Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene045512.t1 | XP_003607555.1 | 96.7 | 336 | 10 | 1 | 1 | 336 | 1 | 335 | 1.10E-180 | 642.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene045512.t1 | Q8LPR5 | 32.8 | 390 | 198 | 12 | 5 | 332 | 27 | 414 | 1.7e-33 | 144.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene045512.t1 | G7ZZY9 | 96.7 | 336 | 10 | 1 | 1 | 336 | 1 | 335 | 7.9e-181 | 642.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene045512.t1 | TF | TCP |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene045512.t1 | MTR_4g079580 | 96.726 | 336 | 10 | 1 | 1 | 336 | 1 | 335 | 0.0 | 669 |
MS.gene045512.t1 | MTR_2g090960 | 52.907 | 344 | 122 | 13 | 1 | 329 | 3 | 321 | 2.68e-103 | 306 |
MS.gene045512.t1 | MTR_8g463380 | 83.908 | 87 | 14 | 0 | 3 | 89 | 34 | 120 | 4.86e-46 | 162 |
MS.gene045512.t1 | MTR_2g078200 | 79.762 | 84 | 17 | 0 | 6 | 89 | 3 | 86 | 8.31e-44 | 152 |
MS.gene045512.t1 | MTR_7g015010 | 59.740 | 77 | 31 | 0 | 17 | 93 | 51 | 127 | 1.44e-24 | 102 |
MS.gene045512.t1 | MTR_6g015350 | 61.250 | 80 | 28 | 1 | 17 | 96 | 43 | 119 | 5.88e-22 | 95.1 |
MS.gene045512.t1 | MTR_4g109660 | 57.971 | 69 | 29 | 0 | 16 | 84 | 49 | 117 | 4.61e-20 | 89.4 |
MS.gene045512.t1 | MTR_3g026050 | 46.392 | 97 | 45 | 2 | 17 | 107 | 51 | 146 | 1.42e-19 | 89.0 |
MS.gene045512.t1 | MTR_6g017055 | 48.148 | 81 | 41 | 1 | 3 | 83 | 107 | 186 | 1.34e-17 | 83.6 |
MS.gene045512.t1 | MTR_1g103380 | 55.000 | 60 | 27 | 0 | 23 | 82 | 201 | 260 | 3.50e-16 | 79.7 |
MS.gene045512.t1 | MTR_4g111935 | 46.250 | 80 | 42 | 1 | 3 | 82 | 113 | 191 | 1.80e-15 | 77.0 |
MS.gene045512.t1 | MTR_7g018500 | 53.448 | 58 | 27 | 0 | 25 | 82 | 122 | 179 | 1.58e-14 | 74.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene045512.t1 | AT1G53230 | 36.712 | 365 | 184 | 12 | 5 | 332 | 31 | 385 | 1.58e-48 | 167 |
MS.gene045512.t1 | AT1G53230 | 36.712 | 365 | 184 | 12 | 5 | 332 | 31 | 385 | 1.58e-48 | 167 |
MS.gene045512.t1 | AT2G31070 | 43.265 | 245 | 78 | 7 | 5 | 226 | 11 | 217 | 1.13e-47 | 164 |
MS.gene045512.t1 | AT3G15030 | 34.586 | 399 | 179 | 13 | 5 | 332 | 27 | 414 | 3.72e-47 | 164 |
MS.gene045512.t1 | AT3G15030 | 34.586 | 399 | 179 | 13 | 5 | 332 | 27 | 414 | 3.72e-47 | 164 |
MS.gene045512.t1 | AT3G15030 | 34.586 | 399 | 179 | 13 | 5 | 332 | 27 | 414 | 3.72e-47 | 164 |
MS.gene045512.t1 | AT3G15030 | 34.586 | 399 | 179 | 13 | 5 | 332 | 27 | 414 | 3.72e-47 | 164 |
MS.gene045512.t1 | AT4G18390 | 63.529 | 85 | 26 | 2 | 17 | 96 | 36 | 120 | 3.08e-26 | 107 |
MS.gene045512.t1 | AT4G18390 | 63.529 | 85 | 26 | 2 | 17 | 96 | 36 | 120 | 3.08e-26 | 107 |
MS.gene045512.t1 | AT1G30210 | 65.217 | 69 | 24 | 0 | 16 | 84 | 43 | 111 | 1.01e-22 | 97.1 |
MS.gene045512.t1 | AT1G30210 | 65.217 | 69 | 24 | 0 | 16 | 84 | 43 | 111 | 1.01e-22 | 97.1 |
MS.gene045512.t1 | AT3G02150 | 63.768 | 69 | 25 | 0 | 17 | 85 | 68 | 136 | 4.20e-22 | 94.7 |
MS.gene045512.t1 | AT3G02150 | 63.768 | 69 | 25 | 0 | 17 | 85 | 68 | 136 | 6.97e-22 | 95.1 |
MS.gene045512.t1 | AT5G60970 | 55.696 | 79 | 31 | 2 | 17 | 94 | 57 | 132 | 4.21e-20 | 90.1 |
MS.gene045512.t1 | AT5G08070 | 51.220 | 82 | 37 | 1 | 17 | 95 | 27 | 108 | 6.69e-20 | 87.8 |
MS.gene045512.t1 | AT5G08070 | 51.220 | 82 | 37 | 1 | 17 | 95 | 27 | 108 | 6.69e-20 | 87.8 |
MS.gene045512.t1 | AT1G68800 | 53.846 | 65 | 30 | 0 | 19 | 83 | 108 | 172 | 1.05e-18 | 86.3 |
MS.gene045512.t1 | AT1G68800 | 53.846 | 65 | 30 | 0 | 19 | 83 | 108 | 172 | 1.10e-18 | 86.3 |
MS.gene045512.t1 | AT1G67260 | 50.000 | 66 | 33 | 0 | 18 | 83 | 82 | 147 | 2.19e-17 | 82.4 |
MS.gene045512.t1 | AT1G67260 | 50.000 | 66 | 33 | 0 | 18 | 83 | 82 | 147 | 2.19e-17 | 82.4 |
MS.gene045512.t1 | AT1G67260 | 50.000 | 66 | 33 | 0 | 18 | 83 | 82 | 147 | 2.48e-17 | 82.4 |
MS.gene045512.t1 | AT3G18550 | 50.769 | 65 | 32 | 0 | 18 | 82 | 143 | 207 | 6.80e-15 | 75.5 |
MS.gene045512.t1 | AT3G18550 | 50.769 | 65 | 32 | 0 | 18 | 82 | 143 | 207 | 6.84e-15 | 75.5 |
MS.gene045512.t1 | AT3G18550 | 50.769 | 65 | 32 | 0 | 18 | 82 | 143 | 207 | 6.84e-15 | 75.5 |
MS.gene045512.t1 | AT3G18550 | 50.769 | 65 | 32 | 0 | 18 | 82 | 143 | 207 | 6.95e-15 | 75.5 |
Find 70 sgRNAs with CRISPR-Local
Find 82 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTTCATCAAGCTTCAATCTT+TGG | 0.193207 | 4.2:+30569326 | MS.gene045512:CDS |
AATTCTCAATTCTATGATAT+TGG | 0.253929 | 4.2:-30569106 | None:intergenic |
GTGAAATGAAAGTTGAATTA+TGG | 0.327131 | 4.2:-30568866 | None:intergenic |
TATAAAGAAAGTTGGATTCA+TGG | 0.328597 | 4.2:+30569154 | MS.gene045512:CDS |
TGTCCACCTTGAACTGTATC+AGG | 0.337666 | 4.2:-30569389 | None:intergenic |
AACTTTCTTTATATAATCAT+TGG | 0.342032 | 4.2:-30569144 | None:intergenic |
TTCGACTGAAGGGCCTCATT+TGG | 0.352467 | 4.2:-30569224 | None:intergenic |
GAATGAAACCATTGTGATCT+TGG | 0.357259 | 4.2:-30569004 | None:intergenic |
AGGAGAAGAAGAAGGTCTAT+TGG | 0.357996 | 4.2:-30569432 | None:intergenic |
GAAGTAGGGATGAGGAGTAC+TGG | 0.386702 | 4.2:+30568447 | None:intergenic |
GTAGTTGGAAAGAAAGGTAT+AGG | 0.386721 | 4.2:-30568909 | None:intergenic |
TGCATTCCTGATACAGTTCA+AGG | 0.398078 | 4.2:+30569383 | MS.gene045512:CDS |
AGCCAATCCACTGCTTTGCT+TGG | 0.398100 | 4.2:-30568642 | None:intergenic |
GGAGAGATAGTTCAGGTAGA+AGG | 0.398765 | 4.2:+30568474 | MS.gene045512:CDS |
TAGAAGGAGGACACATAGTT+CGG | 0.402620 | 4.2:+30568490 | MS.gene045512:CDS |
GGAAGCAGGTTTGTTTCTGA+TGG | 0.414475 | 4.2:+30569347 | MS.gene045512:CDS |
TTTGTTTCTGATGGATTAGC+AGG | 0.421645 | 4.2:+30569356 | MS.gene045512:CDS |
AATATCATAGAATTGAGAAT+TGG | 0.422183 | 4.2:+30569108 | MS.gene045512:CDS |
AACTTTGCTCAGTTGTGGTT+AGG | 0.425546 | 4.2:-30569452 | None:intergenic |
GAAGAGGTAGTTGGAAAGAA+AGG | 0.436289 | 4.2:-30568915 | None:intergenic |
AATGATTATATAAAGAAAGT+TGG | 0.442550 | 4.2:+30569146 | MS.gene045512:CDS |
AGGGTAGTTCTGAAAATTGA+TGG | 0.446306 | 4.2:-30568949 | None:intergenic |
AAGCTTCAATCTTTGGAAGC+AGG | 0.461093 | 4.2:+30569333 | MS.gene045512:CDS |
TGGAGGAGGAGAGATAGTTC+AGG | 0.462988 | 4.2:+30568467 | MS.gene045512:CDS |
CAAAAGGTCCTCGTGATCGC+AGG | 0.468784 | 4.2:+30568553 | MS.gene045512:CDS |
ATCACAATGGTTTCATTCCA+TGG | 0.469357 | 4.2:+30569009 | MS.gene045512:CDS |
GAAGAAGTAGAAGAGGTAGT+TGG | 0.473749 | 4.2:-30568924 | None:intergenic |
GGAGAAACATCAGAATCTAA+TGG | 0.478617 | 4.2:+30568798 | MS.gene045512:CDS |
AGAAGGAGGACACATAGTTC+GGG | 0.484476 | 4.2:+30568491 | MS.gene045512:CDS |
TTTCGCATTCTGTTAGTACA+TGG | 0.488530 | 4.2:+30569249 | MS.gene045512:CDS |
AGCAAGGTTTACACATCAAA+AGG | 0.489089 | 4.2:+30568537 | MS.gene045512:CDS |
AACTCAAGTGGAATGGTTGT+TGG | 0.490485 | 4.2:+30568777 | MS.gene045512:CDS |
GATGGATGAAGAAGTAGAAG+AGG | 0.499986 | 4.2:-30568931 | None:intergenic |
CTTCAGAGGTTCATCATCAC+AGG | 0.503181 | 4.2:+30569294 | MS.gene045512:CDS |
GGATCAGTTTCAACATTATG+TGG | 0.505424 | 4.2:-30568888 | None:intergenic |
AAGCTCCGCGAGCTTGTCAA+TGG | 0.510986 | 4.2:-30568685 | None:intergenic |
GGGATGAGGAGTACTGGAGG+AGG | 0.516880 | 4.2:+30568453 | None:intergenic |
TCCTATGGATTCTTCTTCAG+AGG | 0.520790 | 4.2:+30569280 | MS.gene045512:CDS |
GACCAAGCAAAGCAGTGGAT+TGG | 0.524360 | 4.2:+30568640 | MS.gene045512:CDS |
AGGAATGAAGAGAGAGGCCA+AGG | 0.528264 | 4.2:-30568980 | None:intergenic |
CTTCCTCCATGGCATCCAAT+CGG | 0.535397 | 4.2:+30568705 | MS.gene045512:CDS |
TAGAAAACTTTGCTCAGTTG+TGG | 0.537314 | 4.2:-30569457 | None:intergenic |
TACATGGAATGAGATTCCTA+TGG | 0.537407 | 4.2:+30569265 | MS.gene045512:CDS |
GAAACCATTGTGATCTTGGA+AGG | 0.539513 | 4.2:-30569000 | None:intergenic |
AAAGTAGTTGCAAACTCAAG+TGG | 0.543287 | 4.2:+30568765 | MS.gene045512:CDS |
AGACAATTGAGTGAGAATCA+AGG | 0.556151 | 4.2:+30568840 | MS.gene045512:CDS |
GTAGGGATGAGGAGTACTGG+AGG | 0.556752 | 4.2:+30568450 | None:intergenic |
AGCTCGCGGAGCTTCCTCCA+TGG | 0.559593 | 4.2:+30568694 | MS.gene045512:CDS |
AGTTGCAAACTCAAGTGGAA+TGG | 0.583308 | 4.2:+30568770 | MS.gene045512:CDS |
ACTTTCTGAACTTCTTCTAG+AGG | 0.585901 | 4.2:-30568747 | None:intergenic |
TTCAGAATACTCTCCAAATG+AGG | 0.589921 | 4.2:+30569211 | MS.gene045512:CDS |
ACAGTTCAAGGTGGACAAGA+GGG | 0.596091 | 4.2:+30569395 | MS.gene045512:CDS |
AAAAGGTCCTCGTGATCGCA+GGG | 0.597089 | 4.2:+30568554 | MS.gene045512:CDS |
AACTACCCTTCTGAAAACCT+TGG | 0.597609 | 4.2:+30568963 | MS.gene045512:CDS |
CATACTTGTTGTGATTGCCA+TGG | 0.603271 | 4.2:-30569026 | None:intergenic |
TACAGTTCAAGGTGGACAAG+AGG | 0.610010 | 4.2:+30569394 | MS.gene045512:CDS |
TGCTTGGTCTGTCATAGCCG+AGG | 0.612632 | 4.2:-30568626 | None:intergenic |
TACGATGTTCAAGATCGCCT+CGG | 0.620277 | 4.2:+30568609 | MS.gene045512:CDS |
CATTCCTTCCAAGATCACAA+TGG | 0.621086 | 4.2:+30568996 | MS.gene045512:CDS |
AGTCGAACCCTGCGATCACG+AGG | 0.621133 | 4.2:-30568561 | None:intergenic |
AGTATTCTGAACCTGAACCT+TGG | 0.621967 | 4.2:-30569199 | None:intergenic |
GAGATAGTTCAGGTAGAAGG+AGG | 0.622890 | 4.2:+30568477 | MS.gene045512:CDS |
TTGAACATCGTAGAATTCGA+TGG | 0.627660 | 4.2:-30568598 | None:intergenic |
TGACAGACCAAGCAAAGCAG+TGG | 0.629311 | 4.2:+30568635 | MS.gene045512:CDS |
TTGTGGTTAGGAGAAGAAGA+AGG | 0.640804 | 4.2:-30569440 | None:intergenic |
CTTGGAAGGAATGAAGAGAG+AGG | 0.651388 | 4.2:-30568986 | None:intergenic |
TCGCCGATTGGATGCCATGG+AGG | 0.652394 | 4.2:-30568708 | None:intergenic |
ACCTCTGAAGAAGAATCCAT+AGG | 0.653923 | 4.2:-30569281 | None:intergenic |
GTCTTCCATTGACAAGCTCG+CGG | 0.658985 | 4.2:+30568680 | MS.gene045512:CDS |
ATTCCTGATACAGTTCAAGG+TGG | 0.774068 | 4.2:+30569386 | MS.gene045512:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AACTTTCTTTATATAATCAT+TGG | - | chr4.2:30569147-30569166 | None:intergenic | 15.0% |
!! | AATGATTATATAAAGAAAGT+TGG | + | chr4.2:30569146-30569165 | MS.gene045512:CDS | 15.0% |
!! | AATATCATAGAATTGAGAAT+TGG | + | chr4.2:30569108-30569127 | MS.gene045512:CDS | 20.0% |
!! | AATTCTCAATTCTATGATAT+TGG | - | chr4.2:30569109-30569128 | None:intergenic | 20.0% |
! | GTGAAATGAAAGTTGAATTA+TGG | - | chr4.2:30568869-30568888 | None:intergenic | 25.0% |
! | TATAAAGAAAGTTGGATTCA+TGG | + | chr4.2:30569154-30569173 | MS.gene045512:CDS | 25.0% |
!! | ATTGGTTCTCAAAAAAAGTT+TGG | - | chr4.2:30569091-30569110 | None:intergenic | 25.0% |
!!! | AAAAAGTTTGGTTTTGGTTT+TGG | - | chr4.2:30569079-30569098 | None:intergenic | 25.0% |
!!! | TCTCAAAAAAAGTTTGGTTT+TGG | - | chr4.2:30569085-30569104 | None:intergenic | 25.0% |
!! | GGTTTTCATTTGAAGTTTCA+TGG | - | chr4.2:30569058-30569077 | None:intergenic | 30.0% |
AAAGTAGTTGCAAACTCAAG+TGG | + | chr4.2:30568765-30568784 | MS.gene045512:CDS | 35.0% | |
AATGCGAAAAATTCGACTGA+AGG | - | chr4.2:30569238-30569257 | None:intergenic | 35.0% | |
ACTTTCTGAACTTCTTCTAG+AGG | - | chr4.2:30568750-30568769 | None:intergenic | 35.0% | |
AGACAATTGAGTGAGAATCA+AGG | + | chr4.2:30568840-30568859 | MS.gene045512:CDS | 35.0% | |
AGCAAGGTTTACACATCAAA+AGG | + | chr4.2:30568537-30568556 | MS.gene045512:CDS | 35.0% | |
ATCACAATGGTTTCATTCCA+TGG | + | chr4.2:30569009-30569028 | MS.gene045512:CDS | 35.0% | |
ATGCGAAAAATTCGACTGAA+GGG | - | chr4.2:30569237-30569256 | None:intergenic | 35.0% | |
GAATGAAACCATTGTGATCT+TGG | - | chr4.2:30569007-30569026 | None:intergenic | 35.0% | |
GGAGAAACATCAGAATCTAA+TGG | + | chr4.2:30568798-30568817 | MS.gene045512:CDS | 35.0% | |
GGATCAGTTTCAACATTATG+TGG | - | chr4.2:30568891-30568910 | None:intergenic | 35.0% | |
GTTCATCAAGCTTCAATCTT+TGG | + | chr4.2:30569326-30569345 | MS.gene045512:CDS | 35.0% | |
TAAAAAAGATCGTCACAGCA+AGG | + | chr4.2:30568521-30568540 | MS.gene045512:CDS | 35.0% | |
TACATGGAATGAGATTCCTA+TGG | + | chr4.2:30569265-30569284 | MS.gene045512:CDS | 35.0% | |
TTCAGAATACTCTCCAAATG+AGG | + | chr4.2:30569211-30569230 | MS.gene045512:CDS | 35.0% | |
TTGAACATCGTAGAATTCGA+TGG | - | chr4.2:30568601-30568620 | None:intergenic | 35.0% | |
TTTCGCATTCTGTTAGTACA+TGG | + | chr4.2:30569249-30569268 | MS.gene045512:CDS | 35.0% | |
! | GTAGTTGGAAAGAAAGGTAT+AGG | - | chr4.2:30568912-30568931 | None:intergenic | 35.0% |
!! | AGGGTAGTTCTGAAAATTGA+TGG | - | chr4.2:30568952-30568971 | None:intergenic | 35.0% |
!! | TTTGTTTCTGATGGATTAGC+AGG | + | chr4.2:30569356-30569375 | MS.gene045512:CDS | 35.0% |
!!! | GTAAACTCACAGCCATTTTT+AGG | + | chr4.2:30569176-30569195 | MS.gene045512:CDS | 35.0% |
AACTCAAGTGGAATGGTTGT+TGG | + | chr4.2:30568777-30568796 | MS.gene045512:CDS | 40.0% | |
AGGAGAAGAAGAAGGTCTAT+TGG | - | chr4.2:30569435-30569454 | None:intergenic | 40.0% | |
AGTATTCTGAACCTGAACCT+TGG | - | chr4.2:30569202-30569221 | None:intergenic | 40.0% | |
AGTTGCAAACTCAAGTGGAA+TGG | + | chr4.2:30568770-30568789 | MS.gene045512:CDS | 40.0% | |
ATTCCTGATACAGTTCAAGG+TGG | + | chr4.2:30569386-30569405 | MS.gene045512:CDS | 40.0% | |
CATTCCTTCCAAGATCACAA+TGG | + | chr4.2:30568996-30569015 | MS.gene045512:CDS | 40.0% | |
GAAACCATTGTGATCTTGGA+AGG | - | chr4.2:30569003-30569022 | None:intergenic | 40.0% | |
GAAGAAGTAGAAGAGGTAGT+TGG | - | chr4.2:30568927-30568946 | None:intergenic | 40.0% | |
GAAGAGGTAGTTGGAAAGAA+AGG | - | chr4.2:30568918-30568937 | None:intergenic | 40.0% | |
GATGGATGAAGAAGTAGAAG+AGG | - | chr4.2:30568934-30568953 | None:intergenic | 40.0% | |
TAGAAGGAGGACACATAGTT+CGG | + | chr4.2:30568490-30568509 | MS.gene045512:CDS | 40.0% | |
TCCTATGGATTCTTCTTCAG+AGG | + | chr4.2:30569280-30569299 | MS.gene045512:CDS | 40.0% | |
TGCATTCCTGATACAGTTCA+AGG | + | chr4.2:30569383-30569402 | MS.gene045512:CDS | 40.0% | |
TTGTGGTTAGGAGAAGAAGA+AGG | - | chr4.2:30569443-30569462 | None:intergenic | 40.0% | |
! | AACTACCCTTCTGAAAACCT+TGG | + | chr4.2:30568963-30568982 | MS.gene045512:CDS | 40.0% |
! | AAGCTTCAATCTTTGGAAGC+AGG | + | chr4.2:30569333-30569352 | MS.gene045512:CDS | 40.0% |
! | ACCTCTGAAGAAGAATCCAT+AGG | - | chr4.2:30569284-30569303 | None:intergenic | 40.0% |
!! | AGAGTTTGATTTTCGCCGAT+TGG | - | chr4.2:30568723-30568742 | None:intergenic | 40.0% |
!! | CATACTTGTTGTGATTGCCA+TGG | - | chr4.2:30569029-30569048 | None:intergenic | 40.0% |
!!! | GCTGTGACGATCTTTTTTAC+TGG | - | chr4.2:30568520-30568539 | None:intergenic | 40.0% |
!!! | GTGACGATCTTTTTTACTGG+TGG | - | chr4.2:30568517-30568536 | None:intergenic | 40.0% |
ACAGTTCAAGGTGGACAAGA+GGG | + | chr4.2:30569395-30569414 | MS.gene045512:CDS | 45.0% | |
AGAAGGAGGACACATAGTTC+GGG | + | chr4.2:30568491-30568510 | MS.gene045512:CDS | 45.0% | |
CCTGAACCTTGGCCTAAAAA+TGG | - | chr4.2:30569191-30569210 | None:intergenic | 45.0% | |
CTTCAGAGGTTCATCATCAC+AGG | + | chr4.2:30569294-30569313 | MS.gene045512:CDS | 45.0% | |
CTTGGAAGGAATGAAGAGAG+AGG | - | chr4.2:30568989-30569008 | None:intergenic | 45.0% | |
GAGATAGTTCAGGTAGAAGG+AGG | + | chr4.2:30568477-30568496 | MS.gene045512:CDS | 45.0% | |
GGAGAGATAGTTCAGGTAGA+AGG | + | chr4.2:30568474-30568493 | MS.gene045512:CDS | 45.0% | |
TACAGTTCAAGGTGGACAAG+AGG | + | chr4.2:30569394-30569413 | MS.gene045512:CDS | 45.0% | |
TACGATGTTCAAGATCGCCT+CGG | + | chr4.2:30568609-30568628 | MS.gene045512:CDS | 45.0% | |
TGTCCACCTTGAACTGTATC+AGG | - | chr4.2:30569392-30569411 | None:intergenic | 45.0% | |
! | AGAGGCCAAGGTTTTCAGAA+GGG | - | chr4.2:30568971-30568990 | None:intergenic | 45.0% |
!! | CCATTTTTAGGCCAAGGTTC+AGG | + | chr4.2:30569188-30569207 | MS.gene045512:CDS | 45.0% |
!! | GGAAGCAGGTTTGTTTCTGA+TGG | + | chr4.2:30569347-30569366 | MS.gene045512:CDS | 45.0% |
!!! | TCACAGCCATTTTTAGGCCA+AGG | + | chr4.2:30569182-30569201 | MS.gene045512:CDS | 45.0% |
AAAAGGTCCTCGTGATCGCA+GGG | + | chr4.2:30568554-30568573 | MS.gene045512:CDS | 50.0% | |
AGCCAATCCACTGCTTTGCT+TGG | - | chr4.2:30568645-30568664 | None:intergenic | 50.0% | |
AGGAATGAAGAGAGAGGCCA+AGG | - | chr4.2:30568983-30569002 | None:intergenic | 50.0% | |
CTTCCTCCATGGCATCCAAT+CGG | + | chr4.2:30568705-30568724 | MS.gene045512:CDS | 50.0% | |
GACCAAGCAAAGCAGTGGAT+TGG | + | chr4.2:30568640-30568659 | MS.gene045512:CDS | 50.0% | |
GTCTTCCATTGACAAGCTCG+CGG | + | chr4.2:30568680-30568699 | MS.gene045512:CDS | 50.0% | |
TGACAGACCAAGCAAAGCAG+TGG | + | chr4.2:30568635-30568654 | MS.gene045512:CDS | 50.0% | |
TGGAGGAGGAGAGATAGTTC+AGG | + | chr4.2:30568467-30568486 | MS.gene045512:CDS | 50.0% | |
TTCGACTGAAGGGCCTCATT+TGG | - | chr4.2:30569227-30569246 | None:intergenic | 50.0% | |
! | GAGAGGCCAAGGTTTTCAGA+AGG | - | chr4.2:30568972-30568991 | None:intergenic | 50.0% |
!! | TTTTCGCCGATTGGATGCCA+TGG | - | chr4.2:30568714-30568733 | None:intergenic | 50.0% |
AAGCTCCGCGAGCTTGTCAA+TGG | - | chr4.2:30568688-30568707 | None:intergenic | 55.0% | |
CAAAAGGTCCTCGTGATCGC+AGG | + | chr4.2:30568553-30568572 | MS.gene045512:CDS | 55.0% | |
TGCTTGGTCTGTCATAGCCG+AGG | - | chr4.2:30568629-30568648 | None:intergenic | 55.0% | |
AGTCGAACCCTGCGATCACG+AGG | - | chr4.2:30568564-30568583 | None:intergenic | 60.0% | |
! | TCGCCGATTGGATGCCATGG+AGG | - | chr4.2:30568711-30568730 | None:intergenic | 60.0% |
AGCTCGCGGAGCTTCCTCCA+TGG | + | chr4.2:30568694-30568713 | MS.gene045512:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.2 | gene | 30568456 | 30569466 | 30568456 | ID=MS.gene045512 |
chr4.2 | mRNA | 30568456 | 30569466 | 30568456 | ID=MS.gene045512.t1;Parent=MS.gene045512 |
chr4.2 | exon | 30568456 | 30569466 | 30568456 | ID=MS.gene045512.t1.exon1;Parent=MS.gene045512.t1 |
chr4.2 | CDS | 30568456 | 30569466 | 30568456 | ID=cds.MS.gene045512.t1;Parent=MS.gene045512.t1 |
Gene Sequence |
Protein sequence |