Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045014.t1 | AFK46965.1 | 97.8 | 230 | 5 | 0 | 1 | 230 | 1 | 230 | 9.80E-122 | 446.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045014.t1 | Q8VZ42 | 62.3 | 239 | 80 | 3 | 1 | 238 | 1 | 230 | 5.9e-83 | 308.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045014.t1 | I3T373 | 97.8 | 230 | 5 | 0 | 1 | 230 | 1 | 230 | 7.1e-122 | 446.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene045014.t1 | TF | C2H2 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045014.t1 | MTR_0100s0160 | 97.552 | 286 | 7 | 0 | 1 | 286 | 1 | 286 | 0.0 | 583 |
| MS.gene045014.t1 | MTR_7g091810 | 65.505 | 287 | 78 | 2 | 1 | 285 | 1 | 268 | 1.94e-129 | 369 |
| MS.gene045014.t1 | MTR_6g008210 | 48.921 | 139 | 64 | 2 | 2 | 137 | 5 | 139 | 3.84e-38 | 133 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045014.t1 | AT2G41835 | 63.066 | 287 | 96 | 3 | 1 | 286 | 1 | 278 | 1.18e-128 | 367 |
| MS.gene045014.t1 | AT3G57480 | 53.659 | 287 | 95 | 2 | 1 | 287 | 1 | 249 | 3.89e-107 | 311 |
| MS.gene045014.t1 | AT3G57480 | 53.659 | 287 | 95 | 2 | 1 | 287 | 1 | 249 | 3.89e-107 | 311 |
| MS.gene045014.t1 | AT3G28210 | 41.081 | 185 | 79 | 4 | 2 | 183 | 5 | 162 | 4.49e-38 | 133 |
| MS.gene045014.t1 | AT3G28210 | 41.081 | 185 | 79 | 4 | 2 | 183 | 5 | 162 | 4.49e-38 | 133 |
| MS.gene045014.t1 | AT5G48205 | 53.211 | 109 | 23 | 3 | 1 | 106 | 1 | 84 | 1.14e-28 | 108 |
Find 0 sgRNAs with CRISPR-Local
Find 164 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAGTTTAATTAAGTGTTTAT+TGG | + | 8574:1203844-1203863 | None:intergenic | 15.0% |
| !! | TATTCATTAGATTCATAAAA+GGG | + | 8574:1205082-1205101 | None:intergenic | 15.0% |
| !!! | AATCATATAAGCTATTTTTT+GGG | + | 8574:1203657-1203676 | None:intergenic | 15.0% |
| !!! | ACATTGTATTTTTATTTTTG+AGG | - | 8574:1204561-1204580 | MS.gene045014:intron | 15.0% |
| !!! | TAATCATATAAGCTATTTTT+TGG | + | 8574:1203658-1203677 | None:intergenic | 15.0% |
| !!! | TGATGATATTTTTATTTTGT+GGG | + | 8574:1204292-1204311 | None:intergenic | 15.0% |
| !!! | TTGATGATATTTTTATTTTG+TGG | + | 8574:1204293-1204312 | None:intergenic | 15.0% |
| !! | AAACCCTAATAATAAAATCT+AGG | + | 8574:1203530-1203549 | None:intergenic | 20.0% |
| !! | AAATTATTAAGAATGCATAG+TGG | + | 8574:1203476-1203495 | None:intergenic | 20.0% |
| !! | AAGAAAAAGAAAAGAGAAAT+TGG | + | 8574:1203408-1203427 | None:intergenic | 20.0% |
| !! | AATGAATAGAAGTAGAAAAA+AGG | - | 8574:1205094-1205113 | MS.gene045014:intron | 20.0% |
| !! | AATTATTAAGAATGCATAGT+GGG | + | 8574:1203475-1203494 | None:intergenic | 20.0% |
| !! | ATCATAAGTAAAAACATTGT+TGG | + | 8574:1204599-1204618 | None:intergenic | 20.0% |
| !! | CTATTCATTAGATTCATAAA+AGG | + | 8574:1205083-1205102 | None:intergenic | 20.0% |
| !! | TAACTTTCTCATAATTTGAT+GGG | + | 8574:1204905-1204924 | None:intergenic | 20.0% |
| !! | TATGTTTGCAAAAATTATCT+AGG | + | 8574:1204087-1204106 | None:intergenic | 20.0% |
| !!! | AAATTTGTTTCCACTTTTTT+AGG | + | 8574:1205059-1205078 | None:intergenic | 20.0% |
| !!! | AGATTTTATTATTAGGGTTT+TGG | - | 8574:1203530-1203549 | MS.gene045014:CDS | 20.0% |
| !!! | ATCATATAAGCTATTTTTTG+GGG | + | 8574:1203656-1203675 | None:intergenic | 20.0% |
| !!! | GATTTTATTATTAGGGTTTT+GGG | - | 8574:1203531-1203550 | MS.gene045014:CDS | 20.0% |
| !!! | TAATTTTTGCAAACATAAGT+TGG | - | 8574:1204090-1204109 | MS.gene045014:intron | 20.0% |
| ! | AAACTATCATGTGAACAAAT+TGG | - | 8574:1204311-1204330 | MS.gene045014:intron | 25.0% |
| ! | ACCAAAAATGAAAATCGTTT+AGG | + | 8574:1204531-1204550 | None:intergenic | 25.0% |
| ! | CAAACGGTTTATCAAAATTA+CGG | - | 8574:1204426-1204445 | MS.gene045014:intron | 25.0% |
| ! | GTAACTTTCTCATAATTTGA+TGG | + | 8574:1204906-1204925 | None:intergenic | 25.0% |
| ! | TTAATTAAACAGAAACAACG+TGG | + | 8574:1203449-1203468 | None:intergenic | 25.0% |
| ! | TTATTGGATAAGCTGTTATA+GGG | + | 8574:1203828-1203847 | None:intergenic | 25.0% |
| ! | TTTATTGGATAAGCTGTTAT+AGG | + | 8574:1203829-1203848 | None:intergenic | 25.0% |
| !! | TCCTAAACGATTTTCATTTT+TGG | - | 8574:1204527-1204546 | MS.gene045014:intron | 25.0% |
| !! | TGGCCTAGATTTTATTATTA+GGG | - | 8574:1203524-1203543 | MS.gene045014:CDS | 25.0% |
| !! | TTGGCCTAGATTTTATTATT+AGG | - | 8574:1203523-1203542 | MS.gene045014:CDS | 25.0% |
| !!! | ATTTTGTTTGATGACATTCT+TGG | - | 8574:1204617-1204636 | MS.gene045014:intron | 25.0% |
| !!! | CATCTAATTGAAAGTACTTT+TGG | - | 8574:1203504-1203523 | MS.gene045014:CDS | 25.0% |
| !!! | CTTTATTTGGATTTTATCTC+AGG | - | 8574:1203594-1203613 | MS.gene045014:CDS | 25.0% |
| !!! | GTATTTTTATTTTTGAGGTG+TGG | - | 8574:1204566-1204585 | MS.gene045014:intron | 25.0% |
| !!! | TATAACTTGTTGCTTTGAAT+TGG | - | 8574:1203749-1203768 | MS.gene045014:CDS | 25.0% |
| !!! | TATATTAGCCTTTATAGGAT+AGG | - | 8574:1204185-1204204 | MS.gene045014:intron | 25.0% |
| !!! | TTTTGTTTGATGACATTCTT+GGG | - | 8574:1204618-1204637 | MS.gene045014:intron | 25.0% |
| AAATCGAAACTACCCTTAAA+TGG | + | 8574:1203567-1203586 | None:intergenic | 30.0% | |
| ATTACGGTATTGCAGAAAAT+AGG | - | 8574:1204442-1204461 | MS.gene045014:intron | 30.0% | |
| CAAAAAGTTCATGAAAGAAG+TGG | - | 8574:1205359-1205378 | MS.gene045014:intron | 30.0% | |
| CCAAACAATACACCTAAAAT+GGG | + | 8574:1204731-1204750 | None:intergenic | 30.0% | |
| CTCAAACACAATTAAATGCA+GGG | - | 8574:1204974-1204993 | MS.gene045014:intron | 30.0% | |
| TAAACTACTTAACTCACCTT+CGG | - | 8574:1203857-1203876 | MS.gene045014:CDS | 30.0% | |
| TATCATGTGAACAAATTGGA+AGG | - | 8574:1204315-1204334 | MS.gene045014:intron | 30.0% | |
| TCCAAACAATACACCTAAAA+TGG | + | 8574:1204732-1204751 | None:intergenic | 30.0% | |
| TCTCAAACACAATTAAATGC+AGG | - | 8574:1204973-1204992 | MS.gene045014:intron | 30.0% | |
| TTAAGTGCTTAGACTATGTT+AGG | - | 8574:1203675-1203694 | MS.gene045014:CDS | 30.0% | |
| TTACGGTATTGCAGAAAATA+GGG | - | 8574:1204443-1204462 | MS.gene045014:intron | 30.0% | |
| ! | CGATTTTCGAAGACTTTATT+TGG | - | 8574:1203581-1203600 | MS.gene045014:CDS | 30.0% |
| ! | TGTGGTGACAAAAATTTGTT+AGG | - | 8574:1203932-1203951 | MS.gene045014:CDS | 30.0% |
| !! | GCAGTTATATTAGCCTTTAT+AGG | - | 8574:1204180-1204199 | MS.gene045014:intron | 30.0% |
| !! | GTGGTGACAAAAATTTGTTA+GGG | - | 8574:1203933-1203952 | MS.gene045014:CDS | 30.0% |
| !! | TTTTTGCAAACATAAGTTGG+AGG | - | 8574:1204093-1204112 | MS.gene045014:intron | 30.0% |
| !!! | TTATTAGGGTTTTGGGTTTA+CGG | - | 8574:1203538-1203557 | MS.gene045014:CDS | 30.0% |
| AACTAGAGAAGGATGATAGT+TGG | - | 8574:1204132-1204151 | MS.gene045014:intron | 35.0% | |
| AATAAACGCGAAGCTTCAAT+TGG | + | 8574:1204248-1204267 | None:intergenic | 35.0% | |
| ACCGATGTTTGATATAACTC+CGG | + | 8574:1204758-1204777 | None:intergenic | 35.0% | |
| ACCGGAGTTATATCAAACAT+CGG | - | 8574:1204754-1204773 | MS.gene045014:intron | 35.0% | |
| ACTATCATCCTTCTCTAGTT+TGG | + | 8574:1204132-1204151 | None:intergenic | 35.0% | |
| AGAGAAATCCAAACTAGAGA+AGG | - | 8574:1204121-1204140 | MS.gene045014:intron | 35.0% | |
| AGCAAGATCCAAACATAACA+TGG | - | 8574:1204853-1204872 | MS.gene045014:intron | 35.0% | |
| ATCACTCTCCTATCCTATAA+AGG | + | 8574:1204196-1204215 | None:intergenic | 35.0% | |
| ATCGATTAAAGTAGTGATCG+AGG | + | 8574:1205333-1205352 | None:intergenic | 35.0% | |
| ATGCATGTGTATAGAAGTTG+TGG | - | 8574:1203914-1203933 | MS.gene045014:CDS | 35.0% | |
| CAAAAAACAAACAGGCTCTT+AGG | - | 8574:1203796-1203815 | MS.gene045014:CDS | 35.0% | |
| CAAACCTATGCTTCAAACAA+TGG | + | 8574:1205013-1205032 | None:intergenic | 35.0% | |
| CAACTTCCTCTTCATCTAAA+TGG | - | 8574:1205138-1205157 | MS.gene045014:intron | 35.0% | |
| CCATTTCAAACTGAGTTTGA+GGG | - | 8574:1204047-1204066 | MS.gene045014:intron | 35.0% | |
| CTGAGTTTGAGGGAAAAAAT+CGG | - | 8574:1204057-1204076 | MS.gene045014:intron | 35.0% | |
| GCAAGATCCAAACATAACAT+GGG | - | 8574:1204854-1204873 | MS.gene045014:intron | 35.0% | |
| GGTTTACGGTATCCATTTAA+GGG | - | 8574:1203552-1203571 | MS.gene045014:CDS | 35.0% | |
| GTGAATCCTTTACTACACTT+AGG | + | 8574:1205422-1205441 | None:intergenic | 35.0% | |
| TATAACACTGCAGAGTCAAA+CGG | - | 8574:1204410-1204429 | MS.gene045014:intron | 35.0% | |
| TCCATTTCAAACTGAGTTTG+AGG | - | 8574:1204046-1204065 | MS.gene045014:intron | 35.0% | |
| TGATTCTCCCATGTTATGTT+TGG | + | 8574:1204864-1204883 | None:intergenic | 35.0% | |
| TGGTGAAATTAACCAAGCAT+GGG | - | 8574:1205229-1205248 | MS.gene045014:intron | 35.0% | |
| TGTAGTCCATTTAGATGAAG+AGG | + | 8574:1205147-1205166 | None:intergenic | 35.0% | |
| TTTATAGGATAGGAGAGTGA+TGG | - | 8574:1204195-1204214 | MS.gene045014:intron | 35.0% | |
| TTTCCTAGATCTGGAAATTC+TGG | + | 8574:1203307-1203326 | None:intergenic | 35.0% | |
| ! | AATGAGGTTGGTTCAAACTT+TGG | + | 8574:1203986-1204005 | None:intergenic | 35.0% |
| ! | ATTTGTTAGGGTTGCATGTT+TGG | - | 8574:1203945-1203964 | MS.gene045014:CDS | 35.0% |
| ! | CAATACACCTAAAATGGGTT+TGG | + | 8574:1204726-1204745 | None:intergenic | 35.0% |
| ! | CATTGTTTGAAGCATAGGTT+TGG | - | 8574:1205011-1205030 | MS.gene045014:intron | 35.0% |
| ! | CTCTAGTTTGGATTTCTCTT+GGG | + | 8574:1204120-1204139 | None:intergenic | 35.0% |
| ! | GTATAAGCCAAACCCATTTT+AGG | - | 8574:1204716-1204735 | MS.gene045014:intron | 35.0% |
| ! | TAGACCATTGTTTGAAGCAT+AGG | - | 8574:1205006-1205025 | MS.gene045014:intron | 35.0% |
| ! | TCTCTAGTTTGGATTTCTCT+TGG | + | 8574:1204121-1204140 | None:intergenic | 35.0% |
| !! | CCCATTTTAGGTGTATTGTT+TGG | - | 8574:1204728-1204747 | MS.gene045014:intron | 35.0% |
| !!! | AGCCTGTTTGTTTTTTGAGT+GGG | + | 8574:1203793-1203812 | None:intergenic | 35.0% |
| ACTCCAGAATTTCCAGATCT+AGG | - | 8574:1203301-1203320 | MS.gene045014:CDS | 40.0% | |
| AGAGGAAGTTGAACTTGAGT+TGG | + | 8574:1205129-1205148 | None:intergenic | 40.0% | |
| AGTAGTGATCGAGGAAAACT+TGG | + | 8574:1205324-1205343 | None:intergenic | 40.0% | |
| ATACCACTTCCAATGCAAGT+TGG | - | 8574:1203708-1203727 | MS.gene045014:CDS | 40.0% | |
| ATATGTCCACTTTGCGCTAA+AGG | - | 8574:1204813-1204832 | MS.gene045014:intron | 40.0% | |
| ATGTCCAGGACCTAAAAAAG+TGG | - | 8574:1205046-1205065 | MS.gene045014:intron | 40.0% | |
| CCCTCAAACTCAGTTTGAAA+TGG | + | 8574:1204050-1204069 | None:intergenic | 40.0% | |
| CGAAGCTCGAATATTAGAAG+CGG | + | 8574:1205183-1205202 | None:intergenic | 40.0% | |
| CGCTTCTAATATTCGAGCTT+CGG | - | 8574:1205181-1205200 | MS.gene045014:intron | 40.0% | |
| CGTGGACACATAAAAGTTGA+AGG | + | 8574:1203431-1203450 | None:intergenic | 40.0% | |
| GAAATCAACGAGCTTGCAAT+CGG | + | 8574:1203344-1203363 | None:intergenic | 40.0% | |
| GAAATGGAAGCAAAGAGAAG+TGG | + | 8574:1204034-1204053 | None:intergenic | 40.0% | |
| GAAATTGGTTAGTACGAACC+TGG | + | 8574:1203393-1203412 | None:intergenic | 40.0% | |
| GGGTTTACGGTATCCATTTA+AGG | - | 8574:1203551-1203570 | MS.gene045014:CDS | 40.0% | |
| GGTGAAATTAACCAAGCATG+GGG | - | 8574:1205230-1205249 | MS.gene045014:intron | 40.0% | |
| GTCGCAGATCAAGAAAATAG+AGG | - | 8574:1204352-1204371 | MS.gene045014:intron | 40.0% | |
| GTGAAATTAACCAAGCATGG+GGG | - | 8574:1205231-1205250 | MS.gene045014:intron | 40.0% | |
| GTGGTGAAATTAACCAAGCA+TGG | - | 8574:1205228-1205247 | MS.gene045014:intron | 40.0% | |
| GTTATGTTTGGATCTTGCTC+AGG | + | 8574:1204852-1204871 | None:intergenic | 40.0% | |
| TGGTAACATTCGCAACAGAT+CGG | + | 8574:1205388-1205407 | None:intergenic | 40.0% | |
| ! | AGAAGTGGCTTTTGCAAACT+CGG | + | 8574:1204019-1204038 | None:intergenic | 40.0% |
| ! | AGGTGTATTGTTTGGAACAC+CGG | - | 8574:1204736-1204755 | MS.gene045014:intron | 40.0% |
| ! | ATAATTTGATGGGTCGCAGT+CGG | + | 8574:1204895-1204914 | None:intergenic | 40.0% |
| ! | TCTTGGGAATTTGCGTTTTG+TGG | - | 8574:1204634-1204653 | MS.gene045014:intron | 40.0% |
| ! | TGGGTTTGGCTTATACAGTT+AGG | + | 8574:1204712-1204731 | None:intergenic | 40.0% |
| !!! | CCTGTTTGTTTTTTGAGTGG+GGG | + | 8574:1203791-1203810 | None:intergenic | 40.0% |
| !!! | GAGCCTGTTTGTTTTTTGAG+TGG | + | 8574:1203794-1203813 | None:intergenic | 40.0% |
| !!! | GCCTGTTTGTTTTTTGAGTG+GGG | + | 8574:1203792-1203811 | None:intergenic | 40.0% |
| !!! | GTTTCCACTTTTTTAGGTCC+TGG | + | 8574:1205053-1205072 | None:intergenic | 40.0% |
| !!! | TTTTGCTTAGCAAGTACCGA+AGG | + | 8574:1203876-1203895 | None:intergenic | 40.0% |
| AAAACTTGGCACCGCATTGA+GGG | + | 8574:1205310-1205329 | None:intergenic | 45.0% | |
| ACACTTAGGACACGCATCAA+TGG | + | 8574:1205408-1205427 | None:intergenic | 45.0% | |
| AGGAGAGTGATGGTTAAGAG+TGG | - | 8574:1204205-1204224 | MS.gene045014:intron | 45.0% | |
| ATGTCACAGCCAACTTGCAT+TGG | + | 8574:1203720-1203739 | None:intergenic | 45.0% | |
| CCCCCACTCAAAAAACAAAC+AGG | - | 8574:1203788-1203807 | MS.gene045014:CDS | 45.0% | |
| GATGGTTAAGAGTGGGAACT+GGG | - | 8574:1204213-1204232 | MS.gene045014:intron | 45.0% | |
| GCGTGTCCTAAGTGTAGTAA+AGG | - | 8574:1205413-1205432 | MS.gene045014:CDS | 45.0% | |
| GCTGGAATGTCAAAGTTGAG+TGG | - | 8574:1205209-1205228 | MS.gene045014:intron | 45.0% | |
| GGAGAGTGATGGTTAAGAGT+GGG | - | 8574:1204206-1204225 | MS.gene045014:intron | 45.0% | |
| GGTTTGCAAGCAAATGAGGT+TGG | + | 8574:1203998-1204017 | None:intergenic | 45.0% | |
| TAATATTCGAGCTTCGGCTG+AGG | - | 8574:1205187-1205206 | MS.gene045014:intron | 45.0% | |
| TGATGGTTAAGAGTGGGAAC+TGG | - | 8574:1204212-1204231 | MS.gene045014:intron | 45.0% | |
| TTGGATCTTGCTCAGGAACT+AGG | + | 8574:1204845-1204864 | None:intergenic | 45.0% | |
| ! | AATGGTGGGAGAAAGAGCAA+CGG | - | 8574:1205263-1205282 | MS.gene045014:intron | 45.0% |
| ! | ACTCGGTTTGCAAGCAAATG+AGG | + | 8574:1204002-1204021 | None:intergenic | 45.0% |
| ! | GAGCAGTGTTTTCCTAGATC+TGG | + | 8574:1203316-1203335 | None:intergenic | 45.0% |
| AACATGCTCCACAAGGGACA+CGG | + | 8574:1205450-1205469 | None:intergenic | 50.0% | |
| ATCTCTTTGCATCCAGCTGC+AGG | + | 8574:1204945-1204964 | None:intergenic | 50.0% | |
| CAGCCAACTTGCATTGGAAG+TGG | + | 8574:1203714-1203733 | None:intergenic | 50.0% | |
| CATGTTGAGAGGGAACATGG+TGG | - | 8574:1205464-1205483 | MS.gene045014:CDS | 50.0% | |
| CCTCTCAACATGCTCCACAA+GGG | + | 8574:1205456-1205475 | None:intergenic | 50.0% | |
| CCTTGTGGAGCATGTTGAGA+GGG | - | 8574:1205454-1205473 | MS.gene045014:CDS | 50.0% | |
| GAAAACTTGGCACCGCATTG+AGG | + | 8574:1205311-1205330 | None:intergenic | 50.0% | |
| GAGCATGTTGAGAGGGAACA+TGG | - | 8574:1205461-1205480 | MS.gene045014:CDS | 50.0% | |
| GATCTTGCTCAGGAACTAGG+CGG | + | 8574:1204842-1204861 | None:intergenic | 50.0% | |
| GGTCCTGATCACAAATGTCC+AGG | - | 8574:1205032-1205051 | MS.gene045014:intron | 50.0% | |
| GGTCCTGGACATTTGTGATC+AGG | + | 8574:1205038-1205057 | None:intergenic | 50.0% | |
| TAGCAGCGATCGCAAGTGAA+AGG | + | 8574:1203370-1203389 | None:intergenic | 50.0% | |
| TCTCTTTGCATCCAGCTGCA+GGG | + | 8574:1204944-1204963 | None:intergenic | 50.0% | |
| !! | AAGAAAAAGTGCCCTGCAGC+TGG | - | 8574:1204930-1204949 | MS.gene045014:intron | 50.0% |
| ACATGCTCCACAAGGGACAC+GGG | + | 8574:1205449-1205468 | None:intergenic | 55.0% | |
| CCCTCTCAACATGCTCCACA+AGG | + | 8574:1205457-1205476 | None:intergenic | 55.0% | |
| CCCTTGTGGAGCATGTTGAG+AGG | - | 8574:1205453-1205472 | MS.gene045014:CDS | 55.0% | |
| CGGACTCCTTTAGCGCAAAG+TGG | + | 8574:1204822-1204841 | None:intergenic | 55.0% | |
| GCATGGGGGACATCAAGCAA+TGG | - | 8574:1205245-1205264 | MS.gene045014:intron | 55.0% | |
| GGGGGACATCAAGCAATGGT+GGG | - | 8574:1205249-1205268 | MS.gene045014:intron | 55.0% | |
| GTGGAGCAATGCCCTCAATG+CGG | - | 8574:1205296-1205315 | MS.gene045014:intron | 55.0% | |
| TGCTTGATGTCCCCCATGCT+TGG | + | 8574:1205244-1205263 | None:intergenic | 55.0% | |
| TGGGGGACATCAAGCAATGG+TGG | - | 8574:1205248-1205267 | MS.gene045014:intron | 55.0% | |
| ATTCGAGCTTCGGCTGAGGC+TGG | - | 8574:1205191-1205210 | MS.gene045014:intron | 60.0% | |
| CACAGATCCCGTGTCCCTTG+TGG | - | 8574:1205439-1205458 | MS.gene045014:CDS | 60.0% | |
| CACTTGCGATCGCTGCTACC+AGG | - | 8574:1203372-1203391 | MS.gene045014:CDS | 60.0% | |
| GAGCAACGGCAGTGGTCAAG+TGG | - | 8574:1205277-1205296 | MS.gene045014:intron | 60.0% | |
| GGGAGAAAGAGCAACGGCAG+TGG | - | 8574:1205269-1205288 | MS.gene045014:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 8574 | gene | 1203295 | 1205502 | 1203295 | ID=MS.gene045014 |
| 8574 | mRNA | 1203295 | 1205502 | 1203295 | ID=MS.gene045014.t1;Parent=MS.gene045014 |
| 8574 | exon | 1205404 | 1205502 | 1205404 | ID=MS.gene045014.t1.exon1;Parent=MS.gene045014.t1 |
| 8574 | CDS | 1205404 | 1205502 | 1205404 | ID=cds.MS.gene045014.t1;Parent=MS.gene045014.t1 |
| 8574 | exon | 1203295 | 1204059 | 1203295 | ID=MS.gene045014.t1.exon2;Parent=MS.gene045014.t1 |
| 8574 | CDS | 1203295 | 1204059 | 1203295 | ID=cds.MS.gene045014.t1;Parent=MS.gene045014.t1 |
| Gene Sequence |
| Protein sequence |
