Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045288.t1 | XP_003601767.2 | 94.2 | 447 | 13 | 1 | 1 | 447 | 1 | 434 | 2.30E-226 | 794.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045288.t1 | A2YGR5 | 40.7 | 415 | 194 | 10 | 1 | 379 | 6 | 404 | 1.7e-52 | 208.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045288.t1 | G7JBG3 | 94.2 | 447 | 13 | 1 | 1 | 447 | 1 | 434 | 1.6e-226 | 794.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene045288.t1 | TF | SBP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045288.t1 | MTR_3g085180 | 94.183 | 447 | 13 | 1 | 1 | 447 | 1 | 434 | 0.0 | 863 |
| MS.gene045288.t1 | MTR_8g080670 | 51.395 | 430 | 165 | 10 | 1 | 412 | 1 | 404 | 2.08e-110 | 332 |
| MS.gene045288.t1 | MTR_8g080680 | 46.785 | 451 | 173 | 9 | 1 | 438 | 1 | 397 | 4.17e-109 | 328 |
| MS.gene045288.t1 | MTR_8g080690 | 51.225 | 408 | 157 | 11 | 1 | 398 | 1 | 376 | 5.43e-106 | 319 |
| MS.gene045288.t1 | MTR_1g053715 | 38.545 | 275 | 143 | 7 | 115 | 381 | 18 | 274 | 7.45e-40 | 146 |
| MS.gene045288.t1 | MTR_5g046670 | 41.827 | 208 | 112 | 4 | 39 | 240 | 115 | 319 | 1.06e-39 | 149 |
| MS.gene045288.t1 | MTR_7g444860 | 48.447 | 161 | 79 | 3 | 93 | 249 | 73 | 233 | 6.93e-38 | 140 |
| MS.gene045288.t1 | MTR_7g092930 | 36.207 | 290 | 125 | 8 | 120 | 387 | 17 | 268 | 1.78e-37 | 140 |
| MS.gene045288.t1 | MTR_8g463140 | 70.000 | 80 | 24 | 0 | 163 | 242 | 63 | 142 | 7.57e-36 | 130 |
| MS.gene045288.t1 | MTR_3g099080 | 49.606 | 127 | 61 | 3 | 151 | 276 | 83 | 207 | 2.48e-35 | 135 |
| MS.gene045288.t1 | MTR_4g109770 | 50.781 | 128 | 56 | 2 | 117 | 240 | 74 | 198 | 3.67e-35 | 136 |
| MS.gene045288.t1 | MTR_2g078770 | 61.798 | 89 | 34 | 0 | 150 | 238 | 43 | 131 | 1.48e-34 | 127 |
| MS.gene045288.t1 | MTR_4g088555 | 55.963 | 109 | 32 | 1 | 130 | 238 | 44 | 136 | 1.67e-34 | 126 |
| MS.gene045288.t1 | MTR_8g005960 | 48.684 | 152 | 63 | 3 | 118 | 261 | 147 | 291 | 6.22e-34 | 130 |
| MS.gene045288.t1 | MTR_7g028740 | 59.341 | 91 | 34 | 1 | 154 | 244 | 69 | 156 | 1.13e-32 | 127 |
| MS.gene045288.t1 | MTR_8g096780 | 56.311 | 103 | 42 | 2 | 164 | 266 | 98 | 197 | 2.18e-32 | 127 |
| MS.gene045288.t1 | MTR_2g014200 | 57.895 | 95 | 39 | 1 | 148 | 242 | 48 | 141 | 5.01e-32 | 119 |
| MS.gene045288.t1 | MTR_2g461920 | 60.000 | 90 | 36 | 0 | 151 | 240 | 157 | 246 | 1.13e-30 | 124 |
| MS.gene045288.t1 | MTR_1g086250 | 56.842 | 95 | 41 | 0 | 150 | 244 | 132 | 226 | 3.94e-29 | 121 |
| MS.gene045288.t1 | MTR_2g046550 | 47.934 | 121 | 55 | 2 | 134 | 247 | 102 | 221 | 1.82e-28 | 119 |
| MS.gene045288.t1 | MTR_1g035010 | 58.621 | 87 | 36 | 0 | 163 | 249 | 102 | 188 | 2.96e-28 | 118 |
| MS.gene045288.t1 | MTR_7g110320 | 61.250 | 80 | 31 | 0 | 165 | 244 | 145 | 224 | 1.97e-26 | 113 |
| MS.gene045288.t1 | MTR_7g110320 | 61.250 | 80 | 31 | 0 | 165 | 244 | 145 | 224 | 2.82e-26 | 112 |
| MS.gene045288.t1 | MTR_2g020620 | 52.239 | 67 | 32 | 0 | 172 | 238 | 97 | 163 | 1.99e-16 | 82.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045288.t1 | AT5G43270 | 39.031 | 392 | 167 | 16 | 1 | 366 | 1 | 346 | 7.10e-55 | 188 |
| MS.gene045288.t1 | AT5G43270 | 39.031 | 392 | 167 | 16 | 1 | 366 | 1 | 346 | 7.10e-55 | 188 |
| MS.gene045288.t1 | AT5G43270 | 39.031 | 392 | 167 | 16 | 1 | 366 | 1 | 346 | 7.10e-55 | 188 |
| MS.gene045288.t1 | AT1G27370 | 47.674 | 258 | 110 | 7 | 1 | 240 | 1 | 251 | 1.61e-53 | 182 |
| MS.gene045288.t1 | AT1G27370 | 47.674 | 258 | 110 | 7 | 1 | 240 | 1 | 251 | 5.76e-53 | 182 |
| MS.gene045288.t1 | AT1G27370 | 47.674 | 258 | 110 | 7 | 1 | 240 | 1 | 251 | 5.76e-53 | 182 |
| MS.gene045288.t1 | AT1G27370 | 47.674 | 258 | 110 | 7 | 1 | 240 | 1 | 251 | 5.76e-53 | 182 |
| MS.gene045288.t1 | AT1G27370 | 47.674 | 258 | 110 | 7 | 1 | 240 | 1 | 251 | 5.76e-53 | 182 |
| MS.gene045288.t1 | AT1G27370 | 47.674 | 258 | 110 | 7 | 1 | 240 | 1 | 251 | 5.76e-53 | 182 |
| MS.gene045288.t1 | AT1G27370 | 47.674 | 258 | 110 | 7 | 1 | 240 | 1 | 251 | 5.76e-53 | 182 |
| MS.gene045288.t1 | AT1G27360 | 38.402 | 388 | 200 | 14 | 1 | 366 | 1 | 371 | 1.23e-51 | 179 |
| MS.gene045288.t1 | AT1G27360 | 38.402 | 388 | 200 | 14 | 1 | 366 | 1 | 371 | 1.23e-51 | 179 |
| MS.gene045288.t1 | AT1G27360 | 38.402 | 388 | 200 | 14 | 1 | 366 | 1 | 371 | 1.23e-51 | 179 |
| MS.gene045288.t1 | AT1G27360 | 38.402 | 388 | 200 | 14 | 1 | 366 | 1 | 371 | 1.23e-51 | 179 |
| MS.gene045288.t1 | AT2G42200 | 38.996 | 259 | 122 | 10 | 120 | 371 | 32 | 261 | 1.21e-35 | 135 |
| MS.gene045288.t1 | AT1G69170 | 66.304 | 92 | 31 | 0 | 148 | 239 | 107 | 198 | 1.82e-35 | 136 |
| MS.gene045288.t1 | AT3G57920 | 53.279 | 122 | 44 | 3 | 120 | 241 | 27 | 135 | 3.49e-34 | 131 |
| MS.gene045288.t1 | AT1G02065 | 53.279 | 122 | 49 | 2 | 118 | 238 | 147 | 261 | 7.04e-33 | 127 |
| MS.gene045288.t1 | AT5G50670 | 60.976 | 82 | 32 | 0 | 163 | 244 | 99 | 180 | 1.77e-31 | 124 |
| MS.gene045288.t1 | AT5G50670 | 60.976 | 82 | 32 | 0 | 163 | 244 | 99 | 180 | 1.77e-31 | 124 |
| MS.gene045288.t1 | AT5G50570 | 60.976 | 82 | 32 | 0 | 163 | 244 | 99 | 180 | 1.77e-31 | 124 |
| MS.gene045288.t1 | AT5G50570 | 60.976 | 82 | 32 | 0 | 163 | 244 | 99 | 180 | 1.77e-31 | 124 |
| MS.gene045288.t1 | AT2G33810 | 59.091 | 88 | 33 | 1 | 151 | 238 | 43 | 127 | 1.02e-30 | 115 |
| MS.gene045288.t1 | AT1G76580 | 60.674 | 89 | 35 | 0 | 163 | 251 | 112 | 200 | 2.60e-30 | 124 |
| MS.gene045288.t1 | AT1G76580 | 60.674 | 89 | 35 | 0 | 163 | 251 | 112 | 200 | 2.91e-30 | 124 |
| MS.gene045288.t1 | AT1G76580 | 60.674 | 89 | 35 | 0 | 163 | 251 | 112 | 200 | 5.14e-30 | 124 |
| MS.gene045288.t1 | AT3G60030 | 61.250 | 80 | 31 | 0 | 165 | 244 | 127 | 206 | 3.51e-29 | 121 |
| MS.gene045288.t1 | AT1G53160 | 59.494 | 79 | 32 | 0 | 165 | 243 | 54 | 132 | 1.21e-28 | 111 |
| MS.gene045288.t1 | AT2G47070 | 60.215 | 93 | 36 | 1 | 165 | 256 | 106 | 198 | 1.38e-28 | 119 |
| MS.gene045288.t1 | AT1G53160 | 45.385 | 130 | 56 | 4 | 165 | 288 | 54 | 174 | 1.54e-28 | 111 |
| MS.gene045288.t1 | AT1G53160 | 45.385 | 130 | 56 | 4 | 165 | 288 | 54 | 174 | 1.54e-28 | 111 |
| MS.gene045288.t1 | AT1G20980 | 60.000 | 95 | 37 | 1 | 151 | 244 | 106 | 200 | 3.93e-28 | 118 |
| MS.gene045288.t1 | AT3G15270 | 60.811 | 74 | 29 | 0 | 165 | 238 | 63 | 136 | 5.35e-28 | 109 |
| MS.gene045288.t1 | AT1G02065 | 46.875 | 96 | 43 | 2 | 118 | 212 | 147 | 235 | 5.90e-19 | 86.3 |
| MS.gene045288.t1 | AT5G18830 | 51.316 | 76 | 36 | 1 | 165 | 239 | 138 | 213 | 5.04e-18 | 87.4 |
| MS.gene045288.t1 | AT5G18830 | 51.316 | 76 | 36 | 1 | 165 | 239 | 138 | 213 | 5.65e-18 | 87.4 |
| MS.gene045288.t1 | AT5G18830 | 51.316 | 76 | 36 | 1 | 165 | 239 | 138 | 213 | 6.10e-18 | 87.0 |
| MS.gene045288.t1 | AT2G47070 | 60.294 | 68 | 26 | 1 | 190 | 256 | 2 | 69 | 2.36e-16 | 82.0 |
Find 117 sgRNAs with CRISPR-Local
Find 166 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGGATCAGACAAGGTATT+TGG | 0.193506 | 3.4:-79532164 | None:intergenic |
| GCTAAATTTGAAGTATTCTT+TGG | 0.209568 | 3.4:-79531791 | None:intergenic |
| TGCAGAGGAAGAGGCTTTCT+TGG | 0.222637 | 3.4:-79530828 | None:intergenic |
| AGCTTGCTGTTGGGCATGTC+TGG | 0.241731 | 3.4:-79531818 | None:intergenic |
| GGATTCAATTTCACTGCTTC+AGG | 0.274502 | 3.4:-79531250 | None:intergenic |
| GAGCATAAAATCTTTGGTTT+GGG | 0.292731 | 3.4:-79531843 | None:intergenic |
| TTTAGACGATTCTTTCTTAC+CGG | 0.323854 | 3.4:-79530708 | None:intergenic |
| TGAGCATAAAATCTTTGGTT+TGG | 0.329729 | 3.4:-79531844 | None:intergenic |
| TTAACATCTTGTGTAGCATT+TGG | 0.347549 | 3.4:-79532182 | None:intergenic |
| GCAAGGGAAACTTGACTCAT+AGG | 0.354069 | 3.4:-79532444 | None:intergenic |
| AATCTTGGTTCCTTTGCCTT+TGG | 0.356006 | 3.4:-79531933 | None:intergenic |
| TTGTGGCCTCGACCTCTCTT+TGG | 0.373974 | 3.4:+79530925 | MS.gene045288:CDS |
| CTCTTCTGTCAACCAATTCA+TGG | 0.377885 | 3.4:+79532216 | MS.gene045288:CDS |
| TACTACCACCACAGGCGATT+TGG | 0.381836 | 3.4:-79530990 | None:intergenic |
| TTCTTACCGGTGGAATTGTC+TGG | 0.385894 | 3.4:-79530695 | None:intergenic |
| ACATGCACCTGCTACATTGC+TGG | 0.389565 | 3.4:-79531036 | None:intergenic |
| ATTGATAGAATACATATTAC+AGG | 0.392874 | 3.4:+79532131 | MS.gene045288:CDS |
| AATCTCCCGGGCAATGGGAC+TGG | 0.397861 | 3.4:+79530435 | MS.gene045288:CDS |
| GCTGCTGGAGAAGTTTCAAT+TGG | 0.402606 | 3.4:-79530737 | None:intergenic |
| AGCTGCCAGGTGGAAGGTTG+TGG | 0.411491 | 3.4:+79530908 | MS.gene045288:CDS |
| ATCTCCCGGGCAATGGGACT+GGG | 0.414643 | 3.4:+79530436 | MS.gene045288:CDS |
| CAGCGCCTGTATCTCGTTCT+CGG | 0.419065 | 3.4:+79532373 | MS.gene045288:CDS |
| AATTTCACTGCTTCAGGCTG+AGG | 0.421915 | 3.4:-79531244 | None:intergenic |
| ACAATCTACTGATTGGAGTA+TGG | 0.424631 | 3.4:+79530505 | MS.gene045288:CDS |
| CGTGAAATCTCCCGGGCAAT+GGG | 0.426658 | 3.4:+79530430 | MS.gene045288:CDS |
| CAATATTCCAGTGACGAAAA+AGG | 0.427818 | 3.4:-79532323 | None:intergenic |
| GTGAGCAATGGTTCTGCTGC+TGG | 0.432022 | 3.4:-79530752 | None:intergenic |
| GTATTCTTTGGAAAAGCAAA+TGG | 0.434089 | 3.4:-79531779 | None:intergenic |
| ACAACCTGGGACAGCAATCT+TGG | 0.439368 | 3.4:-79531948 | None:intergenic |
| AAGTTTCCCTTGCAACCAGC+TGG | 0.440887 | 3.4:+79532454 | MS.gene045288:CDS |
| ATACACTCCAATCGGACAAC+CGG | 0.451604 | 3.4:+79532269 | MS.gene045288:CDS |
| TACTTTGAGGATGTTAGCAC+TGG | 0.451656 | 3.4:+79530797 | MS.gene045288:CDS |
| TCTTCTGTCAACCAATTCAT+GGG | 0.452114 | 3.4:+79532217 | MS.gene045288:CDS |
| CGAGATACAGGCGCTGGAGC+TGG | 0.455430 | 3.4:-79532366 | None:intergenic |
| CATCAAACTCTGAGAGATCA+TGG | 0.461380 | 3.4:-79531165 | None:intergenic |
| CAACCTTCCACCTGGCAGCT+TGG | 0.467365 | 3.4:-79530905 | None:intergenic |
| TCGCCTGTGGTGGTAGTAGC+TGG | 0.470263 | 3.4:+79530995 | MS.gene045288:CDS |
| GTTGGGATGTTGATTCCATC+TGG | 0.471449 | 3.4:+79530548 | MS.gene045288:CDS |
| CCTTTCTTTCCGCACAAAAG+AGG | 0.471950 | 3.4:-79530854 | None:intergenic |
| ACAGGTTACAATCTACTGAT+TGG | 0.476801 | 3.4:+79530498 | MS.gene045288:CDS |
| TGGTAAAAGATTCTACTTTG+AGG | 0.477123 | 3.4:+79530784 | MS.gene045288:CDS |
| AGGGGTGCCGGTTGTCCGAT+TGG | 0.477616 | 3.4:-79532276 | None:intergenic |
| TGTGGTGGTAGTAGCTGGTT+TGG | 0.481417 | 3.4:+79531000 | MS.gene045288:CDS |
| ACGTGAAATCTCCCGGGCAA+TGG | 0.485685 | 3.4:+79530429 | MS.gene045288:CDS |
| GAAGATCGAGAAATCAATGT+TGG | 0.486543 | 3.4:+79530530 | MS.gene045288:CDS |
| AAGAGGAACTGCAGAGGAAG+AGG | 0.487764 | 3.4:-79530837 | None:intergenic |
| ATCATATGGACCCCATGAAT+TGG | 0.492799 | 3.4:-79532228 | None:intergenic |
| TTGTCCGATTGGAGTGTATG+AGG | 0.494492 | 3.4:-79532265 | None:intergenic |
| AGCATACTCATTAATCCAGC+TGG | 0.497222 | 3.4:-79532469 | None:intergenic |
| GATTGGAGTGTATGAGGGAG+GGG | 0.501793 | 3.4:-79532259 | None:intergenic |
| CTTTGCCTTTGGATATAAAG+TGG | 0.501899 | 3.4:-79531922 | None:intergenic |
| GAGTGGAACGTGAAATCTCC+CGG | 0.503280 | 3.4:+79530422 | MS.gene045288:CDS |
| CATTAATCCAGCTGGTTGCA+AGG | 0.507260 | 3.4:-79532461 | None:intergenic |
| TTGATTCCATCTGGTGGTAG+TGG | 0.508737 | 3.4:+79530557 | MS.gene045288:CDS |
| AAGATCGAGAAATCAATGTT+GGG | 0.508795 | 3.4:+79530531 | MS.gene045288:CDS |
| CACAAATTCTATGTTTCCGA+TGG | 0.510237 | 3.4:-79530958 | None:intergenic |
| CAAGGGAAACTTGACTCATA+GGG | 0.517421 | 3.4:-79532443 | None:intergenic |
| CATGCTAAATCCAAGCTGCC+AGG | 0.528294 | 3.4:+79530895 | MS.gene045288:CDS |
| GTAACCCGAGAACGAGATAC+AGG | 0.528459 | 3.4:-79532378 | None:intergenic |
| CGATTGGAGTGTATGAGGGA+GGG | 0.531040 | 3.4:-79532260 | None:intergenic |
| TGCAGATGGGAGGCAGACAA+TGG | 0.534432 | 3.4:+79531754 | MS.gene045288:intron |
| CCTCCCTCATACACTCCAAT+CGG | 0.535964 | 3.4:+79532261 | MS.gene045288:CDS |
| TATTCTTTGGAAAAGCAAAT+GGG | 0.538218 | 3.4:-79531778 | None:intergenic |
| AGCGCCTGTATCTCGTTCTC+GGG | 0.540985 | 3.4:+79532374 | MS.gene045288:CDS |
| ACATCAATGTTAACTCAAGA+AGG | 0.548574 | 3.4:+79530668 | MS.gene045288:CDS |
| GGAACCAAGATTGCTGTCCC+AGG | 0.548599 | 3.4:+79531944 | MS.gene045288:CDS |
| GCAGATGGGAGGCAGACAAT+GGG | 0.549297 | 3.4:+79531755 | MS.gene045288:intron |
| CAAAAGCAGCAGAAACTCAC+AGG | 0.550624 | 3.4:+79530480 | MS.gene045288:CDS |
| GGTAAGAAAGAATCGTCTAA+AGG | 0.551763 | 3.4:+79530710 | MS.gene045288:CDS |
| TTGGCACACTGATCAACATC+AGG | 0.552387 | 3.4:+79532343 | MS.gene045288:CDS |
| TTTGGATATAAAGTGGCCAC+TGG | 0.552682 | 3.4:-79531915 | None:intergenic |
| AGTTGCATACTGAGGGGTGC+CGG | 0.554723 | 3.4:-79532288 | None:intergenic |
| CCAAGCTTTAGTGTGAGCAA+TGG | 0.557830 | 3.4:-79530764 | None:intergenic |
| GGGGACGAAGAGAGAGCTGA+TGG | 0.559258 | 3.4:-79531271 | None:intergenic |
| ATTGGAGTGTATGAGGGAGG+GGG | 0.561383 | 3.4:-79532258 | None:intergenic |
| AGAATACTTCAAATTTAGCA+TGG | 0.561391 | 3.4:+79531795 | MS.gene045288:CDS |
| GAATAATTCATCATCAAATG+AGG | 0.562543 | 3.4:+79530637 | MS.gene045288:CDS |
| ATTAATCCAGCTGGTTGCAA+GGG | 0.568989 | 3.4:-79532460 | None:intergenic |
| CGCTGAGCAGTTGCATACTG+AGG | 0.570454 | 3.4:-79532296 | None:intergenic |
| AATCCAAGCTGCCAGGTGGA+AGG | 0.571632 | 3.4:+79530902 | MS.gene045288:CDS |
| CTTTAGCCAAAGAGAGGTCG+AGG | 0.573405 | 3.4:-79530931 | None:intergenic |
| CGAGGCCACAACCTTCCACC+TGG | 0.580184 | 3.4:-79530913 | None:intergenic |
| CTTGAGATTTATACCATAGG+GGG | 0.580458 | 3.4:-79531290 | None:intergenic |
| AGACGATTCTTTCTTACCGG+TGG | 0.582162 | 3.4:-79530705 | None:intergenic |
| AGTGGCCACTTTATATCCAA+AGG | 0.587042 | 3.4:+79531917 | MS.gene045288:CDS |
| CCATTGCTCACACTAAAGCT+TGG | 0.588106 | 3.4:+79530764 | MS.gene045288:CDS |
| CTTTGGCTAAAGATTACCAT+CGG | 0.588534 | 3.4:+79530942 | MS.gene045288:CDS |
| TGTCCGATTGGAGTGTATGA+GGG | 0.588850 | 3.4:-79532264 | None:intergenic |
| GTCTTTCAGATCACAATGCA+AGG | 0.591028 | 3.4:+79531212 | MS.gene045288:CDS |
| GCATAAAATCTTTGGTTTGG+GGG | 0.594228 | 3.4:-79531841 | None:intergenic |
| GCTGAGCAGTTGCATACTGA+GGG | 0.602329 | 3.4:-79532295 | None:intergenic |
| TTGACAGAAGAGAGAGAGCA+CGG | 0.603893 | 3.4:-79532205 | None:intergenic |
| AGCATAAAATCTTTGGTTTG+GGG | 0.604215 | 3.4:-79531842 | None:intergenic |
| CCGATTGGAGTGTATGAGGG+AGG | 0.604444 | 3.4:-79532261 | None:intergenic |
| CACTTTATATCCAAAGGCAA+AGG | 0.613225 | 3.4:+79531923 | MS.gene045288:CDS |
| CGAGAACGAGATACAGGCGC+TGG | 0.614056 | 3.4:-79532372 | None:intergenic |
| AAACCAGCTACTACCACCAC+AGG | 0.617364 | 3.4:-79530998 | None:intergenic |
| TTGCATTGTGATCTGAAAGA+CGG | 0.621589 | 3.4:-79531210 | None:intergenic |
| TGTGAGGACTTGTCATGGAG+TGG | 0.623994 | 3.4:+79530405 | None:intergenic |
| GAATAGCCACTACCACCAGA+TGG | 0.631021 | 3.4:-79530563 | None:intergenic |
| TCATTCCAAATCGCCTGTGG+TGG | 0.632811 | 3.4:+79530985 | MS.gene045288:CDS |
| CTTCTGTCAACCAATTCATG+GGG | 0.634971 | 3.4:+79532218 | MS.gene045288:CDS |
| AGTGGAACGTGAAATCTCCC+GGG | 0.641060 | 3.4:+79530423 | MS.gene045288:CDS |
| ATCTACTGATTGGAGTATGG+AGG | 0.643141 | 3.4:+79530508 | MS.gene045288:CDS |
| TTGGAGTGTATGAGGGAGGG+GGG | 0.645515 | 3.4:-79532257 | None:intergenic |
| GGGATGTTGATTCCATCTGG+TGG | 0.647072 | 3.4:+79530551 | MS.gene045288:CDS |
| CAGTCATTCCAAATCGCCTG+TGG | 0.648152 | 3.4:+79530982 | MS.gene045288:CDS |
| TGTAGCATTTGGATCAGACA+AGG | 0.648361 | 3.4:-79532171 | None:intergenic |
| ATATTCATTCTGCAGATGGG+AGG | 0.649420 | 3.4:+79531744 | MS.gene045288:intron |
| GGTTCTCCAGACAATTCCAC+CGG | 0.652614 | 3.4:+79530689 | MS.gene045288:CDS |
| TCTTGAGATTTATACCATAG+GGG | 0.653113 | 3.4:-79531291 | None:intergenic |
| GGTAATCTTTAGCCAAAGAG+AGG | 0.662641 | 3.4:-79530937 | None:intergenic |
| CTGAGCAGTTGCATACTGAG+GGG | 0.662729 | 3.4:-79532294 | None:intergenic |
| GCTAAATCCAAGCTGCCAGG+TGG | 0.663879 | 3.4:+79530898 | MS.gene045288:CDS |
| ATGCTATCTGATGATTCCAG+TGG | 0.666446 | 3.4:+79531899 | MS.gene045288:CDS |
| TAATGCATGCTTCATCCTCG+AGG | 0.674783 | 3.4:+79530597 | MS.gene045288:CDS |
| GCACAAAAGAGGAACTGCAG+AGG | 0.694164 | 3.4:-79530843 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACACTTAATATTTTCTTATA+AGG | - | chr3.4:79531632-79531651 | None:intergenic | 15.0% |
| !!! | ATTAAATTTAGTTTGTTCAA+TGG | + | chr3.4:79532012-79532031 | MS.gene045288:intron | 15.0% |
| !!! | TTGGTTTGTTTAAAATAAAT+TGG | + | chr3.4:79531106-79531125 | MS.gene045288:intron | 15.0% |
| !! | ATTGATAGAATACATATTAC+AGG | + | chr3.4:79532131-79532150 | MS.gene045288:CDS | 20.0% |
| !! | TTATGAGAGAATTATAAGAA+TGG | + | chr3.4:79531412-79531431 | MS.gene045288:intron | 20.0% |
| !! | TTTAATAAGAAATCATGACT+CGG | - | chr3.4:79531998-79532017 | None:intergenic | 20.0% |
| !!! | AACTTAAACTATGATTTTGA+AGG | + | chr3.4:79531140-79531159 | MS.gene045288:intron | 20.0% |
| !!! | ATACTCTATGACTATATTTT+TGG | - | chr3.4:79531559-79531578 | None:intergenic | 20.0% |
| !!! | TACTCTATGACTATATTTTT+GGG | - | chr3.4:79531558-79531577 | None:intergenic | 20.0% |
| !!! | TTAGAATTTCTTTTGAGAAA+TGG | - | chr3.4:79531452-79531471 | None:intergenic | 20.0% |
| ! | AGAATACTTCAAATTTAGCA+TGG | + | chr3.4:79531795-79531814 | MS.gene045288:CDS | 25.0% |
| ! | ATTCTTGAGATTTATACCAT+AGG | - | chr3.4:79531296-79531315 | None:intergenic | 25.0% |
| ! | GAATAATTCATCATCAAATG+AGG | + | chr3.4:79530637-79530656 | MS.gene045288:CDS | 25.0% |
| ! | TTAATATTCATTCTGCAGAT+GGG | + | chr3.4:79531741-79531760 | MS.gene045288:intron | 25.0% |
| ! | TTCAGTTTCTTTGTAAGAAA+TGG | + | chr3.4:79531578-79531597 | MS.gene045288:intron | 25.0% |
| ! | TTCTTGAGATTTATACCATA+GGG | - | chr3.4:79531295-79531314 | None:intergenic | 25.0% |
| ! | TTTAAACAAACCAAAAAGAC+AGG | - | chr3.4:79531100-79531119 | None:intergenic | 25.0% |
| ! | TTTAATATTCATTCTGCAGA+TGG | + | chr3.4:79531740-79531759 | MS.gene045288:intron | 25.0% |
| !! | GCTAAATTTGAAGTATTCTT+TGG | - | chr3.4:79531794-79531813 | None:intergenic | 25.0% |
| !! | TATTCTTTGGAAAAGCAAAT+GGG | - | chr3.4:79531781-79531800 | None:intergenic | 25.0% |
| !!! | AGTTTTGAGCATAAAATCTT+TGG | - | chr3.4:79531852-79531871 | None:intergenic | 25.0% |
| !!! | TAACAGTTGTTTCTACAAAT+AGG | - | chr3.4:79532106-79532125 | None:intergenic | 25.0% |
| AAGATCGAGAAATCAATGTT+GGG | + | chr3.4:79530531-79530550 | MS.gene045288:CDS | 30.0% | |
| ACATCAATGTTAACTCAAGA+AGG | + | chr3.4:79530668-79530687 | MS.gene045288:CDS | 30.0% | |
| TAAACTAATGAAGCAAGACA+AGG | - | chr3.4:79531342-79531361 | None:intergenic | 30.0% | |
| TACAACCAATAGCATATCAA+TGG | - | chr3.4:79531478-79531497 | None:intergenic | 30.0% | |
| TCTTGAGATTTATACCATAG+GGG | - | chr3.4:79531294-79531313 | None:intergenic | 30.0% | |
| TGAAACATGCAATAAACTAG+AGG | - | chr3.4:79532064-79532083 | None:intergenic | 30.0% | |
| TGAATGGCGATATCTTAAAA+AGG | + | chr3.4:79531389-79531408 | MS.gene045288:intron | 30.0% | |
| TGAGCATAAAATCTTTGGTT+TGG | - | chr3.4:79531847-79531866 | None:intergenic | 30.0% | |
| TGGTAAAAGATTCTACTTTG+AGG | + | chr3.4:79530784-79530803 | MS.gene045288:CDS | 30.0% | |
| TTAACATCTTGTGTAGCATT+TGG | - | chr3.4:79532185-79532204 | None:intergenic | 30.0% | |
| TTAAGATTAGAGAACAACCT+GGG | - | chr3.4:79531964-79531983 | None:intergenic | 30.0% | |
| TTTAGACGATTCTTTCTTAC+CGG | - | chr3.4:79530711-79530730 | None:intergenic | 30.0% | |
| ! | AAGGCTAATTGATCTTTTAG+GGG | - | chr3.4:79531323-79531342 | None:intergenic | 30.0% |
| ! | ACAAGGCTAATTGATCTTTT+AGG | - | chr3.4:79531325-79531344 | None:intergenic | 30.0% |
| ! | ATATGCTATTGGTTGTATGA+AGG | + | chr3.4:79531481-79531500 | MS.gene045288:intron | 30.0% |
| ! | ATTGTCAATGTCATTTGCAT+TGG | - | chr3.4:79531071-79531090 | None:intergenic | 30.0% |
| ! | CAAGGCTAATTGATCTTTTA+GGG | - | chr3.4:79531324-79531343 | None:intergenic | 30.0% |
| ! | GAGCATAAAATCTTTGGTTT+GGG | - | chr3.4:79531846-79531865 | None:intergenic | 30.0% |
| ! | GTATTCTTTGGAAAAGCAAA+TGG | - | chr3.4:79531782-79531801 | None:intergenic | 30.0% |
| ! | TTTAAGATTAGAGAACAACC+TGG | - | chr3.4:79531965-79531984 | None:intergenic | 30.0% |
| !! | AGCATAAAATCTTTGGTTTG+GGG | - | chr3.4:79531845-79531864 | None:intergenic | 30.0% |
| !!! | ACAAACTTGCTGAAGTTTTT+TGG | - | chr3.4:79531875-79531894 | None:intergenic | 30.0% |
| AACCAATAGCATATCAATGG+AGG | - | chr3.4:79531475-79531494 | None:intergenic | 35.0% | |
| AACCTCCATTGATATGCTAT+TGG | + | chr3.4:79531470-79531489 | MS.gene045288:intron | 35.0% | |
| ACAGGTTACAATCTACTGAT+TGG | + | chr3.4:79530498-79530517 | MS.gene045288:CDS | 35.0% | |
| ATCCCAAACGAGAAACAAAA+TGG | - | chr3.4:79531370-79531389 | None:intergenic | 35.0% | |
| CAATATTCCAGTGACGAAAA+AGG | - | chr3.4:79532326-79532345 | None:intergenic | 35.0% | |
| CACAAATTCTATGTTTCCGA+TGG | - | chr3.4:79530961-79530980 | None:intergenic | 35.0% | |
| CACTTTATATCCAAAGGCAA+AGG | + | chr3.4:79531923-79531942 | MS.gene045288:CDS | 35.0% | |
| CTTGAGATTTATACCATAGG+GGG | - | chr3.4:79531293-79531312 | None:intergenic | 35.0% | |
| CTTTGCCTTTGGATATAAAG+TGG | - | chr3.4:79531925-79531944 | None:intergenic | 35.0% | |
| CTTTGGCTAAAGATTACCAT+CGG | + | chr3.4:79530942-79530961 | MS.gene045288:CDS | 35.0% | |
| GAAGATCGAGAAATCAATGT+TGG | + | chr3.4:79530530-79530549 | MS.gene045288:CDS | 35.0% | |
| GGTAAGAAAGAATCGTCTAA+AGG | + | chr3.4:79530710-79530729 | MS.gene045288:CDS | 35.0% | |
| TCTTCTGTCAACCAATTCAT+GGG | + | chr3.4:79532217-79532236 | MS.gene045288:CDS | 35.0% | |
| TTGCATTGTGATCTGAAAGA+CGG | - | chr3.4:79531213-79531232 | None:intergenic | 35.0% | |
| ! | AATAAGAAATCATGACTCGG+AGG | - | chr3.4:79531995-79532014 | None:intergenic | 35.0% |
| ! | ACAATCTACTGATTGGAGTA+TGG | + | chr3.4:79530505-79530524 | MS.gene045288:CDS | 35.0% |
| ! | TTTGGATCAGACAAGGTATT+TGG | - | chr3.4:79532167-79532186 | None:intergenic | 35.0% |
| !! | CAATTAGCTTCCTGTCTTTT+TGG | + | chr3.4:79531087-79531106 | MS.gene045288:intron | 35.0% |
| !! | CAGTTGTTTCTACAAATAGG+AGG | - | chr3.4:79532103-79532122 | None:intergenic | 35.0% |
| !! | CTAATTGATCTTTTAGGGGA+GGG | - | chr3.4:79531319-79531338 | None:intergenic | 35.0% |
| !! | CTTTTTCGTCACTGGAATAT+TGG | + | chr3.4:79532324-79532343 | MS.gene045288:CDS | 35.0% |
| !! | GCATAAAATCTTTGGTTTGG+GGG | - | chr3.4:79531844-79531863 | None:intergenic | 35.0% |
| !!! | TGCCATTTTGTTTCTCGTTT+GGG | + | chr3.4:79531365-79531384 | MS.gene045288:intron | 35.0% |
| !!! | TTGCCATTTTGTTTCTCGTT+TGG | + | chr3.4:79531364-79531383 | MS.gene045288:intron | 35.0% |
| AATCTTGGTTCCTTTGCCTT+TGG | - | chr3.4:79531936-79531955 | None:intergenic | 40.0% | |
| ATATTCATTCTGCAGATGGG+AGG | + | chr3.4:79531744-79531763 | MS.gene045288:intron | 40.0% | |
| ATCATATGGACCCCATGAAT+TGG | - | chr3.4:79532231-79532250 | None:intergenic | 40.0% | |
| ATGCTATCTGATGATTCCAG+TGG | + | chr3.4:79531899-79531918 | MS.gene045288:CDS | 40.0% | |
| CAAGGGAAACTTGACTCATA+GGG | - | chr3.4:79532446-79532465 | None:intergenic | 40.0% | |
| CTCTTCTGTCAACCAATTCA+TGG | + | chr3.4:79532216-79532235 | MS.gene045288:CDS | 40.0% | |
| CTTCTGTCAACCAATTCATG+GGG | + | chr3.4:79532218-79532237 | MS.gene045288:CDS | 40.0% | |
| GGATTCAATTTCACTGCTTC+AGG | - | chr3.4:79531253-79531272 | None:intergenic | 40.0% | |
| GGTAATCTTTAGCCAAAGAG+AGG | - | chr3.4:79530940-79530959 | None:intergenic | 40.0% | |
| GTCTTTCAGATCACAATGCA+AGG | + | chr3.4:79531212-79531231 | MS.gene045288:CDS | 40.0% | |
| TGTAGCATTTGGATCAGACA+AGG | - | chr3.4:79532174-79532193 | None:intergenic | 40.0% | |
| TTTGGATATAAAGTGGCCAC+TGG | - | chr3.4:79531918-79531937 | None:intergenic | 40.0% | |
| ! | AGTGGCCACTTTATATCCAA+AGG | + | chr3.4:79531917-79531936 | MS.gene045288:CDS | 40.0% |
| ! | ATCTACTGATTGGAGTATGG+AGG | + | chr3.4:79530508-79530527 | MS.gene045288:CDS | 40.0% |
| ! | CATCAAACTCTGAGAGATCA+TGG | - | chr3.4:79531168-79531187 | None:intergenic | 40.0% |
| ! | TACTTTGAGGATGTTAGCAC+TGG | + | chr3.4:79530797-79530816 | MS.gene045288:CDS | 40.0% |
| ! | TGTTTCTCGTTTGGGATGAA+TGG | + | chr3.4:79531373-79531392 | MS.gene045288:intron | 40.0% |
| !! | GCTAATTGATCTTTTAGGGG+AGG | - | chr3.4:79531320-79531339 | None:intergenic | 40.0% |
| AATTTCACTGCTTCAGGCTG+AGG | - | chr3.4:79531247-79531266 | None:intergenic | 45.0% | |
| AGACGATTCTTTCTTACCGG+TGG | - | chr3.4:79530708-79530727 | None:intergenic | 45.0% | |
| ATACACTCCAATCGGACAAC+CGG | + | chr3.4:79532269-79532288 | MS.gene045288:CDS | 45.0% | |
| CAAAAGCAGCAGAAACTCAC+AGG | + | chr3.4:79530480-79530499 | MS.gene045288:CDS | 45.0% | |
| CCATTGCTCACACTAAAGCT+TGG | + | chr3.4:79530764-79530783 | MS.gene045288:CDS | 45.0% | |
| CCTTTCTTTCCGCACAAAAG+AGG | - | chr3.4:79530857-79530876 | None:intergenic | 45.0% | |
| GCAAGGGAAACTTGACTCAT+AGG | - | chr3.4:79532447-79532466 | None:intergenic | 45.0% | |
| GCTGCTGGAGAAGTTTCAAT+TGG | - | chr3.4:79530740-79530759 | None:intergenic | 45.0% | |
| TAATGCATGCTTCATCCTCG+AGG | + | chr3.4:79530597-79530616 | MS.gene045288:CDS | 45.0% | |
| TGTCCGATTGGAGTGTATGA+GGG | - | chr3.4:79532267-79532286 | None:intergenic | 45.0% | |
| TTCTTACCGGTGGAATTGTC+TGG | - | chr3.4:79530698-79530717 | None:intergenic | 45.0% | |
| TTGACAGAAGAGAGAGAGCA+CGG | - | chr3.4:79532208-79532227 | None:intergenic | 45.0% | |
| TTGATTCCATCTGGTGGTAG+TGG | + | chr3.4:79530557-79530576 | MS.gene045288:CDS | 45.0% | |
| TTGGCACACTGATCAACATC+AGG | + | chr3.4:79532343-79532362 | MS.gene045288:CDS | 45.0% | |
| TTGTCCGATTGGAGTGTATG+AGG | - | chr3.4:79532268-79532287 | None:intergenic | 45.0% | |
| ! | CCAAGCTTTAGTGTGAGCAA+TGG | - | chr3.4:79530767-79530786 | None:intergenic | 45.0% |
| ! | CCTCTTTTGTGCGGAAAGAA+AGG | + | chr3.4:79530854-79530873 | MS.gene045288:CDS | 45.0% |
| ! | GATTTTGCCAGCAATGTAGC+AGG | + | chr3.4:79531029-79531048 | MS.gene045288:CDS | 45.0% |
| ! | TCTGCAGTTCCTCTTTTGTG+CGG | + | chr3.4:79530845-79530864 | MS.gene045288:CDS | 45.0% |
| !! | GTTGGGATGTTGATTCCATC+TGG | + | chr3.4:79530548-79530567 | MS.gene045288:CDS | 45.0% |
| AAACCAGCTACTACCACCAC+AGG | - | chr3.4:79531001-79531020 | None:intergenic | 50.0% | |
| AAGAGGAACTGCAGAGGAAG+AGG | - | chr3.4:79530840-79530859 | None:intergenic | 50.0% | |
| AAGTTTCCCTTGCAACCAGC+TGG | + | chr3.4:79532454-79532473 | MS.gene045288:CDS | 50.0% | |
| ACAACCTGGGACAGCAATCT+TGG | - | chr3.4:79531951-79531970 | None:intergenic | 50.0% | |
| ACATGCACCTGCTACATTGC+TGG | - | chr3.4:79531039-79531058 | None:intergenic | 50.0% | |
| AGTGGAACGTGAAATCTCCC+GGG | + | chr3.4:79530423-79530442 | MS.gene045288:CDS | 50.0% | |
| ATTGGAGTGTATGAGGGAGG+GGG | - | chr3.4:79532261-79532280 | None:intergenic | 50.0% | |
| CAGTCATTCCAAATCGCCTG+TGG | + | chr3.4:79530982-79531001 | MS.gene045288:CDS | 50.0% | |
| CATGCTAAATCCAAGCTGCC+AGG | + | chr3.4:79530895-79530914 | MS.gene045288:CDS | 50.0% | |
| CCTCCCTCATACACTCCAAT+CGG | + | chr3.4:79532261-79532280 | MS.gene045288:CDS | 50.0% | |
| CGATTGGAGTGTATGAGGGA+GGG | - | chr3.4:79532263-79532282 | None:intergenic | 50.0% | |
| CTGAGCAGTTGCATACTGAG+GGG | - | chr3.4:79532297-79532316 | None:intergenic | 50.0% | |
| CTTTAGCCAAAGAGAGGTCG+AGG | - | chr3.4:79530934-79530953 | None:intergenic | 50.0% | |
| GAATAGCCACTACCACCAGA+TGG | - | chr3.4:79530566-79530585 | None:intergenic | 50.0% | |
| GAGTGGAACGTGAAATCTCC+CGG | + | chr3.4:79530422-79530441 | MS.gene045288:CDS | 50.0% | |
| GATTGGAGTGTATGAGGGAG+GGG | - | chr3.4:79532262-79532281 | None:intergenic | 50.0% | |
| GCACAAAAGAGGAACTGCAG+AGG | - | chr3.4:79530846-79530865 | None:intergenic | 50.0% | |
| GCTGAGCAGTTGCATACTGA+GGG | - | chr3.4:79532298-79532317 | None:intergenic | 50.0% | |
| GGTTCTCCAGACAATTCCAC+CGG | + | chr3.4:79530689-79530708 | MS.gene045288:CDS | 50.0% | |
| GTAACCCGAGAACGAGATAC+AGG | - | chr3.4:79532381-79532400 | None:intergenic | 50.0% | |
| TACTACCACCACAGGCGATT+TGG | - | chr3.4:79530993-79531012 | None:intergenic | 50.0% | |
| TCATTCCAAATCGCCTGTGG+TGG | + | chr3.4:79530985-79531004 | MS.gene045288:CDS | 50.0% | |
| TGCAGAGGAAGAGGCTTTCT+TGG | - | chr3.4:79530831-79530850 | None:intergenic | 50.0% | |
| TGTGGTGGTAGTAGCTGGTT+TGG | + | chr3.4:79531000-79531019 | MS.gene045288:CDS | 50.0% | |
| ! | AGCAGATTTTGAGCTCCTCG+AGG | - | chr3.4:79530615-79530634 | None:intergenic | 50.0% |
| !! | GGGATGTTGATTCCATCTGG+TGG | + | chr3.4:79530551-79530570 | MS.gene045288:CDS | 50.0% |
| AATCCAAGCTGCCAGGTGGA+AGG | + | chr3.4:79530902-79530921 | MS.gene045288:CDS | 55.0% | |
| ACGTGAAATCTCCCGGGCAA+TGG | + | chr3.4:79530429-79530448 | MS.gene045288:CDS | 55.0% | |
| AGCGCCTGTATCTCGTTCTC+GGG | + | chr3.4:79532374-79532393 | MS.gene045288:CDS | 55.0% | |
| CAGCGCCTGTATCTCGTTCT+CGG | + | chr3.4:79532373-79532392 | MS.gene045288:CDS | 55.0% | |
| CCGATTGGAGTGTATGAGGG+AGG | - | chr3.4:79532264-79532283 | None:intergenic | 55.0% | |
| CGCTGAGCAGTTGCATACTG+AGG | - | chr3.4:79532299-79532318 | None:intergenic | 55.0% | |
| CGTGAAATCTCCCGGGCAAT+GGG | + | chr3.4:79530430-79530449 | MS.gene045288:CDS | 55.0% | |
| GCAGATGGGAGGCAGACAAT+GGG | + | chr3.4:79531755-79531774 | MS.gene045288:intron | 55.0% | |
| GCTAAATCCAAGCTGCCAGG+TGG | + | chr3.4:79530898-79530917 | MS.gene045288:CDS | 55.0% | |
| GGAACCAAGATTGCTGTCCC+AGG | + | chr3.4:79531944-79531963 | MS.gene045288:CDS | 55.0% | |
| TGCAGATGGGAGGCAGACAA+TGG | + | chr3.4:79531754-79531773 | MS.gene045288:intron | 55.0% | |
| TTGGAGTGTATGAGGGAGGG+GGG | - | chr3.4:79532260-79532279 | None:intergenic | 55.0% | |
| TTGTGGCCTCGACCTCTCTT+TGG | + | chr3.4:79530925-79530944 | MS.gene045288:CDS | 55.0% | |
| ! | AGTTGCATACTGAGGGGTGC+CGG | - | chr3.4:79532291-79532310 | None:intergenic | 55.0% |
| ! | GAGGGGGGCTTGGTATCATA+TGG | - | chr3.4:79532245-79532264 | None:intergenic | 55.0% |
| ! | GTGAGCAATGGTTCTGCTGC+TGG | - | chr3.4:79530755-79530774 | None:intergenic | 55.0% |
| ! | GTTTTCCCAGTCCCATTGCC+CGG | - | chr3.4:79530444-79530463 | None:intergenic | 55.0% |
| ! | TTTTCCCAGTCCCATTGCCC+GGG | - | chr3.4:79530443-79530462 | None:intergenic | 55.0% |
| !! | AGCTTGCTGTTGGGCATGTC+TGG | - | chr3.4:79531821-79531840 | None:intergenic | 55.0% |
| !! | GCGCTCACCTTTTTCGTCAC+TGG | + | chr3.4:79532316-79532335 | MS.gene045288:CDS | 55.0% |
| !! | GTTTGGGGGAGCTTGCTGTT+GGG | - | chr3.4:79531830-79531849 | None:intergenic | 55.0% |
| AATCTCCCGGGCAATGGGAC+TGG | + | chr3.4:79530435-79530454 | MS.gene045288:CDS | 60.0% | |
| AGCTGCCAGGTGGAAGGTTG+TGG | + | chr3.4:79530908-79530927 | MS.gene045288:CDS | 60.0% | |
| ATCTCCCGGGCAATGGGACT+GGG | + | chr3.4:79530436-79530455 | MS.gene045288:CDS | 60.0% | |
| CAACCTTCCACCTGGCAGCT+TGG | - | chr3.4:79530908-79530927 | None:intergenic | 60.0% | |
| CGAGAACGAGATACAGGCGC+TGG | - | chr3.4:79532375-79532394 | None:intergenic | 60.0% | |
| GCTCTCTCTTCGTCCCCCTA+TGG | + | chr3.4:79531277-79531296 | MS.gene045288:CDS | 60.0% | |
| GGGGACGAAGAGAGAGCTGA+TGG | - | chr3.4:79531274-79531293 | None:intergenic | 60.0% | |
| TCGCCTGTGGTGGTAGTAGC+TGG | + | chr3.4:79530995-79531014 | MS.gene045288:CDS | 60.0% | |
| !! | GGTTTGGGGGAGCTTGCTGT+TGG | - | chr3.4:79531831-79531850 | None:intergenic | 60.0% |
| CGAGGCCACAACCTTCCACC+TGG | - | chr3.4:79530916-79530935 | None:intergenic | 65.0% | |
| GTGTATGAGGGAGGGGGGCT+TGG | - | chr3.4:79532255-79532274 | None:intergenic | 65.0% | |
| !! | AGGGGTGCCGGTTGTCCGAT+TGG | - | chr3.4:79532279-79532298 | None:intergenic | 65.0% |
| !! | CGAGATACAGGCGCTGGAGC+TGG | - | chr3.4:79532369-79532388 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 79530419 | 79532481 | 79530419 | ID=MS.gene045288 |
| chr3.4 | mRNA | 79530419 | 79532481 | 79530419 | ID=MS.gene045288.t1;Parent=MS.gene045288 |
| chr3.4 | exon | 79530419 | 79531050 | 79530419 | ID=MS.gene045288.t1.exon1;Parent=MS.gene045288.t1 |
| chr3.4 | CDS | 79530419 | 79531050 | 79530419 | ID=cds.MS.gene045288.t1;Parent=MS.gene045288.t1 |
| chr3.4 | exon | 79531162 | 79531298 | 79531162 | ID=MS.gene045288.t1.exon2;Parent=MS.gene045288.t1 |
| chr3.4 | CDS | 79531162 | 79531298 | 79531162 | ID=cds.MS.gene045288.t1;Parent=MS.gene045288.t1 |
| chr3.4 | exon | 79531759 | 79531965 | 79531759 | ID=MS.gene045288.t1.exon3;Parent=MS.gene045288.t1 |
| chr3.4 | CDS | 79531759 | 79531965 | 79531759 | ID=cds.MS.gene045288.t1;Parent=MS.gene045288.t1 |
| chr3.4 | exon | 79532114 | 79532481 | 79532114 | ID=MS.gene045288.t1.exon4;Parent=MS.gene045288.t1 |
| chr3.4 | CDS | 79532114 | 79532481 | 79532114 | ID=cds.MS.gene045288.t1;Parent=MS.gene045288.t1 |
| Gene Sequence |
| Protein sequence |
