Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene045567.t1 | XP_003607509.2 | 83 | 407 | 65 | 2 | 1 | 406 | 20 | 423 | 5.90E-173 | 617.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene045567.t1 | Q9SIV3 | 47.6 | 391 | 156 | 18 | 39 | 407 | 57 | 420 | 9.9e-68 | 258.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene045567.t1 | G7JTX7 | 83.0 | 407 | 65 | 2 | 1 | 406 | 20 | 423 | 4.3e-173 | 617.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene045567.t1 | TF | GARP-G2-like |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene045567.t1 | MTR_4g078810 | 93.627 | 408 | 22 | 2 | 1 | 407 | 20 | 424 | 0.0 | 697 |
MS.gene045567.t1 | MTR_2g090675 | 63.593 | 423 | 112 | 18 | 8 | 407 | 21 | 424 | 4.65e-155 | 444 |
MS.gene045567.t1 | MTR_4g098870 | 37.234 | 282 | 141 | 11 | 127 | 404 | 299 | 548 | 2.04e-43 | 159 |
MS.gene045567.t1 | MTR_4g098870 | 37.234 | 282 | 141 | 11 | 127 | 404 | 319 | 568 | 2.41e-43 | 159 |
MS.gene045567.t1 | MTR_4g098870 | 36.552 | 290 | 148 | 11 | 119 | 404 | 330 | 587 | 2.53e-43 | 159 |
MS.gene045567.t1 | MTR_5g014040 | 34.516 | 310 | 144 | 10 | 103 | 398 | 267 | 531 | 2.91e-43 | 159 |
MS.gene045567.t1 | MTR_5g014040 | 33.968 | 315 | 144 | 11 | 103 | 398 | 227 | 496 | 2.92e-41 | 152 |
MS.gene045567.t1 | MTR_5g014040 | 33.968 | 315 | 144 | 11 | 103 | 398 | 267 | 536 | 4.10e-41 | 153 |
MS.gene045567.t1 | MTR_4g098870 | 39.189 | 148 | 76 | 4 | 119 | 258 | 311 | 452 | 4.70e-26 | 110 |
MS.gene045567.t1 | MTR_4g098870 | 39.189 | 148 | 76 | 4 | 119 | 258 | 291 | 432 | 5.05e-26 | 110 |
MS.gene045567.t1 | MTR_4g021760 | 38.710 | 93 | 56 | 1 | 102 | 194 | 134 | 225 | 1.03e-17 | 83.6 |
MS.gene045567.t1 | MTR_1g032570 | 37.037 | 135 | 73 | 2 | 62 | 196 | 67 | 189 | 1.12e-17 | 85.5 |
MS.gene045567.t1 | MTR_1g032570 | 37.037 | 135 | 73 | 2 | 62 | 196 | 136 | 258 | 1.34e-17 | 85.1 |
MS.gene045567.t1 | MTR_3g106220 | 47.368 | 76 | 40 | 0 | 130 | 205 | 190 | 265 | 2.16e-17 | 84.7 |
MS.gene045567.t1 | MTR_7g117705 | 36.290 | 124 | 56 | 3 | 133 | 237 | 186 | 305 | 2.22e-16 | 81.3 |
MS.gene045567.t1 | MTR_1g013170 | 54.545 | 66 | 30 | 0 | 135 | 200 | 188 | 253 | 2.99e-16 | 80.9 |
MS.gene045567.t1 | MTR_4g121020 | 56.667 | 60 | 26 | 0 | 137 | 196 | 110 | 169 | 6.24e-16 | 80.1 |
MS.gene045567.t1 | MTR_2g450070 | 54.839 | 62 | 28 | 0 | 133 | 194 | 208 | 269 | 6.53e-16 | 80.1 |
MS.gene045567.t1 | MTR_2g450070 | 54.839 | 62 | 28 | 0 | 133 | 194 | 208 | 269 | 6.79e-16 | 80.1 |
MS.gene045567.t1 | MTR_4g121020 | 56.667 | 60 | 26 | 0 | 137 | 196 | 214 | 273 | 8.08e-16 | 79.7 |
MS.gene045567.t1 | MTR_4g121020 | 56.667 | 60 | 26 | 0 | 137 | 196 | 214 | 273 | 8.14e-16 | 79.7 |
MS.gene045567.t1 | MTR_7g026400 | 57.812 | 64 | 27 | 0 | 127 | 190 | 146 | 209 | 2.32e-15 | 78.2 |
MS.gene045567.t1 | MTR_2g034960 | 40.230 | 87 | 47 | 1 | 137 | 218 | 210 | 296 | 9.18e-15 | 76.6 |
MS.gene045567.t1 | MTR_7g089010 | 44.872 | 78 | 37 | 1 | 119 | 196 | 78 | 149 | 1.01e-14 | 74.7 |
MS.gene045567.t1 | MTR_1g013180 | 55.000 | 60 | 27 | 0 | 135 | 194 | 339 | 398 | 1.20e-14 | 76.3 |
MS.gene045567.t1 | MTR_4g021790 | 38.710 | 93 | 56 | 1 | 102 | 194 | 133 | 224 | 1.50e-14 | 73.9 |
MS.gene045567.t1 | MTR_8g079940 | 47.826 | 69 | 36 | 0 | 137 | 205 | 208 | 276 | 3.78e-14 | 74.3 |
MS.gene045567.t1 | MTR_3g102600 | 50.000 | 54 | 27 | 0 | 143 | 196 | 88 | 141 | 6.79e-14 | 70.1 |
MS.gene045567.t1 | MTR_4g064730 | 39.506 | 81 | 49 | 0 | 125 | 205 | 118 | 198 | 6.96e-14 | 72.4 |
MS.gene045567.t1 | MTR_3g102600 | 50.000 | 54 | 27 | 0 | 143 | 196 | 137 | 190 | 1.36e-13 | 70.1 |
MS.gene045567.t1 | MTR_4g021855 | 40.449 | 89 | 52 | 1 | 106 | 194 | 137 | 224 | 2.10e-13 | 70.9 |
MS.gene045567.t1 | MTR_4g086835 | 42.045 | 88 | 47 | 1 | 134 | 221 | 270 | 353 | 2.12e-13 | 71.6 |
MS.gene045567.t1 | MTR_3g086100 | 44.928 | 69 | 38 | 0 | 137 | 205 | 127 | 195 | 2.62e-13 | 71.6 |
MS.gene045567.t1 | MTR_3g086100 | 44.928 | 69 | 38 | 0 | 137 | 205 | 198 | 266 | 4.21e-13 | 71.2 |
MS.gene045567.t1 | MTR_3g102590 | 45.902 | 61 | 33 | 0 | 130 | 190 | 135 | 195 | 6.56e-13 | 68.6 |
MS.gene045567.t1 | MTR_4g131600 | 41.667 | 84 | 47 | 1 | 136 | 217 | 199 | 282 | 8.27e-13 | 70.5 |
MS.gene045567.t1 | MTR_4g021845 | 36.585 | 82 | 51 | 1 | 106 | 187 | 137 | 217 | 1.01e-12 | 67.4 |
MS.gene045567.t1 | MTR_4g113140 | 34.921 | 126 | 60 | 3 | 90 | 194 | 168 | 292 | 1.13e-12 | 69.7 |
MS.gene045567.t1 | MTR_6g032990 | 56.364 | 55 | 23 | 1 | 140 | 193 | 44 | 98 | 1.71e-12 | 68.9 |
MS.gene045567.t1 | MTR_4g131570 | 49.091 | 55 | 28 | 0 | 136 | 190 | 201 | 255 | 2.77e-12 | 68.9 |
MS.gene045567.t1 | MTR_3g102600 | 48.936 | 47 | 24 | 0 | 143 | 189 | 88 | 134 | 5.72e-12 | 63.5 |
MS.gene045567.t1 | MTR_4g086835 | 41.573 | 89 | 47 | 2 | 134 | 221 | 270 | 354 | 6.58e-12 | 67.0 |
MS.gene045567.t1 | MTR_1g093080 | 36.275 | 102 | 52 | 2 | 129 | 217 | 202 | 303 | 7.51e-12 | 66.6 |
MS.gene045567.t1 | MTR_2g086450 | 55.769 | 52 | 22 | 1 | 140 | 190 | 47 | 98 | 8.61e-12 | 66.6 |
MS.gene045567.t1 | MTR_0450s0040 | 51.852 | 54 | 26 | 0 | 137 | 190 | 168 | 221 | 9.13e-12 | 66.2 |
MS.gene045567.t1 | MTR_3g102600 | 48.936 | 47 | 24 | 0 | 143 | 189 | 137 | 183 | 1.34e-11 | 63.5 |
MS.gene045567.t1 | MTR_4g131580 | 49.091 | 55 | 28 | 0 | 136 | 190 | 198 | 252 | 1.51e-11 | 66.6 |
MS.gene045567.t1 | MTR_1g053830 | 49.057 | 53 | 26 | 1 | 139 | 190 | 19 | 71 | 2.72e-11 | 60.5 |
MS.gene045567.t1 | MTR_5g041350 | 44.000 | 75 | 36 | 3 | 140 | 213 | 17 | 86 | 4.67e-11 | 64.3 |
MS.gene045567.t1 | MTR_7g088070 | 47.222 | 72 | 34 | 2 | 123 | 190 | 32 | 103 | 8.47e-11 | 62.8 |
MS.gene045567.t1 | MTR_7g088070 | 47.222 | 72 | 34 | 2 | 123 | 190 | 32 | 103 | 9.03e-11 | 62.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene045567.t1 | AT2G20570 | 49.109 | 393 | 147 | 18 | 39 | 407 | 57 | 420 | 1.81e-84 | 264 |
MS.gene045567.t1 | AT2G20570 | 47.188 | 409 | 147 | 19 | 39 | 407 | 57 | 436 | 2.29e-80 | 254 |
MS.gene045567.t1 | AT5G44190 | 44.499 | 409 | 149 | 17 | 12 | 403 | 37 | 384 | 4.84e-72 | 231 |
MS.gene045567.t1 | AT5G44190 | 47.826 | 253 | 104 | 9 | 12 | 260 | 37 | 265 | 2.21e-59 | 197 |
MS.gene045567.t1 | AT2G20570 | 39.186 | 393 | 139 | 19 | 39 | 407 | 57 | 373 | 1.00e-41 | 151 |
MS.gene045567.t1 | AT4G18020 | 34.336 | 399 | 188 | 14 | 19 | 406 | 191 | 526 | 9.95e-34 | 132 |
MS.gene045567.t1 | AT4G18020 | 34.336 | 399 | 188 | 14 | 19 | 406 | 191 | 526 | 9.95e-34 | 132 |
MS.gene045567.t1 | AT4G18020 | 34.336 | 399 | 188 | 14 | 19 | 406 | 191 | 526 | 9.95e-34 | 132 |
MS.gene045567.t1 | AT4G18020 | 34.336 | 399 | 188 | 14 | 19 | 406 | 191 | 526 | 9.95e-34 | 132 |
MS.gene045567.t1 | AT4G18020 | 34.336 | 399 | 188 | 14 | 19 | 406 | 191 | 526 | 9.95e-34 | 132 |
MS.gene045567.t1 | AT4G18020 | 35.600 | 250 | 131 | 8 | 19 | 259 | 191 | 419 | 2.38e-28 | 116 |
MS.gene045567.t1 | AT4G18020 | 35.600 | 250 | 131 | 8 | 19 | 259 | 191 | 419 | 2.38e-28 | 116 |
MS.gene045567.t1 | AT4G18020 | 35.600 | 250 | 131 | 8 | 19 | 259 | 191 | 419 | 2.38e-28 | 116 |
MS.gene045567.t1 | AT4G18020 | 35.600 | 250 | 131 | 8 | 19 | 259 | 191 | 419 | 2.38e-28 | 116 |
MS.gene045567.t1 | AT4G18020 | 35.600 | 250 | 131 | 8 | 19 | 259 | 191 | 419 | 2.38e-28 | 116 |
MS.gene045567.t1 | AT4G18020 | 35.600 | 250 | 131 | 8 | 19 | 259 | 191 | 419 | 2.38e-28 | 116 |
MS.gene045567.t1 | AT5G58080 | 55.738 | 61 | 27 | 0 | 136 | 196 | 192 | 252 | 2.92e-16 | 81.3 |
MS.gene045567.t1 | AT3G16857 | 44.565 | 92 | 38 | 1 | 118 | 196 | 134 | 225 | 8.44e-16 | 79.7 |
MS.gene045567.t1 | AT3G16857 | 44.565 | 92 | 38 | 1 | 118 | 196 | 204 | 295 | 9.76e-16 | 79.7 |
MS.gene045567.t1 | AT3G16857 | 44.565 | 92 | 38 | 1 | 118 | 196 | 204 | 295 | 1.07e-15 | 79.7 |
MS.gene045567.t1 | AT2G01760 | 53.125 | 64 | 30 | 0 | 133 | 196 | 130 | 193 | 1.69e-15 | 77.4 |
MS.gene045567.t1 | AT2G01760 | 53.125 | 64 | 30 | 0 | 133 | 196 | 195 | 258 | 3.28e-15 | 77.0 |
MS.gene045567.t1 | AT2G01760 | 53.125 | 64 | 30 | 0 | 133 | 196 | 223 | 286 | 3.81e-15 | 77.0 |
MS.gene045567.t1 | AT3G10760 | 51.667 | 60 | 29 | 0 | 137 | 196 | 104 | 163 | 3.84e-15 | 76.6 |
MS.gene045567.t1 | AT5G05090 | 51.667 | 60 | 29 | 0 | 137 | 196 | 80 | 139 | 4.50e-15 | 75.1 |
MS.gene045567.t1 | AT5G59570 | 41.892 | 74 | 43 | 0 | 140 | 213 | 143 | 216 | 8.92e-15 | 75.1 |
MS.gene045567.t1 | AT5G59570 | 41.892 | 74 | 43 | 0 | 140 | 213 | 143 | 216 | 8.92e-15 | 75.1 |
MS.gene045567.t1 | AT2G25180 | 50.000 | 62 | 31 | 0 | 135 | 196 | 192 | 253 | 1.31e-14 | 76.3 |
MS.gene045567.t1 | AT4G31920 | 49.206 | 63 | 32 | 0 | 128 | 190 | 173 | 235 | 1.58e-14 | 75.9 |
MS.gene045567.t1 | AT3G46640 | 46.479 | 71 | 36 | 1 | 137 | 205 | 143 | 213 | 1.95e-14 | 74.3 |
MS.gene045567.t1 | AT3G46640 | 46.479 | 71 | 36 | 1 | 137 | 205 | 143 | 213 | 1.95e-14 | 74.3 |
MS.gene045567.t1 | AT3G46640 | 46.479 | 71 | 36 | 1 | 137 | 205 | 143 | 213 | 3.79e-14 | 73.6 |
MS.gene045567.t1 | AT2G03500 | 36.154 | 130 | 74 | 2 | 130 | 250 | 225 | 354 | 5.25e-14 | 73.9 |
MS.gene045567.t1 | AT2G40970 | 50.877 | 57 | 28 | 0 | 140 | 196 | 107 | 163 | 8.32e-14 | 71.2 |
MS.gene045567.t1 | AT5G07210 | 47.945 | 73 | 34 | 1 | 134 | 206 | 218 | 286 | 1.17e-13 | 73.2 |
MS.gene045567.t1 | AT5G07210 | 47.945 | 73 | 34 | 1 | 134 | 206 | 226 | 294 | 1.21e-13 | 73.2 |
MS.gene045567.t1 | AT1G13300 | 43.333 | 90 | 47 | 3 | 106 | 194 | 152 | 238 | 7.88e-13 | 69.7 |
MS.gene045567.t1 | AT3G04030 | 57.692 | 52 | 21 | 1 | 140 | 190 | 47 | 98 | 1.63e-12 | 68.9 |
MS.gene045567.t1 | AT3G04030 | 57.692 | 52 | 21 | 1 | 140 | 190 | 47 | 98 | 1.85e-12 | 68.9 |
MS.gene045567.t1 | AT5G18240 | 59.259 | 54 | 21 | 1 | 138 | 190 | 45 | 98 | 2.65e-12 | 68.2 |
MS.gene045567.t1 | AT5G18240 | 59.259 | 54 | 21 | 1 | 138 | 190 | 45 | 98 | 2.65e-12 | 68.2 |
MS.gene045567.t1 | AT5G18240 | 59.259 | 54 | 21 | 1 | 138 | 190 | 45 | 98 | 2.94e-12 | 68.2 |
MS.gene045567.t1 | AT5G18240 | 59.259 | 54 | 21 | 1 | 138 | 190 | 45 | 98 | 2.94e-12 | 68.2 |
MS.gene045567.t1 | AT5G18240 | 59.259 | 54 | 21 | 1 | 138 | 190 | 45 | 98 | 2.94e-12 | 68.2 |
MS.gene045567.t1 | AT2G27070 | 49.180 | 61 | 31 | 0 | 137 | 197 | 224 | 284 | 7.17e-12 | 67.4 |
MS.gene045567.t1 | AT4G28610 | 32.773 | 119 | 69 | 2 | 76 | 193 | 173 | 281 | 1.20e-11 | 66.2 |
MS.gene045567.t1 | AT1G68670 | 37.037 | 108 | 63 | 2 | 116 | 218 | 193 | 300 | 1.24e-11 | 65.9 |
MS.gene045567.t1 | AT1G67710 | 33.884 | 121 | 70 | 2 | 86 | 196 | 67 | 187 | 1.84e-11 | 65.9 |
MS.gene045567.t1 | AT1G67710 | 33.884 | 121 | 70 | 2 | 86 | 196 | 58 | 178 | 2.14e-11 | 65.9 |
MS.gene045567.t1 | AT1G67710 | 33.884 | 121 | 70 | 2 | 86 | 196 | 132 | 252 | 3.05e-11 | 65.5 |
MS.gene045567.t1 | AT3G04030 | 52.941 | 51 | 24 | 0 | 140 | 190 | 47 | 97 | 3.14e-11 | 65.1 |
MS.gene045567.t1 | AT5G45580 | 53.846 | 52 | 23 | 1 | 140 | 190 | 9 | 60 | 8.10e-11 | 62.8 |
MS.gene045567.t1 | AT1G25550 | 41.892 | 74 | 42 | 1 | 123 | 195 | 194 | 267 | 8.18e-11 | 63.5 |
Find 132 sgRNAs with CRISPR-Local
Find 300 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGCGGTGCCTTCAAGGATTT+TGG | 0.160023 | 4.3:-30113342 | MS.gene045567:CDS |
CACCTCAAGATCCTTCATTT+TGG | 0.206831 | 4.3:-30112414 | MS.gene045567:CDS |
CCTTTCCGAAGGAAATTTAT+TGG | 0.220430 | 4.3:-30115012 | MS.gene045567:CDS |
CTTCTCTTCTACTTTGCTAT+TGG | 0.234724 | 4.3:+30114842 | None:intergenic |
TGGAGACATCTTGCCGGATT+TGG | 0.301151 | 4.3:-30114946 | MS.gene045567:CDS |
ATGCCATGGGGTGGGATGCC+GGG | 0.306670 | 4.3:+30110668 | None:intergenic |
AAACCCATGGTGGGTGCAGC+TGG | 0.319978 | 4.3:+30112592 | None:intergenic |
ATGGGGACATCCTTCAAATA+TGG | 0.339407 | 4.3:-30112506 | MS.gene045567:CDS |
GGCCGGATCATTGCGTTTGT+TGG | 0.342803 | 4.3:+30111015 | None:intergenic |
AACTTGCTGCTTCTGCTTCA+CGG | 0.345135 | 4.3:+30112677 | None:intergenic |
CATGCCATGGGGTGGGATGC+CGG | 0.361244 | 4.3:+30110667 | None:intergenic |
ATACATGTAAGGGTCTAAAA+TGG | 0.371409 | 4.3:+30112527 | None:intergenic |
ACAATTACAACGGGCGACTT+TGG | 0.378786 | 4.3:-30115038 | MS.gene045567:CDS |
CATTAGCACCCCTCCTGCTC+CGG | 0.386182 | 4.3:-30110627 | MS.gene045567:CDS |
CCAGCACTTGACAGCGTAAT+GGG | 0.391503 | 4.3:-30110084 | MS.gene045567:CDS |
ACAAATCTCCTGTGCAAGTC+TGG | 0.392453 | 4.3:+30113395 | None:intergenic |
GAGAGCATAGACGCAGCTAT+TGG | 0.399494 | 4.3:-30110156 | MS.gene045567:CDS |
GAGGAGGAGGAGGATGAGGG+GGG | 0.405733 | 4.3:+30112569 | None:intergenic |
GAGGATAAAACAAGCTGTTC+GGG | 0.406204 | 4.3:-30114801 | MS.gene045567:CDS |
TTAAAAGATGCAGGTGGAAA+AGG | 0.411700 | 4.3:-30114720 | MS.gene045567:CDS |
GATGAATTCTTCGGCGTCAC+TGG | 0.421305 | 4.3:-30114868 | MS.gene045567:CDS |
TGAGGATAAAACAAGCTGTT+CGG | 0.423559 | 4.3:-30114802 | MS.gene045567:CDS |
CATCTTGCCGGATTTGGTAA+TGG | 0.434128 | 4.3:-30114940 | MS.gene045567:CDS |
TAACATTGCTAGTCACCTTC+AGG | 0.436461 | 4.3:-30113288 | MS.gene045567:intron |
ATAATCTCCAAAATCCTTGA+AGG | 0.440155 | 4.3:+30113335 | None:intergenic |
CCCATTACGCTGTCAAGTGC+TGG | 0.441934 | 4.3:+30110084 | None:intergenic |
TGGATAAGGCGGTGCCTTCA+AGG | 0.442626 | 4.3:-30113349 | MS.gene045567:CDS |
GAGAACTCAGCAAACATCTC+TGG | 0.443524 | 4.3:+30114915 | None:intergenic |
ACCACTGTTGTCAGAGGTGG+TGG | 0.450953 | 4.3:+30110976 | None:intergenic |
TCTGGATCCATTACCAAATC+CGG | 0.454951 | 4.3:+30114933 | None:intergenic |
AACTTAGACGACTTCTTCGT+TGG | 0.455586 | 4.3:-30114981 | MS.gene045567:CDS |
GGTGGGAAACAATGTGTTCC+TGG | 0.458402 | 4.3:+30110994 | None:intergenic |
ATGGTGGGTGCAGCTGGCCA+TGG | 0.458606 | 4.3:+30112598 | None:intergenic |
GCTTTCCAATAAATTTCCTT+CGG | 0.459139 | 4.3:+30115007 | None:intergenic |
TTCGTTGGCATCAACGTCGA+TGG | 0.462791 | 4.3:-30114966 | MS.gene045567:CDS |
ACTTGCTGCTTCTGCTTCAC+GGG | 0.463107 | 4.3:+30112678 | None:intergenic |
CATGAGAGTGGCTGCGGTGT+AGG | 0.464099 | 4.3:+30112460 | None:intergenic |
AATCAAAGGAGACAAGTATA+TGG | 0.464153 | 4.3:-30112652 | MS.gene045567:CDS |
GAAGGTGACTAGCAATGTTA+TGG | 0.464906 | 4.3:+30113291 | None:intergenic |
GAATTCAAAGAAAGATTATG+AGG | 0.466750 | 4.3:-30114820 | MS.gene045567:CDS |
GGAACAGCTAGGGGTGGATA+AGG | 0.468079 | 4.3:-30113363 | MS.gene045567:CDS |
TGCCATGGGGTGGGATGCCG+GGG | 0.471359 | 4.3:+30110669 | None:intergenic |
AAGCAGCAAGTTGGAATCAA+AGG | 0.471928 | 4.3:-30112666 | MS.gene045567:CDS |
GCTGAGTTCTCCGTTAGTTA+CGG | 0.472120 | 4.3:-30114903 | MS.gene045567:CDS |
ATGGCCAGCTGCACCCACCA+TGG | 0.477260 | 4.3:-30112596 | MS.gene045567:CDS |
TGTTTATTGTGCAGGTGGAT+TGG | 0.477271 | 4.3:-30113421 | MS.gene045567:intron |
AGACAAGTATATGGTGGTGT+AGG | 0.478471 | 4.3:-30112643 | MS.gene045567:CDS |
GACAAGTATATGGTGGTGTA+GGG | 0.478876 | 4.3:-30112642 | MS.gene045567:CDS |
CTCCAACAAACGCAATGATC+CGG | 0.484765 | 4.3:-30111017 | MS.gene045567:CDS |
TGGCCAGCTGCACCCACCAT+GGG | 0.485571 | 4.3:-30112595 | MS.gene045567:CDS |
CGTCGATGGAGACATCTTGC+CGG | 0.485716 | 4.3:-30114952 | MS.gene045567:CDS |
TCCAGCACTTGACAGCGTAA+TGG | 0.488114 | 4.3:-30110085 | MS.gene045567:CDS |
CCATGGTTGCCACTACCACT+TGG | 0.489750 | 4.3:-30110117 | MS.gene045567:CDS |
AACATGCAGAGACCATCATT+TGG | 0.489976 | 4.3:-30110701 | MS.gene045567:intron |
GCCATATGAGGAGGAGGAGG+AGG | 0.492878 | 4.3:+30112559 | None:intergenic |
TCGAAGAAGTGACCCGGAGC+AGG | 0.493008 | 4.3:+30110614 | None:intergenic |
ATTAGCACCCCTCCTGCTCC+GGG | 0.495785 | 4.3:-30110626 | MS.gene045567:CDS |
GATCTGCTTTACACATGCCA+TGG | 0.496492 | 4.3:+30110654 | None:intergenic |
GGGAGTACTACAATTACAAC+GGG | 0.501212 | 4.3:-30115047 | MS.gene045567:CDS |
AGGATGTCCCCATACATGTA+AGG | 0.503004 | 4.3:+30112516 | None:intergenic |
AATCCATTGTTAAAAGATGC+AGG | 0.503364 | 4.3:-30114729 | MS.gene045567:CDS |
CCAATAAATTTCCTTCGGAA+AGG | 0.511123 | 4.3:+30115012 | None:intergenic |
ATCTGCTTTACACATGCCAT+GGG | 0.515933 | 4.3:+30110655 | None:intergenic |
GTGCAAGCTGTGGAACAGCT+AGG | 0.516110 | 4.3:-30113374 | MS.gene045567:CDS |
TTTCTTCATGCGCATGATGA+GGG | 0.518784 | 4.3:+30110027 | None:intergenic |
TGATTCCTCGCCGTAACTAA+CGG | 0.519226 | 4.3:+30114893 | None:intergenic |
GAAGGATCTTGAGGTGGTGG+AGG | 0.522935 | 4.3:+30112421 | None:intergenic |
GTTTCTTCATGCGCATGATG+AGG | 0.524498 | 4.3:+30110026 | None:intergenic |
GGAATCAGAGATGAATTCTT+CGG | 0.526908 | 4.3:-30114877 | MS.gene045567:CDS |
AATGAAGGATCTTGAGGTGG+TGG | 0.528793 | 4.3:+30112418 | None:intergenic |
GCTTTGAGTCCAAGTGGTAG+TGG | 0.528879 | 4.3:+30110108 | None:intergenic |
TCATTTGGATGTTCAATCCC+CGG | 0.528978 | 4.3:-30110686 | MS.gene045567:CDS |
TGCAAGCTGTGGAACAGCTA+GGG | 0.531741 | 4.3:-30113373 | MS.gene045567:CDS |
GAAGTGACCCGGAGCAGGAG+GGG | 0.531771 | 4.3:+30110619 | None:intergenic |
AAAGACTGGTCCATATTTGA+AGG | 0.536097 | 4.3:+30112496 | None:intergenic |
GGAAACAATGTGTTCCTGGC+CGG | 0.538523 | 4.3:+30110998 | None:intergenic |
AAAACAAGCTGTTCGGGTCA+AGG | 0.545941 | 4.3:-30114795 | MS.gene045567:CDS |
TGGTGCAATGGTGCCATATG+AGG | 0.549696 | 4.3:+30112547 | None:intergenic |
AGTAAATCTAAGAATCCTCA+AGG | 0.553031 | 4.3:-30114684 | MS.gene045567:CDS |
CTACACCGCAGCCACTCTCA+TGG | 0.554231 | 4.3:-30112459 | MS.gene045567:CDS |
AAGCTGTTCGGGTCAAGGCT+CGG | 0.557290 | 4.3:-30114790 | MS.gene045567:CDS |
GCTTTACACATGCCATGGGG+TGG | 0.557961 | 4.3:+30110659 | None:intergenic |
GGGATTGAACATCCAAATGA+TGG | 0.560682 | 4.3:+30110689 | None:intergenic |
TTGGCATTCTCACCACCAGC+AGG | 0.563830 | 4.3:-30112395 | MS.gene045567:intron |
GACTTTGGAGACCTTTCCGA+AGG | 0.563967 | 4.3:-30115023 | MS.gene045567:CDS |
AAGAAGTGACCCGGAGCAGG+AGG | 0.566353 | 4.3:+30110617 | None:intergenic |
GTGAAGCAGAAGCAGCAAGT+TGG | 0.569622 | 4.3:-30112675 | MS.gene045567:CDS |
TGCCAAAATGAAGGATCTTG+AGG | 0.576157 | 4.3:+30112412 | None:intergenic |
GCCACATGTGCATAAAAGAC+TGG | 0.577659 | 4.3:+30112482 | None:intergenic |
CTTTACACATGCCATGGGGT+GGG | 0.577896 | 4.3:+30110660 | None:intergenic |
ATCCCCGGCATCCCACCCCA+TGG | 0.583757 | 4.3:-30110671 | MS.gene045567:CDS |
GGTGCCATATGAGGAGGAGG+AGG | 0.584245 | 4.3:+30112556 | None:intergenic |
GGATGTCCCCATACATGTAA+GGG | 0.590827 | 4.3:+30112517 | None:intergenic |
CCAAGTGGTAGTGGCAACCA+TGG | 0.591902 | 4.3:+30110117 | None:intergenic |
AATGGTGCCATATGAGGAGG+AGG | 0.593332 | 4.3:+30112553 | None:intergenic |
GGTGTCCATGAGAGTGGCTG+CGG | 0.595402 | 4.3:+30112454 | None:intergenic |
ACAAACGCAATGATCCGGCC+AGG | 0.598703 | 4.3:-30111012 | MS.gene045567:CDS |
ATTGGACACCAGACTTGCAC+AGG | 0.600253 | 4.3:-30113403 | MS.gene045567:CDS |
TTTAGACCCTTACATGTATG+GGG | 0.601372 | 4.3:-30112523 | MS.gene045567:CDS |
CTTCATGCGCATGATGAGGG+TGG | 0.603283 | 4.3:+30110030 | None:intergenic |
GCCACTCTCATGGACACCAT+CGG | 0.612134 | 4.3:-30112449 | MS.gene045567:CDS |
ACAGCTAGGGGTGGATAAGG+CGG | 0.613952 | 4.3:-30113360 | MS.gene045567:CDS |
AGCTGTGGAACAGCTAGGGG+TGG | 0.616303 | 4.3:-30113369 | MS.gene045567:CDS |
AGAAGTGACCCGGAGCAGGA+GGG | 0.626071 | 4.3:+30110618 | None:intergenic |
AGAGAGAAGTGATAAGTCCA+TGG | 0.627291 | 4.3:-30112615 | MS.gene045567:CDS |
TCAAGGGAAGAGAAAAGTCA+AGG | 0.631578 | 4.3:-30114667 | MS.gene045567:intron |
GGCATGTGTAAAGCAGATCA+CGG | 0.631742 | 4.3:-30110650 | MS.gene045567:CDS |
CAGGAGATTTGTGCAAGCTG+TGG | 0.634615 | 4.3:-30113384 | MS.gene045567:CDS |
ACAAGTATATGGTGGTGTAG+GGG | 0.636855 | 4.3:-30112641 | MS.gene045567:CDS |
TGGTGAGAATGCCAAAATGA+AGG | 0.637260 | 4.3:+30112403 | None:intergenic |
TGGAAGTCGAAGAAGTGACC+CGG | 0.638246 | 4.3:+30110608 | None:intergenic |
GAGATGTTATATCAAAACCA+TGG | 0.638865 | 4.3:-30110134 | MS.gene045567:CDS |
ACCGATGGTGTCCATGAGAG+TGG | 0.639166 | 4.3:+30112448 | None:intergenic |
GTTACCACTGTTGTCAGAGG+TGG | 0.641294 | 4.3:+30110973 | None:intergenic |
CAAAGGAGACAAGTATATGG+TGG | 0.641945 | 4.3:-30112649 | MS.gene045567:CDS |
GTAAATCTAAGAATCCTCAA+GGG | 0.653344 | 4.3:-30114683 | MS.gene045567:CDS |
ATAGTTACCACTGTTGTCAG+AGG | 0.658785 | 4.3:+30110970 | None:intergenic |
ATGGGTGAATTACAAAGACA+AGG | 0.660872 | 4.3:-30110066 | MS.gene045567:CDS |
TAGAGAGAGCTACCTGCTGG+TGG | 0.667063 | 4.3:+30112383 | None:intergenic |
GGGGAGTACTACAATTACAA+CGG | 0.686337 | 4.3:-30115048 | MS.gene045567:CDS |
GCAAGCTGTGGAACAGCTAG+GGG | 0.688218 | 4.3:-30113372 | MS.gene045567:CDS |
GGTGGTGGAGGAGCTACCGA+TGG | 0.688749 | 4.3:+30112433 | None:intergenic |
GAGTAAAAGAGATGAATCTG+TGG | 0.689938 | 4.3:-30114757 | MS.gene045567:CDS |
GCTGGAGCTTTGAGTCCAAG+TGG | 0.690127 | 4.3:+30110102 | None:intergenic |
AAGGGTCTAAAATGGTGCAA+TGG | 0.690674 | 4.3:+30112535 | None:intergenic |
GTTCTCCGTTAGTTACGGCG+AGG | 0.691247 | 4.3:-30114898 | MS.gene045567:CDS |
CCACTGTTGTCAGAGGTGGT+GGG | 0.703169 | 4.3:+30110977 | None:intergenic |
CAAAATGAAGGATCTTGAGG+TGG | 0.718294 | 4.3:+30112415 | None:intergenic |
CCCACCACCTCTGACAACAG+TGG | 0.721504 | 4.3:-30110977 | MS.gene045567:intron |
TGCAATGGTGCCATATGAGG+AGG | 0.727370 | 4.3:+30112550 | None:intergenic |
CCATTGTTAAAAGATGCAGG+TGG | 0.735818 | 4.3:-30114726 | MS.gene045567:CDS |
TCTGCTTTACACATGCCATG+GGG | 0.759671 | 4.3:+30110656 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATCAAAATTCAATTTAATT+AGG | - | chr4.3:30113927-30113946 | MS.gene045567:intron | 10.0% |
!! | ATTCATAAATTGAAATATAT+TGG | - | chr4.3:30113078-30113097 | MS.gene045567:intron | 10.0% |
!! | TACTACTATTATTATTAAAT+AGG | - | chr4.3:30111011-30111030 | MS.gene045567:CDS | 10.0% |
!! | TTACTCTTAAAAAAAATTAA+TGG | + | chr4.3:30111589-30111608 | None:intergenic | 10.0% |
!! | TTATTTAACTATTAAACTAA+AGG | - | chr4.3:30113501-30113520 | MS.gene045567:intron | 10.0% |
!!! | AAAATGATAGTTAATTTTAT+TGG | + | chr4.3:30113121-30113140 | None:intergenic | 10.0% |
!!! | AAATGAAAGTATTTAATTTT+AGG | - | chr4.3:30111138-30111157 | MS.gene045567:intron | 10.0% |
!!! | CTTAAAGAAATAAAATTTTA+TGG | - | chr4.3:30111089-30111108 | MS.gene045567:intron | 10.0% |
!!! | TTTATTCTGTTTTTATAATT+AGG | + | chr4.3:30110648-30110667 | None:intergenic | 10.0% |
!!! | TTTATTTAACTATTTTTTTG+TGG | - | chr4.3:30113417-30113436 | MS.gene045567:intron | 10.0% |
!! | ACAAATTACTGAAATAATTA+AGG | + | chr4.3:30112988-30113007 | None:intergenic | 15.0% |
!! | AGAAACAAAAAAATAAGTTA+AGG | - | chr4.3:30111393-30111412 | MS.gene045567:intron | 15.0% |
!! | CAAATTACTGAAATAATTAA+GGG | + | chr4.3:30112987-30113006 | None:intergenic | 15.0% |
!! | GAAACAAAAAAATAAGTTAA+GGG | - | chr4.3:30111394-30111413 | MS.gene045567:intron | 15.0% |
!! | GTATTTATATATAAATTGTG+AGG | + | chr4.3:30110991-30111010 | None:intergenic | 15.0% |
!!! | AACTTTTAGGTTTTTATATT+GGG | + | chr4.3:30114838-30114857 | None:intergenic | 15.0% |
!!! | AACTTTTTATTGCATTTTTT+CGG | - | chr4.3:30110827-30110846 | MS.gene045567:intron | 15.0% |
!!! | ACAATTAAGATTTTAAACTT+TGG | - | chr4.3:30112951-30112970 | MS.gene045567:intron | 15.0% |
!!! | CAATTAAGATTTTAAACTTT+GGG | - | chr4.3:30112952-30112971 | MS.gene045567:intron | 15.0% |
!!! | CTATGATATTAAACTATTTT+TGG | - | chr4.3:30113770-30113789 | MS.gene045567:intron | 15.0% |
!!! | TAAATTTATTTTACAGTCAA+AGG | - | chr4.3:30114919-30114938 | MS.gene045567:CDS | 15.0% |
!!! | TAACTTTTAGGTTTTTATAT+TGG | + | chr4.3:30114839-30114858 | None:intergenic | 15.0% |
!!! | TAATATGATGACAATTTTTA+CGG | + | chr4.3:30113563-30113582 | None:intergenic | 15.0% |
!!! | TAGTGAATAATTTTTTTTGT+TGG | + | chr4.3:30113289-30113308 | None:intergenic | 15.0% |
!!! | TATATTGAGCATAATTTTTT+AGG | - | chr4.3:30112145-30112164 | MS.gene045567:intron | 15.0% |
!!! | TTTTATTATTGCAGAAATAT+AGG | - | chr4.3:30112374-30112393 | MS.gene045567:intron | 15.0% |
!! | AAAAAAAAACAAGAAGAACT+AGG | - | chr4.3:30113828-30113847 | MS.gene045567:intron | 20.0% |
!! | AAGTTATTAACGTTACAATT+TGG | - | chr4.3:30111215-30111234 | MS.gene045567:intron | 20.0% |
!! | AAGTTATTAACGTTACAATT+TGG | + | chr4.3:30111234-30111215 | None:intergenic | 20.0% |
!! | ATAGTTTAATATCATAGCAA+TGG | + | chr4.3:30113767-30113786 | None:intergenic | 20.0% |
!! | ATATAAATTGTGAGGATATT+TGG | + | chr4.3:30110983-30111002 | None:intergenic | 20.0% |
!! | ATGAAAACTGAAATTGATAA+AGG | - | chr4.3:30111920-30111939 | MS.gene045567:intron | 20.0% |
!! | ATTGTAACGTTAATAACTTA+TGG | + | chr4.3:30111472-30111453 | None:intergenic | 20.0% |
!! | CAAATTCGTTAAAAACAATA+AGG | - | chr4.3:30112825-30112844 | MS.gene045567:intron | 20.0% |
!! | GAAACCAAAAAATAAGTTAA+GGG | + | chr4.3:30111302-30111321 | None:intergenic | 20.0% |
!! | GAAACCAAAAATTAAGTTAA+GGG | - | chr4.3:30111425-30111444 | MS.gene045567:intron | 20.0% |
!! | GTCATCATATTATTATGTAT+TGG | - | chr4.3:30113571-30113590 | MS.gene045567:intron | 20.0% |
!! | TAAAAGTTACATAGATTTGA+AGG | - | chr4.3:30114850-30114869 | MS.gene045567:CDS | 20.0% |
!! | TAAATTTGAATTGTTACACA+TGG | + | chr4.3:30110870-30110889 | None:intergenic | 20.0% |
!! | TCTATAATATAACGAACAAA+TGG | + | chr4.3:30113044-30113063 | None:intergenic | 20.0% |
!! | TGACATTTCGTTAATTTATT+GGG | - | chr4.3:30111871-30111890 | MS.gene045567:intron | 20.0% |
!! | TTCACCAACATATATAAATA+TGG | - | chr4.3:30114259-30114278 | MS.gene045567:intron | 20.0% |
!! | TTGACATTTCGTTAATTTAT+TGG | - | chr4.3:30111870-30111889 | MS.gene045567:intron | 20.0% |
!! | TTGTAACGTTAATAACTTAT+GGG | + | chr4.3:30111473-30111454 | None:intergenic | 20.0% |
!! | TTTAGGCTTAATTAATGATT+TGG | - | chr4.3:30111155-30111174 | MS.gene045567:intron | 20.0% |
!!! | AATTTAGATGCTATTTTAAG+TGG | + | chr4.3:30112741-30112760 | None:intergenic | 20.0% |
!!! | ATTACATCACTTTACTATTT+TGG | - | chr4.3:30114152-30114171 | MS.gene045567:intron | 20.0% |
!!! | ATTTAACTATTTTTTTGTGG+TGG | - | chr4.3:30113420-30113439 | MS.gene045567:intron | 20.0% |
!!! | TAATGGCTTAATTACTATTT+TGG | + | chr4.3:30111572-30111591 | None:intergenic | 20.0% |
!!! | TGGTTTTAAAATCTTTTTCT+AGG | + | chr4.3:30113747-30113766 | None:intergenic | 20.0% |
!!! | TTCAAATCTATGTAACTTTT+AGG | + | chr4.3:30114851-30114870 | None:intergenic | 20.0% |
!!! | TTCAGTAATTTGTATTTGAT+AGG | - | chr4.3:30112995-30113014 | MS.gene045567:intron | 20.0% |
!!! | TTTGTCGACTTTTATATTAT+CGG | - | chr4.3:30113158-30113177 | MS.gene045567:intron | 20.0% |
! | AAAAATCGTCTTATAAAGTG+AGG | + | chr4.3:30114801-30114820 | None:intergenic | 25.0% |
! | AAAATCGTCTTATAAAGTGA+GGG | + | chr4.3:30114800-30114819 | None:intergenic | 25.0% |
! | AGTACTATTATCGAATGATA+TGG | + | chr4.3:30112766-30112785 | None:intergenic | 25.0% |
! | AGTATTCAACTATATGTAGT+TGG | + | chr4.3:30113803-30113822 | None:intergenic | 25.0% |
! | AGTCAAGGTATACTTAAATA+AGG | - | chr4.3:30110445-30110464 | MS.gene045567:intron | 25.0% |
! | CCTTAACTCTAATAACATAA+AGG | + | chr4.3:30111365-30111384 | None:intergenic | 25.0% |
! | CCTTTATGTTATTAGAGTTA+AGG | - | chr4.3:30111362-30111381 | MS.gene045567:intron | 25.0% |
! | CGAAACCAAAAAATAAGTTA+AGG | + | chr4.3:30111303-30111322 | None:intergenic | 25.0% |
! | CGAAACCAAAAATTAAGTTA+AGG | - | chr4.3:30111424-30111443 | MS.gene045567:intron | 25.0% |
! | CTAAGTGGTTTATCTTAATT+TGG | - | chr4.3:30110490-30110509 | MS.gene045567:intron | 25.0% |
! | CTATACTCCATATATAAGTT+TGG | - | chr4.3:30114345-30114364 | MS.gene045567:intron | 25.0% |
! | GAATTCAAAGAAAGATTATG+AGG | - | chr4.3:30110277-30110296 | MS.gene045567:intron | 25.0% |
! | GTAACCAACAAATAACTTAA+GGG | - | chr4.3:30111485-30111504 | MS.gene045567:intron | 25.0% |
! | GTAACCAACAAATAACTTAA+GGG | + | chr4.3:30111504-30111485 | None:intergenic | 25.0% |
! | GTACTATTATCGAATGATAT+GGG | + | chr4.3:30112765-30112784 | None:intergenic | 25.0% |
! | GTGTAACAATTCAAATTTAC+CGG | - | chr4.3:30110871-30110890 | MS.gene045567:intron | 25.0% |
! | TACTATTATCGAATGATATG+GGG | + | chr4.3:30112764-30112783 | None:intergenic | 25.0% |
! | TATCAATCTTGTATGTGAAA+AGG | + | chr4.3:30114214-30114233 | None:intergenic | 25.0% |
! | TATGAAAAAAATGTTAGCAG+TGG | - | chr4.3:30110794-30110813 | MS.gene045567:intron | 25.0% |
! | TCATTAATCTATGTGAAACT+CGG | + | chr4.3:30114749-30114768 | None:intergenic | 25.0% |
! | TGTAACCAACAAATAACTTA+AGG | - | chr4.3:30111484-30111503 | MS.gene045567:intron | 25.0% |
! | TGTAACCAACAAATAACTTA+AGG | + | chr4.3:30111503-30111484 | None:intergenic | 25.0% |
! | TGTATGTATGTATGTATGTA+TGG | + | chr4.3:30114536-30114555 | None:intergenic | 25.0% |
! | TGTGCCATATTTATATATGT+TGG | + | chr4.3:30114266-30114285 | None:intergenic | 25.0% |
! | TTTGCTTACTCATTGTAATT+AGG | - | chr4.3:30110934-30110953 | MS.gene045567:intron | 25.0% |
!! | ATTTTGCATATTACATGTCT+TGG | - | chr4.3:30111115-30111134 | MS.gene045567:intron | 25.0% |
!! | TTGTCTTCTACTTTGAATTT+TGG | - | chr4.3:30114186-30114205 | MS.gene045567:intron | 25.0% |
!!! | ATGAAGTTCTTTTTTTAACG+AGG | + | chr4.3:30113660-30113679 | None:intergenic | 25.0% |
!!! | CACTATTTATCAAGTTTTGA+TGG | - | chr4.3:30112097-30112116 | MS.gene045567:intron | 25.0% |
!!! | CTTAATTTTTGGTTTCGTTT+TGG | + | chr4.3:30111421-30111440 | None:intergenic | 25.0% |
!!! | CTTATTTTTTGGTTTCGTTT+TGG | - | chr4.3:30111306-30111325 | MS.gene045567:intron | 25.0% |
!!! | GAATTGCTATTTAAGTTCAA+AGG | + | chr4.3:30111060-30111079 | None:intergenic | 25.0% |
!!! | GTTATGTTATTTTCGTCTAT+TGG | + | chr4.3:30114379-30114398 | None:intergenic | 25.0% |
!!! | GTTATTTGTTGGTTACATTT+TGG | - | chr4.3:30111186-30111205 | MS.gene045567:intron | 25.0% |
!!! | GTTATTTGTTGGTTACATTT+TGG | + | chr4.3:30111205-30111186 | None:intergenic | 25.0% |
AACGAATCATGTAATTACTC+AGG | + | chr4.3:30114876-30114895 | None:intergenic | 30.0% | |
AAGCTTAATTGTTAAGCATG+AGG | - | chr4.3:30114709-30114728 | MS.gene045567:CDS | 30.0% | |
AAGGACATGTGTTTATAAGT+GGG | - | chr4.3:30114579-30114598 | MS.gene045567:intron | 30.0% | |
AATCAAAGGAGACAAGTATA+TGG | - | chr4.3:30112445-30112464 | MS.gene045567:CDS | 30.0% | |
AATCCATTGTTAAAAGATGC+AGG | - | chr4.3:30110368-30110387 | MS.gene045567:intron | 30.0% | |
AATTAGTGTGTTTATTGTGC+AGG | - | chr4.3:30111668-30111687 | MS.gene045567:intron | 30.0% | |
AGCTTAATTGTTAAGCATGA+GGG | - | chr4.3:30114710-30114729 | MS.gene045567:CDS | 30.0% | |
AGTAAATCTAAGAATCCTCA+AGG | - | chr4.3:30110413-30110432 | MS.gene045567:intron | 30.0% | |
ATAATCTCCAAAATCCTTGA+AGG | + | chr4.3:30111765-30111784 | None:intergenic | 30.0% | |
ATACATGTAAGGGTCTAAAA+TGG | + | chr4.3:30112573-30112592 | None:intergenic | 30.0% | |
CAAGAAACTCTAATGTCTTA+TGG | + | chr4.3:30113707-30113726 | None:intergenic | 30.0% | |
CTAGAAAATTCGATATGTAC+CGG | + | chr4.3:30113536-30113555 | None:intergenic | 30.0% | |
CTATTTGCCATAATTTAAGG+AGG | + | chr4.3:30112278-30112297 | None:intergenic | 30.0% | |
CTTGGTACGTGAATATAAAT+CGG | + | chr4.3:30114692-30114711 | None:intergenic | 30.0% | |
GAATTTCAAATAGGAGACAA+AGG | - | chr4.3:30111839-30111858 | MS.gene045567:intron | 30.0% | |
GAGATGTTATATCAAAACCA+TGG | - | chr4.3:30114963-30114982 | MS.gene045567:CDS | 30.0% | |
GCACTATTTGCCATAATTTA+AGG | + | chr4.3:30112281-30112300 | None:intergenic | 30.0% | |
GCTTTCCAATAAATTTCCTT+CGG | + | chr4.3:30110093-30110112 | None:intergenic | 30.0% | |
GGTACATACGAATTTCAAAT+AGG | - | chr4.3:30111830-30111849 | MS.gene045567:intron | 30.0% | |
GTAAATCTAAGAATCCTCAA+GGG | - | chr4.3:30110414-30110433 | MS.gene045567:intron | 30.0% | |
TAAGGACATGTGTTTATAAG+TGG | - | chr4.3:30114578-30114597 | MS.gene045567:intron | 30.0% | |
TCATGCTTAACAATTAAGCT+TGG | + | chr4.3:30114710-30114729 | None:intergenic | 30.0% | |
! | ATTTTAGACCCTTACATGTA+TGG | - | chr4.3:30112572-30112591 | MS.gene045567:CDS | 30.0% |
! | CAGACACTATAATTTGTCAA+GGG | + | chr4.3:30110599-30110618 | None:intergenic | 30.0% |
! | GTTATTTGTTGGTTACATCT+TGG | - | chr4.3:30111246-30111265 | MS.gene045567:intron | 30.0% |
! | TCAGACACTATAATTTGTCA+AGG | + | chr4.3:30110600-30110619 | None:intergenic | 30.0% |
! | TGGTCCCTTAACTTAATTTT+TGG | + | chr4.3:30111432-30111451 | None:intergenic | 30.0% |
! | TTTTAGACCCTTACATGTAT+GGG | - | chr4.3:30112573-30112592 | MS.gene045567:CDS | 30.0% |
!! | TCAAGGATTTTGGAGATTAT+GGG | - | chr4.3:30111765-30111784 | MS.gene045567:intron | 30.0% |
!! | TTCAAGGATTTTGGAGATTA+TGG | - | chr4.3:30111764-30111783 | MS.gene045567:intron | 30.0% |
!!! | AGAGTTTTATTCTTGCTAAG+TGG | - | chr4.3:30110475-30110494 | MS.gene045567:intron | 30.0% |
!!! | TGGTCCCTTAACTTATTTTT+TGG | - | chr4.3:30111295-30111314 | MS.gene045567:intron | 30.0% |
AAAGTAGAAGACAATGTGCA+TGG | + | chr4.3:30114180-30114199 | None:intergenic | 35.0% | |
AATAACATAAAGGACCAGAG+TGG | + | chr4.3:30111355-30111374 | None:intergenic | 35.0% | |
AGCCATACCTCCTTAAATTA+TGG | - | chr4.3:30112268-30112287 | MS.gene045567:intron | 35.0% | |
AGGACATGTGTTTATAAGTG+GGG | - | chr4.3:30114580-30114599 | MS.gene045567:intron | 35.0% | |
ATGGGTGAATTACAAAGACA+AGG | - | chr4.3:30115031-30115050 | MS.gene045567:CDS | 35.0% | |
CAGTCAGCCAAACTTATATA+TGG | + | chr4.3:30114355-30114374 | None:intergenic | 35.0% | |
CCAATAAATTTCCTTCGGAA+AGG | + | chr4.3:30110088-30110107 | None:intergenic | 35.0% | |
CCTTTCCGAAGGAAATTTAT+TGG | - | chr4.3:30110085-30110104 | MS.gene045567:CDS | 35.0% | |
GAGTAAAAGAGATGAATCTG+TGG | - | chr4.3:30110340-30110359 | MS.gene045567:intron | 35.0% | |
GCAATTGTTCAAAATTTCGC+TGG | - | chr4.3:30110680-30110699 | MS.gene045567:CDS | 35.0% | |
GGAATCAGAGATGAATTCTT+CGG | - | chr4.3:30110220-30110239 | MS.gene045567:intron | 35.0% | |
TGAAATTCGTATGTACCTGA+AGG | + | chr4.3:30111827-30111846 | None:intergenic | 35.0% | |
TGAGGATAAAACAAGCTGTT+CGG | - | chr4.3:30110295-30110314 | MS.gene045567:intron | 35.0% | |
TGCCATAATTTAAGGAGGTA+TGG | + | chr4.3:30112273-30112292 | None:intergenic | 35.0% | |
TGGTCCCTTAAGTTATTTGT+TGG | - | chr4.3:30111175-30111194 | MS.gene045567:intron | 35.0% | |
TGGTCCCTTAAGTTATTTGT+TGG | + | chr4.3:30111194-30111175 | None:intergenic | 35.0% | |
TTAAAAGATGCAGGTGGAAA+AGG | - | chr4.3:30110377-30110396 | MS.gene045567:intron | 35.0% | |
TTACCCTCAAAGATGTATAC+CGG | + | chr4.3:30110893-30110912 | None:intergenic | 35.0% | |
TTACCGGTATACATCTTTGA+GGG | - | chr4.3:30110887-30110906 | MS.gene045567:intron | 35.0% | |
TTTACCGGTATACATCTTTG+AGG | - | chr4.3:30110886-30110905 | MS.gene045567:intron | 35.0% | |
TTTAGACCCTTACATGTATG+GGG | - | chr4.3:30112574-30112593 | MS.gene045567:CDS | 35.0% | |
! | AAAGACTGGTCCATATTTGA+AGG | + | chr4.3:30112604-30112623 | None:intergenic | 35.0% |
! | ATAATTTAAGGAGGTATGGC+TGG | + | chr4.3:30112269-30112288 | None:intergenic | 35.0% |
! | CTTCTCTTCTACTTTGCTAT+TGG | + | chr4.3:30110258-30110277 | None:intergenic | 35.0% |
! | TGTTAAGCATGAGGGTATAT+TGG | - | chr4.3:30114718-30114737 | MS.gene045567:CDS | 35.0% |
!! | CAGTACTAACCTTTTAGCTA+AGG | - | chr4.3:30110548-30110567 | MS.gene045567:intron | 35.0% |
!! | CATCTTTGAGGGTAATTTTG+AGG | - | chr4.3:30110898-30110917 | MS.gene045567:intron | 35.0% |
!! | CGATATCAGAATATCGATTC+AGG | - | chr4.3:30114660-30114679 | MS.gene045567:intron | 35.0% |
!! | GAAAGAAATTCAGTACTGGT+TGG | + | chr4.3:30114512-30114531 | None:intergenic | 35.0% |
!!! | AACTATTTTTTTGTGGTGGC+CGG | - | chr4.3:30113424-30113443 | MS.gene045567:intron | 35.0% |
AAACTAAAGGCCAAACGTAC+CGG | - | chr4.3:30113514-30113533 | MS.gene045567:intron | 40.0% | |
AACATGCAGAGACCATCATT+TGG | - | chr4.3:30114396-30114415 | MS.gene045567:intron | 40.0% | |
AACTTAGACGACTTCTTCGT+TGG | - | chr4.3:30110116-30110135 | MS.gene045567:CDS | 40.0% | |
AGAGAGAAGTGATAAGTCCA+TGG | - | chr4.3:30112482-30112501 | MS.gene045567:CDS | 40.0% | |
AGCTTGTCTAAAGAGCTCAT+AGG | - | chr4.3:30110619-30110638 | MS.gene045567:CDS | 40.0% | |
ATAGTTACCACTGTTGTCAG+AGG | + | chr4.3:30114130-30114149 | None:intergenic | 40.0% | |
ATCTGCTTTACACATGCCAT+GGG | + | chr4.3:30114445-30114464 | None:intergenic | 40.0% | |
ATGGGGACATCCTTCAAATA+TGG | - | chr4.3:30112591-30112610 | MS.gene045567:CDS | 40.0% | |
CAAAATGAAGGATCTTGAGG+TGG | + | chr4.3:30112685-30112704 | None:intergenic | 40.0% | |
CAAAGGAGACAAGTATATGG+TGG | - | chr4.3:30112448-30112467 | MS.gene045567:CDS | 40.0% | |
CCATTGTTAAAAGATGCAGG+TGG | - | chr4.3:30110371-30110390 | MS.gene045567:intron | 40.0% | |
GAAGGTGACTAGCAATGTTA+TGG | + | chr4.3:30111809-30111828 | None:intergenic | 40.0% | |
GAGGATAAAACAAGCTGTTC+GGG | - | chr4.3:30110296-30110315 | MS.gene045567:intron | 40.0% | |
GAGTCTGTTGATCACAGAAA+TGG | + | chr4.3:30114063-30114082 | None:intergenic | 40.0% | |
GGGATTGAACATCCAAATGA+TGG | + | chr4.3:30114411-30114430 | None:intergenic | 40.0% | |
GTACGTGTACGATGTCTTTA+TGG | - | chr4.3:30112050-30112069 | MS.gene045567:intron | 40.0% | |
GTGACAGAACCTTAGCTAAA+AGG | + | chr4.3:30110560-30110579 | None:intergenic | 40.0% | |
TAACATTGCTAGTCACCTTC+AGG | - | chr4.3:30111809-30111828 | MS.gene045567:intron | 40.0% | |
TAGTGTGTTTATTGTGCAGG+TGG | - | chr4.3:30111671-30111690 | MS.gene045567:intron | 40.0% | |
TCAAGGGAAGAGAAAAGTCA+AGG | - | chr4.3:30110430-30110449 | MS.gene045567:intron | 40.0% | |
TCATTTGGATGTTCAATCCC+CGG | - | chr4.3:30114411-30114430 | MS.gene045567:intron | 40.0% | |
TCTGGATCCATTACCAAATC+CGG | + | chr4.3:30110167-30110186 | None:intergenic | 40.0% | |
TGCCAAAATGAAGGATCTTG+AGG | + | chr4.3:30112688-30112707 | None:intergenic | 40.0% | |
TGGCGAAAGAAATTCAGTAC+TGG | + | chr4.3:30114516-30114535 | None:intergenic | 40.0% | |
TGGTGAGAATGCCAAAATGA+AGG | + | chr4.3:30112697-30112716 | None:intergenic | 40.0% | |
TGTTTATTGTGCAGGTGGAT+TGG | - | chr4.3:30111676-30111695 | MS.gene045567:intron | 40.0% | |
! | AAGCAGCAAGTTGGAATCAA+AGG | - | chr4.3:30112431-30112450 | MS.gene045567:CDS | 40.0% |
! | AAGGGTCTAAAATGGTGCAA+TGG | + | chr4.3:30112565-30112584 | None:intergenic | 40.0% |
! | ACAAGTATATGGTGGTGTAG+GGG | - | chr4.3:30112456-30112475 | MS.gene045567:CDS | 40.0% |
! | ACCAGTCTTTTATGCACATG+TGG | - | chr4.3:30112614-30112633 | MS.gene045567:CDS | 40.0% |
! | AGACAAGTATATGGTGGTGT+AGG | - | chr4.3:30112454-30112473 | MS.gene045567:CDS | 40.0% |
! | CACCTCAAGATCCTTCATTT+TGG | - | chr4.3:30112683-30112702 | MS.gene045567:CDS | 40.0% |
! | CCACCTGCATCTTTTAACAA+TGG | + | chr4.3:30110374-30110393 | None:intergenic | 40.0% |
! | GACAAGTATATGGTGGTGTA+GGG | - | chr4.3:30112455-30112474 | MS.gene045567:CDS | 40.0% |
! | TGAGTTTAGCTCAGTTGGTA+GGG | + | chr4.3:30113473-30113492 | None:intergenic | 40.0% |
! | TTGACTTTTCTCTTCCCTTG+AGG | + | chr4.3:30110431-30110450 | None:intergenic | 40.0% |
!! | AGTGTCTCGTGCACTTTTTA+AGG | + | chr4.3:30111628-30111647 | None:intergenic | 40.0% |
!! | GGGAGTACTACAATTACAAC+GGG | - | chr4.3:30110050-30110069 | MS.gene045567:CDS | 40.0% |
!! | GGGGAGTACTACAATTACAA+CGG | - | chr4.3:30110049-30110068 | MS.gene045567:CDS | 40.0% |
!!! | ACTATTTTTTTGTGGTGGCC+GGG | - | chr4.3:30113425-30113444 | MS.gene045567:intron | 40.0% |
AAAACAAGCTGTTCGGGTCA+AGG | - | chr4.3:30110302-30110321 | MS.gene045567:intron | 45.0% | |
AATGAAGGATCTTGAGGTGG+TGG | + | chr4.3:30112682-30112701 | None:intergenic | 45.0% | |
ACAAATCTCCTGTGCAAGTC+TGG | + | chr4.3:30111705-30111724 | None:intergenic | 45.0% | |
ACAATTACAACGGGCGACTT+TGG | - | chr4.3:30110059-30110078 | MS.gene045567:CDS | 45.0% | |
AGGATGTCCCCATACATGTA+AGG | + | chr4.3:30112584-30112603 | None:intergenic | 45.0% | |
CATCGCATCACAGGTTATGT+AGG | - | chr4.3:30114606-30114625 | MS.gene045567:intron | 45.0% | |
CTCCAACAAACGCAATGATC+CGG | - | chr4.3:30114080-30114099 | MS.gene045567:intron | 45.0% | |
GAGAACTCAGCAAACATCTC+TGG | + | chr4.3:30110185-30110204 | None:intergenic | 45.0% | |
GATCTGCTTTACACATGCCA+TGG | + | chr4.3:30114446-30114465 | None:intergenic | 45.0% | |
GCCACATGTGCATAAAAGAC+TGG | + | chr4.3:30112618-30112637 | None:intergenic | 45.0% | |
GCTGAGTTCTCCGTTAGTTA+CGG | - | chr4.3:30110194-30110213 | MS.gene045567:intron | 45.0% | |
GGATGTCCCCATACATGTAA+GGG | + | chr4.3:30112583-30112602 | None:intergenic | 45.0% | |
GGCATGTGTAAAGCAGATCA+CGG | - | chr4.3:30114447-30114466 | MS.gene045567:intron | 45.0% | |
TAAAGGACCAGAGTGGTTGA+CGG | + | chr4.3:30111348-30111367 | None:intergenic | 45.0% | |
TACTTGCACGAGAGACGATA+AGG | - | chr4.3:30114560-30114579 | MS.gene045567:intron | 45.0% | |
TAGGATCTTCATCTCTGACG+AGG | - | chr4.3:30110953-30110972 | MS.gene045567:intron | 45.0% | |
TCTGCTTTACACATGCCATG+GGG | + | chr4.3:30114444-30114463 | None:intergenic | 45.0% | |
TGATTCCTCGCCGTAACTAA+CGG | + | chr4.3:30110207-30110226 | None:intergenic | 45.0% | |
TGTATCCGGAATTTGAACCC+CGG | + | chr4.3:30113446-30113465 | None:intergenic | 45.0% | |
! | AGGAGGTATGGCTGGAAAAT+AGG | + | chr4.3:30112261-30112280 | None:intergenic | 45.0% |
! | CATCTTGCCGGATTTGGTAA+TGG | - | chr4.3:30110157-30110176 | MS.gene045567:CDS | 45.0% |
! | GTGAGTTTAGCTCAGTTGGT+AGG | + | chr4.3:30113474-30113493 | None:intergenic | 45.0% |
! | GTTGGTAGGGACAATGTATC+CGG | + | chr4.3:30113460-30113479 | None:intergenic | 45.0% |
! | TCGATATGTACCGGTACGTT+TGG | + | chr4.3:30113527-30113546 | None:intergenic | 45.0% |
! | TGTCGTGAGTTTAGCTCAGT+TGG | + | chr4.3:30113478-30113497 | None:intergenic | 45.0% |
!! | AACTTGCTGCTTCTGCTTCA+CGG | + | chr4.3:30112423-30112442 | None:intergenic | 45.0% |
!!! | CTATTTTTTTGTGGTGGCCG+GGG | - | chr4.3:30113426-30113445 | MS.gene045567:intron | 45.0% |
!! | ATAATAACTAAATATAATTT+GGG | + | chr4.3:30113353-30113372 | None:intergenic | 5.0% |
!! | TATAATAACTAAATATAATT+TGG | + | chr4.3:30113354-30113373 | None:intergenic | 5.0% |
ATTGGACACCAGACTTGCAC+AGG | - | chr4.3:30111694-30111713 | MS.gene045567:intron | 50.0% | |
CAGGAGATTTGTGCAAGCTG+TGG | - | chr4.3:30111713-30111732 | MS.gene045567:intron | 50.0% | |
CCAGCACTTGACAGCGTAAT+GGG | - | chr4.3:30115013-30115032 | MS.gene045567:CDS | 50.0% | |
CTTTACACATGCCATGGGGT+GGG | + | chr4.3:30114440-30114459 | None:intergenic | 50.0% | |
GATGAATTCTTCGGCGTCAC+TGG | - | chr4.3:30110229-30110248 | MS.gene045567:intron | 50.0% | |
GGAAACAATGTGTTCCTGGC+CGG | + | chr4.3:30114102-30114121 | None:intergenic | 50.0% | |
GGTGGGAAACAATGTGTTCC+TGG | + | chr4.3:30114106-30114125 | None:intergenic | 50.0% | |
GGTTGACGGAGGAAGAGTTA+AGG | + | chr4.3:30111334-30111353 | None:intergenic | 50.0% | |
GTGAAGCAGAAGCAGCAAGT+TGG | - | chr4.3:30112422-30112441 | MS.gene045567:CDS | 50.0% | |
GTTACCACTGTTGTCAGAGG+TGG | + | chr4.3:30114127-30114146 | None:intergenic | 50.0% | |
TCCAGCACTTGACAGCGTAA+TGG | - | chr4.3:30115012-30115031 | MS.gene045567:CDS | 50.0% | |
TGCAAGCTGTGGAACAGCTA+GGG | - | chr4.3:30111724-30111743 | MS.gene045567:intron | 50.0% | |
TGGAAGTCGAAGAAGTGACC+CGG | + | chr4.3:30114492-30114511 | None:intergenic | 50.0% | |
TGGAGACATCTTGCCGGATT+TGG | - | chr4.3:30110151-30110170 | MS.gene045567:CDS | 50.0% | |
TTCGTTGGCATCAACGTCGA+TGG | - | chr4.3:30110131-30110150 | MS.gene045567:CDS | 50.0% | |
! | ACTTGCTGCTTCTGCTTCAC+GGG | + | chr4.3:30112422-30112441 | None:intergenic | 50.0% |
! | GACTTTGGAGACCTTTCCGA+AGG | - | chr4.3:30110074-30110093 | MS.gene045567:CDS | 50.0% |
! | GAGAGCATAGACGCAGCTAT+TGG | - | chr4.3:30114941-30114960 | MS.gene045567:CDS | 50.0% |
! | GCTTTGAGTCCAAGTGGTAG+TGG | + | chr4.3:30114992-30115011 | None:intergenic | 50.0% |
!! | AATGGTGCCATATGAGGAGG+AGG | + | chr4.3:30112547-30112566 | None:intergenic | 50.0% |
!! | TGCAATGGTGCCATATGAGG+AGG | + | chr4.3:30112550-30112569 | None:intergenic | 50.0% |
!! | TGGTGCAATGGTGCCATATG+AGG | + | chr4.3:30112553-30112572 | None:intergenic | 50.0% |
AAGCTGTTCGGGTCAAGGCT+CGG | - | chr4.3:30110307-30110326 | MS.gene045567:intron | 55.0% | |
ACAAACGCAATGATCCGGCC+AGG | - | chr4.3:30114085-30114104 | MS.gene045567:intron | 55.0% | |
ACAGCTAGGGGTGGATAAGG+CGG | - | chr4.3:30111737-30111756 | MS.gene045567:intron | 55.0% | |
ACCACTGTTGTCAGAGGTGG+TGG | + | chr4.3:30114124-30114143 | None:intergenic | 55.0% | |
ACCGATGGTGTCCATGAGAG+TGG | + | chr4.3:30112652-30112671 | None:intergenic | 55.0% | |
CCACTGTTGTCAGAGGTGGT+GGG | + | chr4.3:30114123-30114142 | None:intergenic | 55.0% | |
CCATGGTTGCCACTACCACT+TGG | - | chr4.3:30114980-30114999 | MS.gene045567:CDS | 55.0% | |
CCCATTACGCTGTCAAGTGC+TGG | + | chr4.3:30115016-30115035 | None:intergenic | 55.0% | |
CGTCGATGGAGACATCTTGC+CGG | - | chr4.3:30110145-30110164 | MS.gene045567:CDS | 55.0% | |
GCAAGCTGTGGAACAGCTAG+GGG | - | chr4.3:30111725-30111744 | MS.gene045567:intron | 55.0% | |
GCCACTCTCATGGACACCAT+CGG | - | chr4.3:30112648-30112667 | MS.gene045567:CDS | 55.0% | |
GCTTTACACATGCCATGGGG+TGG | + | chr4.3:30114441-30114460 | None:intergenic | 55.0% | |
GGAACAGCTAGGGGTGGATA+AGG | - | chr4.3:30111734-30111753 | MS.gene045567:intron | 55.0% | |
GGCCGGATCATTGCGTTTGT+TGG | + | chr4.3:30114085-30114104 | None:intergenic | 55.0% | |
GGTTAGAGAGAGCTACCTGC+TGG | + | chr4.3:30112720-30112739 | None:intergenic | 55.0% | |
GTGCAAGCTGTGGAACAGCT+AGG | - | chr4.3:30111723-30111742 | MS.gene045567:intron | 55.0% | |
GTTCTCCGTTAGTTACGGCG+AGG | - | chr4.3:30110199-30110218 | MS.gene045567:intron | 55.0% | |
TAGAGAGAGCTACCTGCTGG+TGG | + | chr4.3:30112717-30112736 | None:intergenic | 55.0% | |
TCCTCCTCCTCCTCCTCATA+TGG | - | chr4.3:30112537-30112556 | MS.gene045567:CDS | 55.0% | |
TCTTCCTCCGTCAACCACTC+TGG | - | chr4.3:30111338-30111357 | MS.gene045567:intron | 55.0% | |
TGGATAAGGCGGTGCCTTCA+AGG | - | chr4.3:30111748-30111767 | MS.gene045567:intron | 55.0% | |
TTGGCATTCTCACCACCAGC+AGG | - | chr4.3:30112702-30112721 | MS.gene045567:CDS | 55.0% | |
! | GAAGGATCTTGAGGTGGTGG+AGG | + | chr4.3:30112679-30112698 | None:intergenic | 55.0% |
! | GGCGGTGCCTTCAAGGATTT+TGG | - | chr4.3:30111755-30111774 | MS.gene045567:intron | 55.0% |
!! | CCAAGTGGTAGTGGCAACCA+TGG | + | chr4.3:30114983-30115002 | None:intergenic | 55.0% |
!! | GCTGGAGCTTTGAGTCCAAG+TGG | + | chr4.3:30114998-30115017 | None:intergenic | 55.0% |
AAGAAGTGACCCGGAGCAGG+AGG | + | chr4.3:30114483-30114502 | None:intergenic | 60.0% | |
AGAAGTGACCCGGAGCAGGA+GGG | + | chr4.3:30114482-30114501 | None:intergenic | 60.0% | |
AGCTGTGGAACAGCTAGGGG+TGG | - | chr4.3:30111728-30111747 | MS.gene045567:intron | 60.0% | |
AGGACCAGAGTGGTTGACGG+AGG | + | chr4.3:30111345-30111364 | None:intergenic | 60.0% | |
AGGAGGAGGAGGAGGATGAG+GGG | + | chr4.3:30112533-30112552 | None:intergenic | 60.0% | |
AGGATGAGGGGGGAAACCCA+TGG | + | chr4.3:30112521-30112540 | None:intergenic | 60.0% | |
ATGAGGGGGGAAACCCATGG+TGG | + | chr4.3:30112518-30112537 | None:intergenic | 60.0% | |
ATTAGCACCCCTCCTGCTCC+GGG | - | chr4.3:30114471-30114490 | MS.gene045567:intron | 60.0% | |
CATGAGAGTGGCTGCGGTGT+AGG | + | chr4.3:30112640-30112659 | None:intergenic | 60.0% | |
CATTAGCACCCCTCCTGCTC+CGG | - | chr4.3:30114470-30114489 | MS.gene045567:intron | 60.0% | |
CCCACCACCTCTGACAACAG+TGG | - | chr4.3:30114120-30114139 | MS.gene045567:intron | 60.0% | |
CTACACCGCAGCCACTCTCA+TGG | - | chr4.3:30112638-30112657 | MS.gene045567:CDS | 60.0% | |
GAGGAGGAGGAGGAGGATGA+GGG | + | chr4.3:30112534-30112553 | None:intergenic | 60.0% | |
GCCATATGAGGAGGAGGAGG+AGG | + | chr4.3:30112541-30112560 | None:intergenic | 60.0% | |
GGTGGCCGGGGTTCAAATTC+CGG | - | chr4.3:30113438-30113457 | MS.gene045567:intron | 60.0% | |
GGTGTCCATGAGAGTGGCTG+CGG | + | chr4.3:30112646-30112665 | None:intergenic | 60.0% | |
GTGGGGAGTCATCGCATCAC+AGG | - | chr4.3:30114597-30114616 | MS.gene045567:intron | 60.0% | |
TCGAAGAAGTGACCCGGAGC+AGG | + | chr4.3:30114486-30114505 | None:intergenic | 60.0% | |
TGAGGAGGAGGAGGAGGATG+AGG | + | chr4.3:30112535-30112554 | None:intergenic | 60.0% | |
TGAGGGGGGAAACCCATGGT+GGG | + | chr4.3:30112517-30112536 | None:intergenic | 60.0% | |
! | GGTGCCATATGAGGAGGAGG+AGG | + | chr4.3:30112544-30112563 | None:intergenic | 60.0% |
!! | AAACCCATGGTGGGTGCAGC+TGG | + | chr4.3:30112508-30112527 | None:intergenic | 60.0% |
ATGCCATGGGGTGGGATGCC+GGG | + | chr4.3:30114432-30114451 | None:intergenic | 65.0% | |
ATGGCCAGCTGCACCCACCA+TGG | - | chr4.3:30112501-30112520 | MS.gene045567:CDS | 65.0% | |
CATGCCATGGGGTGGGATGC+CGG | + | chr4.3:30114433-30114452 | None:intergenic | 65.0% | |
GAAGTGACCCGGAGCAGGAG+GGG | + | chr4.3:30114481-30114500 | None:intergenic | 65.0% | |
GAGGAGGAGGAGGATGAGGG+GGG | + | chr4.3:30112531-30112550 | None:intergenic | 65.0% | |
GGAGGAGGAGGAGGATGAGG+GGG | + | chr4.3:30112532-30112551 | None:intergenic | 65.0% | |
TGGCCAGCTGCACCCACCAT+GGG | - | chr4.3:30112502-30112521 | MS.gene045567:CDS | 65.0% | |
!! | ATGGTGGGTGCAGCTGGCCA+TGG | + | chr4.3:30112502-30112521 | None:intergenic | 65.0% |
!! | GGTGGTGGAGGAGCTACCGA+TGG | + | chr4.3:30112667-30112686 | None:intergenic | 65.0% |
ATCCCCGGCATCCCACCCCA+TGG | - | chr4.3:30114426-30114445 | MS.gene045567:intron | 70.0% | |
TGCCATGGGGTGGGATGCCG+GGG | + | chr4.3:30114431-30114450 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.3 | gene | 30110032 | 30115087 | 30110032 | ID=MS.gene045567 |
chr4.3 | mRNA | 30110032 | 30115087 | 30110032 | ID=MS.gene045567.t1;Parent=MS.gene045567 |
chr4.3 | exon | 30114668 | 30115087 | 30114668 | ID=MS.gene045567.t1.exon1;Parent=MS.gene045567.t1 |
chr4.3 | CDS | 30114668 | 30115087 | 30114668 | ID=cds.MS.gene045567.t1;Parent=MS.gene045567.t1 |
chr4.3 | exon | 30113289 | 30113429 | 30113289 | ID=MS.gene045567.t1.exon2;Parent=MS.gene045567.t1 |
chr4.3 | CDS | 30113289 | 30113429 | 30113289 | ID=cds.MS.gene045567.t1;Parent=MS.gene045567.t1 |
chr4.3 | exon | 30112396 | 30112731 | 30112396 | ID=MS.gene045567.t1.exon3;Parent=MS.gene045567.t1 |
chr4.3 | CDS | 30112396 | 30112731 | 30112396 | ID=cds.MS.gene045567.t1;Parent=MS.gene045567.t1 |
chr4.3 | exon | 30110978 | 30111040 | 30110978 | ID=MS.gene045567.t1.exon4;Parent=MS.gene045567.t1 |
chr4.3 | CDS | 30110978 | 30111040 | 30110978 | ID=cds.MS.gene045567.t1;Parent=MS.gene045567.t1 |
chr4.3 | exon | 30110604 | 30110714 | 30110604 | ID=MS.gene045567.t1.exon5;Parent=MS.gene045567.t1 |
chr4.3 | CDS | 30110604 | 30110714 | 30110604 | ID=cds.MS.gene045567.t1;Parent=MS.gene045567.t1 |
chr4.3 | exon | 30110032 | 30110184 | 30110032 | ID=MS.gene045567.t1.exon6;Parent=MS.gene045567.t1 |
chr4.3 | CDS | 30110032 | 30110184 | 30110032 | ID=cds.MS.gene045567.t1;Parent=MS.gene045567.t1 |
Gene Sequence |
Protein sequence |