AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene045658

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene045658.t1 MTR_4g036050 96.835 158 5 0 1 158 1 158 1.30e-110 312
MS.gene045658.t1 MTR_4g036050 96.226 159 6 0 1 159 1 159 1.98e-110 312
MS.gene045658.t1 MTR_4g036050 89.809 157 16 0 1 157 1 157 8.42e-100 285
MS.gene045658.t1 MTR_4g036050 95.862 145 6 0 1 145 1 145 8.43e-100 285
MS.gene045658.t1 MTR_7g075870 47.500 160 83 1 1 160 1 159 8.69e-44 144
MS.gene045658.t1 MTR_7g075870 47.500 160 82 2 1 160 1 158 4.02e-42 140
MS.gene045658.t1 MTR_8g033220 43.750 160 89 1 1 160 1 159 5.51e-41 137
MS.gene045658.t1 MTR_8g033220 43.750 160 89 1 1 160 1 159 7.15e-41 137
MS.gene045658.t1 MTR_8g066260 43.452 168 80 2 1 161 1 160 1.71e-40 136
MS.gene045658.t1 MTR_8g097090 44.444 162 88 2 1 161 1 161 2.47e-38 131
MS.gene045658.t1 MTR_7g075850 45.963 161 84 2 1 160 1 159 4.62e-37 128
MS.gene045658.t1 MTR_3g084980 42.593 162 91 2 1 161 1 161 4.78e-37 127
MS.gene045658.t1 MTR_3g452380 42.500 160 88 3 1 159 16 172 7.28e-37 127
MS.gene045658.t1 MTR_7g016600 42.945 163 87 2 1 161 1 159 1.14e-36 127
MS.gene045658.t1 MTR_5g046790 41.916 167 82 3 1 160 1 159 1.17e-36 125
MS.gene045658.t1 MTR_4g109830 41.718 163 88 2 1 160 1 159 2.86e-36 125
MS.gene045658.t1 MTR_8g033270 44.172 163 83 3 1 160 1 158 5.87e-36 125
MS.gene045658.t1 MTR_4g102530 42.857 168 80 5 1 161 1 159 2.61e-35 122
MS.gene045658.t1 MTR_5g031000 44.720 161 85 2 1 161 1 157 3.18e-35 122
MS.gene045658.t1 MTR_5g031000 44.720 161 85 2 1 161 1 157 3.38e-35 122
MS.gene045658.t1 MTR_2g009890 44.304 158 85 2 1 158 1 155 6.99e-35 123
MS.gene045658.t1 MTR_6g015975 42.331 163 88 2 1 161 1 159 1.07e-34 122
MS.gene045658.t1 MTR_4g109810 41.212 165 86 2 1 161 1 158 4.81e-34 120
MS.gene045658.t1 MTR_3g005530 40.123 162 89 3 1 159 1 157 5.92e-34 119
MS.gene045658.t1 MTR_2g017865 41.250 160 90 3 1 159 16 172 1.02e-33 119
MS.gene045658.t1 MTR_7g016630 38.125 160 96 1 1 160 1 157 7.70e-32 114
MS.gene045658.t1 MTR_8g087860 39.623 159 94 2 1 159 17 173 1.80e-31 113
MS.gene045658.t1 MTR_3g088615 39.189 148 83 2 1 147 1 142 1.34e-30 109
MS.gene045658.t1 MTR_6g464720 39.877 163 88 3 1 158 1 158 1.13e-29 108
MS.gene045658.t1 MTR_1g038300 37.805 164 99 2 1 161 1 164 1.75e-29 108
MS.gene045658.t1 MTR_1g053070 38.650 163 88 4 1 156 1 158 9.62e-29 106
MS.gene045658.t1 MTR_5g046870 50.980 102 44 2 1 96 1 102 2.97e-28 101
MS.gene045658.t1 MTR_5g066180 40.506 158 86 4 1 156 1 152 9.29e-28 103
MS.gene045658.t1 MTR_1g101970 37.975 158 97 1 1 158 1 157 1.34e-27 102
MS.gene045658.t1 MTR_1g029670 37.838 148 85 2 1 147 1 142 1.56e-26 99.0
MS.gene045658.t1 MTR_0003s0590 39.506 162 86 4 1 156 1 156 1.63e-26 100
MS.gene045658.t1 MTR_5g032520 40.625 160 89 3 1 158 1 156 3.03e-26 99.8
MS.gene045658.t1 MTR_3g113030 35.849 159 95 3 1 158 1 153 1.38e-25 97.8
MS.gene045658.t1 MTR_4g093970 36.250 160 100 2 1 159 27 185 2.52e-25 97.4
MS.gene045658.t1 MTR_5g032150 42.647 136 72 3 1 134 1 132 4.30e-25 96.7
MS.gene045658.t1 MTR_5g066960 66.102 59 20 0 1 59 1 59 1.18e-24 90.9
MS.gene045658.t1 MTR_2g461710 66.102 59 20 0 1 59 1 59 4.72e-24 89.4
MS.gene045658.t1 MTR_5g021270 33.951 162 98 4 1 158 1 157 5.79e-23 91.3
MS.gene045658.t1 MTR_5g021270 33.951 162 98 4 1 158 1 157 5.92e-23 91.3
MS.gene045658.t1 MTR_4g093030 50.575 87 28 1 1 72 1 87 1.51e-21 85.5
MS.gene045658.t1 MTR_1g041615 42.268 97 53 1 16 109 20 116 5.69e-18 75.9
MS.gene045658.t1 MTR_3g102570 46.575 73 39 0 1 73 1 73 1.24e-17 78.2
MS.gene045658.t1 MTR_4g084740 42.169 83 48 0 1 83 1 83 1.54e-17 78.2
MS.gene045658.t1 MTR_8g051580 45.833 72 38 1 1 72 1 71 1.80e-15 70.5
MS.gene045658.t1 MTR_8g079502 41.667 84 46 2 1 84 1 81 4.31e-15 69.3
MS.gene045658.t1 MTR_1g063160 43.836 73 40 1 1 73 1 72 9.93e-15 68.2
MS.gene045658.t1 MTR_1g047550 44.444 72 39 1 1 72 1 71 1.71e-14 67.8
MS.gene045658.t1 MTR_2g093190 43.478 69 38 1 3 71 10 77 3.70e-14 67.8
MS.gene045658.t1 MTR_1g054265 43.836 73 40 1 1 73 1 72 5.85e-14 66.2
MS.gene045658.t1 MTR_4g131030 44.444 72 39 1 1 72 1 71 6.29e-14 67.0
MS.gene045658.t1 MTR_4g094638 32.727 110 71 2 1 110 1 107 1.42e-13 65.1
MS.gene045658.t1 MTR_2g105290 31.818 110 74 1 1 110 11 119 2.06e-13 64.7
MS.gene045658.t1 MTR_4g094632 39.474 76 45 1 1 76 1 75 2.10e-13 64.3
MS.gene045658.t1 MTR_3g030770 41.429 70 40 1 2 71 9 77 3.77e-13 65.1
MS.gene045658.t1 MTR_1g108510 41.429 70 40 1 2 71 9 77 4.17e-13 65.1
MS.gene045658.t1 MTR_1g106070 40.000 70 41 1 2 71 9 77 1.22e-12 62.8
MS.gene045658.t1 MTR_3g052920 40.000 70 41 1 2 71 9 77 1.26e-12 63.5
MS.gene045658.t1 MTR_5g045560 36.905 84 51 2 1 84 8 89 1.33e-12 63.5
MS.gene045658.t1 MTR_8g086290 38.356 73 44 1 2 74 12 83 1.39e-12 62.8
MS.gene045658.t1 MTR_2g030740 28.378 148 89 4 3 134 10 156 1.44e-12 63.5
MS.gene045658.t1 MTR_4g108720 41.333 75 43 1 1 74 1 75 1.44e-12 64.3
MS.gene045658.t1 MTR_1g105910 40.000 70 41 1 2 71 9 77 2.65e-12 62.8
MS.gene045658.t1 MTR_3g080940 34.694 98 58 3 1 98 8 99 3.19e-12 62.0
MS.gene045658.t1 MTR_8g043650 40.000 70 41 1 2 71 9 77 3.41e-12 62.4
MS.gene045658.t1 MTR_2g085280 41.429 70 40 1 2 71 9 77 3.93e-12 62.4
MS.gene045658.t1 MTR_2g085250 41.429 70 40 1 2 71 9 77 3.93e-12 62.4
MS.gene045658.t1 MTR_8g046350 40.278 72 42 1 1 72 1 71 4.21e-12 61.2
MS.gene045658.t1 MTR_1g077360 40.000 70 41 1 2 71 9 77 4.96e-12 62.0
MS.gene045658.t1 MTR_3g052870 40.000 70 41 1 2 71 9 77 5.21e-12 61.6
MS.gene045658.t1 MTR_7g028448 29.545 132 89 3 16 147 26 153 5.47e-12 60.8
MS.gene045658.t1 MTR_4g036915 29.545 132 89 3 16 147 26 153 5.47e-12 60.8
MS.gene045658.t1 MTR_1g012570 40.000 70 41 1 2 71 9 77 7.44e-12 61.6
MS.gene045658.t1 MTR_1g105920 40.000 70 41 1 2 71 9 77 7.98e-12 61.6
MS.gene045658.t1 MTR_1g108580 38.571 70 42 1 2 71 9 77 8.53e-12 61.2
MS.gene045658.t1 MTR_1g075600 40.000 70 41 1 2 71 9 77 1.74e-11 60.5
MS.gene045658.t1 MTR_5g041650 42.105 76 41 2 1 74 38 112 1.94e-11 61.2
MS.gene045658.t1 MTR_5g053390 40.000 70 41 1 2 71 9 77 2.15e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene045658.t1 AT1G71692 64.671 167 53 2 1 161 1 167 8.04e-67 202
MS.gene045658.t1 AT2G45660 45.399 163 81 4 1 160 1 158 5.37e-40 132
MS.gene045658.t1 AT2G45660 45.399 163 81 4 1 160 1 158 1.62e-39 133
MS.gene045658.t1 AT1G69120 42.500 160 91 1 1 160 1 159 1.09e-38 132
MS.gene045658.t1 AT1G24260 42.945 163 90 2 1 161 1 162 1.12e-38 132
MS.gene045658.t1 AT1G24260 42.945 163 91 1 1 161 1 163 1.29e-38 132
MS.gene045658.t1 AT1G69120 42.500 160 91 1 1 160 1 159 2.67e-38 131
MS.gene045658.t1 AT3G58780 44.375 160 85 3 1 159 16 172 3.12e-38 131
MS.gene045658.t1 AT3G58780 44.375 160 85 3 1 159 22 178 3.40e-38 131
MS.gene045658.t1 AT1G24260 43.750 160 88 1 1 158 1 160 4.04e-38 130
MS.gene045658.t1 AT2G42830 44.099 161 86 3 1 160 16 173 9.06e-38 129
MS.gene045658.t1 AT2G42830 43.750 160 86 3 1 159 16 172 1.20e-37 129
MS.gene045658.t1 AT3G58780 47.260 146 73 3 1 145 16 158 1.17e-36 127
MS.gene045658.t1 AT5G60910 41.718 163 88 2 1 160 1 159 1.23e-36 126
MS.gene045658.t1 AT1G26310 39.634 164 92 2 1 160 1 161 1.77e-36 126
MS.gene045658.t1 AT4G09960 43.226 155 84 3 1 154 1 152 1.93e-36 125
MS.gene045658.t1 AT4G09960 43.226 155 84 3 1 154 2 153 2.51e-36 125
MS.gene045658.t1 AT4G09960 43.226 155 84 3 1 154 11 162 3.70e-36 125
MS.gene045658.t1 AT4G09960 43.226 155 84 3 1 154 27 178 6.17e-36 125
MS.gene045658.t1 AT4G09960 44.828 145 76 3 1 144 1 142 6.63e-36 124
MS.gene045658.t1 AT2G45650 43.293 164 82 3 1 160 1 157 1.40e-35 124
MS.gene045658.t1 AT4G37940 40.994 161 92 3 1 161 1 158 3.88e-35 122
MS.gene045658.t1 AT4G09960 43.226 155 84 3 1 154 96 247 6.83e-35 124
MS.gene045658.t1 AT4G11880 40.625 160 89 2 1 158 1 156 1.14e-34 120
MS.gene045658.t1 AT4G11880 40.625 160 89 2 1 158 1 156 1.14e-34 120
MS.gene045658.t1 AT4G18960 41.509 159 89 3 2 159 18 173 1.16e-34 122
MS.gene045658.t1 AT3G58780 42.500 160 81 3 1 159 16 165 1.35e-34 121
MS.gene045658.t1 AT5G15800 42.857 161 91 1 1 161 1 160 1.60e-34 121
MS.gene045658.t1 AT2G03710 43.210 162 89 3 1 161 1 160 1.62e-34 119
MS.gene045658.t1 AT5G15800 42.857 161 91 1 1 161 1 160 2.40e-34 121
MS.gene045658.t1 AT3G02310 42.857 161 91 1 1 161 1 160 2.91e-34 119
MS.gene045658.t1 AT3G58780 38.587 184 86 3 1 159 16 197 4.89e-34 120
MS.gene045658.t1 AT4G22950 41.139 158 86 3 1 156 1 153 1.20e-33 117
MS.gene045658.t1 AT5G62165 38.608 158 95 2 1 158 1 156 1.34e-33 116
MS.gene045658.t1 AT5G62165 38.608 158 95 2 1 158 1 156 1.34e-33 116
MS.gene045658.t1 AT5G62165 38.608 158 95 2 1 158 1 156 1.34e-33 116
MS.gene045658.t1 AT2G03710 43.210 162 89 3 1 161 1 160 1.48e-33 119
MS.gene045658.t1 AT2G03710 43.210 162 89 3 1 161 1 160 1.54e-33 119
MS.gene045658.t1 AT4G37940 41.722 151 85 3 1 151 1 148 1.80e-33 117
MS.gene045658.t1 AT3G02310 42.857 161 91 1 1 161 1 160 2.07e-33 118
MS.gene045658.t1 AT5G62165 38.750 160 96 2 1 160 1 158 3.07e-33 117
MS.gene045658.t1 AT5G62165 38.750 160 96 2 1 160 1 158 3.07e-33 117
MS.gene045658.t1 AT5G62165 38.750 160 96 2 1 160 1 158 3.07e-33 117
MS.gene045658.t1 AT5G62165 40.541 148 86 2 1 148 1 146 4.76e-33 115
MS.gene045658.t1 AT5G62165 40.541 148 86 2 1 148 1 146 4.76e-33 115
MS.gene045658.t1 AT5G62165 40.541 148 86 2 1 148 1 146 4.76e-33 115
MS.gene045658.t1 AT5G62165 40.541 148 86 2 1 148 1 146 4.76e-33 115
MS.gene045658.t1 AT5G62165 40.541 148 86 2 1 148 1 146 4.76e-33 115
MS.gene045658.t1 AT4G22950 41.139 158 86 3 1 156 1 153 1.47e-32 115
MS.gene045658.t1 AT4G22950 41.139 158 86 3 1 156 1 153 1.47e-32 115
MS.gene045658.t1 AT3G57230 40.764 157 86 3 1 155 1 152 1.64e-32 116
MS.gene045658.t1 AT3G57230 40.764 157 86 3 1 155 1 152 1.64e-32 116
MS.gene045658.t1 AT4G11880 41.333 150 82 2 1 148 1 146 3.38e-32 114
MS.gene045658.t1 AT4G11880 41.333 150 82 2 1 148 1 146 3.38e-32 114
MS.gene045658.t1 AT3G30260 40.385 156 84 2 1 152 1 151 3.66e-32 115
MS.gene045658.t1 AT2G14210 42.262 168 81 2 1 161 1 159 4.79e-32 114
MS.gene045658.t1 AT3G61120 41.916 167 79 3 1 160 1 156 5.28e-32 115
MS.gene045658.t1 AT2G14210 42.262 168 81 2 1 161 1 159 6.85e-32 114
MS.gene045658.t1 AT5G13790 40.123 162 91 3 1 162 1 156 1.13e-31 114
MS.gene045658.t1 AT4G37940 40.940 149 85 3 1 149 1 146 1.31e-31 112
MS.gene045658.t1 AT5G51870 36.250 160 101 1 1 160 1 159 1.69e-31 112
MS.gene045658.t1 AT5G23260 39.506 162 93 2 1 161 1 158 1.77e-31 114
MS.gene045658.t1 AT5G23260 39.506 162 93 2 1 161 17 174 2.15e-31 114
MS.gene045658.t1 AT3G57230 41.259 143 77 3 1 141 1 138 2.51e-31 110
MS.gene045658.t1 AT5G51870 36.250 160 101 1 1 160 1 159 2.98e-31 112
MS.gene045658.t1 AT5G62165 40.972 144 83 2 1 144 1 142 4.82e-31 111
MS.gene045658.t1 AT5G62165 40.972 144 83 2 1 144 1 142 4.82e-31 111
MS.gene045658.t1 AT5G51870 36.250 160 101 1 1 160 11 169 4.97e-31 112
MS.gene045658.t1 AT5G13790 38.272 162 91 2 1 162 1 153 1.68e-30 111
MS.gene045658.t1 AT5G51870 37.838 148 91 1 1 148 1 147 5.64e-30 107
MS.gene045658.t1 AT5G51870 37.838 148 91 1 1 148 24 170 1.30e-29 107
MS.gene045658.t1 AT2G22630 37.725 167 89 3 1 161 1 158 1.48e-28 105
MS.gene045658.t1 AT2G22630 37.725 167 89 3 1 161 1 158 1.48e-28 105
MS.gene045658.t1 AT5G23260 39.474 152 87 2 1 151 1 148 1.57e-28 105
MS.gene045658.t1 AT5G51860 36.810 163 96 3 1 160 1 159 2.16e-28 104
MS.gene045658.t1 AT5G23260 38.889 162 89 3 1 161 17 169 2.18e-28 105
MS.gene045658.t1 AT5G51860 36.810 163 96 3 1 160 1 159 2.74e-28 104
MS.gene045658.t1 AT3G57390 36.905 168 99 2 1 162 1 167 1.22e-27 103
MS.gene045658.t1 AT3G57390 36.905 168 99 2 1 162 1 167 2.18e-27 103
MS.gene045658.t1 AT5G62165 58.667 75 30 1 1 75 1 74 5.61e-26 95.5
MS.gene045658.t1 AT2G22540 38.889 162 89 3 1 158 1 156 2.78e-25 97.4
MS.gene045658.t1 AT2G22540 38.889 162 89 3 1 158 1 156 2.78e-25 97.4
MS.gene045658.t1 AT5G20240 34.969 163 96 3 1 162 1 154 2.90e-25 96.7
MS.gene045658.t1 AT5G20240 35.135 148 89 2 1 147 1 142 1.28e-24 93.2
MS.gene045658.t1 AT4G24540 40.523 153 84 4 1 150 1 149 2.32e-24 94.7
MS.gene045658.t1 AT3G54340 36.364 165 90 4 1 160 1 155 2.54e-24 94.7
MS.gene045658.t1 AT2G22540 39.873 158 88 2 1 158 1 151 5.56e-24 94.0
MS.gene045658.t1 AT1G31140 36.250 160 101 1 1 159 1 160 1.05e-23 92.8
MS.gene045658.t1 AT1G31140 37.888 161 95 3 1 159 1 158 1.79e-23 92.0
MS.gene045658.t1 AT5G65070 33.939 165 92 5 1 161 1 152 9.38e-23 89.7
MS.gene045658.t1 AT5G10140 31.737 167 87 3 1 158 1 149 3.80e-22 87.8
MS.gene045658.t1 AT5G65060 33.129 163 96 4 1 161 1 152 4.19e-22 87.8
MS.gene045658.t1 AT5G65060 33.129 163 96 4 1 161 1 152 5.04e-22 87.8
MS.gene045658.t1 AT5G65050 34.591 159 89 4 1 156 1 147 5.26e-22 87.4
MS.gene045658.t1 AT5G65050 34.591 159 89 4 1 156 1 147 1.52e-21 86.3
MS.gene045658.t1 AT5G65050 34.591 159 89 4 1 156 1 147 1.81e-21 86.3
MS.gene045658.t1 AT5G65080 31.013 158 100 2 1 158 8 156 2.71e-21 85.9
MS.gene045658.t1 AT5G65070 48.571 70 36 0 1 70 1 70 3.99e-21 84.3
MS.gene045658.t1 AT5G65070 31.746 189 97 5 1 162 1 184 4.22e-21 85.9
MS.gene045658.t1 AT5G65070 31.915 188 96 5 1 161 1 183 4.48e-21 86.3
MS.gene045658.t1 AT5G10140 32.484 157 79 3 1 148 1 139 4.66e-21 84.7
MS.gene045658.t1 AT5G10140 32.484 157 79 3 1 148 1 139 7.11e-21 84.7
MS.gene045658.t1 AT5G10140 32.484 157 79 3 1 148 1 139 1.14e-20 84.3
MS.gene045658.t1 AT5G65060 31.902 163 87 3 1 161 1 141 2.50e-20 83.2
MS.gene045658.t1 AT5G65050 33.962 159 79 4 1 156 1 136 5.20e-20 82.4
MS.gene045658.t1 AT5G65070 31.551 187 99 6 1 161 1 184 2.19e-19 81.6
MS.gene045658.t1 AT1G77080 33.333 162 97 3 1 161 1 152 4.44e-19 79.7
MS.gene045658.t1 AT1G77080 33.333 162 97 3 1 161 1 152 5.54e-19 79.3
MS.gene045658.t1 AT1G77080 33.333 162 97 3 1 161 1 152 1.06e-18 79.3
MS.gene045658.t1 AT5G65080 29.936 157 100 2 1 157 8 154 8.83e-17 74.3
MS.gene045658.t1 AT1G77080 29.570 186 99 4 1 161 1 179 8.83e-17 74.7
MS.gene045658.t1 AT1G77980 44.595 74 41 0 1 74 1 74 1.56e-16 75.5
MS.gene045658.t1 AT4G37435 33.333 141 87 2 1 137 1 138 2.56e-16 72.8
MS.gene045658.t1 AT1G22130 42.667 75 43 0 1 75 1 75 5.20e-16 73.9
MS.gene045658.t1 AT1G77080 32.927 164 91 5 1 161 1 148 5.22e-16 72.0
MS.gene045658.t1 AT1G77080 33.129 163 90 5 1 160 1 147 6.19e-16 70.9
MS.gene045658.t1 AT1G72350 47.887 71 34 1 2 72 43 110 6.02e-15 69.7
MS.gene045658.t1 AT2G34440 34.259 108 67 2 1 105 1 107 1.16e-14 68.2
MS.gene045658.t1 AT1G77950 25.140 179 95 2 1 140 1 179 8.23e-14 67.0
MS.gene045658.t1 AT1G77950 25.140 179 95 2 1 140 1 179 8.23e-14 67.0
MS.gene045658.t1 AT1G77950 25.140 179 95 2 1 140 1 179 8.23e-14 67.0
MS.gene045658.t1 AT1G77950 25.140 179 95 2 1 140 1 179 8.23e-14 67.0
MS.gene045658.t1 AT2G24840 42.254 71 40 1 1 71 62 131 9.51e-14 67.0
MS.gene045658.t1 AT1G01530 48.276 58 30 0 1 58 6 63 4.44e-13 65.1
MS.gene045658.t1 AT3G66656 46.552 58 31 0 1 58 1 58 5.05e-13 63.9
MS.gene045658.t1 AT2G03060 44.000 75 41 1 1 74 1 75 8.70e-13 65.1
MS.gene045658.t1 AT2G03060 44.000 75 41 1 1 74 1 75 8.70e-13 65.1
MS.gene045658.t1 AT2G03060 44.000 75 41 1 1 74 1 75 8.70e-13 65.1
MS.gene045658.t1 AT2G03060 44.000 75 41 1 1 74 1 75 9.04e-13 65.1
MS.gene045658.t1 AT4G36590 30.588 170 95 6 2 160 7 164 1.54e-12 63.5
MS.gene045658.t1 AT1G18750 41.333 75 43 1 1 74 1 75 2.88e-12 63.5
MS.gene045658.t1 AT1G18750 41.333 75 43 1 1 74 1 75 3.04e-12 63.5
MS.gene045658.t1 AT1G18750 41.333 75 43 1 1 74 1 75 3.05e-12 63.5
MS.gene045658.t1 AT1G69540 39.189 74 45 0 1 74 1 74 1.51e-11 61.6
MS.gene045658.t1 AT1G69540 39.189 74 45 0 1 74 1 74 2.09e-11 61.2
MS.gene045658.t1 AT1G65360 43.103 58 33 0 1 58 6 63 4.00e-11 59.7

Find 42 sgRNAs with CRISPR-Local

Find 208 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATTTGTTTGGAGGAGGATT+AGG 0.243362 4.3:+64109742 MS.gene045658:CDS
CGTGCTTCAGTTACAGCTTC+AGG 0.305131 4.3:-64106281 None:intergenic
GTGCTTTGCGATGCTGAAAT+TGG 0.317759 4.3:+64105710 MS.gene045658:CDS
TTGAAAAGAACCTCGAAAAC+TGG 0.326345 4.3:+64109794 MS.gene045658:CDS
TAACCTTATCCCTCAAAGTT+TGG 0.340993 4.3:-64109999 None:intergenic
ATTTGTTTGGAGGAGGATTA+GGG 0.367328 4.3:+64109743 MS.gene045658:CDS
AATCCAAACTTTGAGGGATA+AGG 0.388651 4.3:+64109996 MS.gene045658:CDS
ATTATTGGCAGGTATTTGTT+TGG 0.401347 4.3:+64109730 MS.gene045658:intron
TGGAGGAGGATTAGGGACTA+TGG 0.415641 4.3:+64109750 MS.gene045658:CDS
GGCAGGTATTTGTTTGGAGG+AGG 0.434879 4.3:+64109736 MS.gene045658:intron
AAAGTCACTTGCCTGTGCAC+TGG 0.436750 4.3:-64105641 None:intergenic
AGAGATCGATACCCTGCAAA+AGG 0.461508 4.3:+64108755 MS.gene045658:CDS
AAGTCACTTGCCTGTGCACT+GGG 0.471642 4.3:-64105640 None:intergenic
ACTTTCTGTAAGCGCCGAGC+GGG 0.485647 4.3:+64105659 MS.gene045658:CDS
ATTGGCAGGTATTTGTTTGG+AGG 0.487880 4.3:+64109733 MS.gene045658:intron
CCGAGCGGGGCTTCTAAAGA+AGG 0.488715 4.3:+64105673 MS.gene045658:CDS
CACAAGAAATCCAAACTTTG+AGG 0.490472 4.3:+64109989 MS.gene045658:CDS
CTCTATGAACTCGCCACCAA+AGG 0.491747 4.3:+64105761 MS.gene045658:CDS
CTTCTCTATTAGCCCTTGCA+TGG 0.492434 4.3:-64106231 None:intergenic
TGAAGCACGTCCTCTTGTAT+TGG 0.509803 4.3:+64106295 MS.gene045658:CDS
TTCATAGAGCTTTCCATGAG+CGG 0.532053 4.3:-64105747 None:intergenic
AATCGACATGGCTCGCGGGA+AGG 0.534307 4.3:+64105595 None:intergenic
ACAAGAAATCCAAACTTTGA+GGG 0.536382 4.3:+64109990 MS.gene045658:CDS
ATACCCTGCAAAAGGGTCTC+CGG 0.540964 4.3:+64108763 MS.gene045658:CDS
CCTTCTTTAGAAGCCCCGCT+CGG 0.544771 4.3:-64105673 None:intergenic
GTATAATGTTCGCTCAATGA+AGG 0.550286 4.3:+64109819 MS.gene045658:CDS
TCTATGAACTCGCCACCAAA+GGG 0.554348 4.3:+64105762 MS.gene045658:CDS
GAATTGAGAACCCAGTGCAC+AGG 0.556607 4.3:+64105630 MS.gene045658:CDS
ATGAAATGAAGAACCATGCA+AGG 0.564040 4.3:+64106218 MS.gene045658:intron
GGGGCTTCTAAAGAAGGCTA+AGG 0.573499 4.3:+64105679 MS.gene045658:CDS
TCATATCTAGGATGCTAAAG+AGG 0.576504 4.3:+64108713 MS.gene045658:intron
AGGATTAGGGACTATGGCAA+TGG 0.589394 4.3:+64109756 MS.gene045658:CDS
GAGATCGATACCCTGCAAAA+GGG 0.590483 4.3:+64108756 MS.gene045658:CDS
AAAAGAGACATACCCTTTGG+TGG 0.593726 4.3:-64105774 None:intergenic
CTCGCGGGAAGGTTCAGCTA+AGG 0.601343 4.3:+64105606 MS.gene045658:CDS
GATCTCTTGCTTGAGCACAT+TGG 0.611486 4.3:-64108739 None:intergenic
CTTTCTGTAAGCGCCGAGCG+GGG 0.616522 4.3:+64105660 MS.gene045658:CDS
TAGAGACATACCAATACAAG+AGG 0.623099 4.3:-64106305 None:intergenic
TGAAATGAAGAACCATGCAA+GGG 0.639061 4.3:+64106219 MS.gene045658:intron
GACTTTCTGTAAGCGCCGAG+CGG 0.650769 4.3:+64105658 MS.gene045658:CDS
AAGTACTTGAAGTTCACACG+AGG 0.730119 4.3:+64106251 MS.gene045658:CDS
AGTACTTGAAGTTCACACGA+GGG 0.748606 4.3:+64106252 MS.gene045658:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTAATTAATATTATAAAA+TGG + chr4.3:64109578-64109597 MS.gene045658:intron 0.0%
!! AAAGAATTAAGAAAATTAAA+CGG + chr4.3:64109706-64109725 MS.gene045658:intron 10.0%
!! AAGTAAAAATATATCAATAA+GGG - chr4.3:64106942-64106961 None:intergenic 10.0%
!! TTACAAATTATTATATAAAG+TGG + chr4.3:64108153-64108172 MS.gene045658:intron 10.0%
!!! AAAAACAATTTTTTTTTACA+GGG + chr4.3:64109170-64109189 MS.gene045658:intron 10.0%
!!! AAAAATAATAATACTCTTTT+CGG - chr4.3:64107227-64107246 None:intergenic 10.0%
!!! AAAAATTGATTCAAATTAAA+TGG - chr4.3:64109262-64109281 None:intergenic 10.0%
!!! AACAAATTTTTTTTTTTACA+AGG - chr4.3:64108935-64108954 None:intergenic 10.0%
!!! TTTTTAAATAAAAAAATGTC+AGG - chr4.3:64107679-64107698 None:intergenic 10.0%
!! AAAAAAAAAAATGGAAATTG+CGG + chr4.3:64107948-64107967 MS.gene045658:intron 15.0%
!! AAAAAAATTGTTTGAGTAAT+AGG - chr4.3:64107066-64107085 None:intergenic 15.0%
!! AAACGACATTTAAAAATAAA+CGG - chr4.3:64106968-64106987 None:intergenic 15.0%
!! ATTTAAATTTGGCTAAAATA+TGG + chr4.3:64108871-64108890 MS.gene045658:intron 15.0%
!! CTAGAACAAAAAAAAAAAAA+TGG + chr4.3:64107939-64107958 MS.gene045658:intron 15.0%
!! GAACATATTATAAATAATTG+TGG - chr4.3:64107370-64107389 None:intergenic 15.0%
!! GAAGTAAAAATATATCAATA+AGG - chr4.3:64106943-64106962 None:intergenic 15.0%
!!! AAAAAAACAAAATATTTTGC+AGG - chr4.3:64109067-64109086 None:intergenic 15.0%
!!! AAAAAACAAAAAATTTTGCA+GGG - chr4.3:64108964-64108983 None:intergenic 15.0%
!!! AAAAAACAAAATATTTTGCA+GGG - chr4.3:64109066-64109085 None:intergenic 15.0%
!!! ACATTAGATTATTATTTCTT+TGG + chr4.3:64109440-64109459 MS.gene045658:intron 15.0%
!!! ATTTTAGCCAAATTTAAATT+AGG - chr4.3:64108870-64108889 None:intergenic 15.0%
!!! CAAAAACAATTTTTTTTTAC+AGG + chr4.3:64109169-64109188 MS.gene045658:intron 15.0%
!!! CTGTAAAAAAAAATTGTTTT+TGG - chr4.3:64109171-64109190 None:intergenic 15.0%
!!! GTTTAATTTTCTTAATTCTT+TGG - chr4.3:64109707-64109726 None:intergenic 15.0%
!!! TAAAAAACAAAAAATTTTGC+AGG - chr4.3:64108965-64108984 None:intergenic 15.0%
!!! TACTCAAACAATTTTTTTTT+TGG + chr4.3:64107068-64107087 MS.gene045658:intron 15.0%
!!! TTATCTGATGATATTATTTT+TGG + chr4.3:64108653-64108672 MS.gene045658:intron 15.0%
!! ATATGAATGATTCAATACAA+TGG - chr4.3:64109519-64109538 None:intergenic 20.0%
!! GAAACATTTAAACTCTTTAA+TGG - chr4.3:64109292-64109311 None:intergenic 20.0%
!! GAAATTTAAAGGCTAAAATA+TGG - chr4.3:64109234-64109253 None:intergenic 20.0%
!! TAACATGCCTAATTTAAATT+TGG + chr4.3:64108860-64108879 MS.gene045658:intron 20.0%
!! TATATATGACATCAAATGAT+AGG + chr4.3:64107394-64107413 MS.gene045658:intron 20.0%
!! TATGAATGATTCAATACAAT+GGG - chr4.3:64109518-64109537 None:intergenic 20.0%
!! TGTTGATATATATATATACC+CGG + chr4.3:64106501-64106520 MS.gene045658:intron 20.0%
!!! ACAAAAACAAAAAATTTTGC+AGG + chr4.3:64109143-64109162 MS.gene045658:intron 20.0%
!!! AGTGTTTCAATAAAATTTTG+CGG - chr4.3:64108050-64108069 None:intergenic 20.0%
!!! ATGATTTTAAATTGTTGTTG+CGG + chr4.3:64108001-64108020 MS.gene045658:intron 20.0%
!!! ATTGATTCAAATTAAATGGA+TGG - chr4.3:64109258-64109277 None:intergenic 20.0%
!!! CAAAAACAAAAAATTTTGCA+GGG + chr4.3:64109144-64109163 MS.gene045658:intron 20.0%
!!! CTATTTTACAAAACAACAAA+TGG + chr4.3:64106865-64106884 MS.gene045658:intron 20.0%
!!! TATTCAAAAGACAATGTTTT+GGG + chr4.3:64106753-64106772 MS.gene045658:intron 20.0%
!!! TTATTCAAAAGACAATGTTT+TGG + chr4.3:64106752-64106771 MS.gene045658:intron 20.0%
!!! TTGATGACTTTTCAATATTT+TGG - chr4.3:64108820-64108839 None:intergenic 20.0%
! AAACCACTATTATATAGAAC+CGG - chr4.3:64107127-64107146 None:intergenic 25.0%
! AAATGGATGGAGAAATTTAA+AGG - chr4.3:64109245-64109264 None:intergenic 25.0%
! AACTTTCATGAAACTAAATC+CGG + chr4.3:64107105-64107124 MS.gene045658:intron 25.0%
! AATTAAAAGAGTAGTGATAG+TGG + chr4.3:64106419-64106438 MS.gene045658:intron 25.0%
! AATTGTTTGAGTAATAGGAA+AGG - chr4.3:64107061-64107080 None:intergenic 25.0%
! AGAAAATTAAACGGCATTAT+TGG + chr4.3:64109715-64109734 MS.gene045658:intron 25.0%
! ATGCAAATCATGACAAAAAT+GGG - chr4.3:64109002-64109021 None:intergenic 25.0%
! ATGTAAAGTTAAGCAATGTA+CGG - chr4.3:64105953-64105972 None:intergenic 25.0%
! ATTGTTTGAGTAATAGGAAA+GGG - chr4.3:64107060-64107079 None:intergenic 25.0%
! ATTTAAAAAAATCAGGACGA+GGG + chr4.3:64107690-64107709 MS.gene045658:intron 25.0%
! GAAAATTCATTTACTTCTGT+TGG + chr4.3:64107750-64107769 MS.gene045658:intron 25.0%
! GAAATCCAAACAAATATGTT+TGG + chr4.3:64105991-64106010 MS.gene045658:intron 25.0%
! GAAATCCAAACATATTTGTT+TGG - chr4.3:64105999-64106018 None:intergenic 25.0%
! TAAATCATTCTTTCAAACTG+CGG - chr4.3:64108465-64108484 None:intergenic 25.0%
! TATGCAAATCATGACAAAAA+TGG - chr4.3:64109003-64109022 None:intergenic 25.0%
! TATTTAAAAAAATCAGGACG+AGG + chr4.3:64107689-64107708 MS.gene045658:intron 25.0%
! TCATTTATACAACAAGCTTT+CGG - chr4.3:64107268-64107287 None:intergenic 25.0%
! TTAGAGAAGATGTTAGAAAA+AGG - chr4.3:64107520-64107539 None:intergenic 25.0%
! TTCTATGAGATAAAGTATGT+CGG + chr4.3:64106590-64106609 MS.gene045658:intron 25.0%
!! AGAATTTTCATTAGATCGAA+AGG + chr4.3:64108285-64108304 MS.gene045658:intron 25.0%
!! AGTATGGTCAGTAAATTTTA+TGG - chr4.3:64108192-64108211 None:intergenic 25.0%
!! CTATATATTGCAAAGTTTTG+CGG - chr4.3:64105879-64105898 None:intergenic 25.0%
!! TTTTCTCTCTCTTAATTAGT+GGG + chr4.3:64109859-64109878 MS.gene045658:intron 25.0%
!! TTTTTCTCTCTCTTAATTAG+TGG + chr4.3:64109858-64109877 MS.gene045658:intron 25.0%
!!! ATAATTTGCTACCTTGATTA+AGG - chr4.3:64107454-64107473 None:intergenic 25.0%
!!! CTTACAGTTTTAAGTAAAAG+AGG + chr4.3:64107480-64107499 MS.gene045658:intron 25.0%
!!! GGTTCTGAAAATTTCAATTT+TGG + chr4.3:64108322-64108341 MS.gene045658:intron 25.0%
!!! TATATACGATCCATTTTTAG+AGG - chr4.3:64107583-64107602 None:intergenic 25.0%
!!! TTTTTTGCATGTTCATATCT+AGG + chr4.3:64108701-64108720 MS.gene045658:intron 25.0%
AAAACCTCTTATACTTCACT+AGG + chr4.3:64107811-64107830 MS.gene045658:intron 30.0%
AAAATGGATCGTATATAGAG+TGG + chr4.3:64107586-64107605 MS.gene045658:intron 30.0%
AAGTAATGACACCTTAATCA+AGG + chr4.3:64107440-64107459 MS.gene045658:intron 30.0%
AATAAGGGATATTGTGAAGA+GGG - chr4.3:64106927-64106946 None:intergenic 30.0%
AATCCGGTTCTATATAATAG+TGG + chr4.3:64107121-64107140 MS.gene045658:intron 30.0%
ACAAGAAATCCAAACTTTGA+GGG + chr4.3:64109990-64110009 MS.gene045658:CDS 30.0%
AGAAAATTTGCACTCTAGTA+TGG - chr4.3:64108208-64108227 None:intergenic 30.0%
AGAGAGAGAAAAAAGTTTGT+TGG - chr4.3:64109851-64109870 None:intergenic 30.0%
AGGGAATGACACTTAAATTA+AGG + chr4.3:64107709-64107728 MS.gene045658:intron 30.0%
AGTGACCAAAATAAACTTGA+TGG - chr4.3:64106160-64106179 None:intergenic 30.0%
ATTATTGGCAGGTATTTGTT+TGG + chr4.3:64109730-64109749 MS.gene045658:intron 30.0%
CATCTGTAGTTCAAAGTATA+AGG - chr4.3:64109959-64109978 None:intergenic 30.0%
CCTTGATTTCTATATTTGAC+CGG - chr4.3:64106523-64106542 None:intergenic 30.0%
CGCAAAACTTTGCAATATAT+AGG + chr4.3:64105877-64105896 MS.gene045658:intron 30.0%
CGGTTGCAAAAAATAAACAT+GGG - chr4.3:64108030-64108049 None:intergenic 30.0%
CTTATTGTGTGAAATTCATG+TGG + chr4.3:64107550-64107569 MS.gene045658:intron 30.0%
CTTGATTTCTATATTTGACC+GGG - chr4.3:64106522-64106541 None:intergenic 30.0%
GTGACCAAAATAAACTTGAT+GGG - chr4.3:64106159-64106178 None:intergenic 30.0%
GTGACTAAATTTGTCTAATG+CGG + chr4.3:64108364-64108383 MS.gene045658:intron 30.0%
GTGTGTTACAAGAAAATCTA+GGG - chr4.3:64108106-64108125 None:intergenic 30.0%
TCTATGAGATAAAGTATGTC+GGG + chr4.3:64106591-64106610 MS.gene045658:intron 30.0%
TGCAAATCATGACAAAAATG+GGG - chr4.3:64109001-64109020 None:intergenic 30.0%
TGCACGCTTAAATTATCAAA+AGG - chr4.3:64107023-64107042 None:intergenic 30.0%
TGCATCATACATAGTGTTAT+AGG - chr4.3:64106021-64106040 None:intergenic 30.0%
TGTATGTAACTTAGAAGAGT+TGG - chr4.3:64107837-64107856 None:intergenic 30.0%
TGTGTGTTACAAGAAAATCT+AGG - chr4.3:64108107-64108126 None:intergenic 30.0%
! ATAGCCCATCAAGTTTATTT+TGG + chr4.3:64106152-64106171 MS.gene045658:intron 30.0%
! ATTTAGAGCTCTACATTGTA+GGG + chr4.3:64106125-64106144 MS.gene045658:intron 30.0%
! CAGTAAATTTTATGGTAGCA+CGG - chr4.3:64108184-64108203 None:intergenic 30.0%
! TACTTTTAGCAATCTCTCAA+CGG - chr4.3:64108265-64108284 None:intergenic 30.0%
! TGAACCCATTTTGTAGTTTT+TGG + chr4.3:64109039-64109058 MS.gene045658:intron 30.0%
! TGGATATCATCCTCTAAAAA+TGG + chr4.3:64107570-64107589 MS.gene045658:intron 30.0%
! TTTAGGGTTATGCAAATGAT+CGG - chr4.3:64105832-64105851 None:intergenic 30.0%
!!! TTGTTTTTGTAAAAAGTCCC+TGG - chr4.3:64109133-64109152 None:intergenic 30.0%
AATTAAACGGCATTATTGGC+AGG + chr4.3:64109719-64109738 MS.gene045658:intron 35.0%
AGGGACCAAAAACTACAAAA+TGG - chr4.3:64109047-64109066 None:intergenic 35.0%
ATGAAATGAAGAACCATGCA+AGG + chr4.3:64106218-64106237 MS.gene045658:intron 35.0%
ATTTGTTTGGAGGAGGATTA+GGG + chr4.3:64109743-64109762 MS.gene045658:CDS 35.0%
CAATAAGGGATATTGTGAAG+AGG - chr4.3:64106928-64106947 None:intergenic 35.0%
CACAAGAAATCCAAACTTTG+AGG + chr4.3:64109989-64110008 MS.gene045658:CDS 35.0%
CCAAAAATGCACTTCATTAG+CGG + chr4.3:64107169-64107188 MS.gene045658:intron 35.0%
CCGGTCAAATATAGAAATCA+AGG + chr4.3:64106520-64106539 MS.gene045658:intron 35.0%
GAAAAAAGAGACATACCCTT+TGG - chr4.3:64105780-64105799 None:intergenic 35.0%
GATAGCATTGTTAGTGCATT+AGG - chr4.3:64108391-64108410 None:intergenic 35.0%
GCGGTTGCAAAAAATAAACA+TGG - chr4.3:64108031-64108050 None:intergenic 35.0%
GGGACCAAAAACTACAAAAT+GGG - chr4.3:64109046-64109065 None:intergenic 35.0%
GTATAATGTTCGCTCAATGA+AGG + chr4.3:64109819-64109838 MS.gene045658:CDS 35.0%
TAACCTTATCCCTCAAAGTT+TGG - chr4.3:64110002-64110021 None:intergenic 35.0%
TACACACACTACATCGTTTA+GGG - chr4.3:64105848-64105867 None:intergenic 35.0%
TAGAGACATACCAATACAAG+AGG - chr4.3:64106308-64106327 None:intergenic 35.0%
TATTTGTTTGGAGGAGGATT+AGG + chr4.3:64109742-64109761 MS.gene045658:CDS 35.0%
TGAAATGAAGAACCATGCAA+GGG + chr4.3:64106219-64106238 MS.gene045658:intron 35.0%
TGCTAGATGTAGAAGCAAAA+TGG + chr4.3:64106362-64106381 MS.gene045658:intron 35.0%
TTACACACACTACATCGTTT+AGG - chr4.3:64105849-64105868 None:intergenic 35.0%
TTGAAAAGAACCTCGAAAAC+TGG + chr4.3:64109794-64109813 MS.gene045658:CDS 35.0%
TTGTCTAAGCATTAAGCACA+AGG - chr4.3:64106707-64106726 None:intergenic 35.0%
TTTACATATAACCAGCGTAG+CGG + chr4.3:64105966-64105985 MS.gene045658:intron 35.0%
! AATCCAAACTTTGAGGGATA+AGG + chr4.3:64109996-64110015 MS.gene045658:CDS 35.0%
! CATTATACATCCAGTTTTCG+AGG - chr4.3:64109807-64109826 None:intergenic 35.0%
! CATTTAGAGCTCTACATTGT+AGG + chr4.3:64106124-64106143 MS.gene045658:intron 35.0%
! TCATATCTAGGATGCTAAAG+AGG + chr4.3:64108713-64108732 MS.gene045658:intron 35.0%
! TTTGTCATGATTTGCATACG+CGG + chr4.3:64109005-64109024 MS.gene045658:intron 35.0%
! TTTTGTAAAAAGTCCCTGGA+GGG - chr4.3:64109129-64109148 None:intergenic 35.0%
! TTTTTGTAAAAAGTCCCTGG+AGG - chr4.3:64109130-64109149 None:intergenic 35.0%
!! AAGAGTAGTGATAGTGGTAT+TGG + chr4.3:64106425-64106444 MS.gene045658:intron 35.0%
!! AGAAAATCTAGGGCTTGTTA+CGG - chr4.3:64108096-64108115 None:intergenic 35.0%
!! AGCTCTAAATGCATTGAGTA+CGG - chr4.3:64106115-64106134 None:intergenic 35.0%
!! CAAAAGACAATGTTTTGGGT+TGG + chr4.3:64106757-64106776 MS.gene045658:intron 35.0%
!! TTTTGAAAATAGTCCCTCCA+GGG + chr4.3:64109113-64109132 MS.gene045658:intron 35.0%
!! TTTTTGAAAATAGTCCCTCC+AGG + chr4.3:64109112-64109131 MS.gene045658:intron 35.0%
!!! TGTCTTGTTTTGACACATGT+AGG + chr4.3:64106561-64106580 MS.gene045658:intron 35.0%
AAAAGAGACATACCCTTTGG+TGG - chr4.3:64105777-64105796 None:intergenic 40.0%
AAGTACTTGAAGTTCACACG+AGG + chr4.3:64106251-64106270 MS.gene045658:CDS 40.0%
AGACTTCAGAGGATCTATAG+TGG + chr4.3:64106078-64106097 MS.gene045658:intron 40.0%
AGTACTTGAAGTTCACACGA+GGG + chr4.3:64106252-64106271 MS.gene045658:CDS 40.0%
ATTGGCAGGTATTTGTTTGG+AGG + chr4.3:64109733-64109752 MS.gene045658:intron 40.0%
CAAAACGAGGCATATTTGCA+GGG + chr4.3:64109201-64109220 MS.gene045658:intron 40.0%
CAAAACGAGGCATATTTGCA+GGG - chr4.3:64109220-64109201 None:intergenic 40.0%
CAAGGACTAAAACCAAAACG+AGG - chr4.3:64108917-64108936 None:intergenic 40.0%
CAAGGTTAACAACAAAGCAG+TGG - chr4.3:64106689-64106708 None:intergenic 40.0%
CTGTTAGATGAAACTCACGT+GGG - chr4.3:64107617-64107636 None:intergenic 40.0%
CTTGTGCTAGAACAGAAGAT+AGG + chr4.3:64108068-64108087 MS.gene045658:intron 40.0%
GATCGAAAGGAGATTGAGAT+TGG + chr4.3:64108298-64108317 MS.gene045658:intron 40.0%
TACAATGGGAACAACGACAT+TGG - chr4.3:64109504-64109523 None:intergenic 40.0%
TCTGTTAGATGAAACTCACG+TGG - chr4.3:64107618-64107637 None:intergenic 40.0%
TGTGAAGAGGGTAGGAATAA+GGG - chr4.3:64106915-64106934 None:intergenic 40.0%
TTCATAGAGCTTTCCATGAG+CGG - chr4.3:64105750-64105769 None:intergenic 40.0%
TTGGCCTAGTGAAGTATAAG+AGG - chr4.3:64107818-64107837 None:intergenic 40.0%
TTGTGAAGAGGGTAGGAATA+AGG - chr4.3:64106916-64106935 None:intergenic 40.0%
! CCGCTAATGAAGTGCATTTT+TGG - chr4.3:64107172-64107191 None:intergenic 40.0%
! GCTCTAAATGCATTGAGTAC+GGG - chr4.3:64106114-64106133 None:intergenic 40.0%
! GTGGTATTGGATGCTCTAAT+TGG + chr4.3:64106438-64106457 MS.gene045658:intron 40.0%
!! AAAATCTAGGGCTTGTTACG+GGG - chr4.3:64108094-64108113 None:intergenic 40.0%
!! GAAAATCTAGGGCTTGTTAC+GGG - chr4.3:64108095-64108114 None:intergenic 40.0%
AGAGATCGATACCCTGCAAA+AGG + chr4.3:64108755-64108774 MS.gene045658:CDS 45.0%
AGGATTAGGGACTATGGCAA+TGG + chr4.3:64109756-64109775 MS.gene045658:CDS 45.0%
AGGGATATTGTGAAGAGGGT+AGG - chr4.3:64106923-64106942 None:intergenic 45.0%
CAATTGCAGTGTGATTGCAG+TGG + chr4.3:64108436-64108455 MS.gene045658:intron 45.0%
CAGGGACTAAAACCAAAACG+AGG + chr4.3:64109188-64109207 MS.gene045658:intron 45.0%
CCAAAACGAGGCATATTTGC+AGG + chr4.3:64109200-64109219 MS.gene045658:intron 45.0%
CCAAAACGAGGCATATTTGC+AGG - chr4.3:64109219-64109200 None:intergenic 45.0%
CGAAAGGAGATTGAGATTGG+TGG + chr4.3:64108301-64108320 MS.gene045658:intron 45.0%
CGAGAGTCAAATGTACGTAC+CGG - chr4.3:64108785-64108804 None:intergenic 45.0%
CTTCTCTATTAGCCCTTGCA+TGG - chr4.3:64106234-64106253 None:intergenic 45.0%
GAGATCGATACCCTGCAAAA+GGG + chr4.3:64108756-64108775 MS.gene045658:CDS 45.0%
GATCTCTTGCTTGAGCACAT+TGG - chr4.3:64108742-64108761 None:intergenic 45.0%
GCATATAGTGCAGACTTCAG+AGG + chr4.3:64106067-64106086 MS.gene045658:intron 45.0%
GTGCTTTGCGATGCTGAAAT+TGG + chr4.3:64105710-64105729 MS.gene045658:CDS 45.0%
TCTATGAACTCGCCACCAAA+GGG + chr4.3:64105762-64105781 MS.gene045658:CDS 45.0%
TGAAGCACGTCCTCTTGTAT+TGG + chr4.3:64106295-64106314 MS.gene045658:CDS 45.0%
! CCTGCAAATATGCCTCGTTT+TGG + chr4.3:64108902-64108921 MS.gene045658:intron 45.0%
! CCTGCAAATATGCCTCGTTT+TGG - chr4.3:64108921-64108902 None:intergenic 45.0%
! TTGCAAAGTTTTGCGGTGCA+CGG - chr4.3:64105872-64105891 None:intergenic 45.0%
!! TGTCGGGTTTTGACACATGT+AGG + chr4.3:64106607-64106626 MS.gene045658:intron 45.0%
!!! CTTGTCATTTTCTCCGCTCA+TGG + chr4.3:64105734-64105753 MS.gene045658:CDS 45.0%
!!! AATATTTTGTTTTTTTAAAA+AGG + chr4.3:64109071-64109090 MS.gene045658:intron 5.0%
!!! TAAAAAAAAAAATTTGTTTT+TGG + chr4.3:64108937-64108956 MS.gene045658:intron 5.0%
!!! TTTTTTTATTTAAAAAAATC+AGG + chr4.3:64107683-64107702 MS.gene045658:intron 5.0%
AAAGTCACTTGCCTGTGCAC+TGG - chr4.3:64105644-64105663 None:intergenic 50.0%
AAGTCACTTGCCTGTGCACT+GGG - chr4.3:64105643-64105662 None:intergenic 50.0%
ATACCCTGCAAAAGGGTCTC+CGG + chr4.3:64108763-64108782 MS.gene045658:CDS 50.0%
CGTGCTTCAGTTACAGCTTC+AGG - chr4.3:64106284-64106303 None:intergenic 50.0%
CTCTATGAACTCGCCACCAA+AGG + chr4.3:64105761-64105780 MS.gene045658:CDS 50.0%
GAATTGAGAACCCAGTGCAC+AGG + chr4.3:64105630-64105649 MS.gene045658:CDS 50.0%
GGCAGGTATTTGTTTGGAGG+AGG + chr4.3:64109736-64109755 MS.gene045658:intron 50.0%
TGGAGGAGGATTAGGGACTA+TGG + chr4.3:64109750-64109769 MS.gene045658:CDS 50.0%
TTGGATTTCATCCGCTACGC+TGG - chr4.3:64105980-64105999 None:intergenic 50.0%
! GGGGCTTCTAAAGAAGGCTA+AGG + chr4.3:64105679-64105698 MS.gene045658:CDS 50.0%
! CCTTCTTTAGAAGCCCCGCT+CGG - chr4.3:64105676-64105695 None:intergenic 55.0%
! GTACCGGAGACCCTTTTGCA+GGG - chr4.3:64108769-64108788 None:intergenic 55.0%
!! ACTTTCTGTAAGCGCCGAGC+GGG + chr4.3:64105659-64105678 MS.gene045658:CDS 55.0%
!! GACTTTCTGTAAGCGCCGAG+CGG + chr4.3:64105658-64105677 MS.gene045658:CDS 55.0%
CTCGCGGGAAGGTTCAGCTA+AGG + chr4.3:64105606-64105625 MS.gene045658:CDS 60.0%
! CCGAGCGGGGCTTCTAAAGA+AGG + chr4.3:64105673-64105692 MS.gene045658:CDS 60.0%
! CGTACCGGAGACCCTTTTGC+AGG - chr4.3:64108770-64108789 None:intergenic 60.0%
!! CTTTCTGTAAGCGCCGAGCG+GGG + chr4.3:64105660-64105679 MS.gene045658:CDS 60.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 64105602 64110138 64105602 ID=MS.gene045658
chr4.3 mRNA 64105602 64110138 64105602 ID=MS.gene045658.t1;Parent=MS.gene045658
chr4.3 exon 64105602 64105783 64105602 ID=MS.gene045658.t1.exon1;Parent=MS.gene045658.t1
chr4.3 CDS 64105602 64105783 64105602 ID=cds.MS.gene045658.t1;Parent=MS.gene045658.t1
chr4.3 exon 64106229 64106316 64106229 ID=MS.gene045658.t1.exon2;Parent=MS.gene045658.t1
chr4.3 CDS 64106229 64106316 64106229 ID=cds.MS.gene045658.t1;Parent=MS.gene045658.t1
chr4.3 exon 64108723 64108784 64108723 ID=MS.gene045658.t1.exon3;Parent=MS.gene045658.t1
chr4.3 CDS 64108723 64108784 64108723 ID=cds.MS.gene045658.t1;Parent=MS.gene045658.t1
chr4.3 exon 64109741 64109840 64109741 ID=MS.gene045658.t1.exon4;Parent=MS.gene045658.t1
chr4.3 CDS 64109741 64109840 64109741 ID=cds.MS.gene045658.t1;Parent=MS.gene045658.t1
chr4.3 exon 64109976 64110017 64109976 ID=MS.gene045658.t1.exon5;Parent=MS.gene045658.t1
chr4.3 CDS 64109976 64110017 64109976 ID=cds.MS.gene045658.t1;Parent=MS.gene045658.t1
chr4.3 exon 64110124 64110138 64110124 ID=MS.gene045658.t1.exon6;Parent=MS.gene045658.t1
chr4.3 CDS 64110124 64110138 64110124 ID=cds.MS.gene045658.t1;Parent=MS.gene045658.t1
Gene Sequence

>MS.gene045658

ATGGCTCGCGGGAAGGTTCAGCTAAGGAGAATTGAGAACCCAGTGCACAGGCAAGTGACTTTCTGTAAGCGCCGAGCGGGGCTTCTAAAGAAGGCTAAGGAGCTCTCTGTGCTTTGCGATGCTGAAATTGGTCTTGTCATTTTCTCCGCTCATGGAAAGCTCTATGAACTCGCCACCAAAGGGTATGTCTCTTTTTTCGATCAATAATACACTCAAAGAAAAATGTTCCGATCATTTGCATAACCCTAAACGATGTAGTGTGTGTAACCGTGCACCGCAAAACTTTGCAATATATAGGATTCAAAATTGTTTGAATTATGTGCAACACTATACATGATTTGTATACATCCGTACATTGCTTAACTTTACATATAACCAGCGTAGCGGATGAAATCCAAACAAATATGTTTGGATTTCCTATAACACTATGTATGATGCACTATGTGCACTGTAGAGCTTTAGAGTGCATATAGTGCAGACTTCAGAGGATCTATAGTGGATCTCTGTAACCCGTACTCAATGCATTTAGAGCTCTACATTGTAGGGATCTATAGCCCATCAAGTTTATTTTGGTCACTGAAGTTTGACTTGTCAAGTTCATTGTTTTTGTTTATACATGAAATGAAGAACCATGCAAGGGCTAATAGAGAAGTACTTGAAGTTCACACGAGGGACTCAACCTGAAGCTGTAACTGAAGCACGTCCTCTTGTATTGGTATGTCTCTAGCAAACTATATGCTAAACGATATTATAATATAAATGCTAGATGTAGAAGCAAAATGGAAAAAATGTATATGCTTACTATATTATATATGCAAATTAAAAGAGTAGTGATAGTGGTATTGGATGCTCTAATTGGTGCATTATCATCACTGAATAATATAATAATATAGTGATAGTGTTGATATATATATATACCCGGTCAAATATAGAAATCAAGGTATGTTTTGTTCTCTTTTTGTCTTGTTTTGACACATGTAGGACTTGATTCTATGAGATAAAGTATGTCGGGTTTTGACACATGTAGGAGATCATATTAACGTCACATCTTTTGCAATAGTAACTCATATAATATCAATTAATTCCACTGCTTTGTTGTTAACCTTGTGCTTAATGCTTAGACAACTTGATATTAATAAATTCATTTTGCTTATTCAAAAGACAATGTTTTGGGTTGGAGTATCTATTTTATTTTTATTGACAAATTTTTTAGATAAGCGAGATAGTTTATAAGTAATTAAAGAGTACAAGAGATACTCTAATCTATTTTACAAAACAACAAATGGATTTAAGAGCTAATCAGAAAATATCCCTTATTCCTACCCTCTTCACAATATCCCTTATTGATATATTTTTACTTCATCCGTTTATTTTTAAATGTCGTTTGACTATATTATTTTTTTAATTTATTTAACTTTCCTTTTGATAATTTAAGCGTGCAATTTTTTAATTATACCCTTTCCTATTACTCAAACAATTTTTTTTTTGGTACATGCAAATATAAACTTTCATGAAACTAAATCCGGTTCTATATAATAGTGGTTTCATGATATGATAAAGAAAAACTCCAAAAATGCACTTCATTAGCGGAGAGTACTATTCTAAAACGAAACTTAAAAAAACCGAAAAGAGTATTATTATTTTTTAAAAAAATTCTTTGATACCGAAAGCTTGTTGTATAAATGAATTCAAAATTTAAATTTAATTTAAAAGAATTTAATATATATATATATATATATATATATATATATATATATAATTATGTCCACAATTATTTATAATATGTTCTTAATATATATGACATCAAATGATAGGATATTGTATTCAGCGAAACTCAAAAGTAATGACACCTTAATCAAGGTAGCAAATTATGAAATGCTTACAGTTTTAAGTAAAAGAGGAGTGTTATGAACATCCTTTTTCTAACATCTTCTCTAACATTTACTCTCTTATTGTGTGAAATTCATGTGGATATCATCCTCTAAAAATGGATCGTATATAGAGTGGTGAGACCCACGTGAGTTTCATCTAACAGAAGAATGAGTGTTAGAGAGTGTGCTAGAAAGAGTGTGTTCCTGACATTTTTTTATTTAAAAAAATCAGGACGAGGGAATGACACTTAAATTAAGGTAGCAAATACTTAAGAATGAAAATTCATTTACTTCTGTTGGAGAGACTAGAAGACTCAAACGTGCAACATGTGAAATCTAAAACCTCTTATACTTCACTAGGCCAACTCTTCTAAGTTACATACAATAGTAGTATCTATTTATGAAAGAATGATTTGTCAATTAATACTACAGAATCAATTAAAATAATTCTTTTGAAGTATTACTGCTAGAACAAAAAAAAAAAAATGGAAATTGCGGTACATATGCACATTGTTACATTTTTCATGTATGATTTTAAATTGTTGTTGCGGTTGCCCATGTTTATTTTTTGCAACCGCAAAATTTTATTGAAACACTTGTGCTAGAACAGAAGATAGGCCCCGTAACAAGCCCTAGATTTTCTTGTAACACACATTGCGACTTAAAATAATTTAAATTTTTTACAAATTATTATATAAAGTGGCAACACCGTGCTACCATAAAATTTACTGACCATACTAGAGTGCAAATTTTCTCTATAAATCATTGTTGAAAGATGCTTAAAATACACCGTTGAGAGATTGCTAAAAGTAAGAATTTTCATTAGATCGAAAGGAGATTGAGATTGGTGGTTCTGAAAATTTCAATTTTGGTGAGATGATTTGAACTAACGTGACTAAATTTGTCTAATGCGGTCCTAATGCACTAACAATGCTATCGTACACGTGATTGAAGATCAAATTGCAATTGCAGTGTGATTGCAGTGGCTACCGCAGTTTGAAAGAATGATTTACATGTCAATTTTTTGTCGTTGTATACATGTACTTGATGTTTAGTATACACAATAATGCTAGAAAACTATTCACATAAAGCACGTTCAAGAAAAAGAAGTGTAAATTGAACAACTCACACATGCAATTAACATGTTTTAATGTCAATATACTATTTACGATTTATACTGTTATCTGATGATATTATTTTTGGCACAATATCTATTCTACTAAGTTTGTTTTTTGCATGTTCATATCTAGGATGCTAAAGAGGAAACCAATGTGCTCAAGCAAGAGATCGATACCCTGCAAAAGGGTCTCCGGTACGTACATTTGACTCTCGAGAAAACATAAACCAAAATATTGAAAAGTCATCAATAATGTTGTCATTACAAGAATAACATGCCTAATTTAAATTTGGCTAAAATATGGTTTTAGTCCCTGCAAATATGCCTCGTTTTGGTTTTAGTCCTTGTAAAAAAAAAAATTTGTTTTTGGTCCCTGCAAAATTTTTTGTTTTTTAAAATAGTCTCTGACCCCATTTTTGTCATGATTTGCATACGCGGCACATGATGACTGAACCCATTTTGTAGTTTTTGGTCCCTGCAAAATATTTTGTTTTTTTAAAAAGGTGTCTGCAAAATTTTTTGTTTTTGAAAATAGTCCCTCCAGGGACTTTTTACAAAAACAAAAAATTTTGCAGGGACCAAAAACAATTTTTTTTTACAGGGACTAAAACCAAAACGAGGCATATTTGCAGGGACTAAAACCATATTTTAGCCTTTAAATTTCTCCATCCATTTAATTTGAATCAATTTTTTTTTCATCCATTAAAGAGTTTAAATGTTTCATAGTGCATGTTGTTTATATATACTAGCAGAAACACAAAGACTAACGTTTTCATCTGTCTGTTTTCTTATTGCGCTTGATTGTATATCTATTTTATTACATCGCGCTTGATTGTATATCTATTTTATTACATTAGATTATTATTTCTTTGGCAAATAAGATCAATTAAAACTCTTTTTTTGTTTTGTTTCCAATGTCGTTGTTCCCATTGTATTGAATCATTCATATTATAATGAAAAGTAACTGATTTTTTTTTCTAGTAAAAGAATTTAATTAATATTATAAAATGGATAATATTGTAAATAAAATAGTTTAAATTATTGCTATAATGAAAACTATGTACTTTTACAAATAACTATATTAATGAAAGCATAAATATACTTTCTTTGTAAGCCAAAGAATTAAGAAAATTAAACGGCATTATTGGCAGGTATTTGTTTGGAGGAGGATTAGGGACTATGGCAATGGATGAGTTGCAAGTTCTTGAAAAGAACCTCGAAAACTGGATGTATAATGTTCGCTCAATGAAGGTATCAACCAACAAACTTTTTTCTCTCTCTTAATTAGTGGGTTTAATATCTTTTGTACTAATTTTAATTTGAGTAAAATTATGTTTTGCTGTTTAAAAAAAAGAGATTTAATGTGCCTTATACTTTGAACTACAGATGAACATTATGTCACAAGAAATCCAAACTTTGAGGGATAAGGTTAGCATAAACTTATTCAGCTTTTATTTATTTAGCTATTACTTCTTTACATATGAACTCTAGTGTATAAAAATTATATGATAATAGTGTTACAAATATAATATAGAAAAAAATAGCTTAA
Protein sequence

>MS.gene045658.t1

MARGKVQLRRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGLVIFSAHGKLYELATKGTMQGLIEKYLKFTRGTQPEAVTEARPLVLDAKEETNVLKQEIDTLQKGLRYLFGGGLGTMAMDELQVLEKNLENWMYNVRSMKMNIMSQEIQTLRDKKKIA