AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene045579

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene045579.t1 MTR_4g078660 90.852 317 5 2 1 293 1 317 0.0 581
MS.gene045579.t1 MTR_2g090605 48.185 303 89 10 1 242 1 296 4.80e-78 243
MS.gene045579.t1 MTR_8g102100 51.813 193 84 4 54 241 75 263 1.30e-62 202
MS.gene045579.t1 MTR_6g090380 70.248 121 34 1 43 163 88 206 3.46e-62 201
MS.gene045579.t1 MTR_3g103960 55.280 161 51 3 56 215 49 189 8.01e-57 184
MS.gene045579.t1 MTR_7g092070 63.333 120 44 0 56 175 260 379 7.85e-54 186
MS.gene045579.t1 MTR_3g029590 49.708 171 76 4 56 221 260 425 1.10e-51 181
MS.gene045579.t1 MTR_3g435680 36.154 260 132 4 56 292 147 395 1.19e-48 166
MS.gene045579.t1 MTR_5g082830 50.000 166 77 1 56 221 213 372 3.54e-48 170
MS.gene045579.t1 MTR_1g050438 57.500 120 49 1 56 175 224 341 3.12e-47 167
MS.gene045579.t1 MTR_5g071070 55.000 120 54 0 56 175 144 263 3.45e-47 167
MS.gene045579.t1 MTR_0728s0020 57.500 120 49 1 56 175 240 357 5.48e-47 166
MS.gene045579.t1 MTR_5g071070 55.000 120 54 0 56 175 226 345 8.54e-47 167
MS.gene045579.t1 MTR_1g075890 54.167 120 55 0 56 175 225 344 3.46e-45 162
MS.gene045579.t1 MTR_3g070880 42.197 173 94 2 8 174 105 277 1.33e-43 155
MS.gene045579.t1 MTR_3g435590 39.336 211 113 5 22 231 206 402 2.65e-43 154
MS.gene045579.t1 MTR_3g464270 40.719 167 87 3 53 216 2 159 8.96e-36 132
MS.gene045579.t1 MTR_3g464260 49.474 95 48 0 91 185 212 306 1.30e-28 115
MS.gene045579.t1 MTR_3g464290 51.163 86 41 1 56 140 96 181 1.50e-26 108
MS.gene045579.t1 MTR_3g464280 38.532 109 33 1 56 164 184 258 9.34e-20 89.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene045579.t1 AT1G03790 57.082 233 57 8 53 253 75 296 2.14e-78 243
MS.gene045579.t1 AT5G44260 57.789 199 48 5 29 199 17 207 1.25e-68 218
MS.gene045579.t1 AT4G29190 62.963 135 47 1 33 164 49 183 1.06e-61 199
MS.gene045579.t1 AT2G25900 74.775 111 28 0 54 164 84 194 2.21e-61 197
MS.gene045579.t1 AT2G25900 74.775 111 28 0 54 164 84 194 2.21e-61 197
MS.gene045579.t1 AT2G19810 72.973 111 30 0 54 164 72 182 2.42e-61 198
MS.gene045579.t1 AT2G41900 60.833 120 47 0 56 175 257 376 3.38e-52 182
MS.gene045579.t1 AT5G07500 64.865 111 39 0 52 162 44 154 2.47e-50 167
MS.gene045579.t1 AT5G58620 59.167 120 49 0 56 175 205 324 3.42e-50 175
MS.gene045579.t1 AT5G12850 47.024 168 83 2 56 222 253 415 2.20e-49 174
MS.gene045579.t1 AT2G40140 42.077 183 97 2 34 216 190 363 2.35e-45 162
MS.gene045579.t1 AT2G40140 42.077 183 97 2 34 216 190 363 2.35e-45 162
MS.gene045579.t1 AT3G55980 40.314 191 86 4 36 220 189 357 4.38e-45 160
MS.gene045579.t1 AT3G55980 40.314 191 86 4 36 220 256 424 1.27e-44 160

Find 71 sgRNAs with CRISPR-Local

Find 101 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCACTTGAATTATAATATT+TGG 0.138763 4.1:+27300890 None:intergenic
AATGATGTCACACCAGATTT+TGG 0.197364 4.1:-27300819 MS.gene045579:CDS
GAGAGATGAACAAAGGATTA+AGG 0.262097 4.1:-27300850 MS.gene045579:CDS
TAATGAGCTTATTCGTTCTA+TGG 0.266931 4.1:-27300970 MS.gene045579:CDS
CACATCTTTAAAATTTGAAT+TGG 0.299963 4.1:+27301001 None:intergenic
GTCAGTGACGGCGGTGGAGG+TGG 0.303772 4.1:+27301532 None:intergenic
CGGAAATGGTCCGAGGAATA+AGG 0.321371 4.1:+27301491 None:intergenic
TCCAGTCGTGGCTCCGGCTA+CGG 0.353618 4.1:+27301438 None:intergenic
CGGTGGAGGTGGGTGAGCGG+CGG 0.371274 4.1:+27301543 None:intergenic
CAGTTTCCACGGCGGTAATC+AGG 0.380359 4.1:+27301335 None:intergenic
GGGTGTAGGAGAAGGAGAAA+GGG 0.382653 4.1:+27301151 None:intergenic
GGTGTAGGAGAAGGAGAAAG+GGG 0.386886 4.1:+27301152 None:intergenic
GGGGTGTAGGAGAAGGAGAA+AGG 0.391140 4.1:+27301150 None:intergenic
TGAACTCGTACATTCGGAAA+TGG 0.412475 4.1:+27301477 None:intergenic
CCAGTCGTGGCTCCGGCTAC+GGG 0.415412 4.1:+27301439 None:intergenic
TAATATTTGGAAGCAGAAAC+AGG 0.417260 4.1:+27300903 None:intergenic
TCATTCACCCACCCAAAATC+TGG 0.421911 4.1:+27300807 None:intergenic
AGTGCTGGTTGCACCCTTCA+AGG 0.423216 4.1:-27301271 MS.gene045579:CDS
CCCACTTCTACTTTGTTAAG+TGG 0.437563 4.1:-27301068 MS.gene045579:CDS
CGCCGTGGAAACTGCGACCG+CGG 0.439207 4.1:-27301326 MS.gene045579:CDS
GCTTCAGTTCTATACCTTGA+AGG 0.441697 4.1:+27301257 None:intergenic
GGTGGAGGTGGGTGAGCGGC+GGG 0.446091 4.1:+27301544 None:intergenic
GACTGCCCTTTCGCCCATCC+AGG 0.447522 4.1:-27301413 MS.gene045579:CDS
TCCGGCTACGGGTGCATCGC+CGG 0.451200 4.1:+27301450 None:intergenic
CCCGTAGCCGGAGCCACGAC+TGG 0.463023 4.1:-27301439 MS.gene045579:CDS
CGATGAGGATCCTTATTCCT+CGG 0.469526 4.1:-27301501 MS.gene045579:CDS
CGGCGGGTGAGTAGCTTCCT+AGG 0.471531 4.1:+27301560 None:intergenic
CATGTCAGTGACGGCGGTGG+AGG 0.473061 4.1:+27301529 None:intergenic
TTTCGCCCATCCAGGCGAAA+AGG 0.492467 4.1:-27301405 MS.gene045579:CDS
CCACTTCTACTTTGTTAAGT+GGG 0.493579 4.1:-27301067 MS.gene045579:CDS
AGTCAGTCCAGTCGTGGCTC+CGG 0.493879 4.1:+27301432 None:intergenic
AGAACTGAAGCTTGTAAAGA+TGG 0.494694 4.1:-27301245 MS.gene045579:CDS
CACCGCGGTCGCAGTTTCCA+CGG 0.495031 4.1:+27301324 None:intergenic
CACTCTAAGGGACACTATCA+TGG 0.497717 4.1:-27301594 MS.gene045579:CDS
TATAATTCAAGTGGTGGTAG+TGG 0.499612 4.1:-27300882 MS.gene045579:CDS
TCAGTGACGGCGGTGGAGGT+GGG 0.503377 4.1:+27301533 None:intergenic
TCCGGCGATGCACCCGTAGC+CGG 0.506464 4.1:-27301451 MS.gene045579:CDS
TCCAAATATTATAATTCAAG+TGG 0.525309 4.1:-27300891 MS.gene045579:CDS
CTTCAGTTCTATACCTTGAA+GGG 0.525702 4.1:+27301258 None:intergenic
TTTCGCCTGGATGGGCGAAA+GGG 0.529164 4.1:+27301408 None:intergenic
TTAAAATTTGAATTGGACAA+AGG 0.542814 4.1:+27301008 None:intergenic
CGGCGGTGGAGGTGGGTGAG+CGG 0.570782 4.1:+27301540 None:intergenic
GAATGTACGAGTTCAAAATC+CGG 0.577680 4.1:-27301469 MS.gene045579:CDS
CCCACTTAACAAAGTAGAAG+TGG 0.579402 4.1:+27301067 None:intergenic
AAACATGTCAGTGACGGCGG+TGG 0.580438 4.1:+27301526 None:intergenic
AAATATTATAATTCAAGTGG+TGG 0.586798 4.1:-27300888 MS.gene045579:CDS
GGGTGAGTAGCTTCCTAGGT+GGG 0.590238 4.1:+27301564 None:intergenic
CGGGTGAGTAGCTTCCTAGG+TGG 0.603813 4.1:+27301563 None:intergenic
ACCGGAGTACTGATACCTGA+GGG 0.606467 4.1:+27301367 None:intergenic
CCCCTCAGGTATCAGTACTC+CGG 0.607988 4.1:-27301368 MS.gene045579:CDS
AAGGGCAGTCAGTCCAGTCG+TGG 0.612908 4.1:+27301426 None:intergenic
TGGTGATGATATTGTTCATG+AGG 0.613976 4.1:-27300934 MS.gene045579:CDS
GAATTGGACAAAGGTGACAA+AGG 0.615578 4.1:+27301017 None:intergenic
ATCGGAAAACATGTCAGTGA+CGG 0.625042 4.1:+27301520 None:intergenic
GTAATCAGGACACACCTCAC+CGG 0.640259 4.1:+27301349 None:intergenic
GTAGGAGAAGGAGAAAGGGG+TGG 0.646237 4.1:+27301155 None:intergenic
CGAGGAATAAGGATCCTCAT+CGG 0.647314 4.1:+27301502 None:intergenic
GAAGCGTGTGAATTCTCCCA+CGG 0.655675 4.1:-27301302 MS.gene045579:CDS
CCACTTAACAAAGTAGAAGT+GGG 0.659131 4.1:+27301068 None:intergenic
AGCAAAACTCTAAGTTGACG+AGG 0.664102 4.1:+27301182 None:intergenic
GTGTGTCCTGATTACCGCCG+TGG 0.679034 4.1:-27301341 MS.gene045579:CDS
TCATGGACAACATCCCACCT+AGG 0.683628 4.1:-27301577 MS.gene045579:CDS
GGAAAACATGTCAGTGACGG+CGG 0.684057 4.1:+27301523 None:intergenic
CACCGGAGTACTGATACCTG+AGG 0.684435 4.1:+27301366 None:intergenic
GTACATTCGGAAATGGTCCG+AGG 0.686670 4.1:+27301484 None:intergenic
CAGGTATCAGTACTCCGGTG+AGG 0.694360 4.1:-27301363 MS.gene045579:CDS
CGGAGTACTGATACCTGAGG+GGG 0.701089 4.1:+27301369 None:intergenic
CCGGAGTACTGATACCTGAG+GGG 0.737115 4.1:+27301368 None:intergenic
CGCGGTCGCAGTTTCCACGG+CGG 0.739171 4.1:+27301327 None:intergenic
TTGGACAAAGGTGACAAAGG+TGG 0.748749 4.1:+27301020 None:intergenic
AGAATTCACACGCTTCACCG+CGG 0.764375 4.1:+27301309 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTGTTGTTTTTTTGA+GGG + chr4.1:27301321-27301340 None:intergenic 15.0%
!! AAATATTATAATTCAAGTGG+TGG - chr4.1:27301559-27301578 MS.gene045579:CDS 20.0%
!! ACCACTTGAATTATAATATT+TGG + chr4.1:27301560-27301579 None:intergenic 20.0%
!! TCCAAATATTATAATTCAAG+TGG - chr4.1:27301556-27301575 MS.gene045579:CDS 20.0%
!! TGAATTTGAAGAAGAAAAAT+GGG + chr4.1:27301407-27301426 None:intergenic 20.0%
!! TTAAAATTTGAATTGGACAA+AGG + chr4.1:27301442-27301461 None:intergenic 20.0%
!!! CACATCTTTAAAATTTGAAT+TGG + chr4.1:27301449-27301468 None:intergenic 20.0%
!!! CATTTTTTGTTGTTTTTTTG+AGG + chr4.1:27301322-27301341 None:intergenic 20.0%
!!! TTTTTTGTTGTTTTTTTGAG+GGG + chr4.1:27301320-27301339 None:intergenic 20.0%
! GAATTTGAAGAAGAAAAATG+GGG + chr4.1:27301406-27301425 None:intergenic 25.0%
! GTGAATTTGAAGAAGAAAAA+TGG + chr4.1:27301408-27301427 None:intergenic 25.0%
!!! TTTTTGTTGTTTTTTTGAGG+GGG + chr4.1:27301319-27301338 None:intergenic 25.0%
TAATATTTGGAAGCAGAAAC+AGG + chr4.1:27301547-27301566 None:intergenic 30.0%
TAATGAGCTTATTCGTTCTA+TGG - chr4.1:27301477-27301496 MS.gene045579:CDS 30.0%
!! TGTTTTTGAGAGATGAACAA+AGG - chr4.1:27301590-27301609 MS.gene045579:CDS 30.0%
!!! TCTATGGAGAGTTTTAACTT+TGG - chr4.1:27301493-27301512 MS.gene045579:CDS 30.0%
AGAACTGAAGCTTGTAAAGA+TGG - chr4.1:27301202-27301221 MS.gene045579:CDS 35.0%
CCACTTAACAAAGTAGAAGT+GGG + chr4.1:27301382-27301401 None:intergenic 35.0%
CCACTTCTACTTTGTTAAGT+GGG - chr4.1:27301380-27301399 MS.gene045579:CDS 35.0%
CTTCAGTTCTATACCTTGAA+GGG + chr4.1:27301192-27301211 None:intergenic 35.0%
GAAAAAGTCTCTCACTCTAA+GGG - chr4.1:27300841-27300860 MS.gene045579:CDS 35.0%
GAATGTACGAGTTCAAAATC+CGG - chr4.1:27300978-27300997 MS.gene045579:CDS 35.0%
GAGAGATGAACAAAGGATTA+AGG - chr4.1:27301597-27301616 MS.gene045579:CDS 35.0%
TATAATTCAAGTGGTGGTAG+TGG - chr4.1:27301565-27301584 MS.gene045579:CDS 35.0%
TGAAAAAGTCTCTCACTCTA+AGG - chr4.1:27300840-27300859 MS.gene045579:CDS 35.0%
! AATGATGTCACACCAGATTT+TGG - chr4.1:27301628-27301647 MS.gene045579:CDS 35.0%
! ATGATGTCACACCAGATTTT+GGG - chr4.1:27301629-27301648 MS.gene045579:CDS 35.0%
! GGATTTTGAACTCGTACATT+CGG + chr4.1:27300979-27300998 None:intergenic 35.0%
! TGGTGATGATATTGTTCATG+AGG - chr4.1:27301513-27301532 MS.gene045579:CDS 35.0%
!! TTAGAGTGAGAGACTTTTTC+AGG + chr4.1:27300841-27300860 None:intergenic 35.0%
!!! TAGAGTGAGAGACTTTTTCA+GGG + chr4.1:27300840-27300859 None:intergenic 35.0%
ATCGGAAAACATGTCAGTGA+CGG + chr4.1:27300930-27300949 None:intergenic 40.0%
CCCACTTAACAAAGTAGAAG+TGG + chr4.1:27301383-27301402 None:intergenic 40.0%
CCCACTTCTACTTTGTTAAG+TGG - chr4.1:27301379-27301398 MS.gene045579:CDS 40.0%
GAATTGGACAAAGGTGACAA+AGG + chr4.1:27301433-27301452 None:intergenic 40.0%
GCTTCAGTTCTATACCTTGA+AGG + chr4.1:27301193-27301212 None:intergenic 40.0%
TGAACTCGTACATTCGGAAA+TGG + chr4.1:27300973-27300992 None:intergenic 40.0%
! AGCAAAACTCTAAGTTGACG+AGG + chr4.1:27301268-27301287 None:intergenic 40.0%
!!! TGAGAGACTTTTTCAGGGAA+AGG + chr4.1:27300835-27300854 None:intergenic 40.0%
!!! TTGTTTTTTTGAGGGGGTGT+AGG + chr4.1:27301313-27301332 None:intergenic 40.0%
CGAGGAATAAGGATCCTCAT+CGG + chr4.1:27300948-27300967 None:intergenic 45.0%
CGATGAGGATCCTTATTCCT+CGG - chr4.1:27300946-27300965 MS.gene045579:CDS 45.0%
TCATTCACCCACCCAAAATC+TGG + chr4.1:27301643-27301662 None:intergenic 45.0%
TTGGACAAAGGTGACAAAGG+TGG + chr4.1:27301430-27301449 None:intergenic 45.0%
! ATGTCACACCAGATTTTGGG+TGG - chr4.1:27301632-27301651 MS.gene045579:CDS 45.0%
! CACTCTAAGGGACACTATCA+TGG - chr4.1:27300853-27300872 MS.gene045579:CDS 45.0%
! CACTGACATGTTTTCCGATG+AGG - chr4.1:27300931-27300950 MS.gene045579:CDS 45.0%
!! TGTCACACCAGATTTTGGGT+GGG - chr4.1:27301633-27301652 MS.gene045579:CDS 45.0%
ACCAGCACTCAAAAACTCCG+TGG + chr4.1:27301165-27301184 None:intergenic 50.0%
AGAATTCACACGCTTCACCG+CGG + chr4.1:27301141-27301160 None:intergenic 50.0%
CCAGCACTCAAAAACTCCGT+GGG + chr4.1:27301164-27301183 None:intergenic 50.0%
CGGAAATGGTCCGAGGAATA+AGG + chr4.1:27300959-27300978 None:intergenic 50.0%
GAAGCGTGTGAATTCTCCCA+CGG - chr4.1:27301145-27301164 MS.gene045579:CDS 50.0%
GGAAAACATGTCAGTGACGG+CGG + chr4.1:27300927-27300946 None:intergenic 50.0%
GGGTGTAGGAGAAGGAGAAA+GGG + chr4.1:27301299-27301318 None:intergenic 50.0%
GGTGTAGGAGAAGGAGAAAG+GGG + chr4.1:27301298-27301317 None:intergenic 50.0%
GTAATCAGGACACACCTCAC+CGG + chr4.1:27301101-27301120 None:intergenic 50.0%
GTACATTCGGAAATGGTCCG+AGG + chr4.1:27300966-27300985 None:intergenic 50.0%
TCATGGACAACATCCCACCT+AGG - chr4.1:27300870-27300889 MS.gene045579:CDS 50.0%
!! ACCGGAGTACTGATACCTGA+GGG + chr4.1:27301083-27301102 None:intergenic 50.0%
!! TTTTGAGGGGGTGTAGGAGA+AGG + chr4.1:27301307-27301326 None:intergenic 50.0%
AAACATGTCAGTGACGGCGG+TGG + chr4.1:27300924-27300943 None:intergenic 55.0%
CAGGTATCAGTACTCCGGTG+AGG - chr4.1:27301084-27301103 MS.gene045579:CDS 55.0%
CAGTTTCCACGGCGGTAATC+AGG + chr4.1:27301115-27301134 None:intergenic 55.0%
CCCCTCAGGTATCAGTACTC+CGG - chr4.1:27301079-27301098 MS.gene045579:CDS 55.0%
GGGGTGTAGGAGAAGGAGAA+AGG + chr4.1:27301300-27301319 None:intergenic 55.0%
GGGTGAGTAGCTTCCTAGGT+GGG + chr4.1:27300886-27300905 None:intergenic 55.0%
GTAGGAGAAGGAGAAAGGGG+TGG + chr4.1:27301295-27301314 None:intergenic 55.0%
TTTCGCCCATCCAGGCGAAA+AGG - chr4.1:27301042-27301061 MS.gene045579:CDS 55.0%
TTTCGCCTGGATGGGCGAAA+GGG + chr4.1:27301042-27301061 None:intergenic 55.0%
! TTTTCGCCTGGATGGGCGAA+AGG + chr4.1:27301043-27301062 None:intergenic 55.0%
!! AGTGCTGGTTGCACCCTTCA+AGG - chr4.1:27301176-27301195 MS.gene045579:CDS 55.0%
!! CACCGGAGTACTGATACCTG+AGG + chr4.1:27301084-27301103 None:intergenic 55.0%
!! CCGGAGTACTGATACCTGAG+GGG + chr4.1:27301082-27301101 None:intergenic 55.0%
!! CGGAGTACTGATACCTGAGG+GGG + chr4.1:27301081-27301100 None:intergenic 55.0%
!!! CCCACGGAGTTTTTGAGTGC+TGG - chr4.1:27301161-27301180 MS.gene045579:CDS 55.0%
AAGGGCAGTCAGTCCAGTCG+TGG + chr4.1:27301024-27301043 None:intergenic 60.0%
AGTCAGTCCAGTCGTGGCTC+CGG + chr4.1:27301018-27301037 None:intergenic 60.0%
CGGGTGAGTAGCTTCCTAGG+TGG + chr4.1:27300887-27300906 None:intergenic 60.0%
GATACCTGAGGGGGTCACGA+CGG + chr4.1:27301072-27301091 None:intergenic 60.0%
GTGTGTCCTGATTACCGCCG+TGG - chr4.1:27301106-27301125 MS.gene045579:CDS 60.0%
! GCGAGCCTTTTCGCCTGGAT+GGG + chr4.1:27301050-27301069 None:intergenic 60.0%
CACCGCGGTCGCAGTTTCCA+CGG + chr4.1:27301126-27301145 None:intergenic 65.0%
CATGTCAGTGACGGCGGTGG+AGG + chr4.1:27300921-27300940 None:intergenic 65.0%
CGGCGGGTGAGTAGCTTCCT+AGG + chr4.1:27300890-27300909 None:intergenic 65.0%
GACTGCCCTTTCGCCCATCC+AGG - chr4.1:27301034-27301053 MS.gene045579:CDS 65.0%
TCAGTGACGGCGGTGGAGGT+GGG + chr4.1:27300917-27300936 None:intergenic 65.0%
TCCAGTCGTGGCTCCGGCTA+CGG + chr4.1:27301012-27301031 None:intergenic 65.0%
! GGCGAGCCTTTTCGCCTGGA+TGG + chr4.1:27301051-27301070 None:intergenic 65.0%
CCAGTCGTGGCTCCGGCTAC+GGG + chr4.1:27301011-27301030 None:intergenic 70.0%
CGCCGTGGAAACTGCGACCG+CGG - chr4.1:27301121-27301140 MS.gene045579:CDS 70.0%
CGCGGTCGCAGTTTCCACGG+CGG + chr4.1:27301123-27301142 None:intergenic 70.0%
GTCAGTGACGGCGGTGGAGG+TGG + chr4.1:27300918-27300937 None:intergenic 70.0%
TCCGGCGATGCACCCGTAGC+CGG - chr4.1:27300996-27301015 MS.gene045579:CDS 70.0%
TCCGGCTACGGGTGCATCGC+CGG + chr4.1:27301000-27301019 None:intergenic 70.0%
! CGACGGCGAGCCTTTTCGCC+TGG + chr4.1:27301055-27301074 None:intergenic 70.0%
CCCGTAGCCGGAGCCACGAC+TGG - chr4.1:27301008-27301027 MS.gene045579:CDS 75.0%
CGGCGGTGGAGGTGGGTGAG+CGG + chr4.1:27300910-27300929 None:intergenic 75.0%
CGGTGGAGGTGGGTGAGCGG+CGG + chr4.1:27300907-27300926 None:intergenic 75.0%
CTCGCCGTCGTGACCCCCTC+AGG - chr4.1:27301065-27301084 MS.gene045579:CDS 75.0%
GGTGGAGGTGGGTGAGCGGC+GGG + chr4.1:27300906-27300925 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 27300794 27301675 27300794 ID=MS.gene045579
chr4.1 mRNA 27300794 27301675 27300794 ID=MS.gene045579.t1;Parent=MS.gene045579
chr4.1 exon 27300794 27301675 27300794 ID=MS.gene045579.t1.exon1;Parent=MS.gene045579.t1
chr4.1 CDS 27300794 27301675 27300794 ID=cds.MS.gene045579.t1;Parent=MS.gene045579.t1
Gene Sequence

>MS.gene045579

ATGAGTAGTGTACTTTGTGAAGAGCAACAAAAACTTCTCCTTTCCCTGAAAAAGTCTCTCACTCTAAGGGACACTATCATGGACAACATCCCACCTAGGAAGCTACTCACCCGCCGCTCACCCACCTCCACCGCCGTCACTGACATGTTTTCCGATGAGGATCCTTATTCCTCGGACCATTTCCGAATGTACGAGTTCAAAATCCGGCGATGCACCCGTAGCCGGAGCCACGACTGGACTGACTGCCCTTTCGCCCATCCAGGCGAAAAGGCTCGCCGTCGTGACCCCCTCAGGTATCAGTACTCCGGTGAGGTGTGTCCTGATTACCGCCGTGGAAACTGCGACCGCGGTGAAGCGTGTGAATTCTCCCACGGAGTTTTTGAGTGCTGGTTGCACCCTTCAAGGTATAGAACTGAAGCTTGTAAAGATGGTAAAAATTGTAAGCGCAAAATTTGTTTTTTTGCTCATACACCTCGTCAACTTAGAGTTTTGCTTTTACCACCCCTTTCTCCTTCTCCTACACCCCCTCAAAAAAACAACAAAAAATGTTGTTCTTTCTGTCATTGCTGTTCAAATTCTTCTTCACCCACTTCTACTTTGTTAAGTGGGCCCCATTTTTCTTCTTCAAATTCACCACCTTTGTCACCTTTGTCCAATTCAAATTTTAAAGATGTGCATGTGCTTAATGAGCTTATTCGTTCTATGGAGAGTTTTAACTTTGGTGATGATATTGTTCATGAGGCTAATTCACCTGTTTCTGCTTCCAAATATTATAATTCAAGTGGTGGTAGTGGCATGTTTTTGAGAGATGAACAAAGGATTAAGGTTGTTGATAATGATGTCACACCAGATTTTGGGTGGGTGAATGAGCTGCTGATGTAG
Protein sequence

>MS.gene045579.t1

MSSVLCEEQQKLLLSLKKSLTLRDTIMDNIPPRKLLTRRSPTSTAVTDMFSDEDPYSSDHFRMYEFKIRRCTRSRSHDWTDCPFAHPGEKARRRDPLRYQYSGEVCPDYRRGNCDRGEACEFSHGVFECWLHPSRYRTEACKDGKNCKRKICFFAHTPRQLRVLLLPPLSPSPTPPQKNNKKCCSFCHCCSNSSSPTSTLLSGPHFSSSNSPPLSPLSNSNFKDVHVLNELIRSMESFNFGDDIVHEANSPVSASKYYNSSGGSGMFLRDEQRIKVVDNDVTPDFGWVNELLM