Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045290.t1 | XP_003601767.2 | 94 | 447 | 14 | 1 | 1 | 447 | 1 | 434 | 1.50E-225 | 792 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045290.t1 | A2YGR5 | 40.7 | 415 | 194 | 10 | 1 | 379 | 6 | 404 | 1.7e-52 | 208.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045290.t1 | G7JBG3 | 94.0 | 447 | 14 | 1 | 1 | 447 | 1 | 434 | 1.1e-225 | 792.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene045290.t1 | TF | SBP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045290.t1 | MTR_3g085180 | 93.960 | 447 | 14 | 1 | 1 | 447 | 1 | 434 | 0.0 | 860 |
| MS.gene045290.t1 | MTR_8g080670 | 51.395 | 430 | 165 | 10 | 1 | 412 | 1 | 404 | 2.52e-110 | 332 |
| MS.gene045290.t1 | MTR_8g080680 | 46.785 | 451 | 173 | 9 | 1 | 438 | 1 | 397 | 6.23e-109 | 327 |
| MS.gene045290.t1 | MTR_8g080690 | 51.225 | 408 | 157 | 11 | 1 | 398 | 1 | 376 | 7.20e-106 | 319 |
| MS.gene045290.t1 | MTR_5g046670 | 41.827 | 208 | 112 | 4 | 39 | 240 | 115 | 319 | 1.11e-39 | 149 |
| MS.gene045290.t1 | MTR_1g053715 | 37.011 | 281 | 139 | 7 | 115 | 381 | 18 | 274 | 3.27e-39 | 145 |
| MS.gene045290.t1 | MTR_7g444860 | 48.447 | 161 | 79 | 3 | 93 | 249 | 73 | 233 | 8.69e-38 | 140 |
| MS.gene045290.t1 | MTR_7g092930 | 36.207 | 290 | 125 | 8 | 120 | 387 | 17 | 268 | 1.83e-37 | 139 |
| MS.gene045290.t1 | MTR_8g463140 | 70.000 | 80 | 24 | 0 | 163 | 242 | 63 | 142 | 7.97e-36 | 130 |
| MS.gene045290.t1 | MTR_3g099080 | 49.606 | 127 | 61 | 3 | 151 | 276 | 83 | 207 | 2.83e-35 | 134 |
| MS.gene045290.t1 | MTR_4g109770 | 50.781 | 128 | 56 | 2 | 117 | 240 | 74 | 198 | 3.90e-35 | 136 |
| MS.gene045290.t1 | MTR_2g078770 | 61.798 | 89 | 34 | 0 | 150 | 238 | 43 | 131 | 1.56e-34 | 127 |
| MS.gene045290.t1 | MTR_4g088555 | 55.963 | 109 | 32 | 1 | 130 | 238 | 44 | 136 | 1.92e-34 | 125 |
| MS.gene045290.t1 | MTR_8g005960 | 48.684 | 152 | 63 | 3 | 118 | 261 | 147 | 291 | 7.31e-34 | 129 |
| MS.gene045290.t1 | MTR_7g028740 | 59.341 | 91 | 34 | 1 | 154 | 244 | 69 | 156 | 1.34e-32 | 127 |
| MS.gene045290.t1 | MTR_8g096780 | 56.311 | 103 | 42 | 2 | 164 | 266 | 98 | 197 | 2.51e-32 | 127 |
| MS.gene045290.t1 | MTR_2g014200 | 57.895 | 95 | 39 | 1 | 148 | 242 | 48 | 141 | 5.17e-32 | 119 |
| MS.gene045290.t1 | MTR_2g461920 | 60.000 | 90 | 36 | 0 | 151 | 240 | 157 | 246 | 1.12e-30 | 124 |
| MS.gene045290.t1 | MTR_1g086250 | 56.842 | 95 | 41 | 0 | 150 | 244 | 132 | 226 | 4.05e-29 | 121 |
| MS.gene045290.t1 | MTR_2g046550 | 47.934 | 121 | 55 | 2 | 134 | 247 | 102 | 221 | 2.00e-28 | 119 |
| MS.gene045290.t1 | MTR_1g035010 | 58.621 | 87 | 36 | 0 | 163 | 249 | 102 | 188 | 2.99e-28 | 118 |
| MS.gene045290.t1 | MTR_7g110320 | 61.250 | 80 | 31 | 0 | 165 | 244 | 145 | 224 | 2.16e-26 | 112 |
| MS.gene045290.t1 | MTR_7g110320 | 61.250 | 80 | 31 | 0 | 165 | 244 | 145 | 224 | 2.85e-26 | 112 |
| MS.gene045290.t1 | MTR_2g020620 | 52.239 | 67 | 32 | 0 | 172 | 238 | 97 | 163 | 2.20e-16 | 82.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045290.t1 | AT5G43270 | 39.031 | 392 | 167 | 16 | 1 | 366 | 1 | 346 | 4.57e-55 | 189 |
| MS.gene045290.t1 | AT5G43270 | 39.031 | 392 | 167 | 16 | 1 | 366 | 1 | 346 | 4.57e-55 | 189 |
| MS.gene045290.t1 | AT5G43270 | 39.031 | 392 | 167 | 16 | 1 | 366 | 1 | 346 | 4.57e-55 | 189 |
| MS.gene045290.t1 | AT1G27370 | 47.674 | 258 | 110 | 7 | 1 | 240 | 1 | 251 | 1.48e-53 | 183 |
| MS.gene045290.t1 | AT1G27370 | 47.674 | 258 | 110 | 7 | 1 | 240 | 1 | 251 | 5.46e-53 | 182 |
| MS.gene045290.t1 | AT1G27370 | 47.674 | 258 | 110 | 7 | 1 | 240 | 1 | 251 | 5.46e-53 | 182 |
| MS.gene045290.t1 | AT1G27370 | 47.674 | 258 | 110 | 7 | 1 | 240 | 1 | 251 | 5.46e-53 | 182 |
| MS.gene045290.t1 | AT1G27370 | 47.674 | 258 | 110 | 7 | 1 | 240 | 1 | 251 | 5.46e-53 | 182 |
| MS.gene045290.t1 | AT1G27370 | 47.674 | 258 | 110 | 7 | 1 | 240 | 1 | 251 | 5.46e-53 | 182 |
| MS.gene045290.t1 | AT1G27370 | 47.674 | 258 | 110 | 7 | 1 | 240 | 1 | 251 | 5.46e-53 | 182 |
| MS.gene045290.t1 | AT1G27360 | 38.402 | 388 | 200 | 14 | 1 | 366 | 1 | 371 | 2.16e-51 | 178 |
| MS.gene045290.t1 | AT1G27360 | 38.402 | 388 | 200 | 14 | 1 | 366 | 1 | 371 | 2.16e-51 | 178 |
| MS.gene045290.t1 | AT1G27360 | 38.402 | 388 | 200 | 14 | 1 | 366 | 1 | 371 | 2.16e-51 | 178 |
| MS.gene045290.t1 | AT1G27360 | 38.402 | 388 | 200 | 14 | 1 | 366 | 1 | 371 | 2.16e-51 | 178 |
| MS.gene045290.t1 | AT2G42200 | 38.996 | 259 | 122 | 10 | 120 | 371 | 32 | 261 | 1.23e-35 | 135 |
| MS.gene045290.t1 | AT1G69170 | 66.304 | 92 | 31 | 0 | 148 | 239 | 107 | 198 | 1.87e-35 | 135 |
| MS.gene045290.t1 | AT3G57920 | 53.279 | 122 | 44 | 3 | 120 | 241 | 27 | 135 | 3.71e-34 | 131 |
| MS.gene045290.t1 | AT1G02065 | 53.279 | 122 | 49 | 2 | 118 | 238 | 147 | 261 | 8.11e-33 | 127 |
| MS.gene045290.t1 | AT5G50670 | 60.976 | 82 | 32 | 0 | 163 | 244 | 99 | 180 | 1.96e-31 | 124 |
| MS.gene045290.t1 | AT5G50670 | 60.976 | 82 | 32 | 0 | 163 | 244 | 99 | 180 | 1.96e-31 | 124 |
| MS.gene045290.t1 | AT5G50570 | 60.976 | 82 | 32 | 0 | 163 | 244 | 99 | 180 | 1.96e-31 | 124 |
| MS.gene045290.t1 | AT5G50570 | 60.976 | 82 | 32 | 0 | 163 | 244 | 99 | 180 | 1.96e-31 | 124 |
| MS.gene045290.t1 | AT2G33810 | 59.091 | 88 | 33 | 1 | 151 | 238 | 43 | 127 | 1.04e-30 | 115 |
| MS.gene045290.t1 | AT1G76580 | 60.674 | 89 | 35 | 0 | 163 | 251 | 112 | 200 | 2.82e-30 | 124 |
| MS.gene045290.t1 | AT1G76580 | 60.674 | 89 | 35 | 0 | 163 | 251 | 112 | 200 | 3.11e-30 | 124 |
| MS.gene045290.t1 | AT1G76580 | 60.674 | 89 | 35 | 0 | 163 | 251 | 112 | 200 | 5.38e-30 | 124 |
| MS.gene045290.t1 | AT3G60030 | 61.250 | 80 | 31 | 0 | 165 | 244 | 127 | 206 | 3.85e-29 | 121 |
| MS.gene045290.t1 | AT1G53160 | 44.444 | 117 | 57 | 1 | 165 | 273 | 54 | 170 | 1.18e-28 | 111 |
| MS.gene045290.t1 | AT2G47070 | 60.215 | 93 | 36 | 1 | 165 | 256 | 106 | 198 | 1.46e-28 | 119 |
| MS.gene045290.t1 | AT1G53160 | 45.385 | 130 | 56 | 4 | 165 | 288 | 54 | 174 | 1.64e-28 | 110 |
| MS.gene045290.t1 | AT1G53160 | 45.385 | 130 | 56 | 4 | 165 | 288 | 54 | 174 | 1.64e-28 | 110 |
| MS.gene045290.t1 | AT1G20980 | 60.000 | 95 | 37 | 1 | 151 | 244 | 106 | 200 | 4.00e-28 | 118 |
| MS.gene045290.t1 | AT3G15270 | 60.811 | 74 | 29 | 0 | 165 | 238 | 63 | 136 | 5.40e-28 | 109 |
| MS.gene045290.t1 | AT1G02065 | 46.875 | 96 | 43 | 2 | 118 | 212 | 147 | 235 | 6.95e-19 | 86.3 |
| MS.gene045290.t1 | AT5G18830 | 51.316 | 76 | 36 | 1 | 165 | 239 | 138 | 213 | 5.77e-18 | 87.0 |
| MS.gene045290.t1 | AT5G18830 | 51.316 | 76 | 36 | 1 | 165 | 239 | 138 | 213 | 6.27e-18 | 87.0 |
| MS.gene045290.t1 | AT5G18830 | 51.316 | 76 | 36 | 1 | 165 | 239 | 138 | 213 | 6.46e-18 | 87.0 |
| MS.gene045290.t1 | AT2G47070 | 60.294 | 68 | 26 | 1 | 190 | 256 | 2 | 69 | 2.42e-16 | 82.0 |
Find 117 sgRNAs with CRISPR-Local
Find 166 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGGATCAGACAAGGTATT+TGG | 0.193506 | 3.4:-79519199 | None:intergenic |
| GCTAAATTTGAAGTATTCTT+TGG | 0.209568 | 3.4:-79518826 | None:intergenic |
| TGCAGAGGAAGAGGCTTTCT+TGG | 0.222637 | 3.4:-79517863 | None:intergenic |
| AGCTTGCTGTTGGGCATGTC+TGG | 0.241731 | 3.4:-79518853 | None:intergenic |
| GGATTCAATTTCACTGCTTC+AGG | 0.274502 | 3.4:-79518285 | None:intergenic |
| GAGCATAAAATCTTTGGTTT+GGG | 0.292731 | 3.4:-79518878 | None:intergenic |
| TTTAGACGATTCTTTCTTAC+CGG | 0.323854 | 3.4:-79517743 | None:intergenic |
| TGAGCATAAAATCTTTGGTT+TGG | 0.329729 | 3.4:-79518879 | None:intergenic |
| AATCTTGGTTCCTTTGCCTT+TGG | 0.339628 | 3.4:-79518968 | None:intergenic |
| TTAACATCTTGTGTAGCATT+TGG | 0.347549 | 3.4:-79519217 | None:intergenic |
| GCAAGGGAAACTTGACTCAT+AGG | 0.354069 | 3.4:-79519479 | None:intergenic |
| TTGTGGCCTCGACCTCTCTT+TGG | 0.373974 | 3.4:+79517960 | MS.gene045290:CDS |
| CTCTTCTGTCAACCAATTCA+TGG | 0.377885 | 3.4:+79519251 | MS.gene045290:CDS |
| TACTACCACCACAGGCGATT+TGG | 0.381836 | 3.4:-79518025 | None:intergenic |
| TTCTTACCGGTGGAATTGTC+TGG | 0.385894 | 3.4:-79517730 | None:intergenic |
| ACATGCACCTGCTACATTGC+TGG | 0.389565 | 3.4:-79518071 | None:intergenic |
| ATTGATAGAATACATATTAC+AGG | 0.392874 | 3.4:+79519166 | MS.gene045290:CDS |
| AATCTCCCGGGCAATGGGAC+TGG | 0.397861 | 3.4:+79517470 | MS.gene045290:CDS |
| GCTGCTGGAGAAGTTTCAAT+TGG | 0.402606 | 3.4:-79517772 | None:intergenic |
| AGCTGCCAGGTGGAAGGTTG+TGG | 0.411491 | 3.4:+79517943 | MS.gene045290:CDS |
| ATCTCCCGGGCAATGGGACT+GGG | 0.414643 | 3.4:+79517471 | MS.gene045290:CDS |
| CAGCGCCTGTATCTCGTTCT+CGG | 0.419065 | 3.4:+79519408 | MS.gene045290:CDS |
| AATTTCACTGCTTCAGGCTG+AGG | 0.421915 | 3.4:-79518279 | None:intergenic |
| ACAATCTACTGATTGGAGTA+TGG | 0.424631 | 3.4:+79517540 | MS.gene045290:CDS |
| CGTGAAATCTCCCGGGCAAT+GGG | 0.426658 | 3.4:+79517465 | MS.gene045290:CDS |
| CAATATTCCAGTGACGAAAA+AGG | 0.427818 | 3.4:-79519358 | None:intergenic |
| GTGAGCAATGGTTCTGCTGC+TGG | 0.432022 | 3.4:-79517787 | None:intergenic |
| GTATTCTTTGGAAAAGCAAA+TGG | 0.434089 | 3.4:-79518814 | None:intergenic |
| ACAACCTGGGACAGCAATCT+TGG | 0.439368 | 3.4:-79518983 | None:intergenic |
| AAGTTTCCCTTGCAACCAGC+TGG | 0.440887 | 3.4:+79519489 | MS.gene045290:CDS |
| ATACACTCCAATCGGACAAC+CGG | 0.451604 | 3.4:+79519304 | MS.gene045290:CDS |
| TACTTTGAGGATGTTAGCAC+TGG | 0.451656 | 3.4:+79517832 | MS.gene045290:CDS |
| TCTTCTGTCAACCAATTCAT+GGG | 0.452114 | 3.4:+79519252 | MS.gene045290:CDS |
| CGAGATACAGGCGCTGGAGC+TGG | 0.455430 | 3.4:-79519401 | None:intergenic |
| CATCAAACTCTGAGAGATCA+TGG | 0.461380 | 3.4:-79518200 | None:intergenic |
| CAACCTTCCACCTGGCAGCT+TGG | 0.467365 | 3.4:-79517940 | None:intergenic |
| TCGCCTGTGGTGGTAGTAGC+TGG | 0.470263 | 3.4:+79518030 | MS.gene045290:CDS |
| GTTGGGATGTTGATTCCATC+TGG | 0.471449 | 3.4:+79517583 | MS.gene045290:CDS |
| CCTTTCTTTCCGCACAAAAG+AGG | 0.471950 | 3.4:-79517889 | None:intergenic |
| ACAGGTTACAATCTACTGAT+TGG | 0.476801 | 3.4:+79517533 | MS.gene045290:CDS |
| TGGTAAAAGATTCTACTTTG+AGG | 0.477123 | 3.4:+79517819 | MS.gene045290:CDS |
| AGGGGTGCCGGTTGTCCGAT+TGG | 0.477616 | 3.4:-79519311 | None:intergenic |
| TGTGGTGGTAGTAGCTGGTT+TGG | 0.481417 | 3.4:+79518035 | MS.gene045290:CDS |
| ACGTGAAATCTCCCGGGCAA+TGG | 0.485685 | 3.4:+79517464 | MS.gene045290:CDS |
| GAAGATCGAGAAATCAATGT+TGG | 0.486543 | 3.4:+79517565 | MS.gene045290:CDS |
| AAGAGGAACTGCAGAGGAAG+AGG | 0.487764 | 3.4:-79517872 | None:intergenic |
| ATCATATGGACCCCATGAAT+TGG | 0.492799 | 3.4:-79519263 | None:intergenic |
| CTTTGCCTTTGGATCTAAAG+TGG | 0.493198 | 3.4:-79518957 | None:intergenic |
| TTGTCCGATTGGAGTGTATG+AGG | 0.494492 | 3.4:-79519300 | None:intergenic |
| AGCATACTCATTAATCCAGC+TGG | 0.497222 | 3.4:-79519504 | None:intergenic |
| GATTGGAGTGTATGAGGGAG+GGG | 0.501793 | 3.4:-79519294 | None:intergenic |
| GAGTGGAACGTGAAATCTCC+CGG | 0.503280 | 3.4:+79517457 | MS.gene045290:CDS |
| CATTAATCCAGCTGGTTGCA+AGG | 0.507260 | 3.4:-79519496 | None:intergenic |
| TTGATTCCATCTGGTGGTAG+TGG | 0.508737 | 3.4:+79517592 | MS.gene045290:CDS |
| AAGATCGAGAAATCAATGTT+GGG | 0.508795 | 3.4:+79517566 | MS.gene045290:CDS |
| CACAAATTCTATGTTTCCGA+TGG | 0.510237 | 3.4:-79517993 | None:intergenic |
| CAAGGGAAACTTGACTCATA+GGG | 0.517421 | 3.4:-79519478 | None:intergenic |
| CATGCTAAATCCAAGCTGCC+AGG | 0.528294 | 3.4:+79517930 | MS.gene045290:CDS |
| GTAACCCGAGAACGAGATAC+AGG | 0.528459 | 3.4:-79519413 | None:intergenic |
| CGATTGGAGTGTATGAGGGA+GGG | 0.531040 | 3.4:-79519295 | None:intergenic |
| TGCAGATGGGAGGCAGACAA+TGG | 0.534432 | 3.4:+79518789 | MS.gene045290:intron |
| CCTCCCTCATACACTCCAAT+CGG | 0.535964 | 3.4:+79519296 | MS.gene045290:CDS |
| TATTCTTTGGAAAAGCAAAT+GGG | 0.538218 | 3.4:-79518813 | None:intergenic |
| AGCGCCTGTATCTCGTTCTC+GGG | 0.540985 | 3.4:+79519409 | MS.gene045290:CDS |
| ACATCAATGTTAACTCAAGA+AGG | 0.548574 | 3.4:+79517703 | MS.gene045290:CDS |
| GGAACCAAGATTGCTGTCCC+AGG | 0.548599 | 3.4:+79518979 | MS.gene045290:CDS |
| GCAGATGGGAGGCAGACAAT+GGG | 0.549297 | 3.4:+79518790 | MS.gene045290:intron |
| CAAAAGCAGCAGAAACTCAC+AGG | 0.550624 | 3.4:+79517515 | MS.gene045290:CDS |
| GGTAAGAAAGAATCGTCTAA+AGG | 0.551763 | 3.4:+79517745 | MS.gene045290:CDS |
| TTGGCACACTGATCAACATC+AGG | 0.552387 | 3.4:+79519378 | MS.gene045290:CDS |
| AGTTGCATACTGAGGGGTGC+CGG | 0.554723 | 3.4:-79519323 | None:intergenic |
| CCAAGCTTTAGTGTGAGCAA+TGG | 0.557830 | 3.4:-79517799 | None:intergenic |
| GGGGACGAAGAGAGAGCTGA+TGG | 0.559258 | 3.4:-79518306 | None:intergenic |
| ATTGGAGTGTATGAGGGAGG+GGG | 0.561383 | 3.4:-79519293 | None:intergenic |
| AGAATACTTCAAATTTAGCA+TGG | 0.561391 | 3.4:+79518830 | MS.gene045290:CDS |
| GAATAATTCATCATCAAATG+AGG | 0.562543 | 3.4:+79517672 | MS.gene045290:CDS |
| TTTGGATCTAAAGTGGCCAC+TGG | 0.566344 | 3.4:-79518950 | None:intergenic |
| ATTAATCCAGCTGGTTGCAA+GGG | 0.568989 | 3.4:-79519495 | None:intergenic |
| CGCTGAGCAGTTGCATACTG+AGG | 0.570454 | 3.4:-79519331 | None:intergenic |
| CACTTTAGATCCAAAGGCAA+AGG | 0.570672 | 3.4:+79518958 | MS.gene045290:CDS |
| AATCCAAGCTGCCAGGTGGA+AGG | 0.571632 | 3.4:+79517937 | MS.gene045290:CDS |
| CTTTAGCCAAAGAGAGGTCG+AGG | 0.573405 | 3.4:-79517966 | None:intergenic |
| CGAGGCCACAACCTTCCACC+TGG | 0.580184 | 3.4:-79517948 | None:intergenic |
| CTTGAGATTTATACCATAGG+GGG | 0.580458 | 3.4:-79518325 | None:intergenic |
| AGACGATTCTTTCTTACCGG+TGG | 0.582162 | 3.4:-79517740 | None:intergenic |
| AGTGGCCACTTTAGATCCAA+AGG | 0.583091 | 3.4:+79518952 | MS.gene045290:CDS |
| CCATTGCTCACACTAAAGCT+TGG | 0.588106 | 3.4:+79517799 | MS.gene045290:CDS |
| CTTTGGCTAAAGATTACCAT+CGG | 0.588534 | 3.4:+79517977 | MS.gene045290:CDS |
| TGTCCGATTGGAGTGTATGA+GGG | 0.588850 | 3.4:-79519299 | None:intergenic |
| GTCTTTCAGATCACAATGCA+AGG | 0.591028 | 3.4:+79518247 | MS.gene045290:CDS |
| GCATAAAATCTTTGGTTTGG+GGG | 0.594228 | 3.4:-79518876 | None:intergenic |
| GCTGAGCAGTTGCATACTGA+GGG | 0.602329 | 3.4:-79519330 | None:intergenic |
| TTGACAGAAGAGAGAGAGCA+CGG | 0.603893 | 3.4:-79519240 | None:intergenic |
| AGCATAAAATCTTTGGTTTG+GGG | 0.604215 | 3.4:-79518877 | None:intergenic |
| CCGATTGGAGTGTATGAGGG+AGG | 0.604444 | 3.4:-79519296 | None:intergenic |
| CGAGAACGAGATACAGGCGC+TGG | 0.614056 | 3.4:-79519407 | None:intergenic |
| AAACCAGCTACTACCACCAC+AGG | 0.617364 | 3.4:-79518033 | None:intergenic |
| TTGCATTGTGATCTGAAAGA+CGG | 0.621589 | 3.4:-79518245 | None:intergenic |
| TGTGAGGACTTGTCATGGAG+TGG | 0.623994 | 3.4:+79517440 | None:intergenic |
| GAATAGCCACTACCACCAGA+TGG | 0.631021 | 3.4:-79517598 | None:intergenic |
| TCATTCCAAATCGCCTGTGG+TGG | 0.632811 | 3.4:+79518020 | MS.gene045290:CDS |
| CTTCTGTCAACCAATTCATG+GGG | 0.634971 | 3.4:+79519253 | MS.gene045290:CDS |
| AGTGGAACGTGAAATCTCCC+GGG | 0.641060 | 3.4:+79517458 | MS.gene045290:CDS |
| ATCTACTGATTGGAGTATGG+AGG | 0.643141 | 3.4:+79517543 | MS.gene045290:CDS |
| TTGGAGTGTATGAGGGAGGG+GGG | 0.645515 | 3.4:-79519292 | None:intergenic |
| GGGATGTTGATTCCATCTGG+TGG | 0.647072 | 3.4:+79517586 | MS.gene045290:CDS |
| CAGTCATTCCAAATCGCCTG+TGG | 0.648152 | 3.4:+79518017 | MS.gene045290:CDS |
| TGTAGCATTTGGATCAGACA+AGG | 0.648361 | 3.4:-79519206 | None:intergenic |
| ATATTCATTCTGCAGATGGG+AGG | 0.649420 | 3.4:+79518779 | MS.gene045290:intron |
| GGTTCTCCAGACAATTCCAC+CGG | 0.652614 | 3.4:+79517724 | MS.gene045290:CDS |
| TCTTGAGATTTATACCATAG+GGG | 0.653113 | 3.4:-79518326 | None:intergenic |
| GGTAATCTTTAGCCAAAGAG+AGG | 0.662641 | 3.4:-79517972 | None:intergenic |
| CTGAGCAGTTGCATACTGAG+GGG | 0.662729 | 3.4:-79519329 | None:intergenic |
| GCTAAATCCAAGCTGCCAGG+TGG | 0.663879 | 3.4:+79517933 | MS.gene045290:CDS |
| ATGCTATCTGATGATTCCAG+TGG | 0.666446 | 3.4:+79518934 | MS.gene045290:CDS |
| TAATGCATGCTTCATCCTCG+AGG | 0.674783 | 3.4:+79517632 | MS.gene045290:CDS |
| GCACAAAAGAGGAACTGCAG+AGG | 0.694164 | 3.4:-79517878 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACACTTAATATTTTCTTATA+AGG | - | chr3.4:79518667-79518686 | None:intergenic | 15.0% |
| !!! | ATTAAATTTAGTTTGTTCAA+TGG | + | chr3.4:79519047-79519066 | MS.gene045290:intron | 15.0% |
| !!! | TTGGTTTGTTTAAAATAAAT+TGG | + | chr3.4:79518141-79518160 | MS.gene045290:intron | 15.0% |
| !! | ATTGATAGAATACATATTAC+AGG | + | chr3.4:79519166-79519185 | MS.gene045290:CDS | 20.0% |
| !! | TTATGAGAGAATTATAAGAA+TGG | + | chr3.4:79518447-79518466 | MS.gene045290:intron | 20.0% |
| !! | TTTAATAAGAAATCATGACT+CGG | - | chr3.4:79519033-79519052 | None:intergenic | 20.0% |
| !!! | AACTTAAACTATGATTTTGA+AGG | + | chr3.4:79518175-79518194 | MS.gene045290:intron | 20.0% |
| !!! | ATACTCTATGACTATATTTT+TGG | - | chr3.4:79518594-79518613 | None:intergenic | 20.0% |
| !!! | TACTCTATGACTATATTTTT+GGG | - | chr3.4:79518593-79518612 | None:intergenic | 20.0% |
| !!! | TTAGAATTTCTTTTGAGAAA+TGG | - | chr3.4:79518487-79518506 | None:intergenic | 20.0% |
| ! | AGAATACTTCAAATTTAGCA+TGG | + | chr3.4:79518830-79518849 | MS.gene045290:CDS | 25.0% |
| ! | ATTCTTGAGATTTATACCAT+AGG | - | chr3.4:79518331-79518350 | None:intergenic | 25.0% |
| ! | GAATAATTCATCATCAAATG+AGG | + | chr3.4:79517672-79517691 | MS.gene045290:CDS | 25.0% |
| ! | TTAATATTCATTCTGCAGAT+GGG | + | chr3.4:79518776-79518795 | MS.gene045290:intron | 25.0% |
| ! | TTCAGTTTCTTTGTAAGAAA+TGG | + | chr3.4:79518613-79518632 | MS.gene045290:intron | 25.0% |
| ! | TTCTTGAGATTTATACCATA+GGG | - | chr3.4:79518330-79518349 | None:intergenic | 25.0% |
| ! | TTTAAACAAACCAAAAAGAC+AGG | - | chr3.4:79518135-79518154 | None:intergenic | 25.0% |
| ! | TTTAATATTCATTCTGCAGA+TGG | + | chr3.4:79518775-79518794 | MS.gene045290:intron | 25.0% |
| !! | GCTAAATTTGAAGTATTCTT+TGG | - | chr3.4:79518829-79518848 | None:intergenic | 25.0% |
| !! | TATTCTTTGGAAAAGCAAAT+GGG | - | chr3.4:79518816-79518835 | None:intergenic | 25.0% |
| !!! | AGTTTTGAGCATAAAATCTT+TGG | - | chr3.4:79518887-79518906 | None:intergenic | 25.0% |
| !!! | TAACAGTTGTTTCTACAAAT+AGG | - | chr3.4:79519141-79519160 | None:intergenic | 25.0% |
| AAGATCGAGAAATCAATGTT+GGG | + | chr3.4:79517566-79517585 | MS.gene045290:CDS | 30.0% | |
| ACATCAATGTTAACTCAAGA+AGG | + | chr3.4:79517703-79517722 | MS.gene045290:CDS | 30.0% | |
| TAAACTAATGAAGCAAGACA+AGG | - | chr3.4:79518377-79518396 | None:intergenic | 30.0% | |
| TACAACCAATAGCATATCAA+TGG | - | chr3.4:79518513-79518532 | None:intergenic | 30.0% | |
| TCTTGAGATTTATACCATAG+GGG | - | chr3.4:79518329-79518348 | None:intergenic | 30.0% | |
| TGAAACATGCAATAAACTAG+AGG | - | chr3.4:79519099-79519118 | None:intergenic | 30.0% | |
| TGAATGGCGATATCTTAAAA+AGG | + | chr3.4:79518424-79518443 | MS.gene045290:intron | 30.0% | |
| TGAGCATAAAATCTTTGGTT+TGG | - | chr3.4:79518882-79518901 | None:intergenic | 30.0% | |
| TGGTAAAAGATTCTACTTTG+AGG | + | chr3.4:79517819-79517838 | MS.gene045290:CDS | 30.0% | |
| TTAACATCTTGTGTAGCATT+TGG | - | chr3.4:79519220-79519239 | None:intergenic | 30.0% | |
| TTAAGATTAGAGAACAACCT+GGG | - | chr3.4:79518999-79519018 | None:intergenic | 30.0% | |
| TTTAGACGATTCTTTCTTAC+CGG | - | chr3.4:79517746-79517765 | None:intergenic | 30.0% | |
| ! | AAGGCTAATTGATCTTTTAG+GGG | - | chr3.4:79518358-79518377 | None:intergenic | 30.0% |
| ! | ACAAGGCTAATTGATCTTTT+AGG | - | chr3.4:79518360-79518379 | None:intergenic | 30.0% |
| ! | ATATGCTATTGGTTGTATGA+AGG | + | chr3.4:79518516-79518535 | MS.gene045290:intron | 30.0% |
| ! | ATTGTCAATGTCATTTGCAT+TGG | - | chr3.4:79518106-79518125 | None:intergenic | 30.0% |
| ! | CAAGGCTAATTGATCTTTTA+GGG | - | chr3.4:79518359-79518378 | None:intergenic | 30.0% |
| ! | GAGCATAAAATCTTTGGTTT+GGG | - | chr3.4:79518881-79518900 | None:intergenic | 30.0% |
| ! | GTATTCTTTGGAAAAGCAAA+TGG | - | chr3.4:79518817-79518836 | None:intergenic | 30.0% |
| ! | TTTAAGATTAGAGAACAACC+TGG | - | chr3.4:79519000-79519019 | None:intergenic | 30.0% |
| !! | AGCATAAAATCTTTGGTTTG+GGG | - | chr3.4:79518880-79518899 | None:intergenic | 30.0% |
| !!! | ACAAACTTGCTGAAGTTTTT+TGG | - | chr3.4:79518910-79518929 | None:intergenic | 30.0% |
| AACCAATAGCATATCAATGG+AGG | - | chr3.4:79518510-79518529 | None:intergenic | 35.0% | |
| AACCTCCATTGATATGCTAT+TGG | + | chr3.4:79518505-79518524 | MS.gene045290:intron | 35.0% | |
| ACAGGTTACAATCTACTGAT+TGG | + | chr3.4:79517533-79517552 | MS.gene045290:CDS | 35.0% | |
| ATCCCAAACGAGAAACAAAA+TGG | - | chr3.4:79518405-79518424 | None:intergenic | 35.0% | |
| CAATATTCCAGTGACGAAAA+AGG | - | chr3.4:79519361-79519380 | None:intergenic | 35.0% | |
| CACAAATTCTATGTTTCCGA+TGG | - | chr3.4:79517996-79518015 | None:intergenic | 35.0% | |
| CTTGAGATTTATACCATAGG+GGG | - | chr3.4:79518328-79518347 | None:intergenic | 35.0% | |
| CTTTGGCTAAAGATTACCAT+CGG | + | chr3.4:79517977-79517996 | MS.gene045290:CDS | 35.0% | |
| GAAGATCGAGAAATCAATGT+TGG | + | chr3.4:79517565-79517584 | MS.gene045290:CDS | 35.0% | |
| GGTAAGAAAGAATCGTCTAA+AGG | + | chr3.4:79517745-79517764 | MS.gene045290:CDS | 35.0% | |
| TCTTCTGTCAACCAATTCAT+GGG | + | chr3.4:79519252-79519271 | MS.gene045290:CDS | 35.0% | |
| TTGCATTGTGATCTGAAAGA+CGG | - | chr3.4:79518248-79518267 | None:intergenic | 35.0% | |
| ! | AATAAGAAATCATGACTCGG+AGG | - | chr3.4:79519030-79519049 | None:intergenic | 35.0% |
| ! | ACAATCTACTGATTGGAGTA+TGG | + | chr3.4:79517540-79517559 | MS.gene045290:CDS | 35.0% |
| ! | TTTGGATCAGACAAGGTATT+TGG | - | chr3.4:79519202-79519221 | None:intergenic | 35.0% |
| !! | CAATTAGCTTCCTGTCTTTT+TGG | + | chr3.4:79518122-79518141 | MS.gene045290:intron | 35.0% |
| !! | CAGTTGTTTCTACAAATAGG+AGG | - | chr3.4:79519138-79519157 | None:intergenic | 35.0% |
| !! | CTAATTGATCTTTTAGGGGA+GGG | - | chr3.4:79518354-79518373 | None:intergenic | 35.0% |
| !! | CTTTTTCGTCACTGGAATAT+TGG | + | chr3.4:79519359-79519378 | MS.gene045290:CDS | 35.0% |
| !! | GCATAAAATCTTTGGTTTGG+GGG | - | chr3.4:79518879-79518898 | None:intergenic | 35.0% |
| !!! | TGCCATTTTGTTTCTCGTTT+GGG | + | chr3.4:79518400-79518419 | MS.gene045290:intron | 35.0% |
| !!! | TTGCCATTTTGTTTCTCGTT+TGG | + | chr3.4:79518399-79518418 | MS.gene045290:intron | 35.0% |
| AATCTTGGTTCCTTTGCCTT+TGG | - | chr3.4:79518971-79518990 | None:intergenic | 40.0% | |
| ATATTCATTCTGCAGATGGG+AGG | + | chr3.4:79518779-79518798 | MS.gene045290:intron | 40.0% | |
| ATCATATGGACCCCATGAAT+TGG | - | chr3.4:79519266-79519285 | None:intergenic | 40.0% | |
| ATGCTATCTGATGATTCCAG+TGG | + | chr3.4:79518934-79518953 | MS.gene045290:CDS | 40.0% | |
| CAAGGGAAACTTGACTCATA+GGG | - | chr3.4:79519481-79519500 | None:intergenic | 40.0% | |
| CACTTTAGATCCAAAGGCAA+AGG | + | chr3.4:79518958-79518977 | MS.gene045290:CDS | 40.0% | |
| CTCTTCTGTCAACCAATTCA+TGG | + | chr3.4:79519251-79519270 | MS.gene045290:CDS | 40.0% | |
| CTTCTGTCAACCAATTCATG+GGG | + | chr3.4:79519253-79519272 | MS.gene045290:CDS | 40.0% | |
| CTTTGCCTTTGGATCTAAAG+TGG | - | chr3.4:79518960-79518979 | None:intergenic | 40.0% | |
| GGATTCAATTTCACTGCTTC+AGG | - | chr3.4:79518288-79518307 | None:intergenic | 40.0% | |
| GGTAATCTTTAGCCAAAGAG+AGG | - | chr3.4:79517975-79517994 | None:intergenic | 40.0% | |
| GTCTTTCAGATCACAATGCA+AGG | + | chr3.4:79518247-79518266 | MS.gene045290:CDS | 40.0% | |
| TGTAGCATTTGGATCAGACA+AGG | - | chr3.4:79519209-79519228 | None:intergenic | 40.0% | |
| ! | ATCTACTGATTGGAGTATGG+AGG | + | chr3.4:79517543-79517562 | MS.gene045290:CDS | 40.0% |
| ! | CATCAAACTCTGAGAGATCA+TGG | - | chr3.4:79518203-79518222 | None:intergenic | 40.0% |
| ! | TACTTTGAGGATGTTAGCAC+TGG | + | chr3.4:79517832-79517851 | MS.gene045290:CDS | 40.0% |
| ! | TGTTTCTCGTTTGGGATGAA+TGG | + | chr3.4:79518408-79518427 | MS.gene045290:intron | 40.0% |
| !! | GCTAATTGATCTTTTAGGGG+AGG | - | chr3.4:79518355-79518374 | None:intergenic | 40.0% |
| AATTTCACTGCTTCAGGCTG+AGG | - | chr3.4:79518282-79518301 | None:intergenic | 45.0% | |
| AGACGATTCTTTCTTACCGG+TGG | - | chr3.4:79517743-79517762 | None:intergenic | 45.0% | |
| ATACACTCCAATCGGACAAC+CGG | + | chr3.4:79519304-79519323 | MS.gene045290:CDS | 45.0% | |
| CAAAAGCAGCAGAAACTCAC+AGG | + | chr3.4:79517515-79517534 | MS.gene045290:CDS | 45.0% | |
| CCATTGCTCACACTAAAGCT+TGG | + | chr3.4:79517799-79517818 | MS.gene045290:CDS | 45.0% | |
| CCTTTCTTTCCGCACAAAAG+AGG | - | chr3.4:79517892-79517911 | None:intergenic | 45.0% | |
| GCAAGGGAAACTTGACTCAT+AGG | - | chr3.4:79519482-79519501 | None:intergenic | 45.0% | |
| GCTGCTGGAGAAGTTTCAAT+TGG | - | chr3.4:79517775-79517794 | None:intergenic | 45.0% | |
| TAATGCATGCTTCATCCTCG+AGG | + | chr3.4:79517632-79517651 | MS.gene045290:CDS | 45.0% | |
| TGTCCGATTGGAGTGTATGA+GGG | - | chr3.4:79519302-79519321 | None:intergenic | 45.0% | |
| TTCTTACCGGTGGAATTGTC+TGG | - | chr3.4:79517733-79517752 | None:intergenic | 45.0% | |
| TTGACAGAAGAGAGAGAGCA+CGG | - | chr3.4:79519243-79519262 | None:intergenic | 45.0% | |
| TTGATTCCATCTGGTGGTAG+TGG | + | chr3.4:79517592-79517611 | MS.gene045290:CDS | 45.0% | |
| TTGGCACACTGATCAACATC+AGG | + | chr3.4:79519378-79519397 | MS.gene045290:CDS | 45.0% | |
| TTGTCCGATTGGAGTGTATG+AGG | - | chr3.4:79519303-79519322 | None:intergenic | 45.0% | |
| ! | AGTGGCCACTTTAGATCCAA+AGG | + | chr3.4:79518952-79518971 | MS.gene045290:CDS | 45.0% |
| ! | CCAAGCTTTAGTGTGAGCAA+TGG | - | chr3.4:79517802-79517821 | None:intergenic | 45.0% |
| ! | CCTCTTTTGTGCGGAAAGAA+AGG | + | chr3.4:79517889-79517908 | MS.gene045290:CDS | 45.0% |
| ! | GATTTTGCCAGCAATGTAGC+AGG | + | chr3.4:79518064-79518083 | MS.gene045290:CDS | 45.0% |
| ! | TCTGCAGTTCCTCTTTTGTG+CGG | + | chr3.4:79517880-79517899 | MS.gene045290:CDS | 45.0% |
| ! | TTTGGATCTAAAGTGGCCAC+TGG | - | chr3.4:79518953-79518972 | None:intergenic | 45.0% |
| !! | GTTGGGATGTTGATTCCATC+TGG | + | chr3.4:79517583-79517602 | MS.gene045290:CDS | 45.0% |
| AAACCAGCTACTACCACCAC+AGG | - | chr3.4:79518036-79518055 | None:intergenic | 50.0% | |
| AAGAGGAACTGCAGAGGAAG+AGG | - | chr3.4:79517875-79517894 | None:intergenic | 50.0% | |
| AAGTTTCCCTTGCAACCAGC+TGG | + | chr3.4:79519489-79519508 | MS.gene045290:CDS | 50.0% | |
| ACAACCTGGGACAGCAATCT+TGG | - | chr3.4:79518986-79519005 | None:intergenic | 50.0% | |
| ACATGCACCTGCTACATTGC+TGG | - | chr3.4:79518074-79518093 | None:intergenic | 50.0% | |
| AGTGGAACGTGAAATCTCCC+GGG | + | chr3.4:79517458-79517477 | MS.gene045290:CDS | 50.0% | |
| ATTGGAGTGTATGAGGGAGG+GGG | - | chr3.4:79519296-79519315 | None:intergenic | 50.0% | |
| CAGTCATTCCAAATCGCCTG+TGG | + | chr3.4:79518017-79518036 | MS.gene045290:CDS | 50.0% | |
| CATGCTAAATCCAAGCTGCC+AGG | + | chr3.4:79517930-79517949 | MS.gene045290:CDS | 50.0% | |
| CCTCCCTCATACACTCCAAT+CGG | + | chr3.4:79519296-79519315 | MS.gene045290:CDS | 50.0% | |
| CGATTGGAGTGTATGAGGGA+GGG | - | chr3.4:79519298-79519317 | None:intergenic | 50.0% | |
| CTGAGCAGTTGCATACTGAG+GGG | - | chr3.4:79519332-79519351 | None:intergenic | 50.0% | |
| CTTTAGCCAAAGAGAGGTCG+AGG | - | chr3.4:79517969-79517988 | None:intergenic | 50.0% | |
| GAATAGCCACTACCACCAGA+TGG | - | chr3.4:79517601-79517620 | None:intergenic | 50.0% | |
| GAGTGGAACGTGAAATCTCC+CGG | + | chr3.4:79517457-79517476 | MS.gene045290:CDS | 50.0% | |
| GATTGGAGTGTATGAGGGAG+GGG | - | chr3.4:79519297-79519316 | None:intergenic | 50.0% | |
| GCACAAAAGAGGAACTGCAG+AGG | - | chr3.4:79517881-79517900 | None:intergenic | 50.0% | |
| GCTGAGCAGTTGCATACTGA+GGG | - | chr3.4:79519333-79519352 | None:intergenic | 50.0% | |
| GGTTCTCCAGACAATTCCAC+CGG | + | chr3.4:79517724-79517743 | MS.gene045290:CDS | 50.0% | |
| GTAACCCGAGAACGAGATAC+AGG | - | chr3.4:79519416-79519435 | None:intergenic | 50.0% | |
| TACTACCACCACAGGCGATT+TGG | - | chr3.4:79518028-79518047 | None:intergenic | 50.0% | |
| TCATTCCAAATCGCCTGTGG+TGG | + | chr3.4:79518020-79518039 | MS.gene045290:CDS | 50.0% | |
| TGCAGAGGAAGAGGCTTTCT+TGG | - | chr3.4:79517866-79517885 | None:intergenic | 50.0% | |
| TGTGGTGGTAGTAGCTGGTT+TGG | + | chr3.4:79518035-79518054 | MS.gene045290:CDS | 50.0% | |
| ! | AGCAGATTTTGAGCTCCTCG+AGG | - | chr3.4:79517650-79517669 | None:intergenic | 50.0% |
| !! | GGGATGTTGATTCCATCTGG+TGG | + | chr3.4:79517586-79517605 | MS.gene045290:CDS | 50.0% |
| AATCCAAGCTGCCAGGTGGA+AGG | + | chr3.4:79517937-79517956 | MS.gene045290:CDS | 55.0% | |
| ACGTGAAATCTCCCGGGCAA+TGG | + | chr3.4:79517464-79517483 | MS.gene045290:CDS | 55.0% | |
| AGCGCCTGTATCTCGTTCTC+GGG | + | chr3.4:79519409-79519428 | MS.gene045290:CDS | 55.0% | |
| CAGCGCCTGTATCTCGTTCT+CGG | + | chr3.4:79519408-79519427 | MS.gene045290:CDS | 55.0% | |
| CCGATTGGAGTGTATGAGGG+AGG | - | chr3.4:79519299-79519318 | None:intergenic | 55.0% | |
| CGCTGAGCAGTTGCATACTG+AGG | - | chr3.4:79519334-79519353 | None:intergenic | 55.0% | |
| CGTGAAATCTCCCGGGCAAT+GGG | + | chr3.4:79517465-79517484 | MS.gene045290:CDS | 55.0% | |
| GCAGATGGGAGGCAGACAAT+GGG | + | chr3.4:79518790-79518809 | MS.gene045290:intron | 55.0% | |
| GCTAAATCCAAGCTGCCAGG+TGG | + | chr3.4:79517933-79517952 | MS.gene045290:CDS | 55.0% | |
| GGAACCAAGATTGCTGTCCC+AGG | + | chr3.4:79518979-79518998 | MS.gene045290:CDS | 55.0% | |
| TGCAGATGGGAGGCAGACAA+TGG | + | chr3.4:79518789-79518808 | MS.gene045290:intron | 55.0% | |
| TTGGAGTGTATGAGGGAGGG+GGG | - | chr3.4:79519295-79519314 | None:intergenic | 55.0% | |
| TTGTGGCCTCGACCTCTCTT+TGG | + | chr3.4:79517960-79517979 | MS.gene045290:CDS | 55.0% | |
| ! | AGTTGCATACTGAGGGGTGC+CGG | - | chr3.4:79519326-79519345 | None:intergenic | 55.0% |
| ! | GAGGGGGGCTTGGTATCATA+TGG | - | chr3.4:79519280-79519299 | None:intergenic | 55.0% |
| ! | GTGAGCAATGGTTCTGCTGC+TGG | - | chr3.4:79517790-79517809 | None:intergenic | 55.0% |
| ! | GTTTTCCCAGTCCCATTGCC+CGG | - | chr3.4:79517479-79517498 | None:intergenic | 55.0% |
| ! | TTTTCCCAGTCCCATTGCCC+GGG | - | chr3.4:79517478-79517497 | None:intergenic | 55.0% |
| !! | AGCTTGCTGTTGGGCATGTC+TGG | - | chr3.4:79518856-79518875 | None:intergenic | 55.0% |
| !! | GCGCTCACCTTTTTCGTCAC+TGG | + | chr3.4:79519351-79519370 | MS.gene045290:CDS | 55.0% |
| !! | GTTTGGGGGAGCTTGCTGTT+GGG | - | chr3.4:79518865-79518884 | None:intergenic | 55.0% |
| AATCTCCCGGGCAATGGGAC+TGG | + | chr3.4:79517470-79517489 | MS.gene045290:CDS | 60.0% | |
| AGCTGCCAGGTGGAAGGTTG+TGG | + | chr3.4:79517943-79517962 | MS.gene045290:CDS | 60.0% | |
| ATCTCCCGGGCAATGGGACT+GGG | + | chr3.4:79517471-79517490 | MS.gene045290:CDS | 60.0% | |
| CAACCTTCCACCTGGCAGCT+TGG | - | chr3.4:79517943-79517962 | None:intergenic | 60.0% | |
| CGAGAACGAGATACAGGCGC+TGG | - | chr3.4:79519410-79519429 | None:intergenic | 60.0% | |
| GCTCTCTCTTCGTCCCCCTA+TGG | + | chr3.4:79518312-79518331 | MS.gene045290:CDS | 60.0% | |
| GGGGACGAAGAGAGAGCTGA+TGG | - | chr3.4:79518309-79518328 | None:intergenic | 60.0% | |
| TCGCCTGTGGTGGTAGTAGC+TGG | + | chr3.4:79518030-79518049 | MS.gene045290:CDS | 60.0% | |
| !! | GGTTTGGGGGAGCTTGCTGT+TGG | - | chr3.4:79518866-79518885 | None:intergenic | 60.0% |
| CGAGGCCACAACCTTCCACC+TGG | - | chr3.4:79517951-79517970 | None:intergenic | 65.0% | |
| GTGTATGAGGGAGGGGGGCT+TGG | - | chr3.4:79519290-79519309 | None:intergenic | 65.0% | |
| !! | AGGGGTGCCGGTTGTCCGAT+TGG | - | chr3.4:79519314-79519333 | None:intergenic | 65.0% |
| !! | CGAGATACAGGCGCTGGAGC+TGG | - | chr3.4:79519404-79519423 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 79517454 | 79519516 | 79517454 | ID=MS.gene045290 |
| chr3.4 | mRNA | 79517454 | 79519516 | 79517454 | ID=MS.gene045290.t1;Parent=MS.gene045290 |
| chr3.4 | exon | 79517454 | 79518085 | 79517454 | ID=MS.gene045290.t1.exon1;Parent=MS.gene045290.t1 |
| chr3.4 | CDS | 79517454 | 79518085 | 79517454 | ID=cds.MS.gene045290.t1;Parent=MS.gene045290.t1 |
| chr3.4 | exon | 79518197 | 79518333 | 79518197 | ID=MS.gene045290.t1.exon2;Parent=MS.gene045290.t1 |
| chr3.4 | CDS | 79518197 | 79518333 | 79518197 | ID=cds.MS.gene045290.t1;Parent=MS.gene045290.t1 |
| chr3.4 | exon | 79518794 | 79519000 | 79518794 | ID=MS.gene045290.t1.exon3;Parent=MS.gene045290.t1 |
| chr3.4 | CDS | 79518794 | 79519000 | 79518794 | ID=cds.MS.gene045290.t1;Parent=MS.gene045290.t1 |
| chr3.4 | exon | 79519149 | 79519516 | 79519149 | ID=MS.gene045290.t1.exon4;Parent=MS.gene045290.t1 |
| chr3.4 | CDS | 79519149 | 79519516 | 79519149 | ID=cds.MS.gene045290.t1;Parent=MS.gene045290.t1 |
| Gene Sequence |
| Protein sequence |
