AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene04545

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene04545.t1 MTR_3g463400 94.690 452 16 3 1 445 1 451 0.0 877
MS.gene04545.t1 MTR_5g070020 48.780 410 139 15 5 409 11 354 5.17e-110 328
MS.gene04545.t1 MTR_3g077650 42.647 272 113 7 28 283 90 334 1.27e-59 201
MS.gene04545.t1 MTR_4g105660 65.649 131 40 1 132 262 178 303 3.53e-57 194
MS.gene04545.t1 MTR_5g049190 48.500 200 81 4 132 322 17 203 6.21e-56 186
MS.gene04545.t1 MTR_4g088015 58.108 148 57 2 132 279 219 361 7.12e-55 189
MS.gene04545.t1 MTR_7g451170 57.823 147 55 2 133 278 190 330 7.39e-53 182
MS.gene04545.t1 MTR_7g037260 56.934 137 54 2 130 266 141 272 6.55e-52 179
MS.gene04545.t1 MTR_7g037130 53.285 137 59 2 130 266 141 272 3.44e-46 164
MS.gene04545.t1 MTR_7g035350 35.385 260 139 4 17 266 113 353 3.67e-46 166
MS.gene04545.t1 MTR_1g057980 54.135 133 57 1 134 266 80 208 8.81e-45 158
MS.gene04545.t1 MTR_7g450950 51.515 132 61 1 133 264 156 284 3.29e-41 150
MS.gene04545.t1 MTR_7g061330 60.714 112 44 0 123 234 102 213 1.02e-40 153
MS.gene04545.t1 MTR_7g461410 60.714 112 44 0 123 234 102 213 1.02e-40 153
MS.gene04545.t1 MTR_7g061330 44.390 205 108 4 123 322 66 269 1.07e-40 152
MS.gene04545.t1 MTR_3g110028 56.250 112 49 0 123 234 74 185 2.12e-38 149
MS.gene04545.t1 MTR_1g026870 54.464 112 51 0 123 234 74 185 1.84e-37 146
MS.gene04545.t1 MTR_5g010650 41.667 180 80 4 70 228 29 204 1.25e-36 140
MS.gene04545.t1 MTR_4g019370 52.941 102 48 0 133 234 37 138 4.95e-34 130
MS.gene04545.t1 MTR_4g094982 50.000 104 52 0 133 236 4 107 1.67e-31 122
MS.gene04545.t1 MTR_3g101290 50.000 102 51 0 133 234 36 137 5.90e-31 119
MS.gene04545.t1 MTR_6g009430 43.056 144 76 4 123 263 3 143 1.40e-30 120
MS.gene04545.t1 MTR_5g016510 48.077 104 54 0 133 236 4 107 1.99e-30 120
MS.gene04545.t1 MTR_1g085040 44.203 138 71 4 132 267 12 145 3.38e-30 120
MS.gene04545.t1 MTR_4g082040 50.000 112 53 1 134 242 105 216 5.22e-30 121
MS.gene04545.t1 MTR_6g027360 49.515 103 52 0 132 234 76 178 1.18e-29 117
MS.gene04545.t1 MTR_8g017440 49.515 103 49 2 134 234 14 115 1.27e-29 118
MS.gene04545.t1 MTR_5g041570 46.400 125 64 1 121 242 121 245 1.54e-29 120
MS.gene04545.t1 MTR_6g027340 48.515 101 52 0 134 234 16 116 1.99e-29 114
MS.gene04545.t1 MTR_8g017540 50.485 103 48 2 134 234 60 161 2.12e-29 119
MS.gene04545.t1 MTR_2g089450 35.981 214 118 7 132 336 12 215 2.29e-29 115
MS.gene04545.t1 MTR_0008s0390 41.606 137 75 3 120 252 1 136 2.51e-29 115
MS.gene04545.t1 MTR_6g074860 51.000 100 49 0 134 233 4 103 3.04e-29 115
MS.gene04545.t1 MTR_7g110830 38.462 182 100 6 132 306 12 188 3.47e-29 117
MS.gene04545.t1 MTR_7g086960 39.634 164 89 2 134 293 89 246 4.02e-29 117
MS.gene04545.t1 MTR_1g085640 37.173 191 94 5 132 299 12 199 4.48e-29 117
MS.gene04545.t1 MTR_8g017500 49.515 103 49 2 134 234 14 115 7.61e-29 116
MS.gene04545.t1 MTR_2g011660 43.966 116 64 1 120 234 1 116 1.02e-28 115
MS.gene04545.t1 MTR_5g010020 48.454 97 49 1 134 229 14 110 1.14e-28 115
MS.gene04545.t1 MTR_5g082910 47.959 98 51 0 133 230 18 115 1.41e-28 114
MS.gene04545.t1 MTR_3g089045 50.435 115 54 1 131 242 13 127 1.69e-28 114
MS.gene04545.t1 MTR_5g029840 42.241 116 65 2 120 234 1 115 1.93e-28 115
MS.gene04545.t1 MTR_4g091490 44.444 117 62 2 120 234 1 116 2.11e-28 115
MS.gene04545.t1 MTR_3g065440 32.701 211 135 5 120 328 1 206 2.48e-28 114
MS.gene04545.t1 MTR_2g089420 47.368 114 56 3 132 242 11 123 3.36e-28 116
MS.gene04545.t1 MTR_3g077110 47.619 105 52 2 132 234 12 115 3.49e-28 114
MS.gene04545.t1 MTR_2g099740 47.573 103 51 2 134 234 14 115 4.15e-28 115
MS.gene04545.t1 MTR_4g073420 38.690 168 91 5 134 290 14 180 4.24e-28 112
MS.gene04545.t1 MTR_7g111290 51.515 99 45 2 132 228 12 109 5.11e-28 114
MS.gene04545.t1 MTR_1g112760 47.619 105 52 2 132 234 13 116 6.37e-28 110
MS.gene04545.t1 MTR_2g097910 45.378 119 61 3 132 247 20 137 9.34e-28 112
MS.gene04545.t1 MTR_8g017390 49.038 104 49 3 134 234 14 116 1.01e-27 115
MS.gene04545.t1 MTR_2g064160 45.631 103 53 2 134 234 13 114 1.03e-27 112
MS.gene04545.t1 MTR_6g027370 48.039 102 53 0 133 234 98 199 1.03e-27 113
MS.gene04545.t1 MTR_4g065017 44.915 118 63 2 132 247 17 134 1.19e-27 112
MS.gene04545.t1 MTR_5g078140 47.009 117 58 3 120 234 1 115 1.41e-27 112
MS.gene04545.t1 MTR_0251s0050 42.735 117 64 2 120 234 1 116 1.50e-27 111
MS.gene04545.t1 MTR_3g028740 42.735 117 66 1 119 234 9 125 1.52e-27 112
MS.gene04545.t1 MTR_3g074520 46.154 117 59 3 120 234 1 115 2.07e-27 112
MS.gene04545.t1 MTR_4g105130 45.192 104 56 1 132 234 12 115 2.11e-27 112
MS.gene04545.t1 MTR_8g017340 49.038 104 49 3 134 234 14 116 2.21e-27 114
MS.gene04545.t1 MTR_4g100720 48.454 97 49 1 134 229 15 111 2.46e-27 107
MS.gene04545.t1 MTR_4g478180 44.915 118 61 3 119 234 1 116 2.71e-27 112
MS.gene04545.t1 MTR_3g461490 42.647 136 74 3 134 268 14 146 2.92e-27 111
MS.gene04545.t1 MTR_8g095390 44.340 106 57 2 134 237 14 119 3.09e-27 111
MS.gene04545.t1 MTR_8g031360 44.444 117 63 1 120 234 1 117 3.35e-27 110
MS.gene04545.t1 MTR_4g102380 44.444 117 61 3 120 234 1 115 3.95e-27 110
MS.gene04545.t1 MTR_5g079670 46.602 103 52 2 134 234 13 114 4.17e-27 108
MS.gene04545.t1 MTR_0008s0470 41.026 117 66 2 120 234 1 116 4.66e-27 110
MS.gene04545.t1 MTR_3g052450 48.571 105 52 2 132 234 40 144 6.72e-27 113
MS.gene04545.t1 MTR_7g011170 45.299 117 60 3 120 234 1 115 9.95e-27 109
MS.gene04545.t1 MTR_8g017350 48.077 104 50 3 134 234 14 116 1.16e-26 113
MS.gene04545.t1 MTR_3g097450 36.585 164 79 5 134 294 14 155 1.24e-26 109
MS.gene04545.t1 MTR_8g027345 41.353 133 76 2 120 251 1 132 1.33e-26 109
MS.gene04545.t1 MTR_3g052430 48.571 105 52 2 132 234 41 145 1.55e-26 112
MS.gene04545.t1 MTR_8g098860 43.137 102 57 1 134 234 14 115 1.87e-26 109
MS.gene04545.t1 MTR_4g063100 46.296 108 55 2 134 239 9 115 2.00e-26 107
MS.gene04545.t1 MTR_4g485530 41.228 114 66 1 122 234 2 115 2.08e-26 105
MS.gene04545.t1 MTR_4g082230 42.017 119 67 2 120 237 1 118 2.88e-26 110
MS.gene04545.t1 MTR_4g082290 42.017 119 67 2 120 237 1 118 2.96e-26 110
MS.gene04545.t1 MTR_6g015455 44.231 104 58 0 133 236 4 107 2.98e-26 112
MS.gene04545.t1 MTR_2g089620 43.966 116 63 2 120 234 1 115 4.75e-26 108
MS.gene04545.t1 MTR_5g007370 44.762 105 55 2 132 234 12 115 1.04e-25 106
MS.gene04545.t1 MTR_3g011610 48.571 105 50 3 132 233 37 140 1.49e-25 109
MS.gene04545.t1 MTR_1g043050 35.354 198 99 7 132 317 12 192 1.93e-25 104
MS.gene04545.t1 MTR_4g029540 50.000 102 49 2 134 233 12 113 2.62e-25 105
MS.gene04545.t1 MTR_1g073170 46.429 112 52 3 134 243 22 127 2.97e-25 104
MS.gene04545.t1 MTR_4g125520 44.144 111 60 2 120 229 1 110 3.04e-25 105
MS.gene04545.t1 MTR_8g042410 46.226 106 54 2 132 235 37 141 3.38e-25 108
MS.gene04545.t1 MTR_0197s0010 50.526 95 44 2 137 229 6 99 5.43e-25 102
MS.gene04545.t1 MTR_5g042030 41.818 110 63 1 129 237 4 113 5.48e-25 104
MS.gene04545.t1 MTR_8g020490 48.148 108 50 2 122 228 3 105 6.74e-25 103
MS.gene04545.t1 MTR_7g076740 43.590 117 63 2 120 234 1 116 7.20e-25 104
MS.gene04545.t1 MTR_2g096380 34.591 159 93 3 134 290 8 157 8.14e-25 102
MS.gene04545.t1 MTR_7g096930 40.288 139 70 4 120 247 1 137 9.51e-25 103
MS.gene04545.t1 MTR_7g115650 31.863 204 113 5 134 328 14 200 1.20e-24 101
MS.gene04545.t1 MTR_7g117730 44.144 111 60 2 120 229 1 110 1.27e-24 102
MS.gene04545.t1 MTR_1g045610 42.400 125 64 3 134 256 23 141 1.34e-24 102
MS.gene04545.t1 MTR_1g021230 46.667 105 53 2 132 234 57 160 1.39e-24 105
MS.gene04545.t1 MTR_1g100653 45.133 113 58 3 134 243 14 125 1.58e-24 103
MS.gene04545.t1 MTR_2g034790 43.966 116 63 2 120 234 1 115 1.82e-24 103
MS.gene04545.t1 MTR_6g012690 42.241 116 65 2 120 234 1 115 2.57e-24 103
MS.gene04545.t1 MTR_5g078910 43.810 105 58 1 131 234 6 110 3.81e-24 102
MS.gene04545.t1 MTR_8g006470 49.020 102 50 2 134 233 12 113 3.94e-24 102
MS.gene04545.t1 MTR_5g079120 41.129 124 69 2 115 234 41 164 7.39e-24 101
MS.gene04545.t1 MTR_1g062940 47.959 98 48 2 132 227 6 102 7.66e-24 99.4
MS.gene04545.t1 MTR_4g121460 42.735 117 63 3 120 234 1 115 9.75e-24 102
MS.gene04545.t1 MTR_0140s0030 36.090 133 84 1 123 254 4 136 1.03e-23 101
MS.gene04545.t1 MTR_0489s0020 36.090 133 84 1 123 254 4 136 1.03e-23 101
MS.gene04545.t1 MTR_5g079290 42.453 106 60 1 134 238 19 124 1.47e-23 99.8
MS.gene04545.t1 MTR_0001s0360 45.833 96 51 1 134 228 9 104 2.15e-23 99.0
MS.gene04545.t1 MTR_3g083540 43.689 103 57 1 127 228 36 138 2.52e-23 100
MS.gene04545.t1 MTR_1g083630 44.860 107 58 1 129 234 9 115 2.53e-23 103
MS.gene04545.t1 MTR_1g110460 41.346 104 60 1 132 234 26 129 3.02e-23 100
MS.gene04545.t1 MTR_7g010210 39.516 124 69 2 123 245 3 121 3.92e-23 100
MS.gene04545.t1 MTR_5g079220 40.000 115 68 1 125 238 14 128 4.21e-23 99.0
MS.gene04545.t1 MTR_7g035075 40.179 112 66 1 134 244 16 127 5.14e-23 97.1
MS.gene04545.t1 MTR_5g088640 45.631 103 52 3 134 233 14 115 6.48e-23 98.2
MS.gene04545.t1 MTR_7g010210 39.516 124 69 2 123 245 3 121 6.70e-23 98.2
MS.gene04545.t1 MTR_5g062790 44.248 113 59 3 128 237 5 116 7.28e-23 98.6
MS.gene04545.t1 MTR_5g088080 45.631 103 52 3 134 233 14 115 7.49e-23 97.8
MS.gene04545.t1 MTR_5g088150 45.631 103 52 3 134 233 14 115 7.49e-23 97.8
MS.gene04545.t1 MTR_5g488210 45.631 103 52 3 134 233 14 115 7.49e-23 97.8
MS.gene04545.t1 MTR_1g076150 37.405 131 79 2 123 251 3 132 7.89e-23 97.8
MS.gene04545.t1 MTR_6g055910 38.211 123 75 1 124 245 6 128 1.27e-22 97.8
MS.gene04545.t1 MTR_5g488170 45.631 103 52 3 134 233 14 115 1.33e-22 96.7
MS.gene04545.t1 MTR_4g097570 38.760 129 75 3 120 245 1 128 1.52e-22 97.8
MS.gene04545.t1 MTR_1g100667 40.952 105 61 1 134 237 15 119 1.89e-22 97.1
MS.gene04545.t1 MTR_7g017260 45.455 99 51 1 134 229 27 125 1.90e-22 97.1
MS.gene04545.t1 MTR_3g039990 38.938 113 68 1 123 234 4 116 2.74e-22 97.4
MS.gene04545.t1 MTR_2g095520 41.964 112 62 3 120 229 1 111 4.28e-22 97.1
MS.gene04545.t1 MTR_0008s0280 41.837 98 54 2 134 229 14 110 4.82e-22 94.7
MS.gene04545.t1 MTR_0247s0040 44.000 100 55 1 134 232 9 108 5.12e-22 93.2
MS.gene04545.t1 MTR_5g014990 32.105 190 116 5 120 298 1 188 5.28e-22 96.3
MS.gene04545.t1 MTR_6g006030 46.875 96 48 2 134 227 16 110 7.10e-22 93.6
MS.gene04545.t1 MTR_0063s0090 40.816 98 55 2 134 229 14 110 7.87e-22 94.0
MS.gene04545.t1 MTR_1g017140 39.231 130 74 4 120 245 1 129 8.87e-22 96.3
MS.gene04545.t1 MTR_5g078950 41.000 100 58 1 134 232 9 108 9.00e-22 94.7
MS.gene04545.t1 MTR_1g043080 42.857 105 57 2 132 234 12 115 1.04e-21 94.4
MS.gene04545.t1 MTR_6g012180 40.187 107 63 1 123 228 3 109 1.04e-21 95.9
MS.gene04545.t1 MTR_4g097570 38.281 128 76 3 120 245 1 127 1.13e-21 95.1
MS.gene04545.t1 MTR_5g078800 42.308 104 59 1 132 234 7 110 1.42e-21 94.4
MS.gene04545.t1 MTR_4g057635 40.171 117 67 3 120 234 1 116 1.63e-21 95.1
MS.gene04545.t1 MTR_5g088610 43.636 110 58 3 128 234 5 113 1.83e-21 95.5
MS.gene04545.t1 MTR_5g078860 41.346 104 60 1 132 234 7 110 2.19e-21 94.7
MS.gene04545.t1 MTR_1g086530 34.028 144 89 3 134 275 35 174 2.92e-21 93.6
MS.gene04545.t1 MTR_3g103570 39.370 127 73 4 120 244 1 125 3.42e-21 94.7
MS.gene04545.t1 MTR_2g067420 40.909 110 63 2 121 229 4 112 3.53e-21 94.4
MS.gene04545.t1 MTR_5g038910 41.837 98 57 0 137 234 29 126 3.67e-21 95.9
MS.gene04545.t1 MTR_1g008970 40.602 133 52 2 97 229 81 186 3.81e-21 92.8
MS.gene04545.t1 MTR_7g087130 37.168 113 70 1 123 234 3 115 8.06e-21 93.6
MS.gene04545.t1 MTR_5g038910 41.837 98 57 0 137 234 29 126 8.70e-21 94.0
MS.gene04545.t1 MTR_1g017000 38.835 103 61 2 134 234 14 116 1.06e-20 91.7
MS.gene04545.t1 MTR_2g088170 50.000 106 49 3 132 234 29 133 1.07e-20 94.7
MS.gene04545.t1 MTR_7g061550 31.892 185 114 4 134 312 7 185 1.65e-20 92.8
MS.gene04545.t1 MTR_7g111290 56.452 62 27 0 167 228 6 67 1.94e-20 92.4
MS.gene04545.t1 MTR_0193s0090 36.646 161 98 4 134 292 9 167 2.36e-20 89.4
MS.gene04545.t1 MTR_8g060940 43.158 95 53 1 134 227 9 103 3.29e-20 89.7
MS.gene04545.t1 MTR_5g078930 42.342 111 62 2 134 242 11 121 3.72e-20 89.0
MS.gene04545.t1 MTR_7g102110 36.486 148 83 6 120 261 1 143 3.81e-20 90.5
MS.gene04545.t1 MTR_8g468380 38.776 98 60 0 137 234 25 122 4.07e-20 92.8
MS.gene04545.t1 MTR_6g090405 37.607 117 70 3 120 234 1 116 4.45e-20 89.7
MS.gene04545.t1 MTR_4g128190 42.056 107 49 3 132 237 11 105 5.35e-20 89.4
MS.gene04545.t1 MTR_1g086510 39.252 107 64 1 134 239 23 129 4.11e-19 87.0
MS.gene04545.t1 MTR_4g128670 40.179 112 64 3 120 229 1 111 5.10e-19 88.6
MS.gene04545.t1 MTR_4g063100 46.575 73 39 0 167 239 14 86 1.09e-18 85.1
MS.gene04545.t1 MTR_2g033170 41.414 99 57 1 130 227 22 120 3.54e-18 85.5
MS.gene04545.t1 MTR_6g055910 41.772 79 46 0 167 245 21 99 5.92e-18 83.6
MS.gene04545.t1 MTR_3g045430 36.923 130 77 4 131 258 11 137 8.76e-18 84.0
MS.gene04545.t1 MTR_7g109320 44.444 117 61 3 120 234 1 115 1.13e-17 84.3
MS.gene04545.t1 MTR_7g035300 37.963 108 59 3 170 276 101 201 1.15e-17 82.4
MS.gene04545.t1 MTR_2g096380 41.975 81 47 0 167 247 23 103 5.37e-17 80.1
MS.gene04545.t1 MTR_4g123040 41.237 97 56 1 132 227 24 120 7.84e-17 81.6
MS.gene04545.t1 MTR_5g007300 40.260 77 45 1 132 207 64 140 1.96e-14 70.5
MS.gene04545.t1 MTR_1g085880 40.566 106 60 3 132 234 11 116 4.39e-14 71.2
MS.gene04545.t1 MTR_1g085770 40.000 100 58 2 137 234 17 116 1.26e-13 71.6
MS.gene04545.t1 MTR_6g080360 37.113 97 60 1 131 227 476 571 2.08e-13 73.2
MS.gene04545.t1 MTR_6g080360 37.234 94 58 1 134 227 530 622 9.36e-12 67.8
MS.gene04545.t1 MTR_6g080360 37.113 97 60 1 131 227 256 351 5.03e-13 71.6
MS.gene04545.t1 MTR_6g080360 37.234 94 58 1 134 227 310 402 2.10e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene04545.t1 AT5G11050 39.294 453 186 13 23 442 16 412 3.03e-83 262
MS.gene04545.t1 AT5G58850 37.885 454 203 13 23 442 11 419 7.31e-77 246
MS.gene04545.t1 AT4G18770 66.667 138 41 1 125 262 208 340 7.06e-60 202
MS.gene04545.t1 AT3G27785 60.135 148 46 2 122 263 177 317 1.76e-54 187
MS.gene04545.t1 AT5G40360 54.615 130 56 1 134 263 158 284 1.62e-47 167
MS.gene04545.t1 AT3G09370 47.399 173 80 3 123 290 132 298 5.81e-41 153
MS.gene04545.t1 AT3G09370 47.368 171 79 3 125 290 126 290 7.08e-41 152
MS.gene04545.t1 AT3G09370 47.368 171 79 3 125 290 121 285 7.21e-41 152
MS.gene04545.t1 AT5G02320 60.909 110 43 0 125 234 118 227 9.50e-41 153
MS.gene04545.t1 AT5G02320 60.909 110 43 0 125 234 118 227 9.50e-41 153
MS.gene04545.t1 AT5G02320 60.714 112 44 0 123 234 56 167 1.17e-40 152
MS.gene04545.t1 AT2G25230 46.667 150 72 3 115 263 8 150 2.46e-38 139
MS.gene04545.t1 AT5G11510 52.679 112 53 0 123 234 70 181 8.03e-37 144
MS.gene04545.t1 AT5G11510 52.679 112 53 0 123 234 70 181 8.03e-37 144
MS.gene04545.t1 AT5G11510 52.679 112 53 0 123 234 70 181 8.03e-37 144
MS.gene04545.t1 AT5G11510 52.679 112 53 0 123 234 70 181 8.49e-37 144
MS.gene04545.t1 AT5G11510 52.679 112 53 0 123 234 70 181 8.94e-37 144
MS.gene04545.t1 AT4G32730 51.818 110 53 0 125 234 78 187 6.82e-36 141
MS.gene04545.t1 AT4G32730 51.818 110 53 0 125 234 78 187 6.82e-36 141
MS.gene04545.t1 AT4G32730 51.818 110 53 0 125 234 78 187 6.82e-36 141
MS.gene04545.t1 AT4G32730 51.818 110 53 0 125 234 78 187 6.82e-36 141
MS.gene04545.t1 AT4G32730 51.786 112 54 0 123 234 76 187 7.39e-36 141
MS.gene04545.t1 AT5G40430 44.604 139 71 3 125 263 45 177 2.91e-35 131
MS.gene04545.t1 AT3G55730 53.846 104 48 0 131 234 53 156 2.95e-32 127
MS.gene04545.t1 AT3G28470 37.500 208 118 6 123 322 3 206 8.81e-32 124
MS.gene04545.t1 AT1G17950 35.829 187 112 3 134 318 5 185 4.96e-31 120
MS.gene04545.t1 AT4G00540 55.357 112 47 1 126 234 95 206 6.37e-31 123
MS.gene04545.t1 AT1G69560 43.885 139 75 1 115 250 104 242 1.27e-30 121
MS.gene04545.t1 AT1G69560 43.885 139 75 1 115 250 88 226 1.48e-30 120
MS.gene04545.t1 AT4G00540 55.357 112 47 1 126 234 93 204 1.64e-30 122
MS.gene04545.t1 AT1G09540 37.356 174 105 3 132 303 12 183 3.37e-30 120
MS.gene04545.t1 AT3G09230 50.980 102 50 0 133 234 54 155 4.33e-30 120
MS.gene04545.t1 AT1G26780 31.154 260 148 5 132 386 96 329 8.02e-30 119
MS.gene04545.t1 AT1G66230 37.438 203 118 7 120 318 1 198 1.55e-29 117
MS.gene04545.t1 AT5G26660 48.276 116 56 3 132 245 12 125 1.76e-29 118
MS.gene04545.t1 AT3G50060 46.154 104 56 0 133 236 5 108 3.61e-29 116
MS.gene04545.t1 AT1G57560 49.524 105 50 2 132 234 12 115 6.34e-29 115
MS.gene04545.t1 AT1G57560 49.524 105 50 2 132 234 12 115 6.48e-29 115
MS.gene04545.t1 AT1G26780 48.246 114 56 1 132 242 96 209 9.16e-29 114
MS.gene04545.t1 AT2G39880 49.038 104 53 0 131 234 47 150 9.97e-29 116
MS.gene04545.t1 AT5G67300 47.059 102 54 0 133 234 5 106 1.15e-28 115
MS.gene04545.t1 AT3G12720 46.602 103 52 2 134 234 24 125 1.55e-28 114
MS.gene04545.t1 AT3G11440 43.077 130 66 3 109 236 24 147 1.61e-28 117
MS.gene04545.t1 AT4G37260 47.115 104 55 0 133 236 12 115 1.63e-28 115
MS.gene04545.t1 AT4G33450 49.074 108 52 1 131 235 16 123 2.35e-28 112
MS.gene04545.t1 AT1G63910 42.623 122 64 2 134 254 14 130 2.40e-28 115
MS.gene04545.t1 AT3G29020 43.333 120 68 0 134 253 65 184 3.61e-28 112
MS.gene04545.t1 AT1G18570 43.750 128 70 2 122 248 3 129 5.38e-28 114
MS.gene04545.t1 AT3G13890 45.098 102 55 1 134 234 14 115 5.53e-28 114
MS.gene04545.t1 AT3G11440 43.077 130 66 3 109 236 24 147 5.80e-28 116
MS.gene04545.t1 AT3G11440 43.077 130 66 3 109 236 24 147 5.80e-28 116
MS.gene04545.t1 AT3G11440 43.077 130 66 3 109 236 24 147 5.80e-28 116
MS.gene04545.t1 AT4G26930 42.975 121 57 2 114 233 12 121 6.13e-28 114
MS.gene04545.t1 AT4G01680 46.154 104 55 1 132 234 12 115 6.87e-28 113
MS.gene04545.t1 AT4G28110 46.667 105 55 1 134 237 14 118 7.53e-28 112
MS.gene04545.t1 AT4G05100 43.966 116 64 1 120 234 1 116 8.11e-28 113
MS.gene04545.t1 AT4G01680 46.154 104 55 1 132 234 12 115 1.06e-27 110
MS.gene04545.t1 AT2G23290 47.115 104 55 0 133 236 12 115 1.22e-27 112
MS.gene04545.t1 AT3G29020 43.333 120 68 0 134 253 67 186 1.26e-27 112
MS.gene04545.t1 AT4G12350 44.444 117 61 3 120 234 1 115 1.61e-27 111
MS.gene04545.t1 AT5G35550 41.353 133 71 2 113 244 1 127 3.22e-27 110
MS.gene04545.t1 AT3G13890 42.342 111 54 2 134 234 14 124 3.52e-27 112
MS.gene04545.t1 AT1G74430 40.625 128 74 2 131 257 11 137 4.01e-27 110
MS.gene04545.t1 AT5G14750 48.454 97 49 1 134 229 18 114 4.04e-27 108
MS.gene04545.t1 AT5G16770 43.103 116 64 2 120 234 1 115 4.19e-27 111
MS.gene04545.t1 AT5G16770 43.103 116 64 2 120 234 1 115 4.19e-27 111
MS.gene04545.t1 AT4G21440 46.154 104 55 1 132 234 12 115 4.83e-27 111
MS.gene04545.t1 AT5G16770 43.103 116 64 2 120 234 1 115 6.05e-27 110
MS.gene04545.t1 AT5G16770 43.103 116 64 2 120 234 1 115 6.05e-27 110
MS.gene04545.t1 AT5G06100 47.222 108 55 2 131 236 31 138 8.37e-27 112
MS.gene04545.t1 AT4G22680 35.437 206 125 5 120 323 1 200 9.13e-27 108
MS.gene04545.t1 AT4G38620 46.602 103 52 2 134 234 14 115 9.14e-27 109
MS.gene04545.t1 AT4G01680 43.103 116 53 2 132 234 12 127 1.04e-26 110
MS.gene04545.t1 AT5G17800 45.217 115 61 1 134 246 93 207 1.07e-26 110
MS.gene04545.t1 AT5G10280 44.444 117 61 3 120 234 1 115 1.58e-26 109
MS.gene04545.t1 AT3G02940 43.103 116 64 2 120 234 1 115 1.87e-26 108
MS.gene04545.t1 AT5G06100 47.222 108 55 2 131 236 31 138 1.97e-26 112
MS.gene04545.t1 AT5G06100 47.222 108 55 2 131 236 31 138 1.97e-26 112
MS.gene04545.t1 AT5G06100 47.222 108 55 2 131 236 31 138 1.97e-26 112
MS.gene04545.t1 AT5G06100 47.222 108 55 2 131 236 31 138 1.97e-26 112
MS.gene04545.t1 AT3G61250 44.444 117 61 3 120 234 1 115 2.50e-26 108
MS.gene04545.t1 AT5G12870 46.078 102 54 1 134 234 20 121 2.55e-26 107
MS.gene04545.t1 AT5G65230 44.444 117 61 3 120 234 1 115 2.56e-26 108
MS.gene04545.t1 AT3G02940 43.103 116 64 2 120 234 1 115 2.85e-26 108
MS.gene04545.t1 AT3G02940 43.103 116 64 2 120 234 1 115 2.85e-26 108
MS.gene04545.t1 AT5G40330 32.961 179 98 3 134 311 14 171 2.91e-26 106
MS.gene04545.t1 AT1G35515 34.810 158 94 3 134 282 14 171 3.06e-26 105
MS.gene04545.t1 AT5G15310 45.455 110 58 2 120 228 1 109 3.48e-26 106
MS.gene04545.t1 AT5G15310 43.103 116 64 2 120 234 1 115 3.49e-26 108
MS.gene04545.t1 AT3G08500 47.115 104 54 1 132 234 30 133 3.76e-26 108
MS.gene04545.t1 AT3G53200 32.995 197 118 4 131 320 8 197 4.04e-26 106
MS.gene04545.t1 AT5G15310 43.103 116 64 2 120 234 1 115 4.16e-26 108
MS.gene04545.t1 AT1G73410 50.467 107 50 1 134 237 6 112 5.15e-26 106
MS.gene04545.t1 AT5G14340 41.606 137 73 5 120 254 13 144 6.54e-26 106
MS.gene04545.t1 AT2G26960 45.192 104 56 1 131 233 19 122 6.55e-26 109
MS.gene04545.t1 AT1G74080 48.980 98 49 1 132 228 12 109 7.08e-26 107
MS.gene04545.t1 AT5G55020 44.660 103 56 1 132 233 26 128 7.29e-26 110
MS.gene04545.t1 AT1G73410 50.467 107 50 1 134 237 6 112 7.88e-26 104
MS.gene04545.t1 AT3G01140 43.103 116 64 2 120 234 1 115 9.54e-26 107
MS.gene04545.t1 AT2G32460 47.170 106 52 3 132 234 18 122 1.25e-25 109
MS.gene04545.t1 AT5G56110 42.647 136 74 3 134 268 14 146 1.28e-25 107
MS.gene04545.t1 AT2G32460 47.170 106 52 3 132 234 6 110 1.33e-25 109
MS.gene04545.t1 AT4G09460 30.769 182 115 3 134 305 14 194 1.57e-25 104
MS.gene04545.t1 AT3G27920 46.875 96 50 1 134 228 16 111 1.68e-25 104
MS.gene04545.t1 AT4G17785 42.735 117 64 2 120 234 1 116 1.75e-25 107
MS.gene04545.t1 AT1G22640 44.660 103 54 2 134 234 14 115 1.85e-25 105
MS.gene04545.t1 AT4G17785 42.735 117 64 2 120 234 1 116 1.87e-25 107
MS.gene04545.t1 AT1G06180 32.864 213 115 8 120 325 1 192 2.43e-25 104
MS.gene04545.t1 AT3G23250 33.171 205 118 6 120 321 1 189 3.06e-25 105
MS.gene04545.t1 AT3G24310 43.200 125 63 3 134 256 20 138 3.46e-25 104
MS.gene04545.t1 AT5G16600 44.531 128 66 4 120 245 1 125 3.47e-25 105
MS.gene04545.t1 AT5G54230 43.810 105 58 1 134 237 14 118 3.77e-25 105
MS.gene04545.t1 AT3G13540 40.833 120 69 2 127 245 18 136 3.94e-25 103
MS.gene04545.t1 AT3G01140 45.192 104 56 1 132 234 55 158 4.13e-25 106
MS.gene04545.t1 AT5G07690 42.609 115 64 2 120 233 1 114 5.48e-25 105
MS.gene04545.t1 AT5G07700 41.379 116 66 2 120 234 1 115 5.49e-25 105
MS.gene04545.t1 AT5G07700 41.379 116 66 2 120 234 1 115 5.49e-25 105
MS.gene04545.t1 AT5G60890 42.742 124 67 2 134 256 14 134 6.17e-25 104
MS.gene04545.t1 AT1G34670 41.379 116 66 2 120 234 1 115 1.10e-24 105
MS.gene04545.t1 AT5G52600 33.333 192 109 5 134 323 14 188 1.15e-24 101
MS.gene04545.t1 AT5G61420 41.379 116 66 2 120 234 1 115 1.47e-24 104
MS.gene04545.t1 AT4G34990 43.396 106 59 1 134 238 14 119 1.54e-24 102
MS.gene04545.t1 AT5G59780 42.982 114 60 3 134 245 10 120 2.54e-24 101
MS.gene04545.t1 AT3G46130 44.444 108 57 2 134 239 11 117 2.98e-24 101
MS.gene04545.t1 AT2G16720 42.718 103 56 2 134 234 14 115 4.99e-24 101
MS.gene04545.t1 AT5G62320 33.163 196 115 7 121 302 3 196 5.71e-24 100
MS.gene04545.t1 AT2G26950 41.667 108 54 2 131 233 15 118 5.92e-24 103
MS.gene04545.t1 AT3G48920 36.129 155 92 3 134 285 20 170 6.91e-24 100
MS.gene04545.t1 AT2G47190 44.118 102 56 1 134 234 22 123 1.96e-23 99.8
MS.gene04545.t1 AT1G18710 41.509 106 61 1 134 238 14 119 2.06e-23 99.8
MS.gene04545.t1 AT3G01530 35.714 168 93 5 134 294 27 186 2.17e-23 97.8
MS.gene04545.t1 AT4G13480 42.400 125 64 3 134 256 8 126 3.48e-23 98.6
MS.gene04545.t1 AT5G62470 36.508 126 80 0 123 248 3 128 3.75e-23 100
MS.gene04545.t1 AT3G60460 48.039 102 51 2 134 233 13 114 4.83e-23 99.4
MS.gene04545.t1 AT3G30210 41.860 129 63 4 134 251 29 156 5.63e-23 98.6
MS.gene04545.t1 AT2G31180 39.231 130 75 3 120 247 1 128 5.73e-23 97.8
MS.gene04545.t1 AT5G39700 44.444 99 55 0 135 233 57 155 8.86e-23 95.9
MS.gene04545.t1 AT5G57620 41.353 133 72 5 120 247 1 132 1.19e-22 98.6
MS.gene04545.t1 AT3G47600 29.319 191 127 2 123 305 3 193 1.36e-22 98.6
MS.gene04545.t1 AT4G25560 44.118 102 56 1 134 234 12 113 1.60e-22 97.4
MS.gene04545.t1 AT5G26660 50.633 79 38 1 167 245 17 94 1.98e-22 97.8
MS.gene04545.t1 AT3G27810 37.956 137 76 2 134 269 22 150 2.23e-22 95.5
MS.gene04545.t1 AT1G74650 39.823 113 67 1 123 234 3 115 2.29e-22 97.8
MS.gene04545.t1 AT5G23000 41.880 117 65 3 120 234 1 116 2.84e-22 97.4
MS.gene04545.t1 AT1G48000 34.641 153 91 2 134 285 34 178 6.16e-22 94.7
MS.gene04545.t1 AT1G08810 34.228 149 96 2 123 269 3 151 7.51e-22 95.5
MS.gene04545.t1 AT5G49330 41.379 116 66 2 120 234 1 115 7.70e-22 96.7
MS.gene04545.t1 AT5G35550 48.718 78 40 0 167 244 53 130 7.78e-22 95.1
MS.gene04545.t1 AT1G68320 31.720 186 116 5 132 310 19 200 8.41e-22 95.5
MS.gene04545.t1 AT1G56160 40.777 103 58 2 134 234 16 117 1.07e-21 95.5
MS.gene04545.t1 AT5G62470 36.220 127 80 1 123 248 3 129 1.31e-21 95.9
MS.gene04545.t1 AT5G40350 45.263 95 51 1 134 227 19 113 1.58e-21 92.8
MS.gene04545.t1 AT3G62610 41.379 116 66 2 120 234 1 115 1.81e-21 95.5
MS.gene04545.t1 AT3G49690 41.129 124 68 4 120 239 1 123 1.97e-21 94.7
MS.gene04545.t1 AT1G25340 44.660 103 54 2 134 234 20 121 2.66e-21 94.0
MS.gene04545.t1 AT3G28910 42.056 107 61 1 123 228 3 109 2.92e-21 94.7
MS.gene04545.t1 AT1G79180 37.097 124 69 3 113 234 1 117 4.94e-21 93.2
MS.gene04545.t1 AT5G65790 41.129 124 68 4 120 239 1 123 6.43e-21 94.4
MS.gene04545.t1 AT1G16490 36.923 130 73 3 113 240 1 123 7.38e-21 92.4
MS.gene04545.t1 AT1G66370 38.211 123 70 2 120 241 1 118 8.72e-21 91.7
MS.gene04545.t1 AT2G47460 39.655 116 68 2 120 234 1 115 1.21e-20 93.6
MS.gene04545.t1 AT1G14350 39.796 98 59 0 137 234 28 125 1.45e-20 94.0
MS.gene04545.t1 AT1G14350 39.796 98 59 0 137 234 28 125 1.45e-20 94.0
MS.gene04545.t1 AT1G25340 41.584 101 55 1 134 234 20 116 1.57e-20 91.7
MS.gene04545.t1 AT2G02820 40.816 98 58 0 137 234 33 130 1.68e-20 94.4
MS.gene04545.t1 AT2G02820 40.816 98 58 0 137 234 33 130 2.13e-20 93.6
MS.gene04545.t1 AT5G52260 35.393 178 99 5 121 296 5 168 2.46e-20 90.9
MS.gene04545.t1 AT2G02820 43.956 91 51 0 137 227 33 123 2.68e-20 92.0
MS.gene04545.t1 AT3G12820 37.815 119 71 2 122 238 4 121 3.22e-20 89.7
MS.gene04545.t1 AT5G49620 29.018 224 138 4 134 344 28 243 3.27e-20 91.3
MS.gene04545.t1 AT1G25340 41.584 101 55 1 134 234 20 116 3.69e-20 91.3
MS.gene04545.t1 AT4G37780 35.897 117 72 3 120 234 1 116 5.38e-20 90.5
MS.gene04545.t1 AT5G14750 50.794 63 31 0 167 229 18 80 5.90e-20 87.0
MS.gene04545.t1 AT2G37630 35.036 137 84 2 136 267 6 142 7.92e-20 91.3
MS.gene04545.t1 AT1G66380 46.078 102 54 1 128 228 4 105 1.19e-19 85.5
MS.gene04545.t1 AT3G53200 32.704 159 96 2 167 320 12 164 1.39e-19 87.0
MS.gene04545.t1 AT1G56650 45.631 103 55 1 128 229 4 106 3.04e-19 87.4
MS.gene04545.t1 AT1G66390 46.078 102 54 1 128 228 4 105 1.51e-18 85.1
MS.gene04545.t1 AT3G06490 43.878 98 52 2 132 227 19 115 1.91e-18 86.3
MS.gene04545.t1 AT3G27810 39.806 103 54 1 167 269 7 101 8.76e-18 81.3
MS.gene04545.t1 AT1G79180 31.852 135 58 2 134 234 16 150 9.20e-18 84.3
MS.gene04545.t1 AT2G36890 36.752 117 71 3 120 234 1 116 1.63e-17 83.2
MS.gene04545.t1 AT5G59780 44.304 79 42 1 167 245 23 99 2.89e-17 80.9
MS.gene04545.t1 AT2G36890 36.752 117 71 3 120 234 42 157 3.67e-17 82.8
MS.gene04545.t1 AT5G40350 52.459 61 29 0 167 227 8 68 5.22e-17 79.0
MS.gene04545.t1 AT3G46130 45.205 73 40 0 167 239 23 95 6.41e-17 80.5
MS.gene04545.t1 AT3G47600 47.059 68 36 0 167 234 42 109 6.71e-17 82.0
MS.gene04545.t1 AT3G46130 45.205 73 40 0 167 239 13 85 6.73e-17 80.1
MS.gene04545.t1 AT5G49620 27.311 238 138 5 134 344 28 257 7.50e-17 81.6
MS.gene04545.t1 AT3G12820 44.444 72 40 0 167 238 2 73 7.19e-16 76.3
MS.gene04545.t1 AT3G18100 36.735 98 60 2 131 227 492 588 9.69e-15 77.0
MS.gene04545.t1 AT3G18100 36.170 94 60 0 134 227 546 639 5.88e-14 74.7
MS.gene04545.t1 AT1G22640 47.368 57 30 0 178 234 2 58 1.04e-14 73.2
MS.gene04545.t1 AT3G18100 36.735 98 60 2 131 227 444 540 1.41e-14 76.6
MS.gene04545.t1 AT3G18100 36.170 94 60 0 134 227 498 591 7.72e-14 74.3
MS.gene04545.t1 AT3G18100 36.735 98 60 2 131 227 331 427 1.69e-14 76.3
MS.gene04545.t1 AT3G18100 36.170 94 60 0 134 227 385 478 9.48e-14 73.9
MS.gene04545.t1 AT1G71030 40.000 65 39 0 170 234 5 69 1.76e-14 72.0
MS.gene04545.t1 AT1G71030 40.000 65 39 0 170 234 19 83 1.98e-14 72.0
MS.gene04545.t1 AT3G18100 36.735 98 60 2 131 227 279 375 2.42e-14 75.9
MS.gene04545.t1 AT3G18100 36.170 94 60 0 134 227 333 426 1.34e-13 73.6
MS.gene04545.t1 AT5G14750 39.706 68 41 0 178 245 2 69 3.27e-14 70.1
MS.gene04545.t1 AT5G14750 39.706 68 41 0 178 245 2 69 3.27e-14 70.1
MS.gene04545.t1 AT3G23250 31.724 145 84 3 178 321 2 132 4.32e-14 72.0
MS.gene04545.t1 AT1G66380 49.206 63 32 0 167 229 11 73 7.54e-13 65.1
MS.gene04545.t1 AT1G14350 43.333 60 34 0 175 234 23 82 1.83e-11 65.9
MS.gene04545.t1 AT1G14350 43.333 60 34 0 175 234 23 82 1.83e-11 65.9

Find 101 sgRNAs with CRISPR-Local

Find 197 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAATTTGGTTTAGGGTAAT+TGG 0.208552 3.1:+47491059 None:intergenic
CTGCCATTGATAGATTCTTA+TGG 0.247531 3.1:-47493998 MS.gene04545:CDS
AGGGTTTGAAGAGGGTTTCT+TGG 0.262586 3.1:+47491158 None:intergenic
GAATCTGATTACTGTTAGTT+TGG 0.268681 3.1:+47491124 None:intergenic
TTCTTGGAGTAGGGGTTAAC+AGG 0.288498 3.1:+47491174 None:intergenic
GAAGGTAGTGATCAGAATTA+AGG 0.315331 3.1:+47490989 None:intergenic
GAAGAGGGTTTCTTGGAGTA+GGG 0.325395 3.1:+47491165 None:intergenic
GACATCATACTATTATTATT+AGG 0.332195 3.1:+47493870 None:intergenic
ATCATTGGAATGCAACAAAA+AGG 0.334346 3.1:-47491506 MS.gene04545:CDS
GAAGAGAGAGATGGATTTGT+TGG 0.339685 3.1:-47490893 MS.gene04545:CDS
TGCCATTGATAGATTCTTAT+GGG 0.346398 3.1:-47493997 MS.gene04545:CDS
ATTGCATTCTCAGTTCTTCC+TGG 0.352568 3.1:+47491534 None:intergenic
CTCCCTGATGTTACTGATTG+TGG 0.355914 3.1:-47491102 MS.gene04545:CDS
TAGCTTTGTTGATCAGCTAT+TGG 0.363373 3.1:-47493838 MS.gene04545:CDS
AGAGATGGATTTGTTGGAGT+TGG 0.366710 3.1:-47490887 MS.gene04545:CDS
GATCAAAATATTTATAGCTT+TGG 0.368101 3.1:-47493927 MS.gene04545:CDS
GAAAATTTCATGAAACCAAT+TGG 0.372690 3.1:-47494086 None:intergenic
GAAGATGCGATCAATGGTTT+AGG 0.381677 3.1:-47493759 MS.gene04545:CDS
AAGTGACATACTTTGATATC+AGG 0.394233 3.1:+47492988 None:intergenic
ATTAGGCCACATAAAACTAT+AGG 0.401368 3.1:+47493887 None:intergenic
AATCTGATTACTGTTAGTTT+GGG 0.404398 3.1:+47491125 None:intergenic
ATCACCAACCACTCTTCTAT+TGG 0.413518 3.1:-47494032 MS.gene04545:CDS
TTAGTTTGGGAAGAATAGTA+AGG 0.415895 3.1:+47491138 None:intergenic
AGCAATATGGTGTAAGAAAA+TGG 0.419388 3.1:-47493083 MS.gene04545:CDS
CCACCAATACGTACTCCAAT+TGG 0.419604 3.1:+47494071 None:intergenic
TTTAGGGTAATTGGAAGGAT+TGG 0.423178 3.1:+47491068 None:intergenic
AGAATGCAATAAAGAATCAT+TGG 0.427236 3.1:-47491521 MS.gene04545:CDS
GAGATAGCAAAGAGAATTCC+AGG 0.427432 3.1:-47491552 MS.gene04545:CDS
TGAAGAGGGTTTCTTGGAGT+AGG 0.427723 3.1:+47491164 None:intergenic
AACAATGTGGAGTTGCATCT+TGG 0.428463 3.1:-47490937 MS.gene04545:CDS
CTGAAGTTGGTGAAGCAATA+TGG 0.437823 3.1:-47493096 MS.gene04545:CDS
ACAATGTGGAGTTGCATCTT+GGG 0.440360 3.1:-47490936 MS.gene04545:CDS
CAAATGAAGAGGTGATGAAT+TGG 0.443517 3.1:-47493815 MS.gene04545:CDS
GTCTCAAATAGCTGAGAAGT+TGG 0.449298 3.1:-47493061 MS.gene04545:CDS
GTAGAAACTCATGGCATGAT+TGG 0.452723 3.1:-47491588 MS.gene04545:CDS
AAGGAAGATTGGTTTGAAGA+AGG 0.458004 3.1:+47491309 None:intergenic
GGAGTAGGGGTTAACAGGTT+CGG 0.458012 3.1:+47491179 None:intergenic
ACATGTTGCAGAAAGATAGT+TGG 0.459027 3.1:-47491635 MS.gene04545:intron
ATTCAAGGAGAAAGAACAAA+AGG 0.472167 3.1:-47491476 MS.gene04545:CDS
GAATTAAGGTAATTCATCAT+AGG 0.473352 3.1:+47491003 None:intergenic
AGGAAGATTGGTTTGAAGAA+GGG 0.477815 3.1:+47491310 None:intergenic
TTCTGAATTCCATTCAGCAT+TGG 0.479415 3.1:+47490964 None:intergenic
AATCCACAATCAGTAACATC+AGG 0.481489 3.1:+47491099 None:intergenic
TCAAAGGAAATTGCTGAAGT+TGG 0.481875 3.1:-47493109 MS.gene04545:intron
TCTTTCTCCACACACAATGA+AGG 0.482009 3.1:+47493780 None:intergenic
TACCTTCCTCCAATGCTGAA+TGG 0.484131 3.1:-47490973 MS.gene04545:CDS
GGAAAGGGTGCAAAAGTGGT+TGG 0.491374 3.1:-47493738 MS.gene04545:CDS
TGAATTCCATTCAGCATTGG+AGG 0.495675 3.1:+47490967 None:intergenic
GAATAGTAAGGGTTTGAAGA+GGG 0.496870 3.1:+47491150 None:intergenic
GAGAAGTTGGAAGGAAGAGC+TGG 0.505174 3.1:-47493048 MS.gene04545:CDS
GGTTTACCATCAGTGGTTTG+AGG 0.505708 3.1:+47491453 None:intergenic
GAAAGCAGTGTAGGGAAAGA+TGG 0.507446 3.1:-47493026 MS.gene04545:CDS
TTTAGGAAAGGGTGCAAAAG+TGG 0.509549 3.1:-47493742 MS.gene04545:CDS
TGAAAAGTTGTTGCATGAAG+AGG 0.512671 3.1:+47491217 None:intergenic
TGGCATGATTGGAAACCGTT+GGG 0.512956 3.1:-47491577 MS.gene04545:CDS
GTTGGAGTGAAGAAGAAGAA+AGG 0.512967 3.1:-47491617 MS.gene04545:CDS
AAACCAATTGGAGTACGTAT+TGG 0.519717 3.1:-47494074 MS.gene04545:CDS
GCGATCAATGGTTTAGGAAA+GGG 0.521321 3.1:-47493753 MS.gene04545:CDS
GAAGAGCTGGAAAGCAGTGT+AGG 0.523888 3.1:-47493035 MS.gene04545:CDS
ATGGCATGATTGGAAACCGT+TGG 0.528169 3.1:-47491578 MS.gene04545:CDS
AAGAGGGTTTCTTGGAGTAG+GGG 0.530916 3.1:+47491166 None:intergenic
AGTCCACTGTCCTTTGATCA+AGG 0.536979 3.1:+47493686 None:intergenic
CCAATTGGAGTACGTATTGG+TGG 0.542694 3.1:-47494071 MS.gene04545:CDS
AAGAGCTGGAAAGCAGTGTA+GGG 0.544280 3.1:-47493034 MS.gene04545:CDS
AGATTGTGGTTTACCATCAG+TGG 0.552835 3.1:+47491446 None:intergenic
AGTAGTAGTAGCAGTAGTAC+CGG 0.553178 3.1:+47491374 None:intergenic
TGCGATCAATGGTTTAGGAA+AGG 0.553524 3.1:-47493754 MS.gene04545:CDS
GAGAAAGAAGATGCGATCAA+TGG 0.556688 3.1:-47493765 MS.gene04545:CDS
AGAATAGTAAGGGTTTGAAG+AGG 0.556843 3.1:+47491149 None:intergenic
GGGAATATGAATTTCTCAGA+GGG 0.558195 3.1:-47490916 MS.gene04545:CDS
TCTTGAAGAATAGAAGATTG+TGG 0.558587 3.1:+47491432 None:intergenic
ACCCCATAAGAATCTATCAA+TGG 0.560596 3.1:+47493995 None:intergenic
TTCCATTCAGCATTGGAGGA+AGG 0.564838 3.1:+47490971 None:intergenic
ACAAATTCCTTCATTGTGTG+TGG 0.567848 3.1:-47493787 MS.gene04545:CDS
TCATAAGATTCAGATATAAG+TGG 0.570449 3.1:+47491249 None:intergenic
CTCAGAGGGGAAGAGAGAGA+TGG 0.571224 3.1:-47490902 MS.gene04545:CDS
AATCTATCAATGGCAGTCAA+AGG 0.571369 3.1:+47494005 None:intergenic
TTTGGTTTAGGGTAATTGGA+AGG 0.578739 3.1:+47491063 None:intergenic
CAAATAGCTGAGAAGTTGGA+AGG 0.580510 3.1:-47493057 MS.gene04545:CDS
TAGTTTGGGAAGAATAGTAA+GGG 0.586373 3.1:+47491139 None:intergenic
AGTAGTAGCAGTAGTACCGG+TGG 0.586523 3.1:+47491377 None:intergenic
GTCCTCAGAGATCGCTGACA+CGG 0.599223 3.1:+47491332 None:intergenic
AGTGGACTGATGAAGAAGAC+AGG 0.601588 3.1:-47493671 MS.gene04545:intron
AGGACCAATAGAAGAGTGGT+TGG 0.605891 3.1:+47494028 None:intergenic
TTTCCTTGATCAAAGGACAG+TGG 0.611527 3.1:-47493689 MS.gene04545:CDS
TCTTTGCTATCTCCGCCCAA+CGG 0.615526 3.1:+47491562 None:intergenic
AAGGTAATTCATCATAGGTG+TGG 0.625090 3.1:+47491008 None:intergenic
AAAAGGCCTCAAACCACTGA+TGG 0.628725 3.1:-47491459 MS.gene04545:CDS
TCAGCTATTGGCAAATGAAG+AGG 0.629014 3.1:-47493826 MS.gene04545:CDS
CATGATTGGAAACCGTTGGG+CGG 0.641685 3.1:-47491574 MS.gene04545:CDS
GCCATTGATAGATTCTTATG+GGG 0.643647 3.1:-47493996 MS.gene04545:CDS
ATCCACAATCAGTAACATCA+GGG 0.650690 3.1:+47491100 None:intergenic
CTATCAATGGCAGTCAAAGG+AGG 0.652795 3.1:+47494008 None:intergenic
AAAGATGGCATAATCATCTG+AGG 0.662817 3.1:-47493011 MS.gene04545:CDS
CTCCGTGTCAGCGATCTCTG+AGG 0.667016 3.1:-47491334 MS.gene04545:CDS
AAGGAGGACCAATAGAAGAG+TGG 0.673968 3.1:+47494024 None:intergenic
TGGGAATATGAATTTCTCAG+AGG 0.674443 3.1:-47490917 MS.gene04545:CDS
AGGATGCTAGTAGAAACTCA+TGG 0.688422 3.1:-47491597 MS.gene04545:CDS
GGAATATGAATTTCTCAGAG+GGG 0.702999 3.1:-47490915 MS.gene04545:CDS
ATTGGAGTACGTATTGGTGG+TGG 0.703614 3.1:-47494068 MS.gene04545:CDS
AATTCAGAATCAGAACAATG+TGG 0.714283 3.1:-47490950 MS.gene04545:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTTTAATAATATATATT+TGG - chr3.1:47491656-47491675 MS.gene04545:intron 0.0%
!!! TTTTTTTAATAATATATATT+TGG - chr3.1:47491625-47491644 MS.gene04545:CDS 0.0%
!! AAATATATTGAAAAAATTGA+AGG + chr3.1:47491986-47492005 None:intergenic 10.0%
!!! AAAATATAACTAAATTTTCT+AGG + chr3.1:47492460-47492479 None:intergenic 10.0%
!!! AAATTTTTTTAATTGTCTTT+TGG - chr3.1:47492903-47492922 MS.gene04545:intron 10.0%
!!! GTCTTTTAATAATATATATT+TGG - chr3.1:47491768-47491787 MS.gene04545:intron 10.0%
!!! TCTTGTTATATAAAAAAAAA+TGG - chr3.1:47491693-47491712 MS.gene04545:intron 10.0%
!!! TTTTTATGATATTATATACT+TGG - chr3.1:47491469-47491488 MS.gene04545:CDS 10.0%
!! TTTATATTTACTTATCGATA+TGG - chr3.1:47493148-47493167 MS.gene04545:intron 15.0%
!!! AAATCATAGATAAATTTTCA+AGG + chr3.1:47492130-47492149 None:intergenic 15.0%
!!! ATATTTATCTTTTAAACTCT+TGG - chr3.1:47492554-47492573 MS.gene04545:intron 15.0%
!!! TAAATATAAAGAGTATACTA+AGG + chr3.1:47493138-47493157 None:intergenic 15.0%
!!! TATATTTGGACTAAATTTTA+AGG - chr3.1:47491670-47491689 MS.gene04545:intron 15.0%
!!! TATTTATCTTTTAAACTCTT+GGG - chr3.1:47492555-47492574 MS.gene04545:intron 15.0%
!!! TTGTTGTTATATAAAATCAA+AGG - chr3.1:47491816-47491835 MS.gene04545:intron 15.0%
!! ATTCAAGTGAATGATAAATT+TGG + chr3.1:47492285-47492304 None:intergenic 20.0%
!! GACATCATACTATTATTATT+AGG + chr3.1:47491074-47491093 None:intergenic 20.0%
!! GATCAAAATATTTATAGCTT+TGG - chr3.1:47491014-47491033 MS.gene04545:CDS 20.0%
!!! TATATTTGGGCTAAATTTTA+AGG - chr3.1:47491782-47491801 MS.gene04545:intron 20.0%
! AAACACTCAAACAACAATTA+GGG + chr3.1:47491309-47491328 None:intergenic 25.0%
! AGAATGCAATAAAGAATCAT+TGG - chr3.1:47493420-47493439 MS.gene04545:intron 25.0%
! ATGACAATAAATCCAAACTA+GGG + chr3.1:47492725-47492744 None:intergenic 25.0%
! ATGCAAGTCAATGATAAATT+TGG + chr3.1:47492636-47492655 None:intergenic 25.0%
! GAAACTTGGAAAAAAAAGTA+CGG + chr3.1:47493206-47493225 None:intergenic 25.0%
! GAATTAAGGTAATTCATCAT+AGG + chr3.1:47493941-47493960 None:intergenic 25.0%
! GTCAAAGATTAATACATACA+AGG - chr3.1:47492593-47492612 MS.gene04545:intron 25.0%
! TAGAAAAAACAAAGGAAGAT+TGG + chr3.1:47493646-47493665 None:intergenic 25.0%
! TATACTTGGACTAAATTTGA+AGG - chr3.1:47491483-47491502 MS.gene04545:CDS 25.0%
! TATGACAATAAATCCAAACT+AGG + chr3.1:47492726-47492745 None:intergenic 25.0%
! TCATAAGATTCAGATATAAG+TGG + chr3.1:47493695-47493714 None:intergenic 25.0%
!! AATCTGATTACTGTTAGTTT+GGG + chr3.1:47493819-47493838 None:intergenic 25.0%
!! TTTGTTGAAGTTTCTTTTGA+GGG + chr3.1:47490986-47491005 None:intergenic 25.0%
!! TTTTGTTGAAGTTTCTTTTG+AGG + chr3.1:47490987-47491006 None:intergenic 25.0%
!!! ATTTTTCTAGGATCTATCTT+TGG - chr3.1:47492504-47492523 MS.gene04545:intron 25.0%
!!! CTTTTTTTTCCAAGTTTCTT+CGG - chr3.1:47493208-47493227 MS.gene04545:intron 25.0%
!!! GCATCTAATTTGATTTTTCT+AGG - chr3.1:47492492-47492511 MS.gene04545:intron 25.0%
!!! TACATGTTGTTTTGTGAATT+TGG + chr3.1:47493899-47493918 None:intergenic 25.0%
!!! TGTTTTGTGAATTTGGTTTA+GGG + chr3.1:47493892-47493911 None:intergenic 25.0%
!!! TTGGTGTTACTTTTAAACAA+AGG - chr3.1:47491517-47491536 MS.gene04545:CDS 25.0%
!!! TTGTTTTGTGAATTTGGTTT+AGG + chr3.1:47493893-47493912 None:intergenic 25.0%
!!! TTTGAAGGTGTTTTGTTATT+TGG - chr3.1:47491498-47491517 MS.gene04545:CDS 25.0%
!!! TTTGATAATGCATGTAAATG+CGG - chr3.1:47491381-47491400 MS.gene04545:CDS 25.0%
!!! TTTTTTTTCCAAGTTTCTTC+GGG - chr3.1:47493209-47493228 MS.gene04545:intron 25.0%
AAACCTTGTCAAGGTTATTT+GGG + chr3.1:47492404-47492423 None:intergenic 30.0%
AAGTGACATACTTTGATATC+AGG + chr3.1:47491956-47491975 None:intergenic 30.0%
AATTCAGAATCAGAACAATG+TGG - chr3.1:47493991-47494010 MS.gene04545:CDS 30.0%
AGCAATATGGTGTAAGAAAA+TGG - chr3.1:47491858-47491877 MS.gene04545:intron 30.0%
ATCATTGGAATGCAACAAAA+AGG - chr3.1:47493435-47493454 MS.gene04545:intron 30.0%
ATTAATCCAAACGTGGATTT+AGG + chr3.1:47492368-47492387 None:intergenic 30.0%
ATTAGGCCACATAAAACTAT+AGG + chr3.1:47491057-47491076 None:intergenic 30.0%
ATTCAAGGAGAAAGAACAAA+AGG - chr3.1:47493465-47493484 MS.gene04545:intron 30.0%
CAAAAAGGAGACAAAATTCA+AGG - chr3.1:47493450-47493469 MS.gene04545:intron 30.0%
CAAACACTCAAACAACAATT+AGG + chr3.1:47491310-47491329 None:intergenic 30.0%
CTACTTATGAGAAATATGGA+GGG + chr3.1:47492813-47492832 None:intergenic 30.0%
CTCCATATTTCTCATAAGTA+GGG - chr3.1:47492812-47492831 MS.gene04545:intron 30.0%
GAAAAAGAAGACACTTTCTT+AGG + chr3.1:47491236-47491255 None:intergenic 30.0%
GAATCTGATTACTGTTAGTT+TGG + chr3.1:47493820-47493839 None:intergenic 30.0%
GGAAGTCTAATGTTAGTAAA+TGG - chr3.1:47493230-47493249 MS.gene04545:intron 30.0%
GGATAGGTTAGAAAAAACAA+AGG + chr3.1:47493654-47493673 None:intergenic 30.0%
TAAGACAATTAATCCAAACG+TGG + chr3.1:47492375-47492394 None:intergenic 30.0%
TAGTTTGGGAAGAATAGTAA+GGG + chr3.1:47493805-47493824 None:intergenic 30.0%
TATCCTACTTATGAGAAAAG+TGG + chr3.1:47492431-47492450 None:intergenic 30.0%
TCATTCCATGTTTAGATTCA+CGG - chr3.1:47493079-47493098 MS.gene04545:CDS 30.0%
TCTATATCTTATGAACTTGC+AGG - chr3.1:47492242-47492261 MS.gene04545:intron 30.0%
TCTTGAAGAATAGAAGATTG+TGG + chr3.1:47493512-47493531 None:intergenic 30.0%
TGCAACATGTAAAGTAAGTT+CGG + chr3.1:47493296-47493315 None:intergenic 30.0%
TGCCATTGATAGATTCTTAT+GGG - chr3.1:47490944-47490963 MS.gene04545:CDS 30.0%
! ATGATGAATTTTCATGGGAT+AGG + chr3.1:47493670-47493689 None:intergenic 30.0%
! TCTTCTTTTTCCTTGATCAA+AGG - chr3.1:47491245-47491264 MS.gene04545:CDS 30.0%
! TGAATTTGGTTTAGGGTAAT+TGG + chr3.1:47493885-47493904 None:intergenic 30.0%
! TTAGTTTGGGAAGAATAGTA+AGG + chr3.1:47493806-47493825 None:intergenic 30.0%
!! ACTATATGAAAGTGCTAGAT+TGG - chr3.1:47492976-47492995 MS.gene04545:intron 30.0%
!! TAGCATATGGTTCTAAATTG+CGG - chr3.1:47491334-47491353 MS.gene04545:CDS 30.0%
!! TGGTGATGATGAATTTTCAT+GGG + chr3.1:47493675-47493694 None:intergenic 30.0%
!!! CTTCAACCTATAGTTTTATG+TGG - chr3.1:47491048-47491067 MS.gene04545:CDS 30.0%
AAACCAATTGGAGTACGTAT+TGG - chr3.1:47490867-47490886 MS.gene04545:CDS 35.0%
AAACCCAAATAACCTTGACA+AGG - chr3.1:47492784-47492803 MS.gene04545:intron 35.0%
AAAGATGGCATAATCATCTG+AGG - chr3.1:47491930-47491949 MS.gene04545:intron 35.0%
AAGGTAATTCATCATAGGTG+TGG + chr3.1:47493936-47493955 None:intergenic 35.0%
AATCCACAATCAGTAACATC+AGG + chr3.1:47493845-47493864 None:intergenic 35.0%
AATCTATCAATGGCAGTCAA+AGG + chr3.1:47490939-47490958 None:intergenic 35.0%
ACAAATTCCTTCATTGTGTG+TGG - chr3.1:47491154-47491173 MS.gene04545:CDS 35.0%
ACATGTTGCAGAAAGATAGT+TGG - chr3.1:47493306-47493325 MS.gene04545:intron 35.0%
ACCCCATAAGAATCTATCAA+TGG + chr3.1:47490949-47490968 None:intergenic 35.0%
AGAATAGTAAGGGTTTGAAG+AGG + chr3.1:47493795-47493814 None:intergenic 35.0%
AGGAGAAATGAGAGAAATTG+TGG + chr3.1:47492699-47492718 None:intergenic 35.0%
ATAAATCCAAACTAGGGTTC+AGG + chr3.1:47492719-47492738 None:intergenic 35.0%
ATCCACAATCAGTAACATCA+GGG + chr3.1:47493844-47493863 None:intergenic 35.0%
ATGACTAAATCACACCAACA+AGG - chr3.1:47492845-47492864 MS.gene04545:intron 35.0%
ATTCACCGTGAATCTAAACA+TGG + chr3.1:47493087-47493106 None:intergenic 35.0%
CAAATGAAGAGGTGATGAAT+TGG - chr3.1:47491126-47491145 MS.gene04545:CDS 35.0%
CACCCTACTTATGAGAAATA+TGG + chr3.1:47492817-47492836 None:intergenic 35.0%
CCTACTTATGAGAAATATGG+AGG + chr3.1:47492814-47492833 None:intergenic 35.0%
CCTCCATATTTCTCATAAGT+AGG - chr3.1:47492811-47492830 MS.gene04545:intron 35.0%
CTACTTATGAGAAAAGTGGA+GGG + chr3.1:47492427-47492446 None:intergenic 35.0%
CTGCCATTGATAGATTCTTA+TGG - chr3.1:47490943-47490962 MS.gene04545:CDS 35.0%
GAAACCTTGTCAAGGTTATT+TGG + chr3.1:47492405-47492424 None:intergenic 35.0%
GAAGGTAGTGATCAGAATTA+AGG + chr3.1:47493955-47493974 None:intergenic 35.0%
GAATAGTAAGGGTTTGAAGA+GGG + chr3.1:47493794-47493813 None:intergenic 35.0%
GAGTGTTTGTTTGTAGCATA+TGG - chr3.1:47491321-47491340 MS.gene04545:CDS 35.0%
GCCATTGATAGATTCTTATG+GGG - chr3.1:47490945-47490964 MS.gene04545:CDS 35.0%
GGAATATGAATTTCTCAGAG+GGG - chr3.1:47494026-47494045 MS.gene04545:CDS 35.0%
GGAGAAATGAGAGAAATTGT+GGG + chr3.1:47492698-47492717 None:intergenic 35.0%
GGGAATATGAATTTCTCAGA+GGG - chr3.1:47494025-47494044 MS.gene04545:CDS 35.0%
TCAAAGGAAATTGCTGAAGT+TGG - chr3.1:47491832-47491851 MS.gene04545:intron 35.0%
TGAAAAGTTGTTGCATGAAG+AGG + chr3.1:47493727-47493746 None:intergenic 35.0%
TGGGAATATGAATTTCTCAG+AGG - chr3.1:47494024-47494043 MS.gene04545:CDS 35.0%
TTCTGAATTCCATTCAGCAT+TGG + chr3.1:47493980-47493999 None:intergenic 35.0%
! CTTCATGCAACAACTTTTCA+AGG - chr3.1:47493727-47493746 MS.gene04545:CDS 35.0%
! TTTAGGGTAATTGGAAGGAT+TGG + chr3.1:47493876-47493895 None:intergenic 35.0%
! TTTGGTTTAGGGTAATTGGA+AGG + chr3.1:47493881-47493900 None:intergenic 35.0%
!! AAGGAAGATTGGTTTGAAGA+AGG + chr3.1:47493635-47493654 None:intergenic 35.0%
!! AGGAAGATTGGTTTGAAGAA+GGG + chr3.1:47493634-47493653 None:intergenic 35.0%
!! GTGGTGATGATGAATTTTCA+TGG + chr3.1:47493676-47493695 None:intergenic 35.0%
!! TAGCTTTGTTGATCAGCTAT+TGG - chr3.1:47491103-47491122 MS.gene04545:CDS 35.0%
!! TGAAAGTGCTAGATTGGAAA+TGG - chr3.1:47492982-47493001 MS.gene04545:intron 35.0%
!! TGTCAAGGTTATTTGGGTTT+TGG + chr3.1:47492784-47492803 None:intergenic 35.0%
!!! AAGGTTATTTGGGTTTTGGA+GGG + chr3.1:47492780-47492799 None:intergenic 35.0%
AACAATGTGGAGTTGCATCT+TGG - chr3.1:47494004-47494023 MS.gene04545:CDS 40.0%
AATCCAAACGTGGATTTAGG+AGG + chr3.1:47492365-47492384 None:intergenic 40.0%
ACAATGTGGAGTTGCATCTT+GGG - chr3.1:47494005-47494024 MS.gene04545:CDS 40.0%
ACCTTGTCAAGGTTATTTGG+AGG + chr3.1:47492402-47492421 None:intergenic 40.0%
AGATTGTGGTTTACCATCAG+TGG + chr3.1:47493498-47493517 None:intergenic 40.0%
AGGATGCTAGTAGAAACTCA+TGG - chr3.1:47493344-47493363 MS.gene04545:intron 40.0%
AGTAGTAGTAGCAGTAGTAC+CGG + chr3.1:47493570-47493589 None:intergenic 40.0%
ATCACCAACCACTCTTCTAT+TGG - chr3.1:47490909-47490928 MS.gene04545:CDS 40.0%
ATTCCTCCTAAATCCACGTT+TGG - chr3.1:47492359-47492378 MS.gene04545:intron 40.0%
ATTGCATTCTCAGTTCTTCC+TGG + chr3.1:47493410-47493429 None:intergenic 40.0%
ATTTCTCCTGAACCCTAGTT+TGG - chr3.1:47492710-47492729 MS.gene04545:intron 40.0%
CAAATAGCTGAGAAGTTGGA+AGG - chr3.1:47491884-47491903 MS.gene04545:intron 40.0%
CCTACTTATGAGAAAAGTGG+AGG + chr3.1:47492428-47492447 None:intergenic 40.0%
CCTTGTCAAGGTTATTTGGA+GGG + chr3.1:47492401-47492420 None:intergenic 40.0%
GAAATGAGAGAAATTGTGGG+AGG + chr3.1:47492695-47492714 None:intergenic 40.0%
GAAGATGCGATCAATGGTTT+AGG - chr3.1:47491182-47491201 MS.gene04545:CDS 40.0%
GAGAAAGAAGATGCGATCAA+TGG - chr3.1:47491176-47491195 MS.gene04545:CDS 40.0%
GAGATAGCAAAGAGAATTCC+AGG - chr3.1:47493389-47493408 MS.gene04545:intron 40.0%
GCGATCAATGGTTTAGGAAA+GGG - chr3.1:47491188-47491207 MS.gene04545:CDS 40.0%
GGAATGTGAGAAAATGTTGG+AGG + chr3.1:47492344-47492363 None:intergenic 40.0%
GGAGGAATGTGAGAAAATGT+TGG + chr3.1:47492347-47492366 None:intergenic 40.0%
GTAAGTTCGGAGTCATAAAG+TGG + chr3.1:47493283-47493302 None:intergenic 40.0%
GTAGAAACTCATGGCATGAT+TGG - chr3.1:47493353-47493372 MS.gene04545:intron 40.0%
GTCTCAAATAGCTGAGAAGT+TGG - chr3.1:47491880-47491899 MS.gene04545:intron 40.0%
GTTGGAGTGAAGAAGAAGAA+AGG - chr3.1:47493324-47493343 MS.gene04545:intron 40.0%
TCAGCTATTGGCAAATGAAG+AGG - chr3.1:47491115-47491134 MS.gene04545:CDS 40.0%
TCTTTCTCCACACACAATGA+AGG + chr3.1:47491164-47491183 None:intergenic 40.0%
TGAGTATTTGCACACCTTGT+TGG + chr3.1:47492862-47492881 None:intergenic 40.0%
TGCGATCAATGGTTTAGGAA+AGG - chr3.1:47491187-47491206 MS.gene04545:CDS 40.0%
TTAGACTTCCCGAAGAAACT+TGG + chr3.1:47493220-47493239 None:intergenic 40.0%
TTTCCTTGATCAAAGGACAG+TGG - chr3.1:47491252-47491271 MS.gene04545:CDS 40.0%
! GAAGAGAGAGATGGATTTGT+TGG - chr3.1:47494048-47494067 MS.gene04545:CDS 40.0%
! GTTCTAAATTGCAGCCGAAT+CGG + chr3.1:47491407-47491426 None:intergenic 40.0%
! TGAATTCCATTCAGCATTGG+AGG + chr3.1:47493977-47493996 None:intergenic 40.0%
! TTTAGGAAAGGGTGCAAAAG+TGG - chr3.1:47491199-47491218 MS.gene04545:CDS 40.0%
!! ACTACTCAAAAAGCATCCAC+CGG - chr3.1:47493548-47493567 MS.gene04545:intron 40.0%
!! AGAGATGGATTTGTTGGAGT+TGG - chr3.1:47494054-47494073 MS.gene04545:CDS 40.0%
!! CAAGGTTATTTGGGTTTTGG+AGG + chr3.1:47492781-47492800 None:intergenic 40.0%
!! CCTCCACTTTTCTCATAAGT+AGG - chr3.1:47492425-47492444 MS.gene04545:intron 40.0%
!! CTGAAGTTGGTGAAGCAATA+TGG - chr3.1:47491845-47491864 MS.gene04545:intron 40.0%
!! GAAGTTTCTTTTGAGGGAAG+TGG + chr3.1:47490980-47490999 None:intergenic 40.0%
AAAAGGCCTCAAACCACTGA+TGG - chr3.1:47493482-47493501 MS.gene04545:intron 45.0%
AAGAGCTGGAAAGCAGTGTA+GGG - chr3.1:47491907-47491926 MS.gene04545:intron 45.0%
AAGAGGGTTTCTTGGAGTAG+GGG + chr3.1:47493778-47493797 None:intergenic 45.0%
AAGGAGGACCAATAGAAGAG+TGG + chr3.1:47490920-47490939 None:intergenic 45.0%
AGGACCAATAGAAGAGTGGT+TGG + chr3.1:47490916-47490935 None:intergenic 45.0%
AGGGTTTGAAGAGGGTTTCT+TGG + chr3.1:47493786-47493805 None:intergenic 45.0%
AGTCCACTGTCCTTTGATCA+AGG + chr3.1:47491258-47491277 None:intergenic 45.0%
ATGGCATGATTGGAAACCGT+TGG - chr3.1:47493363-47493382 MS.gene04545:intron 45.0%
CCAATTGGAGTACGTATTGG+TGG - chr3.1:47490870-47490889 MS.gene04545:CDS 45.0%
CCACCAATACGTACTCCAAT+TGG + chr3.1:47490873-47490892 None:intergenic 45.0%
CCCTCCAAATAACCTTGACA+AGG - chr3.1:47492398-47492417 MS.gene04545:intron 45.0%
CTATCAATGGCAGTCAAAGG+AGG + chr3.1:47490936-47490955 None:intergenic 45.0%
GAAAGCAGTGTAGGGAAAGA+TGG - chr3.1:47491915-47491934 MS.gene04545:intron 45.0%
GAAGAGGGTTTCTTGGAGTA+GGG + chr3.1:47493779-47493798 None:intergenic 45.0%
GGTTTACCATCAGTGGTTTG+AGG + chr3.1:47493491-47493510 None:intergenic 45.0%
TACCTTCCTCCAATGCTGAA+TGG - chr3.1:47493968-47493987 MS.gene04545:CDS 45.0%
TATGGAGGGAAACCTTGTCA+AGG + chr3.1:47492799-47492818 None:intergenic 45.0%
TGAAGAGGGTTTCTTGGAGT+AGG + chr3.1:47493780-47493799 None:intergenic 45.0%
TGGCATGATTGGAAACCGTT+GGG - chr3.1:47493364-47493383 MS.gene04545:intron 45.0%
TTCTTGGAGTAGGGGTTAAC+AGG + chr3.1:47493770-47493789 None:intergenic 45.0%
! ATTGGAGTACGTATTGGTGG+TGG - chr3.1:47490873-47490892 MS.gene04545:CDS 45.0%
! CTCCCTGATGTTACTGATTG+TGG - chr3.1:47493839-47493858 MS.gene04545:CDS 45.0%
! TTCCATTCAGCATTGGAGGA+AGG + chr3.1:47493973-47493992 None:intergenic 45.0%
!! AGTGGACTGATGAAGAAGAC+AGG - chr3.1:47491270-47491289 MS.gene04545:CDS 45.0%
!!! TCTTTTAATAATATATATTT+GGG - chr3.1:47491769-47491788 MS.gene04545:intron 5.0%
AGTGGAGGGAAACCTTGTCA+AGG + chr3.1:47492413-47492432 None:intergenic 50.0%
CATGATTGGAAACCGTTGGG+CGG - chr3.1:47493367-47493386 MS.gene04545:intron 50.0%
GAAGAGCTGGAAAGCAGTGT+AGG - chr3.1:47491906-47491925 MS.gene04545:intron 50.0%
GAGAAGTTGGAAGGAAGAGC+TGG - chr3.1:47491893-47491912 MS.gene04545:intron 50.0%
GCATGTAAATGCGGCCGATT+CGG - chr3.1:47491390-47491409 MS.gene04545:CDS 50.0%
GGAGTAGGGGTTAACAGGTT+CGG + chr3.1:47493765-47493784 None:intergenic 50.0%
TCTATCTTTGGCATCTGCGC+AGG - chr3.1:47492516-47492535 MS.gene04545:intron 50.0%
! AGTAGTAGCAGTAGTACCGG+TGG + chr3.1:47493567-47493586 None:intergenic 50.0%
! GGAAAGGGTGCAAAAGTGGT+TGG - chr3.1:47491203-47491222 MS.gene04545:CDS 50.0%
! TCTTTGCTATCTCCGCCCAA+CGG + chr3.1:47493382-47493401 None:intergenic 50.0%
CTCAGAGGGGAAGAGAGAGA+TGG - chr3.1:47494039-47494058 MS.gene04545:CDS 55.0%
GTCCTCAGAGATCGCTGACA+CGG + chr3.1:47493612-47493631 None:intergenic 55.0%
CTCCGTGTCAGCGATCTCTG+AGG - chr3.1:47493607-47493626 MS.gene04545:intron 60.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 47490864 47494099 47490864 ID=MS.gene04545
chr3.1 mRNA 47490864 47494099 47490864 ID=MS.gene04545.t1;Parent=MS.gene04545
chr3.1 exon 47493672 47494099 47493672 ID=MS.gene04545.t1.exon1;Parent=MS.gene04545.t1
chr3.1 CDS 47493672 47494099 47493672 ID=cds.MS.gene04545.t1;Parent=MS.gene04545.t1
chr3.1 exon 47492999 47493125 47492999 ID=MS.gene04545.t1.exon2;Parent=MS.gene04545.t1
chr3.1 CDS 47492999 47493125 47492999 ID=cds.MS.gene04545.t1;Parent=MS.gene04545.t1
chr3.1 exon 47490864 47491646 47490864 ID=MS.gene04545.t1.exon3;Parent=MS.gene04545.t1
chr3.1 CDS 47490864 47491646 47490864 ID=cds.MS.gene04545.t1;Parent=MS.gene04545.t1
Gene Sequence

>MS.gene04545

ATGAAACCAATTGGAGTACGTATTGGTGGTGGTGATAATTTAAAGATCACCAACCACTCTTCTATTGGTCCTCCTTTGACTGCCATTGATAGATTCTTATGGGGTCAACACAACCACTTCCCTCAAAAGAAACTTCAACAAAATGTTGATGATCAAAATATTTATAGCTTTGGTTGTTCGAATGCTTCAACCTATAGTTTTATGTGGCCTAATAATAATAGTATGATGTCTCAAGAAGCTAGCTTTGTTGATCAGCTATTGGCAAATGAAGAGGTGATGAATTGGACACAACAAATTCCTTCATTGTGTGTGGAGAAAGAAGATGCGATCAATGGTTTAGGAAAGGGTGCAAAAGTGGTTGGAAGAAGACCTAAGAAAGTGTCTTCTTTTTCCTTGATCAAAGGACAGTGGACTGATGAAGAAGACAGGTTTTGTAATCAAACCCTAATTGTTGTTTGAGTGTTTGTTTGTAGCATATGGTTCTAAATTGCGGTCGAAGTCGTGTATACGTTAAAATTTTGATAATGCATGTAAATGCGGCCGATTCGGCTGCAATTTAGAACTATGTTGATGAATGTATGATTGTGTGTGTGTGTGTGTGTGTCTTTTTATGATATTATATACTTGGACTAAATTTGAAGGTGTTTTGTTATTTGGTGTTACTTTTAAACAAAGGAAATTGTTGCACTTGTAGATCTCAATTGAACTATGTTTGTGATTTCTTTTTTGTCAATTTTTTTTTTTGTGAAAAGATTTGTGAATTTTTTTAATAATATATATTTGGACTAAGTGTATTTTTAATAATATATATTTGGACTAAATTTTAAGGTCTTGTTATATAAAAAAAAATGGTACAATTGCACAATTTAGAACTATCTTTGTGAAAGTAAGTTGTTGTTTGTCTGTCTTTTAATAATATATATTTGGGCTAAATTTTAAGGTGTTTTGTAATTTGTTGTTATATAAAATCAAAGGAAATTGCTGAAGTTGGTGAAGCAATATGGTGTAAGAAAATGGTCTCAAATAGCTGAGAAGTTGGAAGGAAGAGCTGGAAAGCAGTGTAGGGAAAGATGGCATAATCATCTGAGGCCTGATATCAAAGTATGTCACTTCTTTAATCCTTCAATTTTTTCAATATATTTTCTCTTTAGAACAATATATTGAAAAAATATATTTTCAATATATTTTTTCAATATATAAAGCAATGAACTCTCAAAATAAAATATAGAACAATGATTTATATTTGATATATGTTTTAGCTAGCCTTGAAAATTTATCTATGATTTTCATAATAATAGTGCATGAAGATTTAGATGTGATTTTTCTAAGATCTATTTTTGTCATCTGCTCAGTTCGATCAGTTTGTCTTTATCTACTTTCTATATCTTATGAACTTGCAGGCATAATCTTGTCACTTTCCAAATTTATCATTCACTTGAATGTTTTGATTTTACTATATTTATTCAGAACTTTGATTCCTCCAACATTTTCTCACATTCCTCCTAAATCCACGTTTGGATTAATTGTCTTATTTCCCTCCAAATAACCTTGACAAGGTTTCCCTCCACTTTTCTCATAAGTAGGATATTTTAGCCTAGAAAATTTAGTTATATTTTGATAATTATTGAGCATCTAATTTGATTTTTCTAGGATCTATCTTTGGCATCTGCGCAGGTTGATCACTTTTTCTATATTTATCTTTTAAACTCTTGGGATGTAAAGTTTCTAAGTCAAAGATTAATACATACAAGGCTTAACGTTTTCACTTTCCAAATTTATCATTGACTTGCATGTTTTGATTTTACTATATTTATTCAGAACTTTGTTTCCTCCCACAATTTCTCTCATTTCTCCTGAACCCTAGTTTGGATTTATTGTCATATTAATACAGAAAACTTTGCTAATTAGAGTTTCCCTCCAAAACCCAAATAACCTTGACAAGGTTTCCCTCCATATTTCTCATAAGTAGGGTGTTATACATATGACTAAATCACACCAACAAGGTGTGCAAATACTCAGTTCTTTCTTTTCTTGTCTTTAAATTTTTTTAATTGTCTTTTGGTAAAGAAATTTAATAATATACTAACAATGTGCATACTAATTTTTTATAGAACTATATGAAAGTGCTAGATTGGAAATGGTTTTTTGATTCTTATAAAGATAGTTTAACATATGAAAGTGCTATCTTGAAAATAGTTTTTTGATTCGTTTCAAGTCATTCCATGTTTAGATTCACGGTGAATTTGACGTCTCATCATAACATTATACATGCCTTAGTATACTCTTTATATTTACTTATCGATATGGTTTTTTGTTTCTTTAATTTTATATTTTAAAAACCGTACTTTTTTTTCCAAGTTTCTTCGGGAAGTCTAATGTTAGTAAATGGTTAGATGTTAATGAGATTTGAACTTTACCACTTTATGACTCCGAACTTACTTTACATGTTGCAGAAAGATAGTTGGAGTGAAGAAGAAGAAAGGATGCTAGTAGAAACTCATGGCATGATTGGAAACCGTTGGGCGGAGATAGCAAAGAGAATTCCAGGAAGAACTGAGAATGCAATAAAGAATCATTGGAATGCAACAAAAAGGAGACAAAATTCAAGGAGAAAGAACAAAAGGCCTCAAACCACTGATGGTAAACCACAATCTTCTATTCTTCAAGACTACATCAAAACTTTGACTACTCAAAAAGCATCCACCGGTACTACTGCTACTACTACTACTGCTGCTACTACTAGCTCCGTGTCAGCGATCTCTGAGGACCCTTCTTCAAACCAATCTTCCTTTGTTTTTTCTAACCTATCCCATGAAAATTCATCATCACCACTTATATCTGAATCTTATGATGATGAACTCCTCTTCATGCAACAACTTTTCAAGGTGAATAATAACGCCGAACCTGTTAACCCCTACTCCAAGAAACCCTCTTCAAACCCTTACTATTCTTCCCAAACTAACAGTAATCAGATTCTCCCTGATGTTACTGATTGTGGATTTGTTCATTCCAATCCTTCCAATTACCCTAAACCAAATTCACAAAACAACATGTACTTGAGTACTTCTTCCACACCTATGATGAATTACCTTAATTCTGATCACTACCTTCCTCCAATGCTGAATGGAATTCAGAATCAGAACAATGTGGAGTTGCATCTTGGGAATATGAATTTCTCAGAGGGGAAGAGAGAGATGGATTTGTTGGAGTTGGTTTCTTCTGCTCAGTTTTATTAG
Protein sequence

>MS.gene04545.t1

MKPIGVRIGGGDNLKITNHSSIGPPLTAIDRFLWGQHNHFPQKKLQQNVDDQNIYSFGCSNASTYSFMWPNNNSMMSQEASFVDQLLANEEVMNWTQQIPSLCVEKEDAINGLGKGAKVVGRRPKKVSSFSLIKGQWTDEEDRKLLKLVKQYGVRKWSQIAEKLEGRAGKQCRERWHNHLRPDIKKDSWSEEEERMLVETHGMIGNRWAEIAKRIPGRTENAIKNHWNATKRRQNSRRKNKRPQTTDGKPQSSILQDYIKTLTTQKASTGTTATTTTAATTSSVSAISEDPSSNQSSFVFSNLSHENSSSPLISESYDDELLFMQQLFKVNNNAEPVNPYSKKPSSNPYYSSQTNSNQILPDVTDCGFVHSNPSNYPKPNSQNNMYLSTSSTPMMNYLNSDHYLPPMLNGIQNQNNVELHLGNMNFSEGKREMDLLELVSSAQFY