AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene045305

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene045305.t1 MTR_3g084980 99.187 246 0 1 1 246 1 244 0.0 501
MS.gene045305.t1 MTR_8g097090 84.211 247 33 5 1 246 1 242 3.21e-149 416
MS.gene045305.t1 MTR_6g015975 65.759 257 68 6 1 245 1 249 2.62e-110 318
MS.gene045305.t1 MTR_7g016600 64.314 255 74 6 1 245 1 248 5.19e-105 304
MS.gene045305.t1 MTR_4g109810 56.195 226 87 5 1 222 1 218 8.77e-78 235
MS.gene045305.t1 MTR_8g033270 50.584 257 108 7 1 245 1 250 2.99e-74 226
MS.gene045305.t1 MTR_7g075850 49.805 257 109 7 1 245 1 249 4.08e-73 223
MS.gene045305.t1 MTR_4g109830 58.046 174 64 2 1 171 1 168 3.52e-59 187
MS.gene045305.t1 MTR_8g066260 55.556 171 73 1 1 171 1 168 3.08e-57 182
MS.gene045305.t1 MTR_6g464720 53.448 174 73 2 1 171 1 169 6.54e-54 174
MS.gene045305.t1 MTR_7g016630 46.939 196 99 2 1 196 1 191 2.02e-49 163
MS.gene045305.t1 MTR_5g046790 48.619 181 80 3 1 176 1 173 2.06e-49 161
MS.gene045305.t1 MTR_1g101970 49.425 174 79 3 1 171 1 168 6.86e-49 159
MS.gene045305.t1 MTR_8g087860 41.518 224 126 3 1 223 17 236 4.62e-47 156
MS.gene045305.t1 MTR_2g017865 46.591 176 88 3 1 175 16 186 2.64e-45 152
MS.gene045305.t1 MTR_5g046870 83.951 81 13 0 1 81 1 81 3.66e-45 147
MS.gene045305.t1 MTR_3g005530 47.191 178 84 3 1 175 1 171 5.01e-44 148
MS.gene045305.t1 MTR_4g102530 48.876 178 73 4 1 171 1 167 5.60e-44 147
MS.gene045305.t1 MTR_3g452380 48.315 178 82 4 1 175 16 186 2.80e-43 147
MS.gene045305.t1 MTR_8g033220 44.944 178 95 2 1 178 1 175 3.18e-42 143
MS.gene045305.t1 MTR_8g033220 44.944 178 95 2 1 178 1 175 3.97e-42 143
MS.gene045305.t1 MTR_7g075870 47.953 171 86 2 1 171 1 168 1.06e-41 142
MS.gene045305.t1 MTR_7g075870 47.953 171 85 3 1 171 1 167 6.34e-40 137
MS.gene045305.t1 MTR_2g009890 42.703 185 101 2 1 185 1 180 3.52e-38 134
MS.gene045305.t1 MTR_5g031000 36.574 216 131 2 1 216 1 210 1.34e-37 131
MS.gene045305.t1 MTR_5g031000 40.323 186 105 2 1 186 1 180 4.81e-37 130
MS.gene045305.t1 MTR_4g036050 41.520 171 98 1 1 171 1 169 5.05e-36 127
MS.gene045305.t1 MTR_5g046830 43.506 154 80 2 96 245 21 171 6.89e-35 123
MS.gene045305.t1 MTR_1g038300 39.535 172 103 1 1 171 1 172 1.83e-34 124
MS.gene045305.t1 MTR_1g053070 44.022 184 87 5 1 176 1 176 2.59e-34 124
MS.gene045305.t1 MTR_0003s0590 42.614 176 99 2 1 176 1 174 3.10e-34 124
MS.gene045305.t1 MTR_4g036050 41.250 160 92 1 1 160 1 158 6.95e-34 121
MS.gene045305.t1 MTR_4g036050 42.857 147 82 1 1 147 1 145 4.79e-33 118
MS.gene045305.t1 MTR_4g036050 43.151 146 81 1 1 146 1 144 8.61e-33 118
MS.gene045305.t1 MTR_3g088615 41.333 150 79 3 1 149 1 142 2.95e-31 114
MS.gene045305.t1 MTR_3g113030 41.615 161 86 2 1 161 1 153 3.03e-31 115
MS.gene045305.t1 MTR_5g032150 40.678 177 101 3 1 177 1 173 5.19e-30 112
MS.gene045305.t1 MTR_2g461710 84.746 59 9 0 1 59 1 59 5.47e-30 107
MS.gene045305.t1 MTR_5g066180 37.073 205 107 5 1 192 1 196 2.02e-29 110
MS.gene045305.t1 MTR_1g029670 35.567 194 101 5 1 186 1 178 2.83e-29 108
MS.gene045305.t1 MTR_5g032520 38.587 184 95 3 1 177 1 173 6.31e-29 109
MS.gene045305.t1 MTR_4g093970 38.547 179 94 4 1 172 27 196 1.07e-27 106
MS.gene045305.t1 MTR_5g021270 40.260 154 81 3 1 150 1 147 1.08e-26 103
MS.gene045305.t1 MTR_5g021270 40.260 154 81 3 1 150 1 147 1.08e-26 103
MS.gene045305.t1 MTR_5g066960 63.333 60 22 0 1 60 1 60 2.06e-22 87.4
MS.gene045305.t1 MTR_4g084740 57.143 70 30 0 1 70 1 70 3.01e-21 90.9
MS.gene045305.t1 MTR_3g102570 60.000 70 28 0 1 70 1 70 4.40e-21 90.5
MS.gene045305.t1 MTR_4g093030 61.667 60 23 0 1 60 1 60 4.39e-20 84.3
MS.gene045305.t1 MTR_2g461760 37.500 136 76 2 63 195 1 130 9.18e-19 81.3
MS.gene045305.t1 MTR_2g461760 37.500 136 76 2 63 195 1 130 9.39e-19 81.3
MS.gene045305.t1 MTR_1g041615 80.000 45 9 0 16 60 20 64 3.51e-18 78.6
MS.gene045305.t1 MTR_3g052920 44.330 97 51 1 2 95 9 105 2.63e-16 75.9
MS.gene045305.t1 MTR_2g030740 58.929 56 23 0 2 57 9 64 1.13e-15 74.3
MS.gene045305.t1 MTR_1g108580 57.143 56 24 0 2 57 9 64 3.49e-15 72.8
MS.gene045305.t1 MTR_1g108510 47.826 69 35 1 2 70 9 76 6.27e-15 72.0
MS.gene045305.t1 MTR_3g030770 55.357 56 25 0 2 57 9 64 6.72e-15 72.0
MS.gene045305.t1 MTR_8g086290 55.357 56 25 0 2 57 12 67 9.26e-15 70.5
MS.gene045305.t1 MTR_1g047550 40.816 98 53 1 1 93 1 98 1.00e-14 70.5
MS.gene045305.t1 MTR_8g079502 54.386 57 26 0 1 57 1 57 1.42e-14 70.1
MS.gene045305.t1 MTR_2g105290 56.140 57 25 0 1 57 11 67 1.42e-14 70.1
MS.gene045305.t1 MTR_8g051580 52.632 57 27 0 1 57 1 57 1.62e-14 70.1
MS.gene045305.t1 MTR_2g093190 53.571 56 26 0 2 57 9 64 1.91e-14 70.5
MS.gene045305.t1 MTR_8g043650 41.237 97 54 1 2 95 9 105 2.43e-14 70.5
MS.gene045305.t1 MTR_3g052870 41.237 97 54 1 2 95 9 105 2.69e-14 70.1
MS.gene045305.t1 MTR_1g105920 41.237 97 54 1 2 95 9 105 2.71e-14 70.5
MS.gene045305.t1 MTR_5g041650 31.522 184 96 7 1 158 38 217 4.83e-14 71.2
MS.gene045305.t1 MTR_1g105910 55.357 56 25 0 2 57 9 64 5.75e-14 69.3
MS.gene045305.t1 MTR_1g075600 47.826 69 35 1 2 70 9 76 5.80e-14 69.3
MS.gene045305.t1 MTR_1g012570 55.357 56 25 0 2 57 9 64 7.67e-14 69.3
MS.gene045305.t1 MTR_1g054265 52.632 57 27 0 1 57 1 57 8.19e-14 67.8
MS.gene045305.t1 MTR_1g077360 55.357 56 25 0 2 57 9 64 9.37e-14 68.9
MS.gene045305.t1 MTR_4g094632 47.541 61 32 0 1 61 1 61 1.29e-13 67.0
MS.gene045305.t1 MTR_5g045560 54.386 57 26 0 1 57 8 64 1.60e-13 68.2
MS.gene045305.t1 MTR_1g063160 50.877 57 28 0 1 57 1 57 2.08e-13 67.0
MS.gene045305.t1 MTR_0121s0100 51.786 56 27 0 2 57 9 64 2.10e-13 65.9
MS.gene045305.t1 MTR_4g131030 50.877 57 28 0 1 57 1 57 2.44e-13 67.4
MS.gene045305.t1 MTR_2g085280 46.377 69 36 1 2 70 9 76 3.38e-13 67.4
MS.gene045305.t1 MTR_2g085250 46.377 69 36 1 2 70 9 76 3.42e-13 67.4
MS.gene045305.t1 MTR_1g106070 39.175 97 56 1 2 95 9 105 7.10e-13 65.5
MS.gene045305.t1 MTR_5g055100 53.571 56 26 0 2 57 9 64 9.67e-13 66.2
MS.gene045305.t1 MTR_5g053390 53.571 56 26 0 2 57 9 64 1.06e-12 65.9
MS.gene045305.t1 MTR_4g108720 50.943 53 26 0 1 53 1 53 2.39e-12 66.2
MS.gene045305.t1 MTR_4g094638 45.763 59 32 0 1 59 1 59 2.92e-12 63.5
MS.gene045305.t1 MTR_7g028448 42.105 95 33 3 16 106 26 102 3.42e-12 63.2
MS.gene045305.t1 MTR_4g036915 42.105 95 33 3 16 106 26 102 3.42e-12 63.2
MS.gene045305.t1 MTR_0121s0080 40.449 89 47 3 2 88 7 91 7.09e-12 63.5
MS.gene045305.t1 MTR_3g080940 47.368 57 30 0 1 57 8 64 1.38e-11 62.4
MS.gene045305.t1 MTR_8g046350 47.368 57 30 0 1 57 1 57 1.43e-11 61.6
MS.gene045305.t1 MTR_3g030780 48.214 56 29 0 2 57 9 64 2.29e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene045305.t1 AT1G24260 75.403 248 56 4 1 246 1 245 2.51e-126 358
MS.gene045305.t1 AT1G24260 75.403 248 55 5 1 246 1 244 2.66e-124 353
MS.gene045305.t1 AT1G24260 72.874 247 50 4 1 246 1 231 1.97e-118 338
MS.gene045305.t1 AT3G02310 63.281 256 76 7 1 245 1 249 5.81e-100 291
MS.gene045305.t1 AT5G15800 61.479 257 80 6 1 245 1 250 1.55e-98 288
MS.gene045305.t1 AT5G15800 65.789 228 64 5 1 221 1 221 4.62e-96 282
MS.gene045305.t1 AT3G02310 80.117 171 31 2 1 171 1 168 3.09e-90 265
MS.gene045305.t1 AT2G03710 48.106 264 111 7 1 245 1 257 3.92e-73 224
MS.gene045305.t1 AT2G03710 48.289 263 111 7 1 245 1 256 3.93e-73 223
MS.gene045305.t1 AT2G03710 61.364 176 63 2 1 175 1 172 6.68e-70 213
MS.gene045305.t1 AT2G45650 47.082 257 118 8 1 245 1 251 2.51e-65 203
MS.gene045305.t1 AT1G26310 43.939 264 117 7 1 244 1 253 2.51e-58 186
MS.gene045305.t1 AT1G69120 51.381 181 75 2 1 176 1 173 3.28e-57 182
MS.gene045305.t1 AT1G69120 51.381 181 75 2 1 176 1 173 2.61e-56 181
MS.gene045305.t1 AT5G60910 52.514 179 76 2 1 176 1 173 6.56e-55 176
MS.gene045305.t1 AT3G61120 52.717 184 81 2 1 184 1 178 1.20e-54 176
MS.gene045305.t1 AT4G18960 46.561 189 91 3 2 187 18 199 3.80e-47 157
MS.gene045305.t1 AT4G09960 46.486 185 86 4 1 179 1 178 2.50e-46 154
MS.gene045305.t1 AT4G09960 46.486 185 86 4 1 179 2 179 2.72e-46 154
MS.gene045305.t1 AT4G09960 46.486 185 86 4 1 179 11 188 3.58e-46 154
MS.gene045305.t1 AT4G09960 46.486 185 86 4 1 179 27 204 1.51e-45 153
MS.gene045305.t1 AT4G09960 48.447 161 77 3 1 160 96 251 2.53e-43 149
MS.gene045305.t1 AT3G30260 50.633 158 69 2 1 155 1 152 2.65e-43 147
MS.gene045305.t1 AT3G58780 45.213 188 92 5 1 184 22 202 3.68e-43 147
MS.gene045305.t1 AT3G58780 45.213 188 92 5 1 184 16 196 3.72e-43 147
MS.gene045305.t1 AT4G09960 51.007 149 63 3 1 146 1 142 4.61e-43 145
MS.gene045305.t1 AT4G11880 49.123 171 69 3 1 165 1 159 2.04e-42 142
MS.gene045305.t1 AT4G11880 49.123 171 69 3 1 165 1 159 2.04e-42 142
MS.gene045305.t1 AT2G42830 44.199 181 85 3 1 175 16 186 6.34e-42 143
MS.gene045305.t1 AT2G45660 42.079 202 98 5 1 195 1 190 1.62e-41 141
MS.gene045305.t1 AT4G11880 51.282 156 60 2 1 150 1 146 4.38e-41 140
MS.gene045305.t1 AT4G11880 51.282 156 60 2 1 150 1 146 4.38e-41 140
MS.gene045305.t1 AT4G22950 45.810 179 86 4 1 176 1 171 7.27e-41 138
MS.gene045305.t1 AT4G22950 46.111 180 86 4 1 177 1 172 1.89e-40 139
MS.gene045305.t1 AT4G22950 46.111 180 86 4 1 177 1 172 1.89e-40 139
MS.gene045305.t1 AT2G42830 44.262 183 84 4 1 175 16 188 2.09e-40 139
MS.gene045305.t1 AT5G62165 45.402 174 91 3 1 174 1 170 3.37e-40 138
MS.gene045305.t1 AT5G62165 45.402 174 91 3 1 174 1 170 3.37e-40 138
MS.gene045305.t1 AT5G62165 45.402 174 91 3 1 174 1 170 3.37e-40 138
MS.gene045305.t1 AT3G58780 43.617 188 88 5 1 184 16 189 3.73e-40 139
MS.gene045305.t1 AT3G58780 36.398 261 123 8 1 226 16 268 2.24e-39 137
MS.gene045305.t1 AT2G45660 45.509 167 73 4 1 160 1 156 2.67e-39 134
MS.gene045305.t1 AT3G58780 49.351 154 68 4 1 151 16 162 7.35e-39 136
MS.gene045305.t1 AT3G57230 42.286 175 96 2 1 175 1 170 1.83e-38 134
MS.gene045305.t1 AT3G57230 42.286 175 96 2 1 175 1 170 1.83e-38 134
MS.gene045305.t1 AT5G62165 45.625 160 83 3 1 160 1 156 5.37e-38 130
MS.gene045305.t1 AT5G62165 45.625 160 83 3 1 160 1 156 5.37e-38 130
MS.gene045305.t1 AT5G62165 45.625 160 83 3 1 160 1 156 5.37e-38 130
MS.gene045305.t1 AT2G14210 36.017 236 134 3 1 223 1 232 1.88e-37 131
MS.gene045305.t1 AT2G14210 42.442 172 95 1 1 172 1 168 4.13e-37 130
MS.gene045305.t1 AT5G62165 40.816 196 109 5 1 195 1 190 7.01e-37 129
MS.gene045305.t1 AT5G62165 40.816 196 109 5 1 195 1 190 7.01e-37 129
MS.gene045305.t1 AT5G62165 45.333 150 78 3 1 150 1 146 3.00e-36 126
MS.gene045305.t1 AT5G62165 45.333 150 78 3 1 150 1 146 3.00e-36 126
MS.gene045305.t1 AT5G62165 45.333 150 78 3 1 150 1 146 3.00e-36 126
MS.gene045305.t1 AT5G62165 45.333 150 78 3 1 150 1 146 3.00e-36 126
MS.gene045305.t1 AT5G62165 45.333 150 78 3 1 150 1 146 3.00e-36 126
MS.gene045305.t1 AT3G57390 41.667 180 100 2 1 176 1 179 3.57e-36 128
MS.gene045305.t1 AT3G57390 41.667 180 100 2 1 176 1 179 8.89e-36 128
MS.gene045305.t1 AT3G57230 47.552 143 70 2 1 143 1 138 1.84e-35 124
MS.gene045305.t1 AT4G37940 39.344 183 92 3 1 176 1 171 2.82e-35 125
MS.gene045305.t1 AT2G22630 40.909 176 99 2 1 176 1 171 3.55e-35 125
MS.gene045305.t1 AT2G22630 40.909 176 99 2 1 176 1 171 3.55e-35 125
MS.gene045305.t1 AT5G13790 43.182 176 89 3 1 176 1 165 9.04e-35 125
MS.gene045305.t1 AT5G13790 44.318 176 90 3 1 176 1 168 1.09e-34 125
MS.gene045305.t1 AT5G51870 36.937 222 118 4 1 221 1 201 1.53e-33 120
MS.gene045305.t1 AT1G71692 37.879 198 119 2 1 194 1 198 2.70e-33 120
MS.gene045305.t1 AT2G22540 38.506 174 103 2 1 174 1 170 2.89e-33 120
MS.gene045305.t1 AT2G22540 38.506 174 103 2 1 174 1 170 2.89e-33 120
MS.gene045305.t1 AT4G37940 40.936 171 96 2 1 171 1 166 5.13e-33 119
MS.gene045305.t1 AT5G51860 41.463 164 93 2 1 164 1 161 1.44e-32 118
MS.gene045305.t1 AT5G51870 41.954 174 97 3 1 173 11 181 1.48e-32 119
MS.gene045305.t1 AT5G51870 41.954 174 97 3 1 173 1 171 1.64e-32 118
MS.gene045305.t1 AT5G51860 41.463 164 93 2 1 164 1 161 1.75e-32 118
MS.gene045305.t1 AT5G10140 41.875 160 82 1 1 160 1 149 1.82e-32 117
MS.gene045305.t1 AT5G23260 42.012 169 91 4 1 168 1 163 2.09e-32 119
MS.gene045305.t1 AT5G23260 42.012 169 91 4 1 168 17 179 3.28e-32 119
MS.gene045305.t1 AT5G10140 42.045 176 91 1 1 176 1 165 3.74e-32 117
MS.gene045305.t1 AT5G20240 35.556 225 113 7 1 219 1 199 5.11e-32 117
MS.gene045305.t1 AT4G37940 44.755 143 74 2 1 143 1 138 5.87e-32 115
MS.gene045305.t1 AT5G65050 40.698 172 89 3 1 171 1 160 6.10e-32 115
MS.gene045305.t1 AT5G65050 40.698 172 89 3 1 171 1 160 9.37e-32 115
MS.gene045305.t1 AT5G10140 43.046 151 75 1 1 151 1 140 1.29e-31 114
MS.gene045305.t1 AT5G10140 43.046 151 75 1 1 151 1 140 3.11e-31 114
MS.gene045305.t1 AT5G65060 38.953 172 92 3 1 171 1 160 7.02e-31 113
MS.gene045305.t1 AT5G65060 38.953 172 92 3 1 171 1 160 7.04e-31 113
MS.gene045305.t1 AT5G62165 59.783 92 32 2 1 88 1 91 2.17e-30 109
MS.gene045305.t1 AT5G65050 39.535 172 80 3 1 171 1 149 3.38e-30 111
MS.gene045305.t1 AT5G51870 42.568 148 82 2 1 148 1 145 4.38e-30 110
MS.gene045305.t1 AT5G51870 42.568 148 82 2 1 148 24 168 1.26e-29 110
MS.gene045305.t1 AT5G20240 42.568 148 68 4 1 143 1 136 1.37e-29 108
MS.gene045305.t1 AT5G65050 38.636 176 91 4 1 171 1 164 1.77e-29 109
MS.gene045305.t1 AT5G23260 41.420 169 87 5 1 168 17 174 3.89e-29 110
MS.gene045305.t1 AT5G65080 42.500 160 81 3 1 160 8 156 4.68e-29 108
MS.gene045305.t1 AT5G65060 37.791 172 83 3 1 171 1 149 6.75e-29 108
MS.gene045305.t1 AT5G65070 38.220 191 105 3 1 191 1 178 8.90e-29 108
MS.gene045305.t1 AT5G23260 39.264 163 92 4 1 162 1 157 5.13e-28 107
MS.gene045305.t1 AT2G22540 35.057 174 104 2 1 174 1 165 1.13e-27 106
MS.gene045305.t1 AT4G24540 33.628 226 134 5 1 221 1 215 4.86e-27 104
MS.gene045305.t1 AT5G65070 35.071 211 115 4 1 191 1 209 1.72e-26 103
MS.gene045305.t1 AT1G31140 42.405 158 72 5 1 150 1 147 7.13e-26 100
MS.gene045305.t1 AT1G31140 41.250 160 73 5 1 150 1 149 1.06e-25 100
MS.gene045305.t1 AT1G77080 39.205 176 94 3 1 175 1 164 2.87e-25 99.0
MS.gene045305.t1 AT3G54340 32.558 215 109 5 1 207 1 187 3.54e-25 99.8
MS.gene045305.t1 AT1G77080 38.251 183 100 3 1 182 1 171 6.19e-25 97.4
MS.gene045305.t1 AT1G77080 39.535 172 91 3 1 171 1 160 1.62e-24 96.3
MS.gene045305.t1 AT5G65070 61.972 71 27 0 1 71 1 71 5.91e-24 94.0
MS.gene045305.t1 AT5G65070 61.972 71 27 0 1 71 1 71 2.12e-23 94.4
MS.gene045305.t1 AT5G65080 37.342 158 87 2 1 158 8 153 6.53e-23 92.8
MS.gene045305.t1 AT5G65070 33.180 217 112 6 1 191 1 210 2.84e-22 92.0
MS.gene045305.t1 AT1G77080 34.500 200 97 4 1 175 1 191 6.04e-22 90.9
MS.gene045305.t1 AT1G77080 35.429 175 98 1 1 175 1 160 1.56e-20 86.3
MS.gene045305.t1 AT1G77980 55.714 70 31 0 1 70 1 70 2.28e-20 88.6
MS.gene045305.t1 AT1G22130 55.714 70 31 0 1 70 1 70 2.94e-20 88.6
MS.gene045305.t1 AT1G69120 38.136 118 60 2 63 175 1 110 4.82e-18 79.7
MS.gene045305.t1 AT1G77950 52.857 70 33 0 1 70 1 70 1.11e-17 80.1
MS.gene045305.t1 AT1G77950 52.857 70 33 0 1 70 1 70 1.11e-17 80.1
MS.gene045305.t1 AT1G77950 52.857 70 33 0 1 70 1 70 1.11e-17 80.1
MS.gene045305.t1 AT1G77950 52.857 70 33 0 1 70 1 70 1.11e-17 80.1
MS.gene045305.t1 AT1G77080 34.375 160 90 1 1 160 1 145 5.54e-17 75.9
MS.gene045305.t1 AT4G37435 59.649 57 23 0 1 57 1 57 2.75e-16 74.7
MS.gene045305.t1 AT5G60910 38.462 117 63 2 63 176 1 111 3.53e-16 74.3
MS.gene045305.t1 AT1G01530 57.895 57 24 0 1 57 6 62 2.41e-15 73.6
MS.gene045305.t1 AT2G03060 47.297 74 38 1 1 73 1 74 3.12e-15 74.7
MS.gene045305.t1 AT2G03060 47.297 74 38 1 1 73 1 74 3.12e-15 74.7
MS.gene045305.t1 AT2G03060 47.297 74 38 1 1 73 1 74 3.12e-15 74.7
MS.gene045305.t1 AT2G03060 47.297 74 38 1 1 73 1 74 3.61e-15 74.3
MS.gene045305.t1 AT4G36590 32.716 162 84 4 2 143 7 163 1.09e-14 71.6
MS.gene045305.t1 AT1G18750 52.632 57 27 0 1 57 1 57 3.10e-14 71.6
MS.gene045305.t1 AT1G18750 52.632 57 27 0 1 57 1 57 3.48e-14 71.6
MS.gene045305.t1 AT1G18750 52.632 57 27 0 1 57 1 57 4.39e-14 71.2
MS.gene045305.t1 AT1G72350 49.206 63 32 0 2 64 43 105 9.42e-14 68.6
MS.gene045305.t1 AT1G65360 33.333 114 75 1 1 114 6 118 9.50e-14 68.9
MS.gene045305.t1 AT3G66656 49.123 57 29 0 1 57 1 57 1.27e-12 64.7
MS.gene045305.t1 AT5G60440 53.571 56 26 0 2 57 7 62 1.80e-12 66.2
MS.gene045305.t1 AT2G24840 30.488 164 98 3 1 149 62 224 2.23e-12 65.5
MS.gene045305.t1 AT2G34440 47.368 57 30 0 1 57 1 57 2.27e-12 63.9
MS.gene045305.t1 AT1G69540 26.667 270 149 12 1 242 1 249 4.22e-12 65.5
MS.gene045305.t1 AT3G04100 38.961 77 46 1 2 78 14 89 5.23e-12 63.5
MS.gene045305.t1 AT1G69540 26.667 270 149 12 1 242 1 249 5.38e-12 65.1
MS.gene045305.t1 AT1G47760 53.061 49 23 0 1 49 1 49 1.57e-11 62.0
MS.gene045305.t1 AT4G18960 27.326 172 110 4 54 221 55 215 2.39e-11 62.4
MS.gene045305.t1 AT4G18960 27.326 172 110 4 54 221 55 215 2.39e-11 62.4
MS.gene045305.t1 AT4G18960 30.000 130 82 2 54 180 55 178 5.04e-11 60.5
MS.gene045305.t1 AT1G29962 50.000 60 30 0 2 61 8 67 5.73e-11 60.5

Find 60 sgRNAs with CRISPR-Local

Find 188 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCGAACCAACGTTACAAAT+TGG 0.278441 3.1:-64834571 MS.gene045305:CDS
TTTAAGCTTATGCAGATATC+AGG 0.292514 3.1:-64834458 MS.gene045305:intron
TCAAGATCTTTACTGCTTAG+AGG 0.314850 3.1:+64835151 None:intergenic
TGTGGATCTGATTTGCTTCA+AGG 0.316708 3.1:+64835102 None:intergenic
GAATCTGAGTGCTGAAGATA+TGG 0.338691 3.1:-64834656 MS.gene045305:CDS
AGTGCTGAAGATATGGGATA+TGG 0.360357 3.1:-64834649 MS.gene045305:CDS
CTAGCTGATCCAGCATGAAT+TGG 0.361524 3.1:+64834979 None:intergenic
TGCTCACTCAAAGGAAGCTT+TGG 0.364390 3.1:-64836542 MS.gene045305:CDS
CCCATGTAGTTATTCATGCT+TGG 0.364997 3.1:+64834403 None:intergenic
CCATGTAGTTATTCATGCTT+GGG 0.382911 3.1:+64834404 None:intergenic
TCATCATCCAGGTCAAAATC+AGG 0.389043 3.1:-64834623 MS.gene045305:CDS
GCTGTCACCACCACTGATCC+TGG 0.399437 3.1:+64834430 None:intergenic
GGCCAAGATCTTCTCCCATT+AGG 0.418705 3.1:+64835173 None:intergenic
CTTGTACATTAGGAACCTAA+TGG 0.419408 3.1:-64835188 MS.gene045305:intron
ACCTTTGCAAAACGAAGAAA+TGG 0.432131 3.1:-64837955 MS.gene045305:CDS
AGGTATCAGAAATGCAACTA+TGG 0.438111 3.1:-64836580 MS.gene045305:CDS
AACGTTGGTTCGCACTCGAT+TGG 0.443300 3.1:+64834580 None:intergenic
CTCAAAGGAAGCTTTGGTAT+TGG 0.446907 3.1:-64836536 MS.gene045305:intron
GGATCAGTGGTGGTGACAGC+AGG 0.464006 3.1:-64834427 MS.gene045305:CDS
CAAACAGAGCTCTTAGACAA+AGG 0.465432 3.1:-64834826 MS.gene045305:CDS
GCGAACCAACGTTACAAATT+GGG 0.466289 3.1:-64834570 MS.gene045305:intron
AACCTAATGGGAGAAGATCT+TGG 0.476280 3.1:-64835175 MS.gene045305:CDS
GCAGGAATTAAGCAGCCAAC+AGG 0.478215 3.1:-64835341 MS.gene045305:intron
TGCAGATATCAGGCTGATCC+AGG 0.479365 3.1:-64834448 MS.gene045305:intron
AAAGATGGGAAGAGGAAGAG+TGG 0.480042 3.1:-64838016 None:intergenic
TTTGAGTGAGCATTAGCCTC+AGG 0.480988 3.1:+64836553 None:intergenic
AAGAGAAGAAAGATGGGAAG+AGG 0.486902 3.1:-64838024 None:intergenic
CAAGATCTTTACTGCTTAGA+GGG 0.491913 3.1:+64835152 None:intergenic
TTCTGTTCTTTGTGATGCAG+AGG 0.493852 3.1:-64837908 MS.gene045305:CDS
TAGCTGATCCAGCATGAATT+GGG 0.496848 3.1:+64834980 None:intergenic
CTCATCGTCTTCTCCAATAG+AGG 0.497888 3.1:-64837880 MS.gene045305:CDS
TTGTACATTAGGAACCTAAT+GGG 0.498132 3.1:-64835187 MS.gene045305:intron
CCCAAGCATGAATAACTACA+TGG 0.518064 3.1:-64834404 MS.gene045305:CDS
TCAGCTTCAAGTATTCCTGT+TGG 0.519289 3.1:+64835326 None:intergenic
CTTCAGCACTCAGATTCAGT+TGG 0.523222 3.1:+64834662 None:intergenic
TCTATAGACCCAATTCATGC+TGG 0.526193 3.1:-64834988 MS.gene045305:intron
GGATATGGGCGTCATCATCC+AGG 0.528249 3.1:-64834634 MS.gene045305:CDS
AAACAGAGCTCTTAGACAAA+GGG 0.529334 3.1:-64834825 MS.gene045305:intron
GCTAGGTGATCTTCAACGTA+AGG 0.552185 3.1:-64834961 MS.gene045305:intron
ACCGACCCAATTTGTAACGT+TGG 0.557280 3.1:+64834565 None:intergenic
TGAATAACTACATGGGTGGA+TGG 0.580988 3.1:-64834396 MS.gene045305:CDS
CAATTCATGCTGGATCAGCT+AGG 0.586915 3.1:-64834978 MS.gene045305:CDS
AAGATCTTGAAACACTTGAA+AGG 0.590834 3.1:-64835138 MS.gene045305:CDS
TGAGGCTAATGCTCACTCAA+AGG 0.602089 3.1:-64836551 MS.gene045305:CDS
GCATGCTCAAAACGCTTGAG+AGG 0.610774 3.1:-64836600 MS.gene045305:CDS
GTGCTGAAGATATGGGATAT+GGG 0.612448 3.1:-64834648 MS.gene045305:CDS
TGTAAAGTTGAGTACCCTTG+TGG 0.614190 3.1:+64835084 None:intergenic
CATCATCCAGGTCAAAATCA+GGG 0.621739 3.1:-64834622 MS.gene045305:CDS
AGCATGAATAACTACATGGG+TGG 0.631983 3.1:-64834400 MS.gene045305:CDS
TCAGGCTGATCCAGGATCAG+TGG 0.632515 3.1:-64834440 MS.gene045305:CDS
AATCTGAGTGCTGAAGATAT+GGG 0.638446 3.1:-64834655 MS.gene045305:CDS
GGCTGATCCAGGATCAGTGG+TGG 0.652694 3.1:-64834437 MS.gene045305:CDS
ATGCAACTATGGAGCACCTG+AGG 0.652818 3.1:-64836569 MS.gene045305:CDS
ACAGGAATACTTGAAGCTGA+AGG 0.654193 3.1:-64835323 MS.gene045305:CDS
GGATCTGATTTGCTTCAAGG+AGG 0.671453 3.1:+64835105 None:intergenic
CCAAGCATGAATAACTACAT+GGG 0.681040 3.1:-64834403 MS.gene045305:CDS
AATCTCTACAACGCACTCAG+AGG 0.684339 3.1:-64835291 MS.gene045305:intron
TGAAGCAAATCAGATCCACA+AGG 0.704252 3.1:-64835099 MS.gene045305:CDS
GAAGCAAATCAGATCCACAA+GGG 0.737410 3.1:-64835098 MS.gene045305:intron
GAAGGAACACTTGCTATGTG+AGG 0.772195 3.1:-64834849 MS.gene045305:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACTAATTCTTATATAATTAA+AGG + chr3.1:64836940-64836959 None:intergenic 10.0%
!!! TATTTGAAGTTATAAATTTT+TGG + chr3.1:64836913-64836932 None:intergenic 10.0%
!! AAAAAATGTATAGACAAAAA+AGG + chr3.1:64837347-64837366 None:intergenic 15.0%
!! AGTGAATATATTCATAATAT+TGG + chr3.1:64836834-64836853 None:intergenic 15.0%
!! ATACTATATATACATACATA+TGG - chr3.1:64837633-64837652 MS.gene045305:intron 15.0%
!! GAATAAAAATAGAAAAATGA+AGG - chr3.1:64836128-64836147 MS.gene045305:intron 15.0%
!!! AAAATTTTAATTAAGACAAG+AGG + chr3.1:64835385-64835404 None:intergenic 15.0%
!!! AAATTTTAATTAAGACAAGA+GGG + chr3.1:64835384-64835403 None:intergenic 15.0%
!!! ATTAAATTATGTCAAGTTTT+AGG - chr3.1:64835150-64835169 MS.gene045305:CDS 15.0%
!!! TATAAATGTTTTGTTTGTTT+GGG + chr3.1:64834867-64834886 None:intergenic 15.0%
!!! TTATAAATGTTTTGTTTGTT+TGG + chr3.1:64834868-64834887 None:intergenic 15.0%
!! AACTAATTCTACAAGTAATT+AGG - chr3.1:64836167-64836186 MS.gene045305:intron 20.0%
!! ATTGAATATTGGATTGAATT+GGG + chr3.1:64836351-64836370 None:intergenic 20.0%
!! CTAAAGAAATATTAACACAT+TGG - chr3.1:64836512-64836531 MS.gene045305:intron 20.0%
!! GTTGATATAATAATATAGAG+GGG + chr3.1:64835440-64835459 None:intergenic 20.0%
!! TATTGAATATTGGATTGAAT+TGG + chr3.1:64836352-64836371 None:intergenic 20.0%
!!! AGAATGTTATTGATTAGAAT+TGG - chr3.1:64836293-64836312 MS.gene045305:intron 20.0%
!!! GAATATATTCACTAAGATTT+TGG - chr3.1:64836841-64836860 MS.gene045305:intron 20.0%
!!! GGTTGATATAATAATATAGA+GGG + chr3.1:64835441-64835460 None:intergenic 20.0%
!!! TATATCGTTTATTTTCTTGT+TGG + chr3.1:64836469-64836488 None:intergenic 20.0%
!!! TGAGTTTTGATATTGAATAT+TGG + chr3.1:64836362-64836381 None:intergenic 20.0%
!!! TGGTTGATATAATAATATAG+AGG + chr3.1:64835442-64835461 None:intergenic 20.0%
!!! TTTTGTTTTTGTTCTTGTTT+AGG - chr3.1:64835927-64835946 MS.gene045305:intron 20.0%
! AATAATATAGAGGGGAAAAA+AGG + chr3.1:64835432-64835451 None:intergenic 25.0%
! AATTCTACAAGTAATTAGGA+AGG - chr3.1:64836171-64836190 MS.gene045305:intron 25.0%
! ACAAAATTAATCGTTCCAAT+TGG - chr3.1:64836610-64836629 MS.gene045305:intron 25.0%
! AGAAAAATGAGACATGAATT+AGG + chr3.1:64835220-64835239 None:intergenic 25.0%
! ATGATAGCAAACATGATAAA+GGG + chr3.1:64837491-64837510 None:intergenic 25.0%
! ATGTAAAGTTAGGAGAAATA+AGG + chr3.1:64836741-64836760 None:intergenic 25.0%
! ATGTGAACAAGAAAAATGAA+TGG + chr3.1:64835462-64835481 None:intergenic 25.0%
! ATTCTACAAGTAATTAGGAA+GGG - chr3.1:64836172-64836191 MS.gene045305:intron 25.0%
! CTAAGACAAAATGTAAAGTT+AGG + chr3.1:64836751-64836770 None:intergenic 25.0%
! GAAAAGATTGTTAGAAAACA+AGG + chr3.1:64835344-64835363 None:intergenic 25.0%
! TATGATAGCAAACATGATAA+AGG + chr3.1:64837492-64837511 None:intergenic 25.0%
! TTAGAAGAATCATGATGAAA+AGG + chr3.1:64835522-64835541 None:intergenic 25.0%
! TTGAATATTGGATTGAATTG+GGG + chr3.1:64836350-64836369 None:intergenic 25.0%
! TTTATAACCTACACAAATGA+AGG - chr3.1:64836419-64836438 MS.gene045305:intron 25.0%
! TTTCCATTCAAATTTGTCAA+TGG + chr3.1:64835983-64836002 None:intergenic 25.0%
!!! AAGTATTTGACTTGTACATT+AGG - chr3.1:64837201-64837220 MS.gene045305:intron 25.0%
!!! ATATATGATCAAGTATCGAT+CGG + chr3.1:64837136-64837155 None:intergenic 25.0%
!!! ATTGATAGCTGTTAATTTGT+TGG - chr3.1:64836009-64836028 MS.gene045305:intron 25.0%
!!! TGTCTATACATTTTTTGTCT+CGG - chr3.1:64837351-64837370 MS.gene045305:intron 25.0%
AAGATCTTGAAACACTTGAA+AGG - chr3.1:64837261-64837280 MS.gene045305:intron 30.0%
ACAATATCCTTCATTTGTGT+AGG + chr3.1:64836429-64836448 None:intergenic 30.0%
AGAAAAGAAAAAGAAACCCT+AGG + chr3.1:64835294-64835313 None:intergenic 30.0%
CAAATTGCTGTGATCAAATT+AGG + chr3.1:64835906-64835925 None:intergenic 30.0%
CAATTGGATCAAATAGAAAG+TGG - chr3.1:64836626-64836645 MS.gene045305:intron 30.0%
CACATCAATCCAAAAATTTC+TGG - chr3.1:64835023-64835042 MS.gene045305:intron 30.0%
CACTTTCTATTTGATCCAAT+TGG + chr3.1:64836628-64836647 None:intergenic 30.0%
GTACAAGTCAAATACTTCAT+TGG + chr3.1:64837198-64837217 None:intergenic 30.0%
GTATACCTTCTTCATAGAAA+AGG + chr3.1:64836790-64836809 None:intergenic 30.0%
TAACATTCTTATTCTTGTCG+TGG + chr3.1:64836282-64836301 None:intergenic 30.0%
TCATAGAAAAGGTCAAATCT+AGG + chr3.1:64836779-64836798 None:intergenic 30.0%
TTGCCATTGACAAATTTGAA+TGG - chr3.1:64835977-64835996 MS.gene045305:intron 30.0%
TTGTACATTAGGAACCTAAT+GGG - chr3.1:64837212-64837231 MS.gene045305:intron 30.0%
TTTAAGCTTATGCAGATATC+AGG - chr3.1:64837941-64837960 MS.gene045305:CDS 30.0%
! AAAGGTATAAACTCAAACAG+TGG + chr3.1:64834760-64834779 None:intergenic 30.0%
! ACATATGGTGTTGAAATTTG+AGG - chr3.1:64837648-64837667 MS.gene045305:intron 30.0%
! GAAGCAAAACCAGAAATTTT+TGG + chr3.1:64835035-64835054 None:intergenic 30.0%
! TTTGACCTTTTCTATGAAGA+AGG - chr3.1:64836782-64836801 MS.gene045305:intron 30.0%
!! ATGTGTTGATAGCTAAAAGA+GGG + chr3.1:64835008-64835027 None:intergenic 30.0%
!! ATGTTTTTGTTTCAGATGGA+AGG - chr3.1:64837696-64837715 MS.gene045305:intron 30.0%
!! TGTGATGTTTTTGTTTCAGA+TGG - chr3.1:64837692-64837711 MS.gene045305:intron 30.0%
!! TGTTTTTGTTTCAGATGGAA+GGG - chr3.1:64837697-64837716 MS.gene045305:intron 30.0%
!!! ATGTGCTGAGTAACATTTTT+TGG - chr3.1:64837375-64837394 MS.gene045305:intron 30.0%
!!! GTTTTTTCTACCAAAAATGC+AGG - chr3.1:64837040-64837059 MS.gene045305:intron 30.0%
!!! TTTTGTTTTTCATGCCTTGT+AGG + chr3.1:64836596-64836615 None:intergenic 30.0%
AAAAGGACTCGCTATGTAAA+TGG - chr3.1:64836102-64836121 MS.gene045305:intron 35.0%
AAACAGAGCTCTTAGACAAA+GGG - chr3.1:64837574-64837593 MS.gene045305:intron 35.0%
AATGAAGCCTGAATTGCTTT+AGG + chr3.1:64835095-64835114 None:intergenic 35.0%
AATGTCTTGGCGTTTATAGA+AGG - chr3.1:64834786-64834805 MS.gene045305:intron 35.0%
ACCTTTGCAAAACGAAGAAA+TGG - chr3.1:64834444-64834463 MS.gene045305:CDS 35.0%
AGGAGGGATACAAAAAGATT+CGG + chr3.1:64836069-64836088 None:intergenic 35.0%
AGGTATCAGAAATGCAACTA+TGG - chr3.1:64835819-64835838 MS.gene045305:intron 35.0%
ATGAACTAGAAGTTCGAATG+CGG - chr3.1:64836254-64836273 MS.gene045305:intron 35.0%
ATGAAGCCTGAATTGCTTTA+GGG + chr3.1:64835094-64835113 None:intergenic 35.0%
ATTGATGTTAGATCTGCATC+TGG - chr3.1:64834829-64834848 MS.gene045305:CDS 35.0%
ATTTCCAACAGTCTCATTTG+TGG - chr3.1:64835725-64835744 MS.gene045305:intron 35.0%
ATTTGCATCACTACTTGTGA+AGG - chr3.1:64837532-64837551 MS.gene045305:intron 35.0%
ATTTGTGTTACAAGCAGATC+TGG - chr3.1:64835055-64835074 MS.gene045305:intron 35.0%
CAAATTACAAAGTGAGCATG+AGG + chr3.1:64837517-64837536 None:intergenic 35.0%
CAAGATCTTTACTGCTTAGA+GGG + chr3.1:64837250-64837269 None:intergenic 35.0%
CCAAGCATGAATAACTACAT+GGG - chr3.1:64837996-64838015 MS.gene045305:CDS 35.0%
CCATGTAGTTATTCATGCTT+GGG + chr3.1:64837998-64838017 None:intergenic 35.0%
CTTGATTATGCATGTGTTGT+TGG + chr3.1:64836701-64836720 None:intergenic 35.0%
CTTGTACATTAGGAACCTAA+TGG - chr3.1:64837211-64837230 MS.gene045305:intron 35.0%
GAAAGAAAGTGAAAGCCAAA+GGG + chr3.1:64834986-64835005 None:intergenic 35.0%
TCAAGATCTTTACTGCTTAG+AGG + chr3.1:64837251-64837270 None:intergenic 35.0%
TGTGTACCAAAACCAAACAA+TGG - chr3.1:64835623-64835642 MS.gene045305:intron 35.0%
TTCTTGTTGGACCTTATAGT+GGG + chr3.1:64836456-64836475 None:intergenic 35.0%
TTTCTTGTTGGACCTTATAG+TGG + chr3.1:64836457-64836476 None:intergenic 35.0%
! AAGCAATTCAGGCTTCATTT+TGG - chr3.1:64835096-64835115 MS.gene045305:intron 35.0%
! ACCATTTCTTCGTTTTGCAA+AGG + chr3.1:64834448-64834467 None:intergenic 35.0%
! CTCATAGAGTTTTCCTCTAT+TGG + chr3.1:64834535-64834554 None:intergenic 35.0%
! CTGCTTAATTCCTGCATTTT+TGG + chr3.1:64837053-64837072 None:intergenic 35.0%
! GTTTTTCCCTAAAGCAATTC+AGG - chr3.1:64835085-64835104 MS.gene045305:intron 35.0%
! TACCTTTTGTGTGAATGTCT+TGG - chr3.1:64834773-64834792 MS.gene045305:intron 35.0%
! TGTTTTATCTCTCTCTCTCT+TGG - chr3.1:64835572-64835591 MS.gene045305:intron 35.0%
! TTTACATAGCGAGTCCTTTT+TGG + chr3.1:64836102-64836121 None:intergenic 35.0%
!! AACACACCATTGTTTGGTTT+TGG + chr3.1:64835632-64835651 None:intergenic 35.0%
!! AATCTGAGTGCTGAAGATAT+GGG - chr3.1:64837744-64837763 MS.gene045305:intron 35.0%
!! ACATCTTTTGAGTCTACCTA+GGG - chr3.1:64835275-64835294 MS.gene045305:intron 35.0%
!! AGTGTGTGTTAGCTTGTAAT+TGG + chr3.1:64835248-64835267 None:intergenic 35.0%
!! GATGTGTTGATAGCTAAAAG+AGG + chr3.1:64835009-64835028 None:intergenic 35.0%
!! TACATCTTTTGAGTCTACCT+AGG - chr3.1:64835274-64835293 MS.gene045305:intron 35.0%
!!! ATTTTGGTGCAATTTGGTGT+TGG - chr3.1:64835112-64835131 MS.gene045305:CDS 35.0%
!!! TTTTGGTGCAATTTGGTGTT+GGG - chr3.1:64835113-64835132 MS.gene045305:CDS 35.0%
AAAGTGAAAGCCAAAGGGTT+TGG + chr3.1:64834981-64835000 None:intergenic 40.0%
AACCTAATGGGAGAAGATCT+TGG - chr3.1:64837224-64837243 MS.gene045305:intron 40.0%
AAGTGAAAGCCAAAGGGTTT+GGG + chr3.1:64834980-64834999 None:intergenic 40.0%
ACAGGAATACTTGAAGCTGA+AGG - chr3.1:64837076-64837095 MS.gene045305:intron 40.0%
ACCAACGTTACAAATTGGGT+CGG - chr3.1:64837833-64837852 MS.gene045305:intron 40.0%
AGCATGAATAACTACATGGG+TGG - chr3.1:64837999-64838018 MS.gene045305:CDS 40.0%
AGTGAGGTAGCTCATTTATG+AGG + chr3.1:64835685-64835704 None:intergenic 40.0%
ATATTGTCCACCCCACTATA+AGG - chr3.1:64836442-64836461 MS.gene045305:intron 40.0%
CAAACAGAGCTCTTAGACAA+AGG - chr3.1:64837573-64837592 MS.gene045305:intron 40.0%
CAAATCCACAAGTAGATCCA+TGG + chr3.1:64835655-64835674 None:intergenic 40.0%
CATCATCCAGGTCAAAATCA+GGG - chr3.1:64837777-64837796 MS.gene045305:intron 40.0%
CCCAAGCATGAATAACTACA+TGG - chr3.1:64837995-64838014 MS.gene045305:CDS 40.0%
CCCATGTAGTTATTCATGCT+TGG + chr3.1:64837999-64838018 None:intergenic 40.0%
GAAGCAAATCAGATCCACAA+GGG - chr3.1:64837301-64837320 MS.gene045305:intron 40.0%
GAGGGGAAAAAAGGAATCTA+TGG + chr3.1:64835423-64835442 None:intergenic 40.0%
GCAAATTTCTACCACTAGTG+AGG + chr3.1:64835701-64835720 None:intergenic 40.0%
GCGAACCAACGTTACAAATT+GGG - chr3.1:64837829-64837848 MS.gene045305:intron 40.0%
GGAAAGAAAGTGAAAGCCAA+AGG + chr3.1:64834987-64835006 None:intergenic 40.0%
GTGCTGAAGATATGGGATAT+GGG - chr3.1:64837751-64837770 MS.gene045305:intron 40.0%
TAAATGAGCTACCTCACTAG+TGG - chr3.1:64835687-64835706 MS.gene045305:intron 40.0%
TAGCTGATCCAGCATGAATT+GGG + chr3.1:64837422-64837441 None:intergenic 40.0%
TCAGCTTCAAGTATTCCTGT+TGG + chr3.1:64837076-64837095 None:intergenic 40.0%
TCATCATCCAGGTCAAAATC+AGG - chr3.1:64837776-64837795 MS.gene045305:intron 40.0%
TCTATAGACCCAATTCATGC+TGG - chr3.1:64837411-64837430 MS.gene045305:intron 40.0%
TCTTGTTGGACCTTATAGTG+GGG + chr3.1:64836455-64836474 None:intergenic 40.0%
TGAACCACAAATGAGACTGT+TGG + chr3.1:64835732-64835751 None:intergenic 40.0%
TGAAGCAAATCAGATCCACA+AGG - chr3.1:64837300-64837319 MS.gene045305:intron 40.0%
TGAATAACTACATGGGTGGA+TGG - chr3.1:64838003-64838022 MS.gene045305:CDS 40.0%
TGCGAACCAACGTTACAAAT+TGG - chr3.1:64837828-64837847 MS.gene045305:intron 40.0%
TGTAAAGTTGAGTACCCTTG+TGG + chr3.1:64837318-64837337 None:intergenic 40.0%
TTCTGTTCTTTGTGATGCAG+AGG - chr3.1:64834491-64834510 MS.gene045305:intron 40.0%
! AGTGCTGAAGATATGGGATA+TGG - chr3.1:64837750-64837769 MS.gene045305:intron 40.0%
! ATGAGTTTTGCAGCACTTCA+AGG - chr3.1:64834550-64834569 MS.gene045305:intron 40.0%
! CTCAAAGGAAGCTTTGGTAT+TGG - chr3.1:64835863-64835882 MS.gene045305:intron 40.0%
! GGTGTTGAAATTTGAGGAGT+TGG - chr3.1:64837654-64837673 MS.gene045305:intron 40.0%
! GTTTTGCTTCTCAAGGTTCT+TGG + chr3.1:64836324-64836343 None:intergenic 40.0%
! TGAAGAGAGAGAGCATAATG+AGG + chr3.1:64836539-64836558 None:intergenic 40.0%
!! GAATCTGAGTGCTGAAGATA+TGG - chr3.1:64837743-64837762 MS.gene045305:intron 40.0%
!! GGCTTCATTTTGGTGCAATT+TGG - chr3.1:64835106-64835125 MS.gene045305:CDS 40.0%
!! TGTGGATCTGATTTGCTTCA+AGG + chr3.1:64837300-64837319 None:intergenic 40.0%
!! TTGTTTTTCCCCAAACCCTT+TGG - chr3.1:64834968-64834987 MS.gene045305:CDS 40.0%
AATCTCTACAACGCACTCAG+AGG - chr3.1:64837108-64837127 MS.gene045305:intron 45.0%
ACCGACCCAATTTGTAACGT+TGG + chr3.1:64837837-64837856 None:intergenic 45.0%
AGTGAAAGCCAAAGGGTTTG+GGG + chr3.1:64834979-64834998 None:intergenic 45.0%
CAATTCATGCTGGATCAGCT+AGG - chr3.1:64837421-64837440 MS.gene045305:intron 45.0%
CCAAACAATGGTGTGTTCCA+TGG - chr3.1:64835635-64835654 MS.gene045305:intron 45.0%
CCATGGAACACACCATTGTT+TGG + chr3.1:64835638-64835657 None:intergenic 45.0%
CGCCAAGACATTCACACAAA+AGG + chr3.1:64834778-64834797 None:intergenic 45.0%
CTAGCTGATCCAGCATGAAT+TGG + chr3.1:64837423-64837442 None:intergenic 45.0%
CTCATCGTCTTCTCCAATAG+AGG - chr3.1:64834519-64834538 MS.gene045305:intron 45.0%
CTTCAGCACTCAGATTCAGT+TGG + chr3.1:64837740-64837759 None:intergenic 45.0%
GCTAGGTGATCTTCAACGTA+AGG - chr3.1:64837438-64837457 MS.gene045305:intron 45.0%
GTGTTCCATGGATCTACTTG+TGG - chr3.1:64835647-64835666 MS.gene045305:intron 45.0%
TAACGCCAACATAGCCTACA+AGG - chr3.1:64836579-64836598 MS.gene045305:CDS 45.0%
TCATGCCTTGTAGGCTATGT+TGG + chr3.1:64836587-64836606 None:intergenic 45.0%
TGAGGCTAATGCTCACTCAA+AGG - chr3.1:64835848-64835867 MS.gene045305:intron 45.0%
TGCTCACTCAAAGGAAGCTT+TGG - chr3.1:64835857-64835876 MS.gene045305:intron 45.0%
! TCTTTTTGTATCCCTCCTCG+AGG - chr3.1:64836071-64836090 MS.gene045305:intron 45.0%
! TTTGAGTGAGCATTAGCCTC+AGG + chr3.1:64835849-64835868 None:intergenic 45.0%
!! GAAGGAACACTTGCTATGTG+AGG - chr3.1:64837550-64837569 MS.gene045305:intron 45.0%
!! GCAAGTACTGTGTCTGCTTT+TGG - chr3.1:64835174-64835193 MS.gene045305:CDS 45.0%
!! GGATCTGATTTGCTTCAAGG+AGG + chr3.1:64837297-64837316 None:intergenic 45.0%
!! TGATCACCCTGATTTTGACC+TGG + chr3.1:64837786-64837805 None:intergenic 45.0%
!!! GGGGTTAGTTTTGCTTCTCA+AGG + chr3.1:64836331-64836350 None:intergenic 45.0%
GCAGGAATTAAGCAGCCAAC+AGG - chr3.1:64837058-64837077 MS.gene045305:intron 50.0%
GCATGCTCAAAACGCTTGAG+AGG - chr3.1:64835799-64835818 MS.gene045305:intron 50.0%
GGCCAAGATCTTCTCCCATT+AGG + chr3.1:64837229-64837248 None:intergenic 50.0%
TCCTCGAGGTGGATCCAAAA+AGG - chr3.1:64836085-64836104 MS.gene045305:intron 50.0%
TGCAGATATCAGGCTGATCC+AGG - chr3.1:64837951-64837970 MS.gene045305:CDS 50.0%
! ATGCAACTATGGAGCACCTG+AGG - chr3.1:64835830-64835849 MS.gene045305:intron 50.0%
! TCCTTTTTGGATCCACCTCG+AGG + chr3.1:64836089-64836108 None:intergenic 50.0%
! TGTTGGACCTTATAGTGGGG+TGG + chr3.1:64836452-64836471 None:intergenic 50.0%
! TTTTGGATCCACCTCGAGGA+GGG + chr3.1:64836085-64836104 None:intergenic 50.0%
! TTTTGTATCCCTCCTCGAGG+TGG - chr3.1:64836074-64836093 MS.gene045305:intron 50.0%
! TTTTTGGATCCACCTCGAGG+AGG + chr3.1:64836086-64836105 None:intergenic 50.0%
!! AACGTTGGTTCGCACTCGAT+TGG + chr3.1:64837822-64837841 None:intergenic 50.0%
GGATATGGGCGTCATCATCC+AGG - chr3.1:64837765-64837784 MS.gene045305:intron 55.0%
TCAGGCTGATCCAGGATCAG+TGG - chr3.1:64837959-64837978 MS.gene045305:CDS 55.0%
GCTGTCACCACCACTGATCC+TGG + chr3.1:64837972-64837991 None:intergenic 60.0%
GGCTGATCCAGGATCAGTGG+TGG - chr3.1:64837962-64837981 MS.gene045305:CDS 60.0%
! GGATCAGTGGTGGTGACAGC+AGG - chr3.1:64837972-64837991 MS.gene045305:CDS 60.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 64834387 64838034 64834387 ID=MS.gene045305
chr3.1 mRNA 64834387 64838034 64834387 ID=MS.gene045305.t1;Parent=MS.gene045305
chr3.1 exon 64837850 64838034 64837850 ID=MS.gene045305.t1.exon1;Parent=MS.gene045305.t1
chr3.1 CDS 64837850 64838034 64837850 ID=cds.MS.gene045305.t1;Parent=MS.gene045305.t1
chr3.1 exon 64836537 64836621 64836537 ID=MS.gene045305.t1.exon2;Parent=MS.gene045305.t1
chr3.1 CDS 64836537 64836621 64836537 ID=cds.MS.gene045305.t1;Parent=MS.gene045305.t1
chr3.1 exon 64835292 64835359 64835292 ID=MS.gene045305.t1.exon3;Parent=MS.gene045305.t1
chr3.1 CDS 64835292 64835359 64835292 ID=cds.MS.gene045305.t1;Parent=MS.gene045305.t1
chr3.1 exon 64835099 64835198 64835099 ID=MS.gene045305.t1.exon4;Parent=MS.gene045305.t1
chr3.1 CDS 64835099 64835198 64835099 ID=cds.MS.gene045305.t1;Parent=MS.gene045305.t1
chr3.1 exon 64834962 64835003 64834962 ID=MS.gene045305.t1.exon5;Parent=MS.gene045305.t1
chr3.1 CDS 64834962 64835003 64834962 ID=cds.MS.gene045305.t1;Parent=MS.gene045305.t1
chr3.1 exon 64834826 64834867 64834826 ID=MS.gene045305.t1.exon6;Parent=MS.gene045305.t1
chr3.1 CDS 64834826 64834867 64834826 ID=cds.MS.gene045305.t1;Parent=MS.gene045305.t1
chr3.1 exon 64834571 64834710 64834571 ID=MS.gene045305.t1.exon7;Parent=MS.gene045305.t1
chr3.1 CDS 64834571 64834710 64834571 ID=cds.MS.gene045305.t1;Parent=MS.gene045305.t1
chr3.1 exon 64834387 64834465 64834387 ID=MS.gene045305.t1.exon8;Parent=MS.gene045305.t1
chr3.1 CDS 64834387 64834465 64834387 ID=cds.MS.gene045305.t1;Parent=MS.gene045305.t1
Gene Sequence

>MS.gene045305

ATGGGAAGAGGAAGAGTGGAGTTGAAGAGAATTGAGAACAAGATCAACAGACAAGTTACCTTTGCAAAACGAAGAAATGGTCTTTTGAAAAAAGCTTATGAGCTTTCTGTTCTTTGTGATGCAGAGGTTGCTCTCATCGTCTTCTCCAATAGAGGAAAACTCTATGAGTTTTGCAGCACTTCAAGGTATAATAAATACATATTCATTCAAATGAGAATGATTAATAATTAAATATCAAACAAATATTGACTCTAACTCAACATAGTTAAAGAACATTAATAAACATCTCTACTAAATGCTTTTGATTCTTGTTACAAAATTTGTTTATCTATTTTGTTGTTTATTATATGAAAAAACTGATTTTCTTTTTCCACTGTTTGAGTTTATACCTTTTGTGTGAATGTCTTGGCGTTTATAGAAGGTTGAGTATTTCTGTGAATGCATTGATGTTAGATCTGCATCTGGAAAAACAATTAACCCAAACAAACAAAACATTTATAATATAAAAAAACAAGAAACAACACTGTTGTATTGTATATTCTATCTTGAAGTGTTTGTTTTTTTTCTCTTGTTCTCTAATTTTGTTTTTCCCCAAACCCTTTGGCTTTCACTTTCTTTCCCTCTTTTAGCTATCAACACATCAATCCAAAAATTTCTGGTTTTGCTTCATTTGTGTTACAAGCAGATCTGGTTCAAAAGTTTTTCCCTAAAGCAATTCAGGCTTCATTTTGGTGCAATTTGGTGTTGGGAACATAAACATATCATTAAATTATGTCAAGTTTTAGGAGCAAGTACTGTGTCTGCTTTTGGCTTTAGAAACACTCAGACAACCTAATTCATGTCTCATTTTTCTTTCATCCAATTACAAGCTAACACACACTCTCTTTTACATCTTTTGAGTCTACCTAGGGTTTCTTTTTCTTTTCTTTTCTTTTGTTTCTACAATTAGTTCTTCCTTGTTTTCTAACAATCTTTTCATTTCTTTCTTCTCTTGCCCTCTTGTCTTAATTAAAATTTTCTCTTTTTCAATCTTCCATAGATTCCTTTTTTCCCCTCTATATTATTATATCAACCATTCATTTTTCTTGTTCACATGACTTTATTGAGATTGAGAGTAGATGTTTGATGTTTTCCTTTTCATCATGATTCTTCTAAAGCTATTTACTTATGTAGTAGAGTGTAGAGTGTTTTATCTCTCTCTCTCTTGGAAAACATCTAAGATCTTAAAGATCTAATTGTGTACCAAAACCAAACAATGGTGTGTTCCATGGATCTACTTGTGGATTTGAAAAGTGCCTCATAAATGAGCTACCTCACTAGTGGTAGAAATTTGCATCAATTTCCAACAGTCTCATTTGTGGTTCATTTGATTTTCTGAATGTTTATATATATTATTTTAATGTGAACATGCAGCATGCTCAAAACGCTTGAGAGGTATCAGAAATGCAACTATGGAGCACCTGAGGCTAATGCTCACTCAAAGGAAGCTTTGGTATTGGTGAATAATCTAACTTTGCCTAATTTGATCACAGCAATTTGTTTTTGTTTTTGTTCTTGTTTAGGTTTAGCGTGTTGAATTATAAAACAGTTTTGCCATTGACAAATTTGAATGGAAAATGTTAATTGATAGCTGTTAATTTGTTGGTTAAGAGAGTCAAACTCATGTCATCTTCATCACTCCGAATCTTTTTGTATCCCTCCTCGAGGTGGATCCAAAAAGGACTCGCTATGTAAATGGCTTGAATAAAAATAGAAAAATGAAGGAACATCTAAGAAAAAAAACTAATTCTACAAGTAATTAGGAAGGGAAAAGAAACATATAGAGAGAATGAGATGAGAAGTGAAAAGAACGATCTTCGCATTTATAATGAACTAGAAGTTCGAATGCGGATCCACGACAAGAATAAGAATGTTATTGATTAGAATTGGTTTATCCAAGAACCTTGAGAAGCAAAACTAACCCCAATTCAATCCAATATTCAATATCAAAACTCATGCATTAATTAAATGAAAAATTATCACAACATTATTATTTATAACCTACACAAATGAAGGATATTGTCCACCCCACTATAAGGTCCAACAAGAAAATAAACGATATAAACATTAATACAATTAAAATTCACTAAAGAAATATTAACACATTGGTCCTCATTATGCTCTCTCTCTTCAAGAGAATTTGTCATCAAATTTAACGCCAACATAGCCTACAAGGCATGAAAAACAAAATTAATCGTTCCAATTGGATCAAATAGAAAGTGGTAAATCAGAAAATATAATAAGTAGTTGAATTATAATAGTCTCTTTTCTACCAACAACACATGCATAATCAAGATAAAAACACAAAGTCGCCTTATTTCTCCTAACTTTACATTTTGTCTTAGTTTATCCTAGATTTGACCTTTTCTATGAAGAAGGTATACACGTATTATCAATTGATAGTGCCAATATTATGAATATATTCACTAAGATTTTGGACATTTACGATGAATATGCATTGATGATATGTTTTTGATACAGTAGACAAAAATTTATAACTTCAAATATCTACCTTTAATTATATAAGAATTAGTAAGATGCAACGTTTTTTCTACCAAAAATTTATAACTTCAAATATCTACCTTTAATTATATAAGAATTAGTAAGATGCAACGTTTTTTCTACCAAAAATGCAGGAATTAAGCAGCCAACAGGAATACTTGAAGCTGAAGGCACGTTATGAATCTCTACAACGCACTCAGAGGTACCGATCGATACTTGATCATATATACTTCTATAATCAAGTACATGATTGTAGAAATTAATGAGCCAATGAAGTATTTGACTTGTACATTAGGAACCTAATGGGAGAAGATCTTGGCCCTCTAAGCAGTAAAGATCTTGAAACACTTGAAAGGCAGCTAGATTCCTCCTTGAAGCAAATCAGATCCACAAGGGTACTCAACTTTACAACAATGCCTTTTTTGTCTATACATTTTTTGTCTCGGTATGTGCTGAGTAACATTTTTTGGAACTATTTTTTATTCTATAGACCCAATTCATGCTGGATCAGCTAGGTGATCTTCAACGTAAGGTATGATGAGAAAAATCTAGCTTTCTTTCCCTTTATCATGTTTGCTATCATATTCCTCATGCTCACTTTGTAATTTGCATCACTACTTGTGAAGGAACACTTGCTATGTGAGGCAAACAGAGCTCTTAGACAAAGGGTAATAATAAAAATTATCATGATAATTTAAGAACTATATACTATATATACATACATATGGTGTTGAAATTTGAGGAGTTGGTTAATGATAGTGATTTGTGATGTTTTTGTTTCAGATGGAAGGGTATCAAATAAATTCACTCCAACTGAATCTGAGTGCTGAAGATATGGGATATGGGCGTCATCATCCAGGTCAAAATCAGGGTGATCATGATGTATTTCAACCAATCGAGTGCGAACCAACGTTACAAATTGGGTCGGTGTTGTTTAGTACTCTTCATTCATTAAAAAATGAATCATATGTTTAAGATTTTAGCTGTATATTTTTGACATAGAATTTAATTTGTTTAAGCTTATGCAGATATCAGGCTGATCCAGGATCAGTGGTGGTGACAGCAGGCCCAAGCATGAATAACTACATGGGTGGATGGTTACCATGA
Protein sequence

>MS.gene045305.t1

MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCSTSSMLKTLERYQKCNYGAPEANAHSKEALVLELSSQQEYLKLKARYESLQRTQRNLMGEDLGPLSSKDLETLERQLDSSLKQIRSTRTQFMLDQLGDLQRKEHLLCEANRALRQRMEGYQINSLQLNLSAEDMGYGRHHPGQNQGDHDVFQPIECEPTLQIGYQADPGSVVVTAGPSMNNYMGGWLP