Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene045042.t1 | AES77465.1 | 88.5 | 488 | 53 | 2 | 1 | 487 | 1 | 486 | 1.90E-226 | 795 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene045042.t1 | Q93ZL5 | 42.2 | 379 | 154 | 10 | 126 | 487 | 127 | 457 | 5.0e-58 | 226.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene045042.t1 | G7L202 | 88.5 | 488 | 53 | 2 | 1 | 487 | 1 | 486 | 1.4e-226 | 795.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene045042.t1 | TF | C2C2-Dof |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene045042.t1 | MTR_7g010950 | 90.779 | 488 | 42 | 3 | 1 | 487 | 1 | 486 | 0.0 | 886 |
MS.gene045042.t1 | MTR_6g012450 | 57.515 | 499 | 196 | 8 | 1 | 487 | 1 | 495 | 8.07e-180 | 513 |
MS.gene045042.t1 | MTR_4g082060 | 44.289 | 499 | 228 | 15 | 1 | 485 | 1 | 463 | 4.84e-116 | 349 |
MS.gene045042.t1 | MTR_3g435480 | 41.762 | 522 | 212 | 19 | 1 | 487 | 1 | 465 | 1.08e-99 | 307 |
MS.gene045042.t1 | MTR_5g041530 | 37.149 | 498 | 177 | 17 | 4 | 485 | 2 | 379 | 5.39e-66 | 218 |
MS.gene045042.t1 | MTR_8g044220 | 34.661 | 502 | 238 | 20 | 3 | 486 | 9 | 438 | 1.82e-65 | 218 |
MS.gene045042.t1 | MTR_5g041400 | 35.815 | 497 | 167 | 22 | 4 | 485 | 2 | 361 | 6.81e-64 | 211 |
MS.gene045042.t1 | MTR_7g086780 | 34.943 | 435 | 196 | 15 | 79 | 486 | 47 | 421 | 3.24e-56 | 193 |
MS.gene045042.t1 | MTR_6g027460 | 37.847 | 288 | 104 | 9 | 2 | 263 | 7 | 245 | 2.95e-44 | 159 |
MS.gene045042.t1 | MTR_6g027450 | 44.809 | 183 | 83 | 4 | 96 | 263 | 48 | 227 | 2.40e-42 | 153 |
MS.gene045042.t1 | MTR_5g041420 | 39.850 | 266 | 112 | 8 | 6 | 248 | 4 | 244 | 4.34e-40 | 147 |
MS.gene045042.t1 | MTR_5g041380 | 40.664 | 241 | 113 | 8 | 4 | 240 | 2 | 216 | 1.56e-38 | 144 |
MS.gene045042.t1 | MTR_5g041380 | 42.442 | 172 | 60 | 10 | 317 | 485 | 234 | 369 | 1.20e-22 | 99.8 |
MS.gene045042.t1 | MTR_2g016030 | 83.333 | 60 | 10 | 0 | 131 | 190 | 41 | 100 | 4.37e-33 | 123 |
MS.gene045042.t1 | MTR_8g079060 | 62.857 | 70 | 25 | 1 | 137 | 205 | 29 | 98 | 5.03e-25 | 103 |
MS.gene045042.t1 | MTR_3g091820 | 66.667 | 60 | 20 | 0 | 134 | 193 | 40 | 99 | 1.50e-24 | 103 |
MS.gene045042.t1 | MTR_8g027295 | 66.102 | 59 | 20 | 0 | 132 | 190 | 19 | 77 | 4.99e-24 | 101 |
MS.gene045042.t1 | MTR_8g479350 | 75.472 | 53 | 13 | 0 | 139 | 191 | 70 | 122 | 5.27e-24 | 103 |
MS.gene045042.t1 | MTR_8g015840 | 64.516 | 62 | 22 | 0 | 137 | 198 | 20 | 81 | 6.35e-24 | 100 |
MS.gene045042.t1 | MTR_4g109980 | 71.698 | 53 | 15 | 0 | 135 | 187 | 38 | 90 | 6.57e-24 | 102 |
MS.gene045042.t1 | MTR_2g093220 | 67.797 | 59 | 19 | 0 | 132 | 190 | 35 | 93 | 1.01e-23 | 101 |
MS.gene045042.t1 | MTR_2g059540 | 75.510 | 49 | 12 | 0 | 137 | 185 | 31 | 79 | 1.36e-23 | 99.0 |
MS.gene045042.t1 | MTR_4g022370 | 61.290 | 62 | 24 | 0 | 129 | 190 | 74 | 135 | 1.45e-23 | 102 |
MS.gene045042.t1 | MTR_2g096740 | 59.155 | 71 | 29 | 0 | 139 | 209 | 79 | 149 | 1.56e-23 | 100 |
MS.gene045042.t1 | MTR_2g096740 | 59.155 | 71 | 29 | 0 | 139 | 209 | 64 | 134 | 1.68e-23 | 100 |
MS.gene045042.t1 | MTR_4g088580 | 46.296 | 108 | 42 | 3 | 94 | 190 | 6 | 108 | 3.90e-23 | 101 |
MS.gene045042.t1 | MTR_4g461080 | 66.154 | 65 | 21 | 1 | 126 | 189 | 17 | 81 | 4.70e-23 | 99.0 |
MS.gene045042.t1 | MTR_8g068210 | 52.000 | 75 | 36 | 0 | 116 | 190 | 11 | 85 | 5.03e-23 | 100 |
MS.gene045042.t1 | MTR_7g024670 | 43.689 | 103 | 57 | 1 | 87 | 189 | 28 | 129 | 5.18e-23 | 100 |
MS.gene045042.t1 | MTR_1g056810 | 54.321 | 81 | 34 | 2 | 132 | 209 | 6 | 86 | 1.05e-22 | 98.2 |
MS.gene045042.t1 | MTR_1g077600 | 46.237 | 93 | 45 | 1 | 97 | 189 | 8 | 95 | 1.10e-22 | 97.8 |
MS.gene045042.t1 | MTR_3g090430 | 68.421 | 57 | 17 | 1 | 135 | 190 | 48 | 104 | 1.11e-22 | 99.4 |
MS.gene045042.t1 | MTR_1g077600 | 46.237 | 93 | 45 | 1 | 97 | 189 | 8 | 95 | 1.27e-22 | 98.2 |
MS.gene045042.t1 | MTR_4g063780 | 57.353 | 68 | 29 | 0 | 130 | 197 | 68 | 135 | 1.63e-22 | 98.6 |
MS.gene045042.t1 | MTR_2g013370 | 74.074 | 54 | 13 | 1 | 137 | 190 | 46 | 98 | 8.57e-22 | 95.5 |
MS.gene045042.t1 | MTR_4g089095 | 69.231 | 52 | 16 | 0 | 139 | 190 | 52 | 103 | 1.04e-21 | 95.9 |
MS.gene045042.t1 | MTR_5g031440 | 65.455 | 55 | 19 | 0 | 133 | 187 | 39 | 93 | 1.16e-21 | 96.3 |
MS.gene045042.t1 | MTR_4g089095 | 69.231 | 52 | 16 | 0 | 139 | 190 | 18 | 69 | 1.48e-21 | 94.4 |
MS.gene045042.t1 | MTR_2g014060 | 72.000 | 50 | 14 | 0 | 139 | 188 | 27 | 76 | 1.52e-21 | 95.9 |
MS.gene045042.t1 | MTR_2g014170 | 73.469 | 49 | 13 | 0 | 137 | 185 | 45 | 93 | 2.16e-21 | 95.1 |
MS.gene045042.t1 | MTR_7g059400 | 69.231 | 52 | 16 | 0 | 139 | 190 | 78 | 129 | 2.42e-21 | 95.5 |
MS.gene045042.t1 | MTR_3g077750 | 52.874 | 87 | 40 | 1 | 123 | 208 | 46 | 132 | 2.87e-21 | 95.1 |
MS.gene045042.t1 | MTR_3g118510 | 80.435 | 46 | 5 | 1 | 62 | 107 | 29 | 70 | 8.23e-13 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene045042.t1 | AT5G39660 | 41.176 | 510 | 217 | 17 | 6 | 487 | 3 | 457 | 2.65e-95 | 296 |
MS.gene045042.t1 | AT5G39660 | 41.176 | 510 | 217 | 17 | 6 | 487 | 3 | 457 | 2.65e-95 | 296 |
MS.gene045042.t1 | AT5G39660 | 41.176 | 510 | 217 | 17 | 6 | 487 | 3 | 457 | 2.65e-95 | 296 |
MS.gene045042.t1 | AT3G47500 | 41.818 | 495 | 228 | 22 | 1 | 485 | 2 | 446 | 3.20e-89 | 280 |
MS.gene045042.t1 | AT5G62430 | 38.660 | 388 | 117 | 16 | 107 | 485 | 21 | 296 | 9.59e-58 | 193 |
MS.gene045042.t1 | AT1G69570 | 33.466 | 502 | 212 | 21 | 1 | 486 | 1 | 396 | 6.69e-53 | 184 |
MS.gene045042.t1 | AT1G26790 | 31.225 | 506 | 187 | 24 | 1 | 486 | 7 | 371 | 5.71e-41 | 151 |
MS.gene045042.t1 | AT1G29160 | 85.000 | 60 | 9 | 0 | 131 | 190 | 56 | 115 | 7.51e-35 | 129 |
MS.gene045042.t1 | AT2G34140 | 81.667 | 60 | 11 | 0 | 131 | 190 | 52 | 111 | 5.41e-33 | 123 |
MS.gene045042.t1 | AT1G51700 | 63.889 | 72 | 21 | 2 | 137 | 203 | 33 | 104 | 4.25e-25 | 102 |
MS.gene045042.t1 | AT5G60850 | 70.690 | 58 | 17 | 0 | 137 | 194 | 51 | 108 | 6.25e-25 | 105 |
MS.gene045042.t1 | AT5G60200 | 66.129 | 62 | 21 | 0 | 133 | 194 | 51 | 112 | 6.89e-25 | 103 |
MS.gene045042.t1 | AT3G45610 | 46.237 | 93 | 50 | 0 | 102 | 194 | 5 | 97 | 9.81e-25 | 103 |
MS.gene045042.t1 | AT3G55370 | 59.420 | 69 | 28 | 0 | 133 | 201 | 72 | 140 | 2.34e-24 | 103 |
MS.gene045042.t1 | AT3G61850 | 60.000 | 70 | 28 | 0 | 125 | 194 | 50 | 119 | 2.56e-24 | 102 |
MS.gene045042.t1 | AT3G61850 | 60.000 | 70 | 28 | 0 | 125 | 194 | 50 | 119 | 2.56e-24 | 102 |
MS.gene045042.t1 | AT3G55370 | 59.420 | 69 | 28 | 0 | 133 | 201 | 72 | 140 | 2.81e-24 | 104 |
MS.gene045042.t1 | AT3G61850 | 60.000 | 70 | 28 | 0 | 125 | 194 | 62 | 131 | 3.01e-24 | 103 |
MS.gene045042.t1 | AT3G55370 | 59.420 | 69 | 28 | 0 | 133 | 201 | 117 | 185 | 3.22e-24 | 104 |
MS.gene045042.t1 | AT3G61850 | 60.000 | 70 | 28 | 0 | 125 | 194 | 62 | 131 | 4.49e-24 | 103 |
MS.gene045042.t1 | AT3G61850 | 60.000 | 70 | 28 | 0 | 125 | 194 | 50 | 119 | 4.69e-24 | 102 |
MS.gene045042.t1 | AT3G50410 | 70.175 | 57 | 17 | 0 | 137 | 193 | 30 | 86 | 8.75e-24 | 100 |
MS.gene045042.t1 | AT2G28510 | 73.214 | 56 | 15 | 0 | 139 | 194 | 50 | 105 | 1.18e-23 | 101 |
MS.gene045042.t1 | AT3G21270 | 70.909 | 55 | 16 | 0 | 137 | 191 | 29 | 83 | 1.47e-23 | 98.6 |
MS.gene045042.t1 | AT5G66940 | 35.955 | 178 | 98 | 6 | 137 | 300 | 32 | 207 | 1.51e-23 | 99.4 |
MS.gene045042.t1 | AT4G24060 | 68.421 | 57 | 18 | 0 | 134 | 190 | 50 | 106 | 1.52e-23 | 102 |
MS.gene045042.t1 | AT1G07640 | 74.510 | 51 | 13 | 0 | 139 | 189 | 23 | 73 | 4.65e-23 | 99.0 |
MS.gene045042.t1 | AT2G37590 | 56.061 | 66 | 29 | 0 | 125 | 190 | 77 | 142 | 6.12e-23 | 100 |
MS.gene045042.t1 | AT2G28810 | 62.295 | 61 | 23 | 0 | 128 | 188 | 68 | 128 | 6.47e-23 | 99.8 |
MS.gene045042.t1 | AT1G07640 | 74.510 | 51 | 13 | 0 | 139 | 189 | 79 | 129 | 7.17e-23 | 99.8 |
MS.gene045042.t1 | AT2G28810 | 48.837 | 86 | 44 | 0 | 103 | 188 | 60 | 145 | 7.64e-23 | 99.8 |
MS.gene045042.t1 | AT1G07640 | 74.510 | 51 | 13 | 0 | 139 | 189 | 87 | 137 | 9.47e-23 | 99.8 |
MS.gene045042.t1 | AT1G28310 | 72.222 | 54 | 15 | 0 | 137 | 190 | 27 | 80 | 1.22e-22 | 98.6 |
MS.gene045042.t1 | AT1G28310 | 72.222 | 54 | 15 | 0 | 137 | 190 | 51 | 104 | 1.94e-22 | 98.6 |
MS.gene045042.t1 | AT5G65590 | 67.857 | 56 | 18 | 0 | 137 | 192 | 41 | 96 | 2.40e-22 | 97.8 |
MS.gene045042.t1 | AT4G38000 | 64.407 | 59 | 20 | 1 | 136 | 193 | 40 | 98 | 2.76e-22 | 96.3 |
MS.gene045042.t1 | AT1G64620 | 67.308 | 52 | 17 | 0 | 134 | 185 | 46 | 97 | 2.85e-22 | 98.6 |
MS.gene045042.t1 | AT3G52440 | 47.674 | 86 | 39 | 2 | 111 | 190 | 12 | 97 | 3.79e-22 | 96.3 |
MS.gene045042.t1 | AT1G21340 | 63.934 | 61 | 20 | 1 | 139 | 197 | 40 | 100 | 4.10e-22 | 96.3 |
MS.gene045042.t1 | AT3G52440 | 66.667 | 57 | 18 | 1 | 135 | 190 | 22 | 78 | 7.24e-22 | 95.1 |
MS.gene045042.t1 | AT1G47655 | 71.429 | 49 | 14 | 0 | 137 | 185 | 29 | 77 | 1.24e-21 | 93.6 |
MS.gene045042.t1 | AT4G00940 | 64.407 | 59 | 21 | 0 | 132 | 190 | 63 | 121 | 1.39e-21 | 95.5 |
MS.gene045042.t1 | AT4G00940 | 64.407 | 59 | 21 | 0 | 132 | 190 | 63 | 121 | 1.39e-21 | 95.5 |
MS.gene045042.t1 | AT4G00940 | 64.407 | 59 | 21 | 0 | 132 | 190 | 63 | 121 | 1.39e-21 | 95.5 |
MS.gene045042.t1 | AT5G02460 | 63.793 | 58 | 21 | 0 | 133 | 190 | 91 | 148 | 1.96e-21 | 96.7 |
MS.gene045042.t1 | AT4G21050 | 58.209 | 67 | 28 | 0 | 124 | 190 | 11 | 77 | 6.41e-21 | 91.3 |
MS.gene045042.t1 | AT5G62940 | 71.429 | 49 | 14 | 0 | 139 | 187 | 75 | 123 | 3.84e-20 | 92.4 |
MS.gene045042.t1 | AT4G21040 | 62.264 | 53 | 20 | 0 | 139 | 191 | 27 | 79 | 2.58e-18 | 84.3 |
MS.gene045042.t1 | AT4G21080 | 60.377 | 53 | 21 | 0 | 139 | 191 | 27 | 79 | 1.33e-17 | 82.8 |
MS.gene045042.t1 | AT4G21030 | 47.059 | 68 | 34 | 1 | 139 | 206 | 23 | 88 | 1.09e-11 | 64.3 |
Find 116 sgRNAs with CRISPR-Local
Find 184 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATTCTATCCAGCAACTTAT+TGG | 0.154692 | 7.2:-86358620 | MS.gene045042:CDS |
CCAACATGAATTTCTGAAAT+AGG | 0.172204 | 7.2:+86360889 | None:intergenic |
ATTCTATCCAGCAACTTATT+GGG | 0.285556 | 7.2:-86358619 | MS.gene045042:CDS |
TTACCTAAGGTTGGAGAGTT+TGG | 0.298324 | 7.2:+86358516 | None:intergenic |
TCCTCCGAGAGGCCTCTTTC+AGG | 0.301078 | 7.2:-86358319 | MS.gene045042:CDS |
GCAAGAACTGCCAGAGATAT+TGG | 0.302290 | 7.2:-86359160 | MS.gene045042:CDS |
CACTGTAGCAACCTCCCTTT+CGG | 0.339343 | 7.2:+86359343 | None:intergenic |
GAGAGTTTGGAGTAGAGTTA+TGG | 0.354122 | 7.2:+86358529 | None:intergenic |
GACTCTGCGATCAAACTGTT+TGG | 0.377035 | 7.2:-86360922 | MS.gene045042:CDS |
ATCCTCCCCTTGTTCTTCAC+TGG | 0.395303 | 7.2:+86358854 | None:intergenic |
GTGCAAAATTACACAAGAAA+TGG | 0.400392 | 7.2:-86358918 | MS.gene045042:CDS |
TGCACCTTCCGTCGACTTTG+TGG | 0.406190 | 7.2:+86358806 | None:intergenic |
CCTTGTTCTTCACTGGTATG+AGG | 0.408705 | 7.2:+86358861 | None:intergenic |
CAACCTTAGGTAAACATTCA+AGG | 0.420791 | 7.2:-86358506 | MS.gene045042:CDS |
AACGGTACAATCCTTACATT+TGG | 0.421611 | 7.2:-86358999 | MS.gene045042:CDS |
TTCCCTTGAATGTTTACCTA+AGG | 0.425560 | 7.2:+86358503 | None:intergenic |
TCAGTTCTAGAAGTTGCATC+TGG | 0.425578 | 7.2:+86359389 | None:intergenic |
AAGCGACACTTCAGAATTCT+CGG | 0.433945 | 7.2:-86359043 | MS.gene045042:CDS |
TTCAAAGACCGAAGAAGAAC+AGG | 0.434370 | 7.2:-86359315 | MS.gene045042:CDS |
TCGCTTCTGAGACAGTTATC+TGG | 0.434484 | 7.2:+86359060 | None:intergenic |
TGTCTCGTCCTGTTCTTCTT+CGG | 0.435826 | 7.2:+86359307 | None:intergenic |
CTTGAATGTTTACCTAAGGT+TGG | 0.436109 | 7.2:+86358507 | None:intergenic |
TGTGGTTTCCTAAAACTTTG+AGG | 0.440466 | 7.2:-86358419 | MS.gene045042:CDS |
CCTAGACAATGCTGCCGGAT+TGG | 0.440986 | 7.2:+86358236 | None:intergenic |
TCATGAATCCAGAACACAAC+GGG | 0.441078 | 7.2:-86359479 | MS.gene045042:intron |
GAGTTATGGTTTGCACCATT+CGG | 0.443392 | 7.2:+86358543 | None:intergenic |
TTTCTGCGACCGGCACCTAC+TGG | 0.444047 | 7.2:+86359110 | None:intergenic |
TTCAGTCTTGCAAGCCAATC+CGG | 0.445469 | 7.2:-86358250 | MS.gene045042:CDS |
CAATAAGTTGCTGGATAGAA+TGG | 0.447382 | 7.2:+86358621 | None:intergenic |
CACCTTGTGGTGGGAAGCTA+TGG | 0.449902 | 7.2:+86358745 | None:intergenic |
GGAAAATCCTGGTGGACAAA+AGG | 0.461364 | 7.2:+86358647 | None:intergenic |
GTACAACCCCAATAAGTTGC+TGG | 0.465730 | 7.2:+86358612 | None:intergenic |
CAAAAGGCTGGTGGTGGAAT+CGG | 0.468337 | 7.2:+86358663 | None:intergenic |
CACCGGCAGTCCAATATCTC+TGG | 0.470878 | 7.2:+86359150 | None:intergenic |
GCAGTTCTTGCAGAAATGAC+GGG | 0.478653 | 7.2:+86359172 | None:intergenic |
CTCATTTGCACCGGATTCCA+TGG | 0.478888 | 7.2:+86358690 | None:intergenic |
GATTGTACCGTTGCATTTCA+AGG | 0.479174 | 7.2:+86359010 | None:intergenic |
AGCTCCTTCTGGAAAACACT+TGG | 0.480177 | 7.2:-86358369 | MS.gene045042:CDS |
TTGGCATTTACCATGGAATC+CGG | 0.481674 | 7.2:-86358700 | MS.gene045042:CDS |
ACTCCAAACTCTCCAACCTT+AGG | 0.503480 | 7.2:-86358519 | MS.gene045042:CDS |
GGCAGTTCTTGCAGAAATGA+CGG | 0.505612 | 7.2:+86359171 | None:intergenic |
ATCGGTGAGCTCATTTGCAC+CGG | 0.515419 | 7.2:+86358681 | None:intergenic |
CCTATTTCAGAAATTCATGT+TGG | 0.517045 | 7.2:-86360889 | MS.gene045042:CDS |
GTGAGTTGGATCCAAATGTA+AGG | 0.517691 | 7.2:+86358988 | None:intergenic |
AGCTTGTTCTTGAGATACAT+TGG | 0.519714 | 7.2:+86358779 | None:intergenic |
ACTCTCCTCATGGAACTCCT+TGG | 0.523580 | 7.2:-86358719 | MS.gene045042:CDS |
TTGTCCTCGTTGTAGTAGCA+TGG | 0.523986 | 7.2:-86359237 | MS.gene045042:CDS |
TGCCAGAGATATTGGACTGC+CGG | 0.524544 | 7.2:-86359152 | MS.gene045042:CDS |
CCAATCCGGCAGCATTGTCT+AGG | 0.524624 | 7.2:-86358236 | MS.gene045042:CDS |
ACCTACTGGTACGTTTCTCA+TGG | 0.524953 | 7.2:+86359124 | None:intergenic |
CGTGGAATGTTCCATGCACT+TGG | 0.526692 | 7.2:+86358585 | None:intergenic |
TACCGTTGCATTTCAAGGAA+GGG | 0.526711 | 7.2:+86359015 | None:intergenic |
GGTGGACAAAAGGCTGGTGG+TGG | 0.526864 | 7.2:+86358657 | None:intergenic |
TACGTTTCTCATGGTTCCAC+CGG | 0.531107 | 7.2:+86359133 | None:intergenic |
TGAATCACATAAAGGTGAGT+TGG | 0.531921 | 7.2:+86358974 | None:intergenic |
GATGCCACTGAATCACATAA+AGG | 0.533836 | 7.2:+86358966 | None:intergenic |
GTACCGTTGCATTTCAAGGA+AGG | 0.535966 | 7.2:+86359014 | None:intergenic |
TCTTGCAGAAATGACGGGGT+TGG | 0.542522 | 7.2:+86359177 | None:intergenic |
TTCTATCCAGCAACTTATTG+GGG | 0.547709 | 7.2:-86358618 | MS.gene045042:CDS |
TTGAAGGGAATGCCTGAAAG+AGG | 0.554322 | 7.2:+86358307 | None:intergenic |
TTTGCACCATTCGGTGATGA+TGG | 0.555092 | 7.2:+86358552 | None:intergenic |
AACCTTAGGTAAACATTCAA+GGG | 0.555927 | 7.2:-86358505 | MS.gene045042:CDS |
AATGCCTGAAAGAGGCCTCT+CGG | 0.561163 | 7.2:+86358315 | None:intergenic |
GCTCCTTCTGGAAAACACTT+GGG | 0.566174 | 7.2:-86358368 | MS.gene045042:CDS |
CACCCTTCCTTGAAATGCAA+CGG | 0.569292 | 7.2:-86359017 | MS.gene045042:CDS |
CAAGGTGGCTACTCTCCTCA+TGG | 0.573340 | 7.2:-86358729 | MS.gene045042:CDS |
AATCCTGGTGGACAAAAGGC+TGG | 0.573733 | 7.2:+86358651 | None:intergenic |
TTGTTCTTGAGATACATTGG+TGG | 0.575585 | 7.2:+86358782 | None:intergenic |
GAACTCCTTGGCATTTACCA+TGG | 0.576696 | 7.2:-86358707 | MS.gene045042:CDS |
CAAGAACAAGCTATGTGGAA+TGG | 0.577149 | 7.2:-86358768 | MS.gene045042:CDS |
CTCACCTTTATGTGATTCAG+TGG | 0.580504 | 7.2:-86358970 | MS.gene045042:CDS |
ATTCTTCTGTTGATTGTGCA+AGG | 0.584727 | 7.2:+86359420 | None:intergenic |
TATCTCAAGAACAAGCTATG+TGG | 0.592377 | 7.2:-86358773 | MS.gene045042:CDS |
TGTTACAGTATCCACCGAAA+GGG | 0.593158 | 7.2:-86359357 | MS.gene045042:CDS |
CCTCATACCAGTGAAGAACA+AGG | 0.595660 | 7.2:-86358861 | MS.gene045042:CDS |
GGCCATAGCTTCCCACCACA+AGG | 0.598341 | 7.2:-86358747 | MS.gene045042:CDS |
TAGAATGGCATGGAAAATCC+TGG | 0.600171 | 7.2:+86358636 | None:intergenic |
GGAGAGTAGCCACCTTGTGG+TGG | 0.603675 | 7.2:+86358735 | None:intergenic |
GGATCAATCAAATAAATCGT+CGG | 0.604223 | 7.2:-86358835 | MS.gene045042:CDS |
ACCTTCCGTCGACTTTGTGG+AGG | 0.610776 | 7.2:+86358809 | None:intergenic |
GGATTCCATGGTAAATGCCA+AGG | 0.611774 | 7.2:+86358702 | None:intergenic |
CTGTTACAGTATCCACCGAA+AGG | 0.612746 | 7.2:-86359358 | MS.gene045042:CDS |
CTAAAATCAAGCGAAGGAGA+TGG | 0.613491 | 7.2:-86358471 | MS.gene045042:CDS |
TTAGCGAAGAAAAGAGCTTG+TGG | 0.614398 | 7.2:-86358437 | MS.gene045042:CDS |
GATGATGGCTGTGCTTGTCG+TGG | 0.616323 | 7.2:+86358567 | None:intergenic |
TGTAGCAACCTCCCTTTCGG+TGG | 0.616915 | 7.2:+86359346 | None:intergenic |
AGCGACCTAGACAATGCTGC+CGG | 0.618284 | 7.2:+86358231 | None:intergenic |
GAGAGTAGCCACCTTGTGGT+GGG | 0.619044 | 7.2:+86358736 | None:intergenic |
GCCTCTCGGAGGAACTGAGT+CGG | 0.622528 | 7.2:+86358329 | None:intergenic |
TTTGAGGATTGATGACTCTG+AGG | 0.623626 | 7.2:-86358403 | MS.gene045042:CDS |
ATGCTACTACAACGAGGACA+AGG | 0.624918 | 7.2:+86359239 | None:intergenic |
AGTTGCTGGATAGAATGGCA+TGG | 0.625575 | 7.2:+86358626 | None:intergenic |
CAGTTCTTGCAGAAATGACG+GGG | 0.628674 | 7.2:+86359173 | None:intergenic |
GTTGTACTATGCCAAGTGCA+TGG | 0.629999 | 7.2:-86358596 | MS.gene045042:CDS |
TACCAGTGAAGAACAAGGGG+AGG | 0.634191 | 7.2:-86358856 | MS.gene045042:CDS |
TACAGTATCCACCGAAAGGG+AGG | 0.634842 | 7.2:-86359354 | MS.gene045042:CDS |
ACCTCCACAAAGTCGACGGA+AGG | 0.636006 | 7.2:-86358810 | MS.gene045042:CDS |
ACAAGAACATGAGATTGAGA+AGG | 0.637128 | 7.2:-86360776 | MS.gene045042:intron |
AACATGCTAAAATCAAGCGA+AGG | 0.639475 | 7.2:-86358477 | MS.gene045042:CDS |
TGAGGAGAGTAGCCACCTTG+TGG | 0.641432 | 7.2:+86358732 | None:intergenic |
CTCATACCAGTGAAGAACAA+GGG | 0.644364 | 7.2:-86358860 | MS.gene045042:CDS |
TCATACCAGTGAAGAACAAG+GGG | 0.646136 | 7.2:-86358859 | MS.gene045042:CDS |
AGAAACGTACCAGTAGGTGC+CGG | 0.653444 | 7.2:-86359119 | MS.gene045042:CDS |
CAGAGATATTGGACTGCCGG+TGG | 0.661022 | 7.2:-86359149 | MS.gene045042:CDS |
GGTTACCTCCACAAAGTCGA+CGG | 0.667234 | 7.2:-86358814 | MS.gene045042:CDS |
GCACAGCCATCATCACCGAA+TGG | 0.676467 | 7.2:-86358558 | MS.gene045042:CDS |
GCCTGAAAGAGGCCTCTCGG+AGG | 0.678203 | 7.2:+86358318 | None:intergenic |
CCTGGTGGACAAAAGGCTGG+TGG | 0.697756 | 7.2:+86358654 | None:intergenic |
ACCATGAGAAACGTACCAGT+AGG | 0.705884 | 7.2:-86359125 | MS.gene045042:CDS |
ACCGACTCAGTTCCTCCGAG+AGG | 0.712079 | 7.2:-86358330 | MS.gene045042:CDS |
GGACGAGACAAGTAACACAC+AGG | 0.712817 | 7.2:-86359294 | MS.gene045042:CDS |
AATGGCATGGAAAATCCTGG+TGG | 0.713044 | 7.2:+86358639 | None:intergenic |
CATAGCTTCCCACCACAAGG+TGG | 0.714183 | 7.2:-86358744 | MS.gene045042:CDS |
TTCATGAATCCAGAACACAA+CGG | 0.740548 | 7.2:-86359480 | MS.gene045042:intron |
AAATGCCAAGGAGTTCCATG+AGG | 0.746770 | 7.2:+86358714 | None:intergenic |
GTGTCCATGCTACTACAACG+AGG | 0.808267 | 7.2:+86359233 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTAAACTACATAGTATAATT+TGG | + | chr7.2:86358676-86358695 | None:intergenic | 15.0% |
!! | TTTATTTCATATACCAAATA+AGG | + | chr7.2:86358759-86358778 | None:intergenic | 15.0% |
!!! | AATAATTTTTTCACTTTTCA+AGG | - | chr7.2:86358582-86358601 | MS.gene045042:CDS | 15.0% |
!!! | ATATGAGAATTTTGATTTTT+TGG | - | chr7.2:86358400-86358419 | MS.gene045042:CDS | 15.0% |
!!! | TAAGTTTTTGAAGTTATATT+TGG | - | chr7.2:86358693-86358712 | MS.gene045042:CDS | 15.0% |
!!! | TTCTTTTTATGATATTAATG+TGG | - | chr7.2:86359596-86359615 | MS.gene045042:intron | 15.0% |
!! | ATTCTTCCATTTCAAATAAA+GGG | + | chr7.2:86358453-86358472 | None:intergenic | 20.0% |
!! | ATTGAAAGAATTACCTTATT+TGG | - | chr7.2:86358743-86358762 | MS.gene045042:CDS | 20.0% |
!! | CATGAATAAATACTAATCTT+TGG | - | chr7.2:86359641-86359660 | MS.gene045042:intron | 20.0% |
!! | GAAATGGAAGAATATTTAAT+GGG | - | chr7.2:86358460-86358479 | MS.gene045042:CDS | 20.0% |
!! | TATTCTTCCATTTCAAATAA+AGG | + | chr7.2:86358454-86358473 | None:intergenic | 20.0% |
!! | TGAAATGGAAGAATATTTAA+TGG | - | chr7.2:86358459-86358478 | MS.gene045042:CDS | 20.0% |
!! | TTTATTGCGAAAAAAACATT+TGG | + | chr7.2:86359464-86359483 | None:intergenic | 20.0% |
!!! | AAATCATGTTAGTTTATGTT+CGG | + | chr7.2:86359049-86359068 | None:intergenic | 20.0% |
!! | ATTTTGGATTGTTTTCAATC+TGG | - | chr7.2:86358619-86358638 | MS.gene045042:CDS | 25.0% |
!! | TTATGACCCTTTATTTGAAA+TGG | - | chr7.2:86358444-86358463 | MS.gene045042:CDS | 25.0% |
!! | TTTGAAGTTATATTTGGCTT+TGG | - | chr7.2:86358699-86358718 | MS.gene045042:CDS | 25.0% |
!! | TTTTGGATTGTTTTCAATCT+GGG | - | chr7.2:86358620-86358639 | MS.gene045042:CDS | 25.0% |
!!! | AAAATTCATTTGACTTGCTT+TGG | - | chr7.2:86358510-86358529 | MS.gene045042:CDS | 25.0% |
!!! | AACTGTCGAATTTTAAAAAC+TGG | - | chr7.2:86359132-86359151 | MS.gene045042:CDS | 25.0% |
!!! | CTTTTTCTTGTTTGACTTTT+GGG | - | chr7.2:86359081-86359100 | MS.gene045042:CDS | 25.0% |
!!! | GGTGAAGTTTTATTTTTTCA+TGG | - | chr7.2:86358720-86358739 | MS.gene045042:CDS | 25.0% |
!!! | TTTAAAATTCGACAGTTTTC+TGG | + | chr7.2:86359129-86359148 | None:intergenic | 25.0% |
!!! | TTTGACTTTTGGGTTTTATA+TGG | - | chr7.2:86359091-86359110 | MS.gene045042:CDS | 25.0% |
AAAACTGAAATTCGTCAAAG+TGG | + | chr7.2:86359211-86359230 | None:intergenic | 30.0% | |
AACCTTAGGTAAACATTCAA+GGG | - | chr7.2:86360641-86360660 | MS.gene045042:intron | 30.0% | |
ATTCTATCCAGCAACTTATT+GGG | - | chr7.2:86360527-86360546 | MS.gene045042:intron | 30.0% | |
CACAAACTGATACAAAAACA+AGG | - | chr7.2:86359335-86359354 | MS.gene045042:CDS | 30.0% | |
CCTATTTCAGAAATTCATGT+TGG | - | chr7.2:86358257-86358276 | MS.gene045042:CDS | 30.0% | |
GGATCAATCAAATAAATCGT+CGG | - | chr7.2:86360311-86360330 | MS.gene045042:intron | 30.0% | |
GTGCAAAATTACACAAGAAA+TGG | - | chr7.2:86360228-86360247 | MS.gene045042:intron | 30.0% | |
TCGAATAAAAAGAACGAAGA+TGG | - | chr7.2:86359700-86359719 | MS.gene045042:intron | 30.0% | |
TTAGTTTATGTTCGGAATCA+CGG | + | chr7.2:86359041-86359060 | None:intergenic | 30.0% | |
! | GAAGCTATTGAAAGTGATTT+TGG | - | chr7.2:86358922-86358941 | MS.gene045042:CDS | 30.0% |
! | TCATCAATCCTCAAAGTTTT+AGG | + | chr7.2:86360738-86360757 | None:intergenic | 30.0% |
! | TGGAAGAATATTTAATGGGT+TGG | - | chr7.2:86358464-86358483 | MS.gene045042:CDS | 30.0% |
!! | CCAACATGAATTTCTGAAAT+AGG | + | chr7.2:86358260-86358279 | None:intergenic | 30.0% |
!! | GCTTTTTCTTGTTTGACTTT+TGG | - | chr7.2:86359080-86359099 | MS.gene045042:CDS | 30.0% |
!! | GGAGTTTCAATGTTTGATTT+TGG | - | chr7.2:86358603-86358622 | MS.gene045042:CDS | 30.0% |
AAACACCAGACATTAAACCA+AGG | + | chr7.2:86359243-86359262 | None:intergenic | 35.0% | |
AACACCAGACATTAAACCAA+GGG | + | chr7.2:86359242-86359261 | None:intergenic | 35.0% | |
AACATGCTAAAATCAAGCGA+AGG | - | chr7.2:86360669-86360688 | MS.gene045042:intron | 35.0% | |
AACGGTACAATCCTTACATT+TGG | - | chr7.2:86360147-86360166 | MS.gene045042:intron | 35.0% | |
AATTCCCTTGGTTTAATGTC+TGG | - | chr7.2:86359235-86359254 | MS.gene045042:CDS | 35.0% | |
ACAAGAACATGAGATTGAGA+AGG | - | chr7.2:86358370-86358389 | MS.gene045042:CDS | 35.0% | |
ACCTTGTTGATGCTAGAATT+AGG | - | chr7.2:86358900-86358919 | MS.gene045042:CDS | 35.0% | |
CAACCTTAGGTAAACATTCA+AGG | - | chr7.2:86360640-86360659 | MS.gene045042:intron | 35.0% | |
CAATAAGTTGCTGGATAGAA+TGG | + | chr7.2:86360528-86360547 | None:intergenic | 35.0% | |
CAGTTTGTGTAGAATCTGTT+AGG | + | chr7.2:86359324-86359343 | None:intergenic | 35.0% | |
CATTAGCAGTAGACTCAATA+TGG | + | chr7.2:86359377-86359396 | None:intergenic | 35.0% | |
CATTCTATCCAGCAACTTAT+TGG | - | chr7.2:86360526-86360545 | MS.gene045042:intron | 35.0% | |
CTTGAATGTTTACCTAAGGT+TGG | + | chr7.2:86360642-86360661 | None:intergenic | 35.0% | |
GTTAGGAAACATCGAATGAT+AGG | + | chr7.2:86359307-86359326 | None:intergenic | 35.0% | |
TATCTCAAGAACAAGCTATG+TGG | - | chr7.2:86360373-86360392 | MS.gene045042:intron | 35.0% | |
TCCTAATTCTAGCATCAACA+AGG | + | chr7.2:86358904-86358923 | None:intergenic | 35.0% | |
TCGAATGATAGGATCCAATT+TGG | + | chr7.2:86359296-86359315 | None:intergenic | 35.0% | |
TGAATCACATAAAGGTGAGT+TGG | + | chr7.2:86360175-86360194 | None:intergenic | 35.0% | |
TGTGGTTTCCTAAAACTTTG+AGG | - | chr7.2:86360727-86360746 | MS.gene045042:intron | 35.0% | |
TTAATGTCTGGTGTTTGTGT+CGG | - | chr7.2:86359247-86359266 | MS.gene045042:CDS | 35.0% | |
TTCACGAAATCATGGTAACA+CGG | + | chr7.2:86359013-86359032 | None:intergenic | 35.0% | |
TTCATGAATCCAGAACACAA+CGG | - | chr7.2:86359666-86359685 | MS.gene045042:intron | 35.0% | |
TTCCCTTGAATGTTTACCTA+AGG | + | chr7.2:86360646-86360665 | None:intergenic | 35.0% | |
TTCTATCCAGCAACTTATTG+GGG | - | chr7.2:86360528-86360547 | MS.gene045042:intron | 35.0% | |
TTGTTCTTGAGATACATTGG+TGG | + | chr7.2:86360367-86360386 | None:intergenic | 35.0% | |
! | AGCTTGTTCTTGAGATACAT+TGG | + | chr7.2:86360370-86360389 | None:intergenic | 35.0% |
! | ATTCGACAGTTTTCTGGATT+TGG | + | chr7.2:86359123-86359142 | None:intergenic | 35.0% |
! | ATTCTTCTGTTGATTGTGCA+AGG | + | chr7.2:86359729-86359748 | None:intergenic | 35.0% |
! | CTATTTTGTCCGGTTTTTTG+AGG | + | chr7.2:86359885-86359904 | None:intergenic | 35.0% |
! | TCAGTTTTACTCAATTCCCT+TGG | - | chr7.2:86359223-86359242 | MS.gene045042:CDS | 35.0% |
! | TTTTCTCGTCACACTTTGAA+GGG | + | chr7.2:86360857-86360876 | None:intergenic | 35.0% |
! | TTTTTCTCGTCACACTTTGA+AGG | + | chr7.2:86360858-86360877 | None:intergenic | 35.0% |
AAGCAGAAAAAAGCTCCTTC+TGG | - | chr7.2:86360766-86360785 | MS.gene045042:intron | 40.0% | |
AAGCGACACTTCAGAATTCT+CGG | - | chr7.2:86360103-86360122 | MS.gene045042:intron | 40.0% | |
ACTCTTGTAACTCTCAGTTC+AGG | - | chr7.2:86358870-86358889 | MS.gene045042:CDS | 40.0% | |
CAAGAACAAGCTATGTGGAA+TGG | - | chr7.2:86360378-86360397 | MS.gene045042:intron | 40.0% | |
CGGTGAATTTCACGAAATCA+TGG | + | chr7.2:86359021-86359040 | None:intergenic | 40.0% | |
CTAAAATCAAGCGAAGGAGA+TGG | - | chr7.2:86360675-86360694 | MS.gene045042:intron | 40.0% | |
CTCACCTTTATGTGATTCAG+TGG | - | chr7.2:86360176-86360195 | MS.gene045042:intron | 40.0% | |
CTCATACCAGTGAAGAACAA+GGG | - | chr7.2:86360286-86360305 | MS.gene045042:intron | 40.0% | |
GAACTGAGAGTTACAAGAGT+TGG | + | chr7.2:86358870-86358889 | None:intergenic | 40.0% | |
GATGCCACTGAATCACATAA+AGG | + | chr7.2:86360183-86360202 | None:intergenic | 40.0% | |
GATTGTACCGTTGCATTTCA+AGG | + | chr7.2:86360139-86360158 | None:intergenic | 40.0% | |
GGAATCTGCTCAAAGATGTT+AGG | + | chr7.2:86359158-86359177 | None:intergenic | 40.0% | |
GGATAAGCACCTCAAAAAAC+CGG | - | chr7.2:86359873-86359892 | MS.gene045042:intron | 40.0% | |
GGGGATTAACTCATCCAAAT+TGG | - | chr7.2:86359279-86359298 | MS.gene045042:CDS | 40.0% | |
GTGTGACGAGAAAAATCACT+CGG | - | chr7.2:86360863-86360882 | MS.gene045042:CDS | 40.0% | |
TACCGTTGCATTTCAAGGAA+GGG | + | chr7.2:86360134-86360153 | None:intergenic | 40.0% | |
TAGAATGGCATGGAAAATCC+TGG | + | chr7.2:86360513-86360532 | None:intergenic | 40.0% | |
TCATACCAGTGAAGAACAAG+GGG | - | chr7.2:86360287-86360306 | MS.gene045042:intron | 40.0% | |
TCATGAATCCAGAACACAAC+GGG | - | chr7.2:86359667-86359686 | MS.gene045042:intron | 40.0% | |
TGTTACAGTATCCACCGAAA+GGG | - | chr7.2:86359789-86359808 | MS.gene045042:intron | 40.0% | |
TTACCTAAGGTTGGAGAGTT+TGG | + | chr7.2:86360633-86360652 | None:intergenic | 40.0% | |
TTAGCGAAGAAAAGAGCTTG+TGG | - | chr7.2:86360709-86360728 | MS.gene045042:intron | 40.0% | |
TTCAAAGACCGAAGAAGAAC+AGG | - | chr7.2:86359831-86359850 | MS.gene045042:intron | 40.0% | |
TTGGCATTTACCATGGAATC+CGG | - | chr7.2:86360446-86360465 | MS.gene045042:intron | 40.0% | |
TTTGTTGAAGCTCGAAAGTG+TGG | + | chr7.2:86358980-86358999 | None:intergenic | 40.0% | |
! | AATCCCAAGTGTTTTCCAGA+AGG | + | chr7.2:86360784-86360803 | None:intergenic | 40.0% |
! | GAGAGTTTGGAGTAGAGTTA+TGG | + | chr7.2:86360620-86360639 | None:intergenic | 40.0% |
! | GAGTTATGGTTTGCACCATT+CGG | + | chr7.2:86360606-86360625 | None:intergenic | 40.0% |
! | GGACAAGGAACTATTTTGTC+CGG | + | chr7.2:86359895-86359914 | None:intergenic | 40.0% |
! | GTGAGTTGGATCCAAATGTA+AGG | + | chr7.2:86360161-86360180 | None:intergenic | 40.0% |
! | TTTGAGGATTGATGACTCTG+AGG | - | chr7.2:86360743-86360762 | MS.gene045042:intron | 40.0% |
!! | TCAGTTCTAGAAGTTGCATC+TGG | + | chr7.2:86359760-86359779 | None:intergenic | 40.0% |
AAATGCCAAGGAGTTCCATG+AGG | + | chr7.2:86360435-86360454 | None:intergenic | 45.0% | |
AATGGCATGGAAAATCCTGG+TGG | + | chr7.2:86360510-86360529 | None:intergenic | 45.0% | |
ACCATGAGAAACGTACCAGT+AGG | - | chr7.2:86360021-86360040 | MS.gene045042:intron | 45.0% | |
ACCTACTGGTACGTTTCTCA+TGG | + | chr7.2:86360025-86360044 | None:intergenic | 45.0% | |
ACTCCAAACTCTCCAACCTT+AGG | - | chr7.2:86360627-86360646 | MS.gene045042:intron | 45.0% | |
AGTTGCTGGATAGAATGGCA+TGG | + | chr7.2:86360523-86360542 | None:intergenic | 45.0% | |
ATGCTACTACAACGAGGACA+AGG | + | chr7.2:86359910-86359929 | None:intergenic | 45.0% | |
CACCCTTCCTTGAAATGCAA+CGG | - | chr7.2:86360129-86360148 | MS.gene045042:intron | 45.0% | |
CAGAACAGAGCATATGAAGC+AGG | + | chr7.2:86359179-86359198 | None:intergenic | 45.0% | |
CAGTTCTTGCAGAAATGACG+GGG | + | chr7.2:86359976-86359995 | None:intergenic | 45.0% | |
CCTCATACCAGTGAAGAACA+AGG | - | chr7.2:86360285-86360304 | MS.gene045042:intron | 45.0% | |
CCTTGTTCTTCACTGGTATG+AGG | + | chr7.2:86360288-86360307 | None:intergenic | 45.0% | |
CTGTTACAGTATCCACCGAA+AGG | - | chr7.2:86359788-86359807 | MS.gene045042:intron | 45.0% | |
GAACTCCTTGGCATTTACCA+TGG | - | chr7.2:86360439-86360458 | MS.gene045042:intron | 45.0% | |
GACTCTGCGATCAAACTGTT+TGG | - | chr7.2:86358224-86358243 | MS.gene045042:CDS | 45.0% | |
GCAAGAACTGCCAGAGATAT+TGG | - | chr7.2:86359986-86360005 | MS.gene045042:intron | 45.0% | |
GCAGTTCTTGCAGAAATGAC+GGG | + | chr7.2:86359977-86359996 | None:intergenic | 45.0% | |
GGATTCCATGGTAAATGCCA+AGG | + | chr7.2:86360447-86360466 | None:intergenic | 45.0% | |
GGCAGTTCTTGCAGAAATGA+CGG | + | chr7.2:86359978-86359997 | None:intergenic | 45.0% | |
GTACAACCCCAATAAGTTGC+TGG | + | chr7.2:86360537-86360556 | None:intergenic | 45.0% | |
GTACCGTTGCATTTCAAGGA+AGG | + | chr7.2:86360135-86360154 | None:intergenic | 45.0% | |
GTCTACTGCTAATGCTCTCA+TGG | - | chr7.2:86359383-86359402 | MS.gene045042:CDS | 45.0% | |
GTTGTACTATGCCAAGTGCA+TGG | - | chr7.2:86360550-86360569 | MS.gene045042:intron | 45.0% | |
TACGTTTCTCATGGTTCCAC+CGG | + | chr7.2:86360016-86360035 | None:intergenic | 45.0% | |
TGTCTCGTCCTGTTCTTCTT+CGG | + | chr7.2:86359842-86359861 | None:intergenic | 45.0% | |
TTCAGTCTTGCAAGCCAATC+CGG | - | chr7.2:86360896-86360915 | MS.gene045042:CDS | 45.0% | |
TTGAAGGGAATGCCTGAAAG+AGG | + | chr7.2:86360842-86360861 | None:intergenic | 45.0% | |
TTGTCCTCGTTGTAGTAGCA+TGG | - | chr7.2:86359909-86359928 | MS.gene045042:intron | 45.0% | |
! | AGCTCCTTCTGGAAAACACT+TGG | - | chr7.2:86360777-86360796 | MS.gene045042:CDS | 45.0% |
! | GCTCCTTCTGGAAAACACTT+GGG | - | chr7.2:86360778-86360797 | MS.gene045042:CDS | 45.0% |
! | GGAAAATCCTGGTGGACAAA+AGG | + | chr7.2:86360502-86360521 | None:intergenic | 45.0% |
! | GTTTGTGTCGGTGCTTCATA+GGG | - | chr7.2:86359259-86359278 | MS.gene045042:CDS | 45.0% |
! | GTTTTTCTCCCGTTGTGTTC+TGG | + | chr7.2:86359678-86359697 | None:intergenic | 45.0% |
! | TGTTTGTGTCGGTGCTTCAT+AGG | - | chr7.2:86359258-86359277 | MS.gene045042:CDS | 45.0% |
! | TTTGCACCATTCGGTGATGA+TGG | + | chr7.2:86360597-86360616 | None:intergenic | 45.0% |
! | TTTGTGTCGGTGCTTCATAG+GGG | - | chr7.2:86359260-86359279 | MS.gene045042:CDS | 45.0% |
!! | TCGCTTCTGAGACAGTTATC+TGG | + | chr7.2:86360089-86360108 | None:intergenic | 45.0% |
!!! | GCTCTTGTTTTTTCTGCGAC+CGG | + | chr7.2:86360049-86360068 | None:intergenic | 45.0% |
AATGCCTGAAAGAGGCCTCT+CGG | + | chr7.2:86360834-86360853 | None:intergenic | 50.0% | |
ACTCTCCTCATGGAACTCCT+TGG | - | chr7.2:86360427-86360446 | MS.gene045042:intron | 50.0% | |
AGAAACGTACCAGTAGGTGC+CGG | - | chr7.2:86360027-86360046 | MS.gene045042:intron | 50.0% | |
ATCCTCCCCTTGTTCTTCAC+TGG | + | chr7.2:86360295-86360314 | None:intergenic | 50.0% | |
ATCGGTGAGCTCATTTGCAC+CGG | + | chr7.2:86360468-86360487 | None:intergenic | 50.0% | |
CACTGTAGCAACCTCCCTTT+CGG | + | chr7.2:86359806-86359825 | None:intergenic | 50.0% | |
CGTGGAATGTTCCATGCACT+TGG | + | chr7.2:86360564-86360583 | None:intergenic | 50.0% | |
CTCATTTGCACCGGATTCCA+TGG | + | chr7.2:86360459-86360478 | None:intergenic | 50.0% | |
GGACGAGACAAGTAACACAC+AGG | - | chr7.2:86359852-86359871 | MS.gene045042:intron | 50.0% | |
GGTTACCTCCACAAAGTCGA+CGG | - | chr7.2:86360332-86360351 | MS.gene045042:intron | 50.0% | |
GTGTCCATGCTACTACAACG+AGG | + | chr7.2:86359916-86359935 | None:intergenic | 50.0% | |
TACAGTATCCACCGAAAGGG+AGG | - | chr7.2:86359792-86359811 | MS.gene045042:intron | 50.0% | |
TACCAGTGAAGAACAAGGGG+AGG | - | chr7.2:86360290-86360309 | MS.gene045042:intron | 50.0% | |
TGCCAGAGATATTGGACTGC+CGG | - | chr7.2:86359994-86360013 | MS.gene045042:intron | 50.0% | |
! | AATCCTGGTGGACAAAAGGC+TGG | + | chr7.2:86360498-86360517 | None:intergenic | 50.0% |
! | TCTTGCAGAAATGACGGGGT+TGG | + | chr7.2:86359972-86359991 | None:intergenic | 50.0% |
!! | CAAAAGGCTGGTGGTGGAAT+CGG | + | chr7.2:86360486-86360505 | None:intergenic | 50.0% |
ACCTCCACAAAGTCGACGGA+AGG | - | chr7.2:86360336-86360355 | MS.gene045042:intron | 55.0% | |
AGCGACCTAGACAATGCTGC+CGG | + | chr7.2:86360918-86360937 | None:intergenic | 55.0% | |
CAAGGTGGCTACTCTCCTCA+TGG | - | chr7.2:86360417-86360436 | MS.gene045042:intron | 55.0% | |
CACCGGCAGTCCAATATCTC+TGG | + | chr7.2:86359999-86360018 | None:intergenic | 55.0% | |
CAGAGATATTGGACTGCCGG+TGG | - | chr7.2:86359997-86360016 | MS.gene045042:intron | 55.0% | |
CATAGCTTCCCACCACAAGG+TGG | - | chr7.2:86360402-86360421 | MS.gene045042:intron | 55.0% | |
CCAATCCGGCAGCATTGTCT+AGG | - | chr7.2:86360910-86360929 | MS.gene045042:CDS | 55.0% | |
CCTAGACAATGCTGCCGGAT+TGG | + | chr7.2:86360913-86360932 | None:intergenic | 55.0% | |
GAGAGTAGCCACCTTGTGGT+GGG | + | chr7.2:86360413-86360432 | None:intergenic | 55.0% | |
GCACAGCCATCATCACCGAA+TGG | - | chr7.2:86360588-86360607 | MS.gene045042:intron | 55.0% | |
TGAGGAGAGTAGCCACCTTG+TGG | + | chr7.2:86360417-86360436 | None:intergenic | 55.0% | |
TGTAGCAACCTCCCTTTCGG+TGG | + | chr7.2:86359803-86359822 | None:intergenic | 55.0% | |
! | CACCTTGTGGTGGGAAGCTA+TGG | + | chr7.2:86360404-86360423 | None:intergenic | 55.0% |
! | GATGATGGCTGTGCTTGTCG+TGG | + | chr7.2:86360582-86360601 | None:intergenic | 55.0% |
!! | ACCTTCCGTCGACTTTGTGG+AGG | + | chr7.2:86360340-86360359 | None:intergenic | 55.0% |
!! | TGCACCTTCCGTCGACTTTG+TGG | + | chr7.2:86360343-86360362 | None:intergenic | 55.0% |
GCCTCTCGGAGGAACTGAGT+CGG | + | chr7.2:86360820-86360839 | None:intergenic | 60.0% | |
GGAGAGTAGCCACCTTGTGG+TGG | + | chr7.2:86360414-86360433 | None:intergenic | 60.0% | |
GGCCATAGCTTCCCACCACA+AGG | - | chr7.2:86360399-86360418 | MS.gene045042:intron | 60.0% | |
GGTGGACAAAAGGCTGGTGG+TGG | + | chr7.2:86360492-86360511 | None:intergenic | 60.0% | |
TCCTCCGAGAGGCCTCTTTC+AGG | - | chr7.2:86360827-86360846 | MS.gene045042:CDS | 60.0% | |
TTTCTGCGACCGGCACCTAC+TGG | + | chr7.2:86360039-86360058 | None:intergenic | 60.0% | |
! | ACCGACTCAGTTCCTCCGAG+AGG | - | chr7.2:86360816-86360835 | MS.gene045042:CDS | 60.0% |
! | CCACCAGCCTTTTGTCCACC+AGG | - | chr7.2:86360492-86360511 | MS.gene045042:intron | 60.0% |
! | CCTGGTGGACAAAAGGCTGG+TGG | + | chr7.2:86360495-86360514 | None:intergenic | 60.0% |
GCCTGAAAGAGGCCTCTCGG+AGG | + | chr7.2:86360831-86360850 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.2 | gene | 86358209 | 86360959 | 86358209 | ID=MS.gene045042 |
chr7.2 | mRNA | 86358209 | 86360959 | 86358209 | ID=MS.gene045042.t1;Parent=MS.gene045042 |
chr7.2 | exon | 86360777 | 86360959 | 86360777 | ID=MS.gene045042.t1.exon1;Parent=MS.gene045042.t1 |
chr7.2 | CDS | 86360777 | 86360959 | 86360777 | ID=cds.MS.gene045042.t1;Parent=MS.gene045042.t1 |
chr7.2 | exon | 86358209 | 86359489 | 86358209 | ID=MS.gene045042.t1.exon2;Parent=MS.gene045042.t1 |
chr7.2 | CDS | 86358209 | 86359489 | 86358209 | ID=cds.MS.gene045042.t1;Parent=MS.gene045042.t1 |
Gene Sequence |
Protein sequence |