g085040 44.203 138 71 4 132 267 12 145 3.85e-30 120
MS.gene04496.t1 MTR_4g082040 50.000 112 53 1 134 242 105 216 5.76e-30 121
MS.gene04496.t1 MTR_6g027360 49.515 103 52 0 132 234 76 178 1.12e-29 117
MS.gene04496.t1 MTR_8g017440 49.515 103 49 2 134 234 14 115 1.21e-29 118
MS.gene04496.t1 MTR_5g041570 46.400 125 64 1 121 242 121 245 1.43e-29 120
MS.gene04496.t1 MTR_8g017540 50.485 103 48 2 134 234 60 161 2.08e-29 119
MS.gene04496.t1 MTR_6g027340 48.515 101 52 0 134 234 16 116 2.14e-29 114
MS.gene04496.t1 MTR_2g089450 35.981 214 118 7 132 336 12 215 2.22e-29 115
MS.gene04496.t1 MTR_0008s0390 41.606 137 75 3 120 252 1 136 2.41e-29 116
MS.gene04496.t1 MTR_6g074860 51.000 100 49 0 134 233 4 103 2.53e-29 115
MS.gene04496.t1 MTR_7g110830 38.462 182 100 6 132 306 12 188 3.15e-29 117
MS.gene04496.t1 MTR_1g085640 37.173 191 94 5 132 299 12 199 4.02e-29 118
MS.gene04496.t1 MTR_7g086960 39.634 164 89 2 134 293 89 246 4.40e-29 117
MS.gene04496.t1 MTR_8g017500 49.515 103 49 2 134 234 14 115 8.00e-29 116
MS.gene04496.t1 MTR_2g011660 43.966 116 64 1 120 234 1 116 9.36e-29 116
MS.gene04496.t1 MTR_5g010020 48.454 97 49 1 134 229 14 110 1.06e-28 115
MS.gene04496.t1 MTR_5g082910 47.959 98 51 0 133 230 18 115 1.36e-28 114
MS.gene04496.t1 MTR_3g089045 50.435 115 54 1 131 242 13 127 1.74e-28 114
MS.gene04496.t1 MTR_5g029840 42.241 116 65 2 120 234 1 115 1.80e-28 115
MS.gene04496.t1 MTR_4g091490 44.444 117 62 2 120 234 1 116 2.03e-28 115
MS.gene04496.t1 MTR_3g065440 32.701 211 135 5 120 328 1 206 2.72e-28 114
MS.gene04496.t1 MTR_2g089420 47.368 114 56 3 132 242 11 123 3.08e-28 116
MS.gene04496.t1 MTR_3g077110 47.619 105 52 2 132 234 12 115 3.49e-28 114
MS.gene04496.t1 MTR_2g099740 47.573 103 51 2 134 234 14 115 4.03e-28 115
MS.gene04496.t1 MTR_4g073420 38.690 168 91 5 134 290 14 180 4.37e-28 112
MS.gene04496.t1 MTR_7g111290 51.515 99 45 2 132 228 12 109 5.22e-28 114
MS.gene04496.t1 MTR_1g112760 47.619 105 52 2 132 234 13 116 6.84e-28 110
MS.gene04496.t1 MTR_2g097910 45.378 119 61 3 132 247 20 137 8.20e-28 112
MS.gene04496.t1 MTR_6g027370 48.039 102 53 0 133 234 98 199 9.38e-28 113
MS.gene04496.t1 MTR_8g017390 49.038 104 49 3 134 234 14 116 9.66e-28 115
MS.gene04496.t1 MTR_2g064160 45.631 103 53 2 134 234 13 114 1.14e-27 112
MS.gene04496.t1 MTR_4g065017 44.915 118 63 2 132 247 17 134 1.18e-27 112
MS.gene04496.t1 MTR_5g078140 47.009 117 58 3 120 234 1 115 1.36e-27 112
MS.gene04496.t1 MTR_3g028740 42.735 117 66 1 119 234 9 125 1.45e-27 112
MS.gene04496.t1 MTR_0251s0050 42.735 117 64 2 120 234 1 116 1.59e-27 111
MS.gene04496.t1 MTR_3g074520 46.154 117 59 3 120 234 1 115 1.89e-27 112
MS.gene04496.t1 MTR_4g105130 45.192 104 56 1 132 234 12 115 2.18e-27 112
MS.gene04496.t1 MTR_8g017340 49.038 104 49 3 134 234 14 116 2.19e-27 114
MS.gene04496.t1 MTR_4g100720 48.454 97 49 1 134 229 15 111 2.53e-27 107
MS.gene04496.t1 MTR_4g478180 44.915 118 61 3 119 234 1 116 2.76e-27 112
MS.gene04496.t1 MTR_3g461490 42.647 136 74 3 134 268 14 146 2.89e-27 111
MS.gene04496.t1 MTR_8g095390 44.340 106 57 2 134 237 14 119 3.06e-27 111
MS.gene04496.t1 MTR_8g031360 44.444 117 63 1 120 234 1 117 3.18e-27 110
MS.gene04496.t1 MTR_4g102380 44.444 117 61 3 120 234 1 115 4.03e-27 110
MS.gene04496.t1 MTR_5g079670 46.602 103 52 2 134 234 13 114 4.21e-27 108
MS.gene04496.t1 MTR_0008s0470 41.026 117 66 2 120 234 1 116 4.85e-27 110
MS.gene04496.t1 MTR_3g052450 48.571 105 52 2 132 234 40 144 7.11e-27 113
MS.gene04496.t1 MTR_7g011170 45.299 117 60 3 120 234 1 115 9.56e-27 109
MS.gene04496.t1 MTR_8g017350 48.077 104 50 3 134 234 14 116 1.17e-26 113
MS.gene04496.t1 MTR_3g097450 36.585 164 79 5 134 294 14 155 1.17e-26 109
MS.gene04496.t1 MTR_8g027345 41.353 133 76 2 120 251 1 132 1.25e-26 109
MS.gene04496.t1 MTR_3g052430 48.571 105 52 2 132 234 41 145 1.45e-26 112
MS.gene04496.t1 MTR_8g098860 43.137 102 57 1 134 234 14 115 1.82e-26 109
MS.gene04496.t1 MTR_4g063100 46.296 108 55 2 134 239 9 115 1.87e-26 107
MS.gene04496.t1 MTR_4g485530 41.228 114 66 1 122 234 2 115 2.39e-26 105
MS.gene04496.t1 MTR_6g015455 44.231 104 58 0 133 236 4 107 2.55e-26 113
MS.gene04496.t1 MTR_4g082230 42.017 119 67 2 120 237 1 118 2.93e-26 110
MS.gene04496.t1 MTR_4g082290 42.017 119 67 2 120 237 1 118 2.99e-26 110
MS.gene04496.t1 MTR_2g089620 43.966 116 63 2 120 234 1 115 4.61e-26 108
MS.gene04496.t1 MTR_5g007370 44.762 105 55 2 132 234 12 115 9.44e-26 106
MS.gene04496.t1 MTR_3g011610 48.571 105 50 3 132 233 37 140 1.45e-25 109
MS.gene04496.t1 MTR_1g043050 35.354 198 99 7 132 317 12 192 1.63e-25 105
MS.gene04496.t1 MTR_4g029540 50.000 102 49 2 134 233 12 113 2.78e-25 105
MS.gene04496.t1 MTR_1g073170 46.429 112 52 3 134 243 22 127 2.82e-25 104
MS.gene04496.t1 MTR_4g125520 44.144 111 60 2 120 229 1 110 3.23e-25 105
MS.gene04496.t1 MTR_8g042410 46.226 106 54 2 132 235 37 141 3.67e-25 108
MS.gene04496.t1 MTR_0197s0010 50.526 95 44 2 137 229 6 99 5.65e-25 102
MS.gene04496.t1 MTR_7g076740 43.590 117 63 2 120 234 1 116 5.97e-25 104
MS.gene04496.t1 MTR_5g042030 41.818 110 63 1 129 237 4 113 5.99e-25 104
MS.gene04496.t1 MTR_8g020490 48.148 108 50 2 122 228 3 105 6.54e-25 103
MS.gene04496.t1 MTR_2g096380 34.591 159 93 3 134 290 8 157 7.90e-25 102
MS.gene04496.t1 MTR_7g096930 40.288 139 70 4 120 247 1 137 9.33e-25 103
MS.gene04496.t1 MTR_7g117730 44.144 111 60 2 120 229 1 110 1.20e-24 102
MS.gene04496.t1 MTR_7g115650 31.863 204 113 5 134 328 14 200 1.33e-24 101
MS.gene04496.t1 MTR_1g021230 46.667 105 53 2 132 234 57 160 1.33e-24 105
MS.gene04496.t1 MTR_1g045610 42.400 125 64 3 134 256 23 141 1.37e-24 102
MS.gene04496.t1 MTR_1g100653 45.133 113 58 3 134 243 14 125 1.52e-24 103
MS.gene04496.t1 MTR_2g034790 43.966 116 63 2 120 234 1 115 1.91e-24 103
MS.gene04496.t1 MTR_6g012690 42.241 116 65 2 120 234 1 115 2.43e-24 103
MS.gene04496.t1 MTR_5g078910 43.810 105 58 1 131 234 6 110 3.89e-24 102
MS.gene04496.t1 MTR_8g006470 49.020 102 50 2 134 233 12 113 3.98e-24 102
MS.gene04496.t1 MTR_5g079120 41.129 124 69 2 115 234 41 164 7.84e-24 101
MS.gene04496.t1 MTR_1g062940 47.959 98 48 2 132 227 6 102 8.13e-24 99.4
MS.gene04496.t1 MTR_4g121460 42.735 117 63 3 120 234 1 115 9.20e-24 102
MS.gene04496.t1 MTR_0140s0030 36.090 133 84 1 123 254 4 136 1.01e-23 101
MS.gene04496.t1 MTR_0489s0020 36.090 133 84 1 123 254 4 136 1.01e-23 101
MS.gene04496.t1 MTR_5g079290 42.453 106 60 1 134 238 19 124 1.48e-23 99.8
MS.gene04496.t1 MTR_0001s0360 45.833 96 51 1 134 228 9 104 2.37e-23 99.0
MS.gene04496.t1 MTR_1g083630 44.860 107 58 1 129 234 9 115 2.53e-23 103
MS.gene04496.t1 MTR_3g083540 43.689 103 57 1 127 228 36 138 2.65e-23 100
MS.gene04496.t1 MTR_1g110460 41.346 104 60 1 132 234 26 129 2.85e-23 100
MS.gene04496.t1 MTR_7g010210 39.516 124 69 2 123 245 3 121 3.92e-23 100
MS.gene04496.t1 MTR_5g079220 40.000 115 68 1 125 238 14 128 4.42e-23 98.6
MS.gene04496.t1 MTR_7g035075 40.179 112 66 1 134 244 16 127 5.91e-23 96.7
MS.gene04496.t1 MTR_7g010210 39.516 124 69 2 123 245 3 121 6.44e-23 98.2
MS.gene04496.t1 MTR_5g062790 44.248 113 59 3 128 237 5 116 6.67e-23 99.0
MS.gene04496.t1 MTR_5g088640 45.631 103 52 3 134 233 14 115 6.68e-23 98.2
MS.gene04496.t1 MTR_5g088080 45.631 103 52 3 134 233 14 115 7.49e-23 97.8
MS.gene04496.t1 MTR_5g088150 45.631 103 52 3 134 233 14 115 7.49e-23 97.8
MS.gene04496.t1 MTR_5g488210 45.631 103 52 3 134 233 14 115 7.49e-23 97.8
MS.gene04496.t1 MTR_1g076150 37.405 131 79 2 123 251 3 132 7.66e-23 97.8
MS.gene04496.t1 MTR_6g055910 38.525 122 74 1 125 245 7 128 1.33e-22 97.4
MS.gene04496.t1 MTR_5g488170 45.631 103 52 3 134 233 14 115 1.36e-22 96.7
MS.gene04496.t1 MTR_4g097570 38.760 129 75 3 120 245 1 128 1.52e-22 97.8
MS.gene04496.t1 MTR_7g017260 43.269 104 56 1 129 229 22 125 1.85e-22 97.1
MS.gene04496.t1 MTR_1g100667 40.952 105 61 1 134 237 15 119 1.95e-22 97.1
MS.gene04496.t1 MTR_3g039990 38.938 113 68 1 123 234 4 116 2.51e-22 97.4
MS.gene04496.t1 MTR_2g095520 41.964 112 62 3 120 229 1 111 4.00e-22 97.1
MS.gene04496.t1 MTR_5g014990 32.105 190 116 5 120 298 1 188 4.89e-22 96.7
MS.gene04496.t1 MTR_0008s0280 41.837 98 54 2 134 229 14 110 5.06e-22 94.7
MS.gene04496.t1 MTR_0247s0040 44.000 100 55 1 134 232 9 108 6.18e-22 93.2
MS.gene04496.t1 MTR_0063s0090 40.816 98 55 2 134 229 14 110 7.49e-22 94.0
MS.gene04496.t1 MTR_6g006030 46.875 96 48 2 134 227 16 110 8.07e-22 93.6
MS.gene04496.t1 MTR_1g017140 39.231 130 74 4 120 245 1 129 8.95e-22 96.3
MS.gene04496.t1 MTR_5g078950 41.000 100 58 1 134 232 9 108 9.92e-22 94.7
MS.gene04496.t1 MTR_6g012180 40.187 107 63 1 123 228 3 109 1.04e-21 95.9
MS.gene04496.t1 MTR_1g043080 42.857 105 57 2 132 234 12 115 1.09e-21 94.4
MS.gene04496.t1 MTR_4g097570 38.281 128 76 3 120 245 1 127 1.20e-21 95.1
MS.gene04496.t1 MTR_5g078800 42.308 104 59 1 132 234 7 110 1.51e-21 94.4
MS.gene04496.t1 MTR_4g057635 40.171 117 67 3 120 234 1 116 1.57e-21 95.5
MS.gene04496.t1 MTR_5g088610 43.636 110 58 3 128 234 5 113 1.77e-21 95.5
MS.gene04496.t1 MTR_5g078860 41.346 104 60 1 132 234 7 110 2.55e-21 94.4
MS.gene04496.t1 MTR_1g086530 34.028 144 89 3 134 275 35 174 2.92e-21 93.6
MS.gene04496.t1 MTR_2g067420 40.909 110 63 2 121 229 4 112 3.15e-21 94.4
MS.gene04496.t1 MTR_3g103570 39.370 127 73 4 120 244 1 125 3.38e-21 94.7
MS.gene04496.t1 MTR_1g008970 40.602 133 52 2 97 229 81 186 3.59e-21 92.8
MS.gene04496.t1 MTR_5g038910 41.837 98 57 0 137 234 29 126 3.81e-21 95.9
MS.gene04496.t1 MTR_7g087130 37.168 113 70 1 123 234 3 115 7.26e-21 93.6
MS.gene04496.t1 MTR_5g038910 41.837 98 57 0 137 234 29 126 8.95e-21 94.0
MS.gene04496.t1 MTR_1g017000 38.835 103 61 2 134 234 14 116 9.52e-21 91.7
MS.gene04496.t1 MTR_2g088170 50.000 106 49 3 132 234 29 133 1.04e-20 94.7
MS.gene04496.t1 MTR_7g061550 31.892 185 114 4 134 312 7 185 1.72e-20 92.8
MS.gene04496.t1 MTR_7g111290 56.452 62 27 0 167 228 6 67 2.14e-20 92.4
MS.gene04496.t1 MTR_0193s0090 36.646 161 98 4 134 292 9 167 2.56e-20 89.4
MS.gene04496.t1 MTR_7g102110 36.486 148 83 6 120 261 1 143 3.49e-20 90.5
MS.gene04496.t1 MTR_8g060940 43.158 95 53 1 134 227 9 103 3.55e-20 89.7
MS.gene04496.t1 MTR_5g078930 42.342 111 62 2 134 242 11 121 4.22e-20 89.0
MS.gene04496.t1 MTR_6g090405 37.607 117 70 3 120 234 1 116 4.24e-20 89.7
MS.gene04496.t1 MTR_8g468380 38.776 98 60 0 137 234 25 122 4.42e-20 92.4
MS.gene04496.t1 MTR_4g128190 42.056 107 49 3 132 237 11 105 5.46e-20 89.0
MS.gene04496.t1 MTR_1g086510 39.252 107 64 1 134 239 23 129 4.27e-19 87.0
MS.gene04496.t1 MTR_4g128670 40.179 112 64 3 120 229 1 111 4.60e-19 88.6
MS.gene04496.t1 MTR_4g063100 46.575 73 39 0 167 239 14 86 1.13e-18 85.1
MS.gene04496.t1 MTR_2g033170 41.414 99 57 1 130 227 22 120 3.58e-18 85.5
MS.gene04496.t1 MTR_6g055910 41.772 79 46 0 167 245 21 99 5.70e-18 83.6
MS.gene04496.t1 MTR_3g045430 36.923 130 77 4 131 258 11 137 8.85e-18 84.0
MS.gene04496.t1 MTR_7g109320 44.444 117 61 3 120 234 1 115 1.07e-17 84.7
MS.gene04496.t1 MTR_7g035300 37.963 108 59 3 170 276 101 201 1.21e-17 82.4
MS.gene04496.t1 MTR_2g096380 41.975 81 47 0 167 247 23 103 5.32e-17 80.1
MS.gene04496.t1 MTR_4g123040 41.237 97 56 1 132 227 24 120 7.99e-17 81.3
MS.gene04496.t1 MTR_5g007300 40.260 77 45 1 132 207 64 140 1.78e-14 70.9
MS.gene04496.t1 MTR_1g085880 40.566 106 60 3 132 234 11 116 4.02e-14 71.2
MS.gene04496.t1 MTR_1g085770 40.000 100 58 2 137 234 17 116 1.23e-13 72.0
MS.gene04496.t1 MTR_6g080360 37.113 97 60 1 131 227 476 571 2.04e-13 73.2
MS.gene04496.t1 MTR_6g080360 36.275 102 64 1 126 227 522 622 9.04e-12 67.8
MS.gene04496.t1 MTR_6g080360 37.113 97 60 1 131 227 256 351 4.90e-13 71.6
MS.gene04496.t1 MTR_6g080360 36.275 102 64 1 126 227 302 402 1.89e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene04496.t1 AT5G11050 39.073 453 187 13 23 442 16 412 1.98e-81 258
MS.gene04496.t1 AT5G58850 37.885 454 203 13 23 442 11 419 1.76e-76 245
MS.gene04496.t1 AT4G18770 66.667 138 41 1 125 262 208 340 6.91e-60 202
MS.gene04496.t1 AT3G27785 60.135 148 46 2 122 263 177 317 1.84e-54 187
MS.gene04496.t1 AT5G40360 54.615 130 56 1 134 263 158 284 1.60e-47 167
MS.gene04496.t1 AT3G09370 47.368 171 79 3 125 290 134 298 6.24e-41 153
MS.gene04496.t1 AT3G09370 47.368 171 79 3 125 290 126 290 6.47e-41 152
MS.gene04496.t1 AT3G09370 47.368 171 79 3 125 290 121 285 7.74e-41 152
MS.gene04496.t1 AT5G02320 60.909 110 43 0 125 234 118 227 1.07e-40 153
MS.gene04496.t1 AT5G02320 60.909 110 43 0 125 234 118 227 1.07e-40 153
MS.gene04496.t1 AT5G02320 60.714 112 44 0 123 234 56 167 1.17e-40 152
MS.gene04496.t1 AT2G25230 46.667 150 72 3 115 263 8 150 2.67e-38 139
MS.gene04496.t1 AT5G11510 52.679 112 53 0 123 234 70 181 8.33e-37 144
MS.gene04496.t1 AT5G11510 52.679 112 53 0 123 234 70 181 8.33e-37 144
MS.gene04496.t1 AT5G11510 52.679 112 53 0 123 234 70 181 8.33e-37 144
MS.gene04496.t1 AT5G11510 52.679 112 53 0 123 234 70 181 8.60e-37 144
MS.gene04496.t1 AT5G11510 52.679 112 53 0 123 234 70 181 8.98e-37 144
MS.gene04496.t1 AT4G32730 51.818 110 53 0 125 234 78 187 6.45e-36 141
MS.gene04496.t1 AT4G32730 51.818 110 53 0 125 234 78 187 6.45e-36 141
MS.gene04496.t1 AT4G32730 51.818 110 53 0 125 234 78 187 6.45e-36 141
MS.gene04496.t1 AT4G32730 51.818 110 53 0 125 234 78 187 6.45e-36 141
MS.gene04496.t1 AT4G32730 51.786 112 54 0 123 234 76 187 7.75e-36 140
MS.gene04496.t1 AT5G40430 44.604 139 71 3 125 263 45 177 2.85e-35 131
MS.gene04496.t1 AT3G55730 53.846 104 48 0 131 234 53 156 2.51e-32 127
MS.gene04496.t1 AT3G28470 37.500 208 118 6 123 322 3 206 9.26e-32 124
MS.gene04496.t1 AT1G17950 35.829 187 112 3 134 318 5 185 4.67e-31 120
MS.gene04496.t1 AT4G00540 55.357 112 47 1 126 234 95 206 6.06e-31 123
MS.gene04496.t1 AT1G69560 43.885 139 75 1 115 250 88 226 1.33e-30 120
MS.gene04496.t1 AT1G69560 43.885 139 75 1 115 250 104 242 1.36e-30 121
MS.gene04496.t1 AT4G00540 55.357 112 47 1 126 234 93 204 1.55e-30 122
MS.gene04496.t1 AT1G09540 37.356 174 105 3 132 303 12 183 3.41e-30 120
MS.gene04496.t1 AT3G09230 50.980 102 50 0 133 234 54 155 4.51e-30 120
MS.gene04496.t1 AT1G66230 37.438 203 118 7 120 318 1 198 1.36e-29 117
MS.gene04496.t1 AT5G26660 48.276 116 56 3 132 245 12 125 1.71e-29 118
MS.gene04496.t1 AT3G50060 46.154 104 56 0 133 236 5 108 3.76e-29 116
MS.gene04496.t1 AT1G57560 49.524 105 50 2 132 234 12 115 6.67e-29 115
MS.gene04496.t1 AT1G57560 49.524 105 50 2 132 234 12 115 6.68e-29 115
MS.gene04496.t1 AT1G26780 48.246 114 56 1 132 242 96 209 9.07e-29 114
MS.gene04496.t1 AT2G39880 49.038 104 53 0 131 234 47 150 9.68e-29 116
MS.gene04496.t1 AT5G67300 47.059 102 54 0 133 234 5 106 1.01e-28 115
MS.gene04496.t1 AT1G26780 48.246 114 56 1 132 242 96 209 1.11e-28 116
MS.gene04496.t1 AT3G12720 46.602 103 52 2 134 234 24 125 1.23e-28 115
MS.gene04496.t1 AT4G37260 47.115 104 55 0 133 236 12 115 1.49e-28 115
MS.gene04496.t1 AT3G11440 43.077 130 66 3 109 236 24 147 1.72e-28 117
MS.gene04496.t1 AT1G63910 42.623 122 64 2 134 254 14 130 2.19e-28 115
MS.gene04496.t1 AT4G33450 49.074 108 52 1 131 235 16 123 2.35e-28 112
MS.gene04496.t1 AT3G29020 43.333 120 68 0 134 253 65 184 3.30e-28 112
MS.gene04496.t1 AT1G18570 43.750 128 70 2 122 248 3 129 4.64e-28 114
MS.gene04496.t1 AT3G13890 45.098 102 55 1 134 234 14 115 4.72e-28 114
MS.gene04496.t1 AT3G11440 43.077 130 66 3 109 236 24 147 5.48e-28 117
MS.gene04496.t1 AT3G11440 43.077 130 66 3 109 236 24 147 5.48e-28 117
MS.gene04496.t1 AT3G11440 43.077 130 66 3 109 236 24 147 5.48e-28 117
MS.gene04496.t1 AT4G26930 42.975 121 57 2 114 233 12 121 6.44e-28 114
MS.gene04496.t1 AT4G01680 46.154 104 55 1 132 234 12 115 6.61e-28 113
MS.gene04496.t1 AT4G05100 43.966 116 64 1 120 234 1 116 7.49e-28 113
MS.gene04496.t1 AT4G28110 46.667 105 55 1 134 237 14 118 7.92e-28 112
MS.gene04496.t1 AT4G01680 46.154 104 55 1 132 234 12 115 1.04e-27 110
MS.gene04496.t1 AT2G23290 47.115 104 55 0 133 236 12 115 1.05e-27 112
MS.gene04496.t1 AT3G29020 43.333 120 68 0 134 253 67 186 1.31e-27 112
MS.gene04496.t1 AT4G12350 44.444 117 61 3 120 234 1 115 1.65e-27 111
MS.gene04496.t1 AT5G35550 41.353 133 71 2 113 244 1 127 2.94e-27 110
MS.gene04496.t1 AT3G13890 42.342 111 54 2 134 234 14 124 3.66e-27 112
MS.gene04496.t1 AT1G74430 40.625 128 74 2 131 257 11 137 3.97e-27 110
MS.gene04496.t1 AT5G16770 43.103 116 64 2 120 234 1 115 4.03e-27 111
MS.gene04496.t1 AT5G16770 43.103 116 64 2 120 234 1 115 4.03e-27 111
MS.gene04496.t1 AT5G14750 48.454 97 49 1 134 229 18 114 4.21e-27 108
MS.gene04496.t1 AT4G21440 46.154 104 55 1 132 234 12 115 4.51e-27 111
MS.gene04496.t1 AT5G16770 43.103 116 64 2 120 234 1 115 5.87e-27 110
MS.gene04496.t1 AT5G16770 43.103 116 64 2 120 234 1 115 5.87e-27 110
MS.gene04496.t1 AT4G22680 35.437 206 125 5 120 323 1 200 8.10e-27 108
MS.gene04496.t1 AT5G06100 47.222 108 55 2 131 236 31 138 9.66e-27 112
MS.gene04496.t1 AT5G17800 45.217 115 61 1 134 246 93 207 1.01e-26 110
MS.gene04496.t1 AT4G38620 46.602 103 52 2 134 234 14 115 1.03e-26 108
MS.gene04496.t1 AT4G01680 43.103 116 53 2 132 234 12 127 1.04e-26 110
MS.gene04496.t1 AT5G10280 44.444 117 61 3 120 234 1 115 1.51e-26 109
MS.gene04496.t1 AT3G02940 43.103 116 64 2 120 234 1 115 1.81e-26 108
MS.gene04496.t1 AT5G06100 47.222 108 55 2 131 236 31 138 2.15e-26 112
MS.gene04496.t1 AT5G06100 47.222 108 55 2 131 236 31 138 2.15e-26 112
MS.gene04496.t1 AT5G06100 47.222 108 55 2 131 236 31 138 2.15e-26 112
MS.gene04496.t1 AT5G06100 47.222 108 55 2 131 236 31 138 2.15e-26 112
MS.gene04496.t1 AT5G65230 44.444 117 61 3 120 234 1 115 2.34e-26 108
MS.gene04496.t1 AT3G61250 44.444 117 61 3 120 234 1 115 2.68e-26 108
MS.gene04496.t1 AT5G12870 46.078 102 54 1 134 234 20 121 2.70e-26 107
MS.gene04496.t1 AT3G02940 43.103 116 64 2 120 234 1 115 2.76e-26 108
MS.gene04496.t1 AT3G02940 43.103 116 64 2 120 234 1 115 2.76e-26 108
MS.gene04496.t1 AT5G40330 32.961 179 98 3 134 311 14 171 2.91e-26 106
MS.gene04496.t1 AT1G35515 34.810 158 94 3 134 282 14 171 2.97e-26 105
MS.gene04496.t1 AT5G15310 45.455 110 58 2 120 228 1 109 3.18e-26 107
MS.gene04496.t1 AT5G15310 43.103 116 64 2 120 234 1 115 3.42e-26 108
MS.gene04496.t1 AT3G08500 47.115 104 54 1 132 234 30 133 3.51e-26 108
MS.gene04496.t1 AT5G15310 43.103 116 64 2 120 234 1 115 3.73e-26 108
MS.gene04496.t1 AT3G53200 32.995 197 118 4 131 320 8 197 4.51e-26 106
MS.gene04496.t1 AT1G73410 50.467 107 50 1 134 237 6 112 5.05e-26 106
MS.gene04496.t1 AT5G14340 41.606 137 73 5 120 254 13 144 6.67e-26 106
MS.gene04496.t1 AT2G26960 45.192 104 56 1 131 233 19 122 6.81e-26 109
MS.gene04496.t1 AT1G74080 48.980 98 49 1 132 228 12 109 7.15e-26 107
MS.gene04496.t1 AT1G73410 50.467 107 50 1 134 237 6 112 7.20e-26 104
MS.gene04496.t1 AT5G55020 44.660 103 56 1 132 233 26 128 8.01e-26 110
MS.gene04496.t1 AT3G01140 43.103 116 64 2 120 234 1 115 9.09e-26 107
MS.gene04496.t1 AT5G56110 42.647 136 74 3 134 268 14 146 1.23e-25 107
MS.gene04496.t1 AT2G32460 47.170 106 52 3 132 234 6 110 1.35e-25 109
MS.gene04496.t1 AT2G32460 47.170 106 52 3 132 234 18 122 1.37e-25 109
MS.gene04496.t1 AT4G09460 30.769 182 115 3 134 305 14 194 1.60e-25 104
MS.gene04496.t1 AT4G17785 42.735 117 64 2 120 234 1 116 1.79e-25 107
MS.gene04496.t1 AT4G17785 42.735 117 64 2 120 234 1 116 1.80e-25 107
MS.gene04496.t1 AT3G27920 46.875 96 50 1 134 228 16 111 1.83e-25 104
MS.gene04496.t1 AT1G22640 44.660 103 54 2 134 234 14 115 2.13e-25 104
MS.gene04496.t1 AT1G06180 32.864 213 115 8 120 325 1 192 2.25e-25 104
MS.gene04496.t1 AT3G23250 33.171 205 118 6 120 321 1 189 2.83e-25 105
MS.gene04496.t1 AT5G16600 44.531 128 66 4 120 245 1 125 3.17e-25 105
MS.gene04496.t1 AT3G24310 43.200 125 63 3 134 256 20 138 3.29e-25 104
MS.gene04496.t1 AT5G54230 43.810 105 58 1 134 237 14 118 3.69e-25 105
MS.gene04496.t1 AT3G01140 45.192 104 56 1 132 234 55 158 3.75e-25 106
MS.gene04496.t1 AT3G13540 40.833 120 69 2 127 245 18 136 3.94e-25 103
MS.gene04496.t1 AT5G07690 42.609 115 64 2 120 233 1 114 5.32e-25 105
MS.gene04496.t1 AT5G07700 41.379 116 66 2 120 234 1 115 5.76e-25 105
MS.gene04496.t1 AT5G07700 41.379 116 66 2 120 234 1 115 5.76e-25 105
MS.gene04496.t1 AT5G60890 42.742 124 67 2 134 256 14 134 6.11e-25 104
MS.gene04496.t1 AT5G52600 33.333 192 109 5 134 323 14 188 1.10e-24 101
MS.gene04496.t1 AT1G34670 41.379 116 66 2 120 234 1 115 1.13e-24 105
MS.gene04496.t1 AT5G61420 41.379 116 66 2 120 234 1 115 1.50e-24 104
MS.gene04496.t1 AT4G34990 43.396 106 59 1 134 238 14 119 1.62e-24 102
MS.gene04496.t1 AT5G59780 42.982 114 60 3 134 245 10 120 2.59e-24 101
MS.gene04496.t1 AT3G46130 44.444 108 57 2 134 239 11 117 3.16e-24 101
MS.gene04496.t1 AT5G62320 33.163 196 115 7 121 302 3 196 5.23e-24 100
MS.gene04496.t1 AT2G16720 42.718 103 56 2 134 234 14 115 5.40e-24 101
MS.gene04496.t1 AT2G26950 41.667 108 54 2 131 233 15 118 5.92e-24 103
MS.gene04496.t1 AT3G48920 36.129 155 92 3 134 285 20 170 7.26e-24 100
MS.gene04496.t1 AT2G47190 44.118 102 56 1 134 234 22 123 1.94e-23 99.8
MS.gene04496.t1 AT1G18710 41.509 106 61 1 134 238 14 119 1.98e-23 99.8
MS.gene04496.t1 AT3G01530 35.714 168 93 5 134 294 27 186 2.00e-23 97.8
MS.gene04496.t1 AT4G13480 42.400 125 64 3 134 256 8 126 3.69e-23 98.6
MS.gene04496.t1 AT5G62470 36.508 126 80 0 123 248 3 128 3.75e-23 100
MS.gene04496.t1 AT3G60460 48.039 102 51 2 134 233 13 114 4.56e-23 99.4
MS.gene04496.t1 AT3G30210 41.860 129 63 4 134 251 29 156 5.41e-23 98.6
MS.gene04496.t1 AT2G31180 39.231 130 75 3 120 247 1 128 5.45e-23 97.8
MS.gene04496.t1 AT5G39700 44.444 99 55 0 135 233 57 155 9.13e-23 95.9
MS.gene04496.t1 AT5G57620 41.353 133 72 5 120 247 1 132 1.23e-22 98.6
MS.gene04496.t1 AT3G47600 38.938 113 68 1 123 234 3 115 1.28e-22 98.6
MS.gene04496.t1 AT4G25560 44.118 102 56 1 134 234 12 113 1.70e-22 97.4
MS.gene04496.t1 AT5G26660 50.633 79 38 1 167 245 17 94 2.16e-22 97.8
MS.gene04496.t1 AT3G27810 37.410 139 78 2 134 271 22 152 2.19e-22 95.5
MS.gene04496.t1 AT1G74650 39.823 113 67 1 123 234 3 115 2.29e-22 97.8
MS.gene04496.t1 AT5G23000 41.880 117 65 3 120 234 1 116 2.81e-22 97.4
MS.gene04496.t1 AT1G48000 34.641 153 91 2 134 285 34 178 5.64e-22 94.7
MS.gene04496.t1 AT1G08810 34.228 149 96 2 123 269 3 151 7.22e-22 95.5
MS.gene04496.t1 AT5G35550 48.718 78 40 0 167 244 53 130 7.70e-22 95.1
MS.gene04496.t1 AT5G49330 41.379 116 66 2 120 234 1 115 7.77e-22 96.7
MS.gene04496.t1 AT1G68320 31.720 186 116 5 132 310 19 200 8.58e-22 95.5
MS.gene04496.t1 AT1G56160 40.777 103 58 2 134 234 16 117 1.10e-21 95.1
MS.gene04496.t1 AT5G62470 36.220 127 80 1 123 248 3 129 1.32e-21 95.9
MS.gene04496.t1 AT5G40350 45.263 95 51 1 134 227 19 113 1.72e-21 92.8
MS.gene04496.t1 AT3G49690 41.129 124 68 4 120 239 1 123 1.77e-21 95.1
MS.gene04496.t1 AT3G62610 41.379 116 66 2 120 234 1 115 1.86e-21 95.5
MS.gene04496.t1 AT1G25340 44.660 103 54 2 134 234 20 121 2.61e-21 94.0
MS.gene04496.t1 AT3G28910 42.056 107 61 1 123 228 3 109 2.92e-21 94.7
MS.gene04496.t1 AT1G79180 37.097 124 69 3 113 234 1 117 4.79e-21 93.6
MS.gene04496.t1 AT1G16490 36.923 130 73 3 113 240 1 123 6.20e-21 92.8
MS.gene04496.t1 AT5G65790 41.129 124 68 4 120 239 1 123 6.37e-21 94.4
MS.gene04496.t1 AT1G66370 38.211 123 70 2 120 241 1 118 8.72e-21 91.7
MS.gene04496.t1 AT2G47460 39.655 116 68 2 120 234 1 115 1.29e-20 93.6
MS.gene04496.t1 AT1G14350 39.796 98 59 0 137 234 28 125 1.51e-20 94.0
MS.gene04496.t1 AT1G14350 39.796 98 59 0 137 234 28 125 1.51e-20 94.0
MS.gene04496.t1 AT1G25340 41.584 101 55 1 134 234 20 116 1.62e-20 91.7
MS.gene04496.t1 AT2G02820 40.816 98 58 0 137 234 33 130 1.67e-20 94.4
MS.gene04496.t1 AT5G52260 35.393 178 99 5 121 296 5 168 2.10e-20 90.9
MS.gene04496.t1 AT2G02820 43.956 91 51 0 137 227 33 123 2.23e-20 93.6
MS.gene04496.t1 AT2G02820 43.956 91 51 0 137 227 33 123 2.61e-20 92.0
MS.gene04496.t1 AT5G49620 29.018 224 138 4 134 344 28 243 2.92e-20 91.3
MS.gene04496.t1 AT3G12820 37.815 119 71 2 122 238 4 121 3.25e-20 89.7
MS.gene04496.t1 AT1G25340 41.584 101 55 1 134 234 20 116 3.91e-20 90.9
MS.gene04496.t1 AT4G37780 35.897 117 72 3 120 234 1 116 5.08e-20 90.5
MS.gene04496.t1 AT5G14750 50.794 63 31 0 167 229 18 80 6.20e-20 87.0
MS.gene04496.t1 AT2G37630 35.036 137 84 2 136 267 6 142 7.84e-20 91.3
MS.gene04496.t1 AT1G66380 46.078 102 54 1 128 228 4 105 1.18e-19 85.5
MS.gene04496.t1 AT3G53200 32.704 159 96 2 167 320 12 164 1.38e-19 87.0
MS.gene04496.t1 AT1G56650 45.631 103 55 1 128 229 4 106 2.71e-19 87.4
MS.gene04496.t1 AT1G66390 46.078 102 54 1 128 228 4 105 1.57e-18 85.1
MS.gene04496.t1 AT3G06490 43.878 98 52 2 132 227 19 115 2.04e-18 86.3
MS.gene04496.t1 AT3G27810 39.048 105 56 1 167 271 7 103 8.51e-18 81.3
MS.gene04496.t1 AT1G79180 31.852 135 58 2 134 234 16 150 9.03e-18 84.3
MS.gene04496.t1 AT2G36890 36.752 117 71 3 120 234 1 116 1.59e-17 83.2
MS.gene04496.t1 AT5G59780 44.304 79 42 1 167 245 23 99 2.84e-17 80.9
MS.gene04496.t1 AT2G36890 36.752 117 71 3 120 234 42 157 3.47e-17 82.8
MS.gene04496.t1 AT5G40350 52.459 61 29 0 167 227 8 68 5.12e-17 79.0
MS.gene04496.t1 AT3G46130 45.205 73 40 0 167 239 13 85 6.29e-17 80.1
MS.gene04496.t1 AT3G46130 45.205 73 40 0 167 239 23 95 6.85e-17 80.1
MS.gene04496.t1 AT5G49620 27.311 238 138 5 134 344 28 257 7.03e-17 81.6
MS.gene04496.t1 AT3G47600 47.059 68 36 0 167 234 42 109 7.10e-17 81.6
MS.gene04496.t1 AT3G12820 44.444 72 40 0 167 238 2 73 7.84e-16 76.3
MS.gene04496.t1 AT3G18100 36.735 98 60 2 131 227 492 588 9.44e-15 77.0
MS.gene04496.t1 AT3G18100 36.170 94 60 0 134 227 546 639 5.83e-14 74.7
MS.gene04496.t1 AT1G22640 47.368 57 30 0 178 234 2 58 1.18e-14 72.8
MS.gene04496.t1 AT3G18100 36.735 98 60 2 131 227 444 540 1.48e-14 76.6
MS.gene04496.t1 AT3G18100 36.170 94 60 0 134 227 498 591 8.51e-14 74.3
MS.gene04496.t1 AT3G18100 36.735 98 60 2 131 227 331 427 1.73e-14 76.3
MS.gene04496.t1 AT3G18100 36.170 94 60 0 134 227 385 478 9.74e-14 73.9
MS.gene04496.t1 AT1G71030 40.000 65 39 0 170 234 5 69 1.83e-14 72.0
MS.gene04496.t1 AT1G71030 40.000 65 39 0 170 234 19 83 2.09e-14 72.0
MS.gene04496.t1 AT3G18100 36.735 98 60 2 131 227 279 375 2.32e-14 75.9
MS.gene04496.t1 AT3G18100 36.170 94 60 0 134 227 333 426 1.28e-13 73.6
MS.gene04496.t1 AT5G14750 39.706 68 41 0 178 245 2 69 3.15e-14 70.1
MS.gene04496.t1 AT5G14750 39.706 68 41 0 178 245 2 69 3.15e-14 70.1
MS.gene04496.t1 AT3G23250 31.724 145 84 3 178 321 2 132 4.24e-14 72.0
MS.gene04496.t1 AT1G66380 49.206 63 32 0 167 229 11 73 7.61e-13 65.1
MS.gene04496.t1 AT1G14350 43.333 60 34 0 175 234 23 82 1.86e-11 65.9
MS.gene04496.t1 AT1G14350 43.333 60 34 0 175 234 23 82 1.86e-11 65.9

Find 100 sgRNAs with CRISPR-Local

Find 197 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAATTTGGTTTAGGGTAAT+TGG 0.152939 3.4:+58801838 None:intergenic
CTGCCATTGATAGATTCTTA+TGG 0.247531 3.4:-58804776 MS.gene04496:CDS
AGGGTTTGAAGAGGGTTTCT+TGG 0.262586 3.4:+58801937 None:intergenic
GAATCTGATTACTGTTAGTT+TGG 0.268681 3.4:+58801903 None:intergenic
TTCTTGGAGTAGGGGTTAAC+AGG 0.288498 3.4:+58801953 None:intergenic
GAAGGTAGTGATCAGAATTA+AGG 0.315331 3.4:+58801768 None:intergenic
GAAGAGGGTTTCTTGGAGTA+GGG 0.325395 3.4:+58801944 None:intergenic
TTTAGGGTAATTGGAAAGAT+TGG 0.329995 3.4:+58801847 None:intergenic
ATCATTGGAATGCAACAAAA+AGG 0.334346 3.4:-58802285 MS.gene04496:CDS
GAAGAGAGAGATGGATTTGT+TGG 0.339685 3.4:-58801672 MS.gene04496:CDS
TGCCATTGATAGATTCTTAT+GGG 0.346398 3.4:-58804775 MS.gene04496:CDS
GACATCATATTATTATTATT+AGG 0.352512 3.4:+58804648 None:intergenic
ATTGCATTCTCAGTTCTTCC+TGG 0.352568 3.4:+58802313 None:intergenic
CTCCCTGATGTTACTGATTG+TGG 0.355914 3.4:-58801881 MS.gene04496:CDS
TAGCTTTGTTGATCAGCTAT+TGG 0.363373 3.4:-58804616 MS.gene04496:CDS
AGAGATGGATTTGTTGGAGT+TGG 0.366710 3.4:-58801666 MS.gene04496:CDS
GATCAAAATATTTATAGCTT+TGG 0.368101 3.4:-58804705 MS.gene04496:CDS
GAAAATTTCATGAAACCAAT+TGG 0.372690 3.4:-58804864 None:intergenic
GAAGATGCGATCAATGGTTT+AGG 0.381677 3.4:-58804537 MS.gene04496:CDS
AAGTGACATACTTTGATATC+AGG 0.394233 3.4:+58803767 None:intergenic
ATTAGGCCACATAAAACTAT+AGG 0.401368 3.4:+58804665 None:intergenic
AATCTGATTACTGTTAGTTT+GGG 0.404398 3.4:+58801904 None:intergenic
ATCACCAACCACTCTTCTAT+TGG 0.413518 3.4:-58804810 MS.gene04496:CDS
TTAGTTTGGGAAGAATAGTA+AGG 0.415895 3.4:+58801917 None:intergenic
AGCAATATGGTGTAAGAAAA+TGG 0.419388 3.4:-58803862 MS.gene04496:CDS
CCACCAATACGTACTCCAAT+TGG 0.419604 3.4:+58804849 None:intergenic
AGAATGCAATAAAGAATCAT+TGG 0.427236 3.4:-58802300 MS.gene04496:CDS
GAGATAGCAAAGAGAATTCC+AGG 0.427432 3.4:-58802331 MS.gene04496:CDS
TGAAGAGGGTTTCTTGGAGT+AGG 0.427723 3.4:+58801943 None:intergenic
AACAATGTGGAGTTGCATCT+TGG 0.428463 3.4:-58801716 MS.gene04496:CDS
CTGAAGTTGGTGAAGCAATA+TGG 0.437823 3.4:-58803875 MS.gene04496:CDS
ACAATGTGGAGTTGCATCTT+GGG 0.440360 3.4:-58801715 MS.gene04496:CDS
CAAATGAAGAGGTGATGAAT+TGG 0.443517 3.4:-58804593 MS.gene04496:CDS
GTCTCAAATAGCTGAGAAGT+TGG 0.449298 3.4:-58803840 MS.gene04496:CDS
GTAGAAACTCATGGCATGAT+TGG 0.452723 3.4:-58802367 MS.gene04496:CDS
AAGGAAGATTGGTTTGAAGA+AGG 0.458004 3.4:+58802088 None:intergenic
GGAGTAGGGGTTAACAGGTT+CGG 0.458012 3.4:+58801958 None:intergenic
ACATGTTGCAGAAAGATAGT+TGG 0.459027 3.4:-58802414 MS.gene04496:intron
ATTCAAGGAGAAAGAACAAA+AGG 0.472167 3.4:-58802255 MS.gene04496:CDS
GAATTAAGGTAATTCATCAT+AGG 0.473352 3.4:+58801782 None:intergenic
AGGAAGATTGGTTTGAAGAA+GGG 0.477815 3.4:+58802089 None:intergenic
TTCTGAATTCCATTCAGCAT+TGG 0.479415 3.4:+58801743 None:intergenic
AATCCACAATCAGTAACATC+AGG 0.481489 3.4:+58801878 None:intergenic
TCAAAGGAAATTGCTGAAGT+TGG 0.481875 3.4:-58803888 MS.gene04496:intron
TCTTTCTCCACACACAATGA+AGG 0.482009 3.4:+58804558 None:intergenic
TACCTTCCTCCAATGCTGAA+TGG 0.484131 3.4:-58801752 MS.gene04496:CDS
GGAAAGGGTGCAAAAGTGGT+TGG 0.491374 3.4:-58804516 MS.gene04496:CDS
TGAATTCCATTCAGCATTGG+AGG 0.495675 3.4:+58801746 None:intergenic
GAATAGTAAGGGTTTGAAGA+GGG 0.496870 3.4:+58801929 None:intergenic
GAGAAGTTGGAAGGAAGAGC+TGG 0.505174 3.4:-58803827 MS.gene04496:CDS
GGTTTACCATCAGTGGTTTG+AGG 0.505708 3.4:+58802232 None:intergenic
GAAAGCAGTGTAGGGAAAGA+TGG 0.507446 3.4:-58803805 MS.gene04496:CDS
TTTAGGAAAGGGTGCAAAAG+TGG 0.509549 3.4:-58804520 MS.gene04496:CDS
TGAAAAGTTGTTGCATGAAG+AGG 0.512671 3.4:+58801996 None:intergenic
TGGCATGATTGGAAACCGTT+GGG 0.512956 3.4:-58802356 MS.gene04496:CDS
GTTGGAGTGAAGAAGAAGAA+AGG 0.512967 3.4:-58802396 MS.gene04496:CDS
AAACCAATTGGAGTACGTAT+TGG 0.519717 3.4:-58804852 MS.gene04496:CDS
GCGATCAATGGTTTAGGAAA+GGG 0.521321 3.4:-58804531 MS.gene04496:CDS
GAAGAGCTGGAAAGCAGTGT+AGG 0.523888 3.4:-58803814 MS.gene04496:CDS
ATGGCATGATTGGAAACCGT+TGG 0.528169 3.4:-58802357 MS.gene04496:CDS
AAGAGGGTTTCTTGGAGTAG+GGG 0.530916 3.4:+58801945 None:intergenic
AGTCCACTGTCCTTTGATCA+AGG 0.536979 3.4:+58804464 None:intergenic
CCAATTGGAGTACGTATTGG+TGG 0.542694 3.4:-58804849 MS.gene04496:CDS
AAGAGCTGGAAAGCAGTGTA+GGG 0.544280 3.4:-58803813 MS.gene04496:CDS
AGATTGTGGTTTACCATCAG+TGG 0.552835 3.4:+58802225 None:intergenic
AGTAGTAGTAGCAGTAGTAC+CGG 0.553178 3.4:+58802153 None:intergenic
TGCGATCAATGGTTTAGGAA+AGG 0.553524 3.4:-58804532 MS.gene04496:CDS
GAGAAAGAAGATGCGATCAA+TGG 0.556688 3.4:-58804543 MS.gene04496:CDS
AGAATAGTAAGGGTTTGAAG+AGG 0.556843 3.4:+58801928 None:intergenic
GGGAATATGAATTTCTCAGA+GGG 0.558195 3.4:-58801695 MS.gene04496:CDS
TCTTGAAGAATAGAAGATTG+TGG 0.558587 3.4:+58802211 None:intergenic
ACCCCATAAGAATCTATCAA+TGG 0.560596 3.4:+58804773 None:intergenic
TTCCATTCAGCATTGGAGGA+AGG 0.564838 3.4:+58801750 None:intergenic
ACAAATTCCTTCATTGTGTG+TGG 0.567848 3.4:-58804565 MS.gene04496:CDS
TCATAAGATTCAGATATAAG+TGG 0.570449 3.4:+58802028 None:intergenic
CTCAGAGGGGAAGAGAGAGA+TGG 0.571224 3.4:-58801681 MS.gene04496:CDS
AATCTATCAATGGCAGTCAA+AGG 0.571369 3.4:+58804783 None:intergenic
CAAATAGCTGAGAAGTTGGA+AGG 0.580510 3.4:-58803836 MS.gene04496:CDS
TAGTTTGGGAAGAATAGTAA+GGG 0.586373 3.4:+58801918 None:intergenic
AGTAGTAGCAGTAGTACCGG+TGG 0.586523 3.4:+58802156 None:intergenic
GTCCTCAGAGATCGCTGACA+CGG 0.599223 3.4:+58802111 None:intergenic
AGTGGACTGATGAAGAAGAC+AGG 0.601588 3.4:-58804449 MS.gene04496:intron
AGGACCAATAGAAGAGTGGT+TGG 0.605891 3.4:+58804806 None:intergenic
TTTCCTTGATCAAAGGACAG+TGG 0.611527 3.4:-58804467 MS.gene04496:CDS
TCTTTGCTATCTCCGCCCAA+CGG 0.615526 3.4:+58802341 None:intergenic
AAGGTAATTCATCATAGGTG+TGG 0.625090 3.4:+58801787 None:intergenic
AAAAGGCCTCAAACCACTGA+TGG 0.628725 3.4:-58802238 MS.gene04496:CDS
TCAGCTATTGGCAAATGAAG+AGG 0.629014 3.4:-58804604 MS.gene04496:CDS
CATGATTGGAAACCGTTGGG+CGG 0.641685 3.4:-58802353 MS.gene04496:CDS
GCCATTGATAGATTCTTATG+GGG 0.643647 3.4:-58804774 MS.gene04496:CDS
ATCCACAATCAGTAACATCA+GGG 0.650690 3.4:+58801879 None:intergenic
CTATCAATGGCAGTCAAAGG+AGG 0.652795 3.4:+58804786 None:intergenic
AAAGATGGCATAATCATCTG+AGG 0.662817 3.4:-58803790 MS.gene04496:CDS
CTCCGTGTCAGCGATCTCTG+AGG 0.667016 3.4:-58802113 MS.gene04496:CDS
AAGGAGGACCAATAGAAGAG+TGG 0.673968 3.4:+58804802 None:intergenic
TGGGAATATGAATTTCTCAG+AGG 0.674443 3.4:-58801696 MS.gene04496:CDS
AGGATGCTAGTAGAAACTCA+TGG 0.688422 3.4:-58802376 MS.gene04496:CDS
GGAATATGAATTTCTCAGAG+GGG 0.702999 3.4:-58801694 MS.gene04496:CDS
ATTGGAGTACGTATTGGTGG+TGG 0.703614 3.4:-58804846 MS.gene04496:CDS
AATTCAGAATCAGAACAATG+TGG 0.714283 3.4:-58801729 MS.gene04496:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTTTAATAATATATATT+TGG - chr3.4:58802432-58802451 MS.gene04496:intron 0.0%
!!! TTTTTTTAATAATATATATT+TGG - chr3.4:58802401-58802420 MS.gene04496:CDS 0.0%
!! AAATATATTGAAAAAATTGA+AGG + chr3.4:58802764-58802783 None:intergenic 10.0%
!!! AAAATATAACTAAATTTTCT+AGG + chr3.4:58803238-58803257 None:intergenic 10.0%
!!! AAAATTTTTTAATTGTCTTT+TGG - chr3.4:58803681-58803700 MS.gene04496:intron 10.0%
!!! GTCTTTTAATAATATATATT+TGG - chr3.4:58802546-58802565 MS.gene04496:intron 10.0%
!!! TTTTTATGATATTATATACT+TGG - chr3.4:58802242-58802261 MS.gene04496:CDS 10.0%
!! GACATCATATTATTATTATT+AGG + chr3.4:58801853-58801872 None:intergenic 15.0%
!! TTTATATTTACTTATCGATA+TGG - chr3.4:58803926-58803945 MS.gene04496:intron 15.0%
!!! AAATCATAGATAAATTTTCA+AGG + chr3.4:58802908-58802927 None:intergenic 15.0%
!!! ATATTTATCTTTTAAACTCT+TGG - chr3.4:58803332-58803351 MS.gene04496:intron 15.0%
!!! GTCTTGTTATATAAAAAAAA+TGG - chr3.4:58802468-58802487 MS.gene04496:intron 15.0%
!!! TAAATATAAAGAGTATACTA+AGG + chr3.4:58803916-58803935 None:intergenic 15.0%
!!! TATATTTGGACTAAATTTTA+AGG - chr3.4:58802446-58802465 MS.gene04496:intron 15.0%
!!! TATTTATCTTTTAAACTCTT+GGG - chr3.4:58803333-58803352 MS.gene04496:intron 15.0%
!!! TTGTTGTTATATAAAATCAA+AGG - chr3.4:58802594-58802613 MS.gene04496:intron 15.0%
!! ATTCATGTGAATGATAAATT+TGG + chr3.4:58803063-58803082 None:intergenic 20.0%
!! GATCAAAATATTTATAGCTT+TGG - chr3.4:58801793-58801812 MS.gene04496:CDS 20.0%
!!! TATATTTGGGCTAAATTTTA+AGG - chr3.4:58802560-58802579 MS.gene04496:intron 20.0%
!!! TGTTCTATATTTTTTTTGAG+AGG + chr3.4:58802854-58802873 None:intergenic 20.0%
! AAACACTCAAACAACAATTA+GGG + chr3.4:58802088-58802107 None:intergenic 25.0%
! AGAATGCAATAAAGAATCAT+TGG - chr3.4:58804198-58804217 MS.gene04496:intron 25.0%
! ATGACAATAAATCCAAACTA+GGG + chr3.4:58803503-58803522 None:intergenic 25.0%
! ATGCAAGTCAATGATAAATT+TGG + chr3.4:58803414-58803433 None:intergenic 25.0%
! GAAACTTGGAAAAAAAAGTA+CGG + chr3.4:58803984-58804003 None:intergenic 25.0%
! GAATTAAGGTAATTCATCAT+AGG + chr3.4:58804719-58804738 None:intergenic 25.0%
! GTCAAAGATTAATACATACA+AGG - chr3.4:58803371-58803390 MS.gene04496:intron 25.0%
! TAGAAAAAACAAAGGAAGAT+TGG + chr3.4:58804424-58804443 None:intergenic 25.0%
! TATACTTGGACTAAATTTGA+AGG - chr3.4:58802256-58802275 MS.gene04496:CDS 25.0%
! TATGACAATAAATCCAAACT+AGG + chr3.4:58803504-58803523 None:intergenic 25.0%
! TCATAAGATTCAGATATAAG+TGG + chr3.4:58804473-58804492 None:intergenic 25.0%
!! AATCTGATTACTGTTAGTTT+GGG + chr3.4:58804597-58804616 None:intergenic 25.0%
!! TTTGTTGAAGTTTCTTTTGA+GGG + chr3.4:58801765-58801784 None:intergenic 25.0%
!! TTTTGTTGAAGTTTCTTTTG+AGG + chr3.4:58801766-58801785 None:intergenic 25.0%
!!! ATTTTTCTAGGATCTATCTT+TGG - chr3.4:58803282-58803301 MS.gene04496:intron 25.0%
!!! CTTTTTTTTCCAAGTTTCTT+CGG - chr3.4:58803986-58804005 MS.gene04496:intron 25.0%
!!! GCATCTAATTTGATTTTTCT+AGG - chr3.4:58803270-58803289 MS.gene04496:intron 25.0%
!!! TACATGTTGTTTTGTGAATT+TGG + chr3.4:58804677-58804696 None:intergenic 25.0%
!!! TGTTTTGTGAATTTGGTTTA+GGG + chr3.4:58804670-58804689 None:intergenic 25.0%
!!! TTGGTGTTACTTTTAAACAA+AGG - chr3.4:58802290-58802309 MS.gene04496:CDS 25.0%
!!! TTGTTTTGTGAATTTGGTTT+AGG + chr3.4:58804671-58804690 None:intergenic 25.0%
!!! TTTGAAGGTGTTTTGTTATT+TGG - chr3.4:58802271-58802290 MS.gene04496:CDS 25.0%
!!! TTTGATAATGCATGTAAATG+CGG - chr3.4:58802160-58802179 MS.gene04496:CDS 25.0%
!!! TTTTTTTTCCAAGTTTCTTC+GGG - chr3.4:58803987-58804006 MS.gene04496:intron 25.0%
AAACCTTGTCAAGGTTATTT+GGG + chr3.4:58803182-58803201 None:intergenic 30.0%
AAGTGACATACTTTGATATC+AGG + chr3.4:58802734-58802753 None:intergenic 30.0%
AATTCAGAATCAGAACAATG+TGG - chr3.4:58804769-58804788 MS.gene04496:CDS 30.0%
AGCAATATGGTGTAAGAAAA+TGG - chr3.4:58802636-58802655 MS.gene04496:intron 30.0%
ATCATTGGAATGCAACAAAA+AGG - chr3.4:58804213-58804232 MS.gene04496:intron 30.0%
ATTAATCCAAACGTGGATTT+AGG + chr3.4:58803146-58803165 None:intergenic 30.0%
ATTAGGCCACATAAAACTAT+AGG + chr3.4:58801836-58801855 None:intergenic 30.0%
ATTCAAGGAGAAAGAACAAA+AGG - chr3.4:58804243-58804262 MS.gene04496:intron 30.0%
CAAAAAGGAGACAAAATTCA+AGG - chr3.4:58804228-58804247 MS.gene04496:intron 30.0%
CAAACACTCAAACAACAATT+AGG + chr3.4:58802089-58802108 None:intergenic 30.0%
CTACTTATGAGAAATATGGA+GGG + chr3.4:58803591-58803610 None:intergenic 30.0%
CTCCATATTTCTCATAAGTA+GGG - chr3.4:58803590-58803609 MS.gene04496:intron 30.0%
GAAAAAGAAGACACTTTCTT+AGG + chr3.4:58802015-58802034 None:intergenic 30.0%
GAATCTGATTACTGTTAGTT+TGG + chr3.4:58804598-58804617 None:intergenic 30.0%
GGAAGTCTAATGTTAGTAAA+TGG - chr3.4:58804008-58804027 MS.gene04496:intron 30.0%
GGATAGGTTAGAAAAAACAA+AGG + chr3.4:58804432-58804451 None:intergenic 30.0%
TAAGACAATTAATCCAAACG+TGG + chr3.4:58803153-58803172 None:intergenic 30.0%
TAGTTTGGGAAGAATAGTAA+GGG + chr3.4:58804583-58804602 None:intergenic 30.0%
TATCCTACTTATGAGAAAAG+TGG + chr3.4:58803209-58803228 None:intergenic 30.0%
TCATTCCATGTTTAGATTCA+CGG - chr3.4:58803857-58803876 MS.gene04496:CDS 30.0%
TCTATATCTTATGAACTTGC+AGG - chr3.4:58803020-58803039 MS.gene04496:intron 30.0%
TCTTGAAGAATAGAAGATTG+TGG + chr3.4:58804290-58804309 None:intergenic 30.0%
TGCAACATGTAAAGTAAGTT+CGG + chr3.4:58804074-58804093 None:intergenic 30.0%
TGCCATTGATAGATTCTTAT+GGG - chr3.4:58801723-58801742 MS.gene04496:CDS 30.0%
! ATGATGAATTTTCATGGGAT+AGG + chr3.4:58804448-58804467 None:intergenic 30.0%
! TCTTCTTTTTCCTTGATCAA+AGG - chr3.4:58802024-58802043 MS.gene04496:CDS 30.0%
! TGAATTTGGTTTAGGGTAAT+TGG + chr3.4:58804663-58804682 None:intergenic 30.0%
! TTAGTTTGGGAAGAATAGTA+AGG + chr3.4:58804584-58804603 None:intergenic 30.0%
! TTTAGGGTAATTGGAAAGAT+TGG + chr3.4:58804654-58804673 None:intergenic 30.0%
!! ACTATATGAAAGTGCTAGAT+TGG - chr3.4:58803754-58803773 MS.gene04496:intron 30.0%
!! TAGCATATGGTTCTAAATTG+CGG - chr3.4:58802113-58802132 MS.gene04496:CDS 30.0%
!! TGGTGATGATGAATTTTCAT+GGG + chr3.4:58804453-58804472 None:intergenic 30.0%
!!! CTTCAACCTATAGTTTTATG+TGG - chr3.4:58801827-58801846 MS.gene04496:CDS 30.0%
AAACCAATTGGAGTACGTAT+TGG - chr3.4:58801646-58801665 MS.gene04496:CDS 35.0%
AAACCCAAATAACCTTGACA+AGG - chr3.4:58803562-58803581 MS.gene04496:intron 35.0%
AAAGATGGCATAATCATCTG+AGG - chr3.4:58802708-58802727 MS.gene04496:intron 35.0%
AAGGTAATTCATCATAGGTG+TGG + chr3.4:58804714-58804733 None:intergenic 35.0%
AATCCACAATCAGTAACATC+AGG + chr3.4:58804623-58804642 None:intergenic 35.0%
AATCTATCAATGGCAGTCAA+AGG + chr3.4:58801718-58801737 None:intergenic 35.0%
ACAAATTCCTTCATTGTGTG+TGG - chr3.4:58801933-58801952 MS.gene04496:CDS 35.0%
ACATGTTGCAGAAAGATAGT+TGG - chr3.4:58804084-58804103 MS.gene04496:intron 35.0%
ACCCCATAAGAATCTATCAA+TGG + chr3.4:58801728-58801747 None:intergenic 35.0%
AGAATAGTAAGGGTTTGAAG+AGG + chr3.4:58804573-58804592 None:intergenic 35.0%
AGGAGAAATGAGAGAAATTG+TGG + chr3.4:58803477-58803496 None:intergenic 35.0%
ATAAATCCAAACTAGGGTTC+AGG + chr3.4:58803497-58803516 None:intergenic 35.0%
ATCCACAATCAGTAACATCA+GGG + chr3.4:58804622-58804641 None:intergenic 35.0%
ATGACTAAATCACACCAACA+AGG - chr3.4:58803623-58803642 MS.gene04496:intron 35.0%
ATTCACCGTGAATCTAAACA+TGG + chr3.4:58803865-58803884 None:intergenic 35.0%
CAAATGAAGAGGTGATGAAT+TGG - chr3.4:58801905-58801924 MS.gene04496:CDS 35.0%
CACCCTACTTATGAGAAATA+TGG + chr3.4:58803595-58803614 None:intergenic 35.0%
CCTACTTATGAGAAATATGG+AGG + chr3.4:58803592-58803611 None:intergenic 35.0%
CCTCCATATTTCTCATAAGT+AGG - chr3.4:58803589-58803608 MS.gene04496:intron 35.0%
CTACTTATGAGAAAAGTGGA+GGG + chr3.4:58803205-58803224 None:intergenic 35.0%
CTGCCATTGATAGATTCTTA+TGG - chr3.4:58801722-58801741 MS.gene04496:CDS 35.0%
GAAACCTTGTCAAGGTTATT+TGG + chr3.4:58803183-58803202 None:intergenic 35.0%
GAAGGTAGTGATCAGAATTA+AGG + chr3.4:58804733-58804752 None:intergenic 35.0%
GAATAGTAAGGGTTTGAAGA+GGG + chr3.4:58804572-58804591 None:intergenic 35.0%
GAGTGTTTGTTTGTAGCATA+TGG - chr3.4:58802100-58802119 MS.gene04496:CDS 35.0%
GCCATTGATAGATTCTTATG+GGG - chr3.4:58801724-58801743 MS.gene04496:CDS 35.0%
GGAATATGAATTTCTCAGAG+GGG - chr3.4:58804804-58804823 MS.gene04496:CDS 35.0%
GGAGAAATGAGAGAAATTGT+GGG + chr3.4:58803476-58803495 None:intergenic 35.0%
GGGAATATGAATTTCTCAGA+GGG - chr3.4:58804803-58804822 MS.gene04496:CDS 35.0%
TCAAAGGAAATTGCTGAAGT+TGG - chr3.4:58802610-58802629 MS.gene04496:intron 35.0%
TGAAAAGTTGTTGCATGAAG+AGG + chr3.4:58804505-58804524 None:intergenic 35.0%
TGGGAATATGAATTTCTCAG+AGG - chr3.4:58804802-58804821 MS.gene04496:CDS 35.0%
TTCTGAATTCCATTCAGCAT+TGG + chr3.4:58804758-58804777 None:intergenic 35.0%
! CTTCATGCAACAACTTTTCA+AGG - chr3.4:58804505-58804524 MS.gene04496:CDS 35.0%
!! AAGGAAGATTGGTTTGAAGA+AGG + chr3.4:58804413-58804432 None:intergenic 35.0%
!! AGGAAGATTGGTTTGAAGAA+GGG + chr3.4:58804412-58804431 None:intergenic 35.0%
!! GTGGTGATGATGAATTTTCA+TGG + chr3.4:58804454-58804473 None:intergenic 35.0%
!! TAGCTTTGTTGATCAGCTAT+TGG - chr3.4:58801882-58801901 MS.gene04496:CDS 35.0%
!! TGAAAGTGCTAGATTGGAAA+TGG - chr3.4:58803760-58803779 MS.gene04496:intron 35.0%
!! TGTCAAGGTTATTTGGGTTT+TGG + chr3.4:58803562-58803581 None:intergenic 35.0%
!!! AAGGTTATTTGGGTTTTGGA+GGG + chr3.4:58803558-58803577 None:intergenic 35.0%
AACAATGTGGAGTTGCATCT+TGG - chr3.4:58804782-58804801 MS.gene04496:CDS 40.0%
AATCCAAACGTGGATTTAGG+AGG + chr3.4:58803143-58803162 None:intergenic 40.0%
ACAATGTGGAGTTGCATCTT+GGG - chr3.4:58804783-58804802 MS.gene04496:CDS 40.0%
ACCTTGTCAAGGTTATTTGG+AGG + chr3.4:58803180-58803199 None:intergenic 40.0%
AGATTGTGGTTTACCATCAG+TGG + chr3.4:58804276-58804295 None:intergenic 40.0%
AGGATGCTAGTAGAAACTCA+TGG - chr3.4:58804122-58804141 MS.gene04496:intron 40.0%
AGTAGTAGTAGCAGTAGTAC+CGG + chr3.4:58804348-58804367 None:intergenic 40.0%
ATCACCAACCACTCTTCTAT+TGG - chr3.4:58801688-58801707 MS.gene04496:CDS 40.0%
ATTCCTCCTAAATCCACGTT+TGG - chr3.4:58803137-58803156 MS.gene04496:intron 40.0%
ATTGCATTCTCAGTTCTTCC+TGG + chr3.4:58804188-58804207 None:intergenic 40.0%
ATTTCTCCTGAACCCTAGTT+TGG - chr3.4:58803488-58803507 MS.gene04496:intron 40.0%
CAAATAGCTGAGAAGTTGGA+AGG - chr3.4:58802662-58802681 MS.gene04496:intron 40.0%
CCTACTTATGAGAAAAGTGG+AGG + chr3.4:58803206-58803225 None:intergenic 40.0%
CCTTGTCAAGGTTATTTGGA+GGG + chr3.4:58803179-58803198 None:intergenic 40.0%
GAAATGAGAGAAATTGTGGG+AGG + chr3.4:58803473-58803492 None:intergenic 40.0%
GAAGATGCGATCAATGGTTT+AGG - chr3.4:58801961-58801980 MS.gene04496:CDS 40.0%
GAGAAAGAAGATGCGATCAA+TGG - chr3.4:58801955-58801974 MS.gene04496:CDS 40.0%
GAGATAGCAAAGAGAATTCC+AGG - chr3.4:58804167-58804186 MS.gene04496:intron 40.0%
GCGATCAATGGTTTAGGAAA+GGG - chr3.4:58801967-58801986 MS.gene04496:CDS 40.0%
GGAATGTGAGAAAATGTTGG+AGG + chr3.4:58803122-58803141 None:intergenic 40.0%
GGAGGAATGTGAGAAAATGT+TGG + chr3.4:58803125-58803144 None:intergenic 40.0%
GTAAGTTCGGAGTCATAAAG+TGG + chr3.4:58804061-58804080 None:intergenic 40.0%
GTAGAAACTCATGGCATGAT+TGG - chr3.4:58804131-58804150 MS.gene04496:intron 40.0%
GTCTCAAATAGCTGAGAAGT+TGG - chr3.4:58802658-58802677 MS.gene04496:intron 40.0%
GTTGGAGTGAAGAAGAAGAA+AGG - chr3.4:58804102-58804121 MS.gene04496:intron 40.0%
TCAGCTATTGGCAAATGAAG+AGG - chr3.4:58801894-58801913 MS.gene04496:CDS 40.0%
TCTTTCTCCACACACAATGA+AGG + chr3.4:58801943-58801962 None:intergenic 40.0%
TGAGTATTTGCACACCTTGT+TGG + chr3.4:58803640-58803659 None:intergenic 40.0%
TGCGATCAATGGTTTAGGAA+AGG - chr3.4:58801966-58801985 MS.gene04496:CDS 40.0%
TTAGACTTCCCGAAGAAACT+TGG + chr3.4:58803998-58804017 None:intergenic 40.0%
TTTCCTTGATCAAAGGACAG+TGG - chr3.4:58802031-58802050 MS.gene04496:CDS 40.0%
! GAAGAGAGAGATGGATTTGT+TGG - chr3.4:58804826-58804845 MS.gene04496:CDS 40.0%
! GTTCTAAATTGCAGCCGAAT+CGG + chr3.4:58802186-58802205 None:intergenic 40.0%
! TGAATTCCATTCAGCATTGG+AGG + chr3.4:58804755-58804774 None:intergenic 40.0%
! TTTAGGAAAGGGTGCAAAAG+TGG - chr3.4:58801978-58801997 MS.gene04496:CDS 40.0%
!! ACTACTCAAAAAGCATCCAC+CGG - chr3.4:58804326-58804345 MS.gene04496:intron 40.0%
!! AGAGATGGATTTGTTGGAGT+TGG - chr3.4:58804832-58804851 MS.gene04496:CDS 40.0%
!! CAAGGTTATTTGGGTTTTGG+AGG + chr3.4:58803559-58803578 None:intergenic 40.0%
!! CCTCCACTTTTCTCATAAGT+AGG - chr3.4:58803203-58803222 MS.gene04496:intron 40.0%
!! CTGAAGTTGGTGAAGCAATA+TGG - chr3.4:58802623-58802642 MS.gene04496:intron 40.0%
!! GAAGTTTCTTTTGAGGGAAG+TGG + chr3.4:58801759-58801778 None:intergenic 40.0%
AAAAGGCCTCAAACCACTGA+TGG - chr3.4:58804260-58804279 MS.gene04496:intron 45.0%
AAGAGCTGGAAAGCAGTGTA+GGG - chr3.4:58802685-58802704 MS.gene04496:intron 45.0%
AAGAGGGTTTCTTGGAGTAG+GGG + chr3.4:58804556-58804575 None:intergenic 45.0%
AAGGAGGACCAATAGAAGAG+TGG + chr3.4:58801699-58801718 None:intergenic 45.0%
AGGACCAATAGAAGAGTGGT+TGG + chr3.4:58801695-58801714 None:intergenic 45.0%
AGGGTTTGAAGAGGGTTTCT+TGG + chr3.4:58804564-58804583 None:intergenic 45.0%
AGTCCACTGTCCTTTGATCA+AGG + chr3.4:58802037-58802056 None:intergenic 45.0%
ATGGCATGATTGGAAACCGT+TGG - chr3.4:58804141-58804160 MS.gene04496:intron 45.0%
CCAATTGGAGTACGTATTGG+TGG - chr3.4:58801649-58801668 MS.gene04496:CDS 45.0%
CCACCAATACGTACTCCAAT+TGG + chr3.4:58801652-58801671 None:intergenic 45.0%
CCCTCCAAATAACCTTGACA+AGG - chr3.4:58803176-58803195 MS.gene04496:intron 45.0%
CTATCAATGGCAGTCAAAGG+AGG + chr3.4:58801715-58801734 None:intergenic 45.0%
GAAAGCAGTGTAGGGAAAGA+TGG - chr3.4:58802693-58802712 MS.gene04496:intron 45.0%
GAAGAGGGTTTCTTGGAGTA+GGG + chr3.4:58804557-58804576 None:intergenic 45.0%
GGTTTACCATCAGTGGTTTG+AGG + chr3.4:58804269-58804288 None:intergenic 45.0%
TACCTTCCTCCAATGCTGAA+TGG - chr3.4:58804746-58804765 MS.gene04496:CDS 45.0%
TATGGAGGGAAACCTTGTCA+AGG + chr3.4:58803577-58803596 None:intergenic 45.0%
TGAAGAGGGTTTCTTGGAGT+AGG + chr3.4:58804558-58804577 None:intergenic 45.0%
TGGCATGATTGGAAACCGTT+GGG - chr3.4:58804142-58804161 MS.gene04496:intron 45.0%
TTCTTGGAGTAGGGGTTAAC+AGG + chr3.4:58804548-58804567 None:intergenic 45.0%
! ATTGGAGTACGTATTGGTGG+TGG - chr3.4:58801652-58801671 MS.gene04496:CDS 45.0%
! CTCCCTGATGTTACTGATTG+TGG - chr3.4:58804617-58804636 MS.gene04496:CDS 45.0%
! TTCCATTCAGCATTGGAGGA+AGG + chr3.4:58804751-58804770 None:intergenic 45.0%
!! AGTGGACTGATGAAGAAGAC+AGG - chr3.4:58802049-58802068 MS.gene04496:CDS 45.0%
!!! TCTTTTAATAATATATATTT+GGG - chr3.4:58802547-58802566 MS.gene04496:intron 5.0%
AGTGGAGGGAAACCTTGTCA+AGG + chr3.4:58803191-58803210 None:intergenic 50.0%
CATGATTGGAAACCGTTGGG+CGG - chr3.4:58804145-58804164 MS.gene04496:intron 50.0%
GAAGAGCTGGAAAGCAGTGT+AGG - chr3.4:58802684-58802703 MS.gene04496:intron 50.0%
GAGAAGTTGGAAGGAAGAGC+TGG - chr3.4:58802671-58802690 MS.gene04496:intron 50.0%
GCATGTAAATGCGGCCGATT+CGG - chr3.4:58802169-58802188 MS.gene04496:CDS 50.0%
GGAGTAGGGGTTAACAGGTT+CGG + chr3.4:58804543-58804562 None:intergenic 50.0%
TCTATCTTTGGCATCTGCGC+AGG - chr3.4:58803294-58803313 MS.gene04496:intron 50.0%
! AGTAGTAGCAGTAGTACCGG+TGG + chr3.4:58804345-58804364 None:intergenic 50.0%
! GGAAAGGGTGCAAAAGTGGT+TGG - chr3.4:58801982-58802001 MS.gene04496:CDS 50.0%
! TCTTTGCTATCTCCGCCCAA+CGG + chr3.4:58804160-58804179 None:intergenic 50.0%
CTCAGAGGGGAAGAGAGAGA+TGG - chr3.4:58804817-58804836 MS.gene04496:CDS 55.0%
GTCCTCAGAGATCGCTGACA+CGG + chr3.4:58804390-58804409 None:intergenic 55.0%
CTCCGTGTCAGCGATCTCTG+AGG - chr3.4:58804385-58804404 MS.gene04496:intron 60.0%


Chromosome Type Strat End Strand Name
chr3.4 gene 58801643 58804877 58801643 ID=MS.gene04496
chr3.4 mRNA 58801643 58804877 58801643 ID=MS.gene04496.t1;Parent=MS.gene04496
chr3.4 exon 58804450 58804877 58804450 ID=MS.gene04496.t1.exon1;Parent=MS.gene04496.t1
chr3.4 CDS 58804450 58804877 58804450 ID=cds.MS.gene04496.t1;Parent=MS.gene04496.t1
chr3.4 exon 58803778 58803904 58803778 ID=MS.gene04496.t1.exon2;Parent=MS.gene04496.t1
chr3.4 CDS 58803778 58803904 58803778 ID=cds.MS.gene04496.t1;Parent=MS.gene04496.t1
chr3.4 exon 58801643 58802425 58801643 ID=MS.gene04496.t1.exon3;Parent=MS.gene04496.t1
chr3.4 CDS 58801643 58802425 58801643 ID=cds.MS.gene04496.t1;Parent=MS.gene04496.t1
Gene Sequence

>MS.gene04496

ATGAAACCAATTGGAGTACGTATTGGTGGTGGTGATAATTTAAAGATCACCAACCACTCTTCTATTGGTCCTCCTTTGACTGCCATTGATAGATTCTTATGGGGTCAACACAACCACTTCCCTCAAAAGAAACTTCAACAAAATGTTGATGATCAAAATATTTATAGCTTTGGTTGTTCGAATGCTTCAACCTATAGTTTTATGTGGCCTAATAATAATAATATGATGTCTCAAGAAGCTAGCTTTGTTGATCAGCTATTGGCAAATGAAGAGGTGATGAATTGGACACAACAAATTCCTTCATTGTGTGTGGAGAAAGAAGATGCGATCAATGGTTTAGGAAAGGGTGCAAAAGTGGTTGGAAGAAGACCTAAGAAAGTGTCTTCTTTTTCCTTGATCAAAGGACAGTGGACTGATGAAGAAGACAGGTTTTGTAATCAAACCCTAATTGTTGTTTGAGTGTTTGTTTGTAGCATATGGTTCTAAATTGCGGTCGAAGTCGTGTATACGTTAAAATTTTGATAATGCATGTAAATGCGGCCGATTCGGCTGCAATTTAGAACTATGTTGATGAATGTATGATTGTGTGTGTGTGTGTCTTTTTATGATATTATATACTTGGACTAAATTTGAAGGTGTTTTGTTATTTGGTGTTACTTTTAAACAAAGGAAATTGTTGCACTTGTAGATCTCAATTTAGAACTATGTTTGTGATTTCTTTTTTGTCAATTTTTTTTTTTTGTGAAAAGATTTGTGAATTTTTTTAATAATATATATTTGGACTAAGTGTATTTTTAATAATATATATTTGGACTAAATTTTAAGGTCTTGTTATATAAAAAAAATGGTACAATTGCACAATTTAGAACTATCTTTGTGAAAGTAAGTTGTTGTTGTTTGTCTGTCTTTTAATAATATATATTTGGGCTAAATTTTAAGGTGTTTTGTAATTTGTTGTTATATAAAATCAAAGGAAATTGCTGAAGTTGGTGAAGCAATATGGTGTAAGAAAATGGTCTCAAATAGCTGAGAAGTTGGAAGGAAGAGCTGGAAAGCAGTGTAGGGAAAGATGGCATAATCATCTGAGGCCTGATATCAAAGTATGTCACTTCTTTAATCCTTCAATTTTTTCAATATATTTTCTCTTTAGAACAATATATTGAAAAAATATATTTTCAATATATTTTTTCAATATATAAAGCAAATGACCTCTCAAAAAAAATATAGAACAATGATTTATATTTGATATATGTTTTAGCTAGCCTTGAAAATTTATCTATGATTTTCATAATAATAGTGCATGAAGATTTAGATGTGATTTTTCTAAGATCTATTTTTGTCATCTGCTCAGTTCGATCAGTTTGTCTTTATTTACTTTCTATATCTTATGAACTTGCAGGCATAATCTTGTCACTTTCCAAATTTATCATTCACATGAATGTTTTGATTTTACTATATTTATTCAGAACTTTGATTCCTCCAACATTTTCTCACATTCCTCCTAAATCCACGTTTGGATTAATTGTCTTATTTCCCTCCAAATAACCTTGACAAGGTTTCCCTCCACTTTTCTCATAAGTAGGATATTTTAGCCTAGAAAATTTAGTTATATTTTGATAATTATTGAGCATCTAATTTGATTTTTCTAGGATCTATCTTTGGCATCTGCGCAGGTTGATCACTTTTTCTATATTTATCTTTTAAACTCTTGGGATGTAAAGTTTCTAAGTCAAAGATTAATACATACAAGGCTTAACGTTTTCACTTTCCAAATTTATCATTGACTTGCATGTTTTGATTTTACTATATTTATTCTGAACTTTGTTTCCTCCCACAATTTCTCTCATTTCTCCTGAACCCTAGTTTGGATTTATTGTCATATTAATACAGAAAACTTTGCTAATTAGAGTTTCCCTCCAAAACCCAAATAACCTTGACAAGGTTTCCCTCCATATTTCTCATAAGTAGGGTGTTATACATATGACTAAATCACACCAACAAGGTGTGCAAATACTCAGTTCTTTCTTTTCTTGTCTTTAAAATTTTTTAATTGTCTTTTGGTAAAGAAATTTAATAATATACTAACAATGTGCATACTAATTTTTTATAGAACTATATGAAAGTGCTAGATTGGAAATGGTTTTTTGATTCTTATAAAGATAGTTTAACATATGAAAGTGCTATCTTGAAAATAGTTTTTTGATTCGTTTCAAGTCATTCCATGTTTAGATTCACGGTGAATTTGACGTCTCATCATAACATTATACATGCCTTAGTATACTCTTTATATTTACTTATCGATATGGTTTTTTGTTTCTTTAATTTTATATTTTAAAAACCGTACTTTTTTTTCCAAGTTTCTTCGGGAAGTCTAATGTTAGTAAATGGTTAGATGTTGATGAGATTTGAACTTTACCACTTTATGACTCCGAACTTACTTTACATGTTGCAGAAAGATAGTTGGAGTGAAGAAGAAGAAAGGATGCTAGTAGAAACTCATGGCATGATTGGAAACCGTTGGGCGGAGATAGCAAAGAGAATTCCAGGAAGAACTGAGAATGCAATAAAGAATCATTGGAATGCAACAAAAAGGAGACAAAATTCAAGGAGAAAGAACAAAAGGCCTCAAACCACTGATGGTAAACCACAATCTTCTATTCTTCAAGACTACATCAAAACTTTGACTACTCAAAAAGCATCCACCGGTACTACTGCTACTACTACTACTGCTGCTACTACTAGCTCCGTGTCAGCGATCTCTGAGGACCCTTCTTCAAACCAATCTTCCTTTGTTTTTTCTAACCTATCCCATGAAAATTCATCATCACCACTTATATCTGAATCTTATGATGATGAACTCCTCTTCATGCAACAACTTTTCAAGGTGAATAATAACGCCGAACCTGTTAACCCCTACTCCAAGAAACCCTCTTCAAACCCTTACTATTCTTCCCAAACTAACAGTAATCAGATTCTCCCTGATGTTACTGATTGTGGATTTGTTCATTCCAATCTTTCCAATTACCCTAAACCAAATTCACAAAACAACATGTACTTGAGTACTTCTTCCACACCTATGATGAATTACCTTAATTCTGATCACTACCTTCCTCCAATGCTGAATGGAATTCAGAATCAGAACAATGTGGAGTTGCATCTTGGGAATATGAATTTCTCAGAGGGGAAGAGAGAGATGGATTTGTTGGAGTTGGTTTCTTCTGCTCAGTTTTATTAG
Protein sequence

>MS.gene04496.t1

MKPIGVRIGGGDNLKITNHSSIGPPLTAIDRFLWGQHNHFPQKKLQQNVDDQNIYSFGCSNASTYSFMWPNNNNMMSQEASFVDQLLANEEVMNWTQQIPSLCVEKEDAINGLGKGAKVVGRRPKKVSSFSLIKGQWTDEEDRKLLKLVKQYGVRKWSQIAEKLEGRAGKQCRERWHNHLRPDIKKDSWSEEEERMLVETHGMIGNRWAEIAKRIPGRTENAIKNHWNATKRRQNSRRKNKRPQTTDGKPQSSILQDYIKTLTTQKASTGTTATTTTAATTSSVSAISEDPSSNQSSFVFSNLSHENSSSPLISESYDDELLFMQQLFKVNNNAEPVNPYSKKPSSNPYYSSQTNSNQILPDVTDCGFVHSNLSNYPKPNSQNNMYLSTSSTPMMNYLNSDHYLPPMLNGIQNQNNVELHLGNMNFSEGKREMDLLELVSSAQFY