AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene045703

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene045703.t1 MTR_4g035590 98.588 354 4 1 1 353 1 354 0.0 732
MS.gene045703.t1 MTR_2g062730 79.739 153 29 2 8 158 10 162 2.83e-88 269
MS.gene045703.t1 MTR_8g024480 73.494 166 32 1 8 161 15 180 1.96e-87 270
MS.gene045703.t1 MTR_5g021710 72.956 159 42 1 1 158 1 159 1.92e-84 259
MS.gene045703.t1 MTR_4g036030 43.807 331 147 9 8 324 7 312 4.69e-81 251
MS.gene045703.t1 MTR_8g076110 66.102 177 57 2 8 181 6 182 9.98e-81 249
MS.gene045703.t1 MTR_4g101680 75.497 151 36 1 8 157 7 157 1.64e-80 250
MS.gene045703.t1 MTR_5g012080 45.541 314 138 7 8 317 7 291 2.23e-78 244
MS.gene045703.t1 MTR_1g096430 58.883 197 73 4 8 196 7 203 6.58e-74 232
MS.gene045703.t1 MTR_6g477900 57.051 156 63 2 7 159 5 159 9.01e-60 192
MS.gene045703.t1 MTR_2g078700 58.385 161 57 3 5 158 20 177 6.67e-59 195
MS.gene045703.t1 MTR_3g435150 61.688 154 51 3 8 156 16 166 1.22e-58 192
MS.gene045703.t1 MTR_2g064090 55.556 153 63 2 8 156 6 157 1.47e-58 193
MS.gene045703.t1 MTR_6g084430 60.000 150 56 2 8 156 5 151 1.76e-58 192
MS.gene045703.t1 MTR_4g108760 57.143 168 58 3 8 170 17 175 3.22e-58 192
MS.gene045703.t1 MTR_3g109340 57.895 152 58 3 8 156 22 170 4.95e-57 189
MS.gene045703.t1 MTR_5g076850 51.124 178 76 5 7 176 5 179 5.19e-57 196
MS.gene045703.t1 MTR_1g008740 59.740 154 54 4 8 156 13 163 9.58e-57 188
MS.gene045703.t1 MTR_1g008740 59.740 154 54 4 8 156 27 177 1.60e-56 188
MS.gene045703.t1 MTR_3g070030 59.119 159 56 3 9 161 20 175 4.79e-56 186
MS.gene045703.t1 MTR_4g081870 41.877 277 134 10 2 264 3 266 5.37e-56 184
MS.gene045703.t1 MTR_3g064580 49.198 187 86 5 7 187 5 188 7.86e-56 193
MS.gene045703.t1 MTR_7g085260 60.127 158 51 4 8 156 17 171 1.08e-55 186
MS.gene045703.t1 MTR_3g109340 56.209 153 60 3 8 156 22 171 1.46e-55 186
MS.gene045703.t1 MTR_6g012670 57.233 159 60 2 8 161 20 175 1.84e-55 184
MS.gene045703.t1 MTR_7g085220 47.027 185 79 3 1 169 1 182 9.84e-55 183
MS.gene045703.t1 MTR_5g041940 54.037 161 64 2 8 161 3 160 1.12e-54 180
MS.gene045703.t1 MTR_2g079990 55.263 152 62 2 8 156 16 164 3.46e-54 182
MS.gene045703.t1 MTR_1g069805 54.902 153 63 3 6 156 8 156 1.10e-53 178
MS.gene045703.t1 MTR_2g080010 40.800 250 105 7 8 219 15 259 2.84e-53 179
MS.gene045703.t1 MTR_2g064470 40.400 250 125 7 1 244 4 235 3.86e-53 177
MS.gene045703.t1 MTR_7g011130 51.031 194 68 5 11 181 22 211 5.62e-53 179
MS.gene045703.t1 MTR_6g032770 54.375 160 61 5 8 159 18 173 1.15e-52 179
MS.gene045703.t1 MTR_3g116070 49.754 203 85 8 7 200 22 216 1.44e-52 177
MS.gene045703.t1 MTR_7g097090 54.967 151 62 3 6 154 8 154 2.14e-52 175
MS.gene045703.t1 MTR_8g059170 53.896 154 63 2 8 156 14 164 4.31e-52 176
MS.gene045703.t1 MTR_7g005280 56.494 154 56 4 8 157 15 161 6.64e-52 173
MS.gene045703.t1 MTR_5g014300 39.600 250 140 4 6 248 4 249 1.27e-51 174
MS.gene045703.t1 MTR_2157s0010 48.538 171 70 3 1 156 1 168 4.69e-51 171
MS.gene045703.t1 MTR_3g088110 51.553 161 68 3 3 157 2 158 7.05e-51 171
MS.gene045703.t1 MTR_7g011120 55.901 161 56 3 10 158 10 167 9.66e-51 171
MS.gene045703.t1 MTR_3g096920 52.564 156 64 3 8 157 7 158 1.83e-50 170
MS.gene045703.t1 MTR_6g011860 50.617 162 64 4 10 158 17 175 2.18e-49 170
MS.gene045703.t1 MTR_8g467490 45.503 189 81 5 10 183 16 197 3.34e-49 170
MS.gene045703.t1 MTR_8g094580 50.318 157 67 3 8 157 7 159 1.07e-48 166
MS.gene045703.t1 MTR_1g090720 52.201 159 66 3 10 159 44 201 1.18e-48 171
MS.gene045703.t1 MTR_5g040420 49.390 164 67 3 8 158 14 174 1.33e-48 168
MS.gene045703.t1 MTR_4g089135 46.927 179 64 5 8 158 15 190 1.78e-48 167
MS.gene045703.t1 MTR_3g096140 50.331 151 71 2 10 157 9 158 2.33e-48 164
MS.gene045703.t1 MTR_2g079990 46.667 180 62 3 8 156 16 192 2.35e-48 167
MS.gene045703.t1 MTR_4g098630 51.572 159 66 4 6 156 4 159 2.44e-48 166
MS.gene045703.t1 MTR_5g069030 53.548 155 66 3 8 158 25 177 3.81e-48 172
MS.gene045703.t1 MTR_7g100990 50.633 158 66 3 8 156 11 165 9.37e-48 164
MS.gene045703.t1 MTR_3g096140 50.331 151 71 2 10 157 9 158 1.71e-47 164
MS.gene045703.t1 MTR_2g093810 50.000 164 70 3 2 156 8 168 3.08e-47 163
MS.gene045703.t1 MTR_3g093040 50.323 155 71 4 8 158 108 260 4.13e-47 162
MS.gene045703.t1 MTR_8g063550 50.000 154 67 3 10 157 8 157 1.08e-46 162
MS.gene045703.t1 MTR_3g093050 50.968 155 70 3 8 158 22 174 2.12e-46 166
MS.gene045703.t1 MTR_3g093050 50.314 159 73 3 4 158 18 174 2.82e-46 166
MS.gene045703.t1 MTR_8g063550 50.000 154 67 3 10 157 8 157 4.58e-46 163
MS.gene045703.t1 MTR_8g063550 50.000 154 67 3 10 157 8 157 5.91e-46 162
MS.gene045703.t1 MTR_3g096920 57.252 131 52 2 8 138 7 133 8.26e-46 159
MS.gene045703.t1 MTR_0036s0150 50.000 150 71 3 10 156 7 155 1.22e-45 163
MS.gene045703.t1 MTR_2g086880 45.856 181 89 4 1 181 11 182 2.53e-45 162
MS.gene045703.t1 MTR_2g086880 45.856 181 89 4 1 181 11 182 2.89e-45 163
MS.gene045703.t1 MTR_3g070040 51.497 167 64 4 12 170 12 169 3.02e-45 158
MS.gene045703.t1 MTR_1g090723 49.007 151 72 3 10 156 10 159 6.77e-45 163
MS.gene045703.t1 MTR_8g093580 49.351 154 68 3 10 157 8 157 1.06e-44 160
MS.gene045703.t1 MTR_1g090723 49.333 150 72 3 10 156 10 158 1.28e-44 161
MS.gene045703.t1 MTR_1g097300 49.333 150 72 2 10 156 21 169 1.39e-44 161
MS.gene045703.t1 MTR_1g090723 49.007 151 73 3 10 157 10 159 1.58e-44 162
MS.gene045703.t1 MTR_4g134460 46.753 154 77 3 8 159 54 204 3.43e-44 157
MS.gene045703.t1 MTR_5g090970 34.091 264 126 7 8 228 18 276 5.25e-43 151
MS.gene045703.t1 MTR_4g075980 46.471 170 83 4 10 176 17 181 8.43e-43 150
MS.gene045703.t1 MTR_5g090970 33.712 264 126 7 8 228 18 275 1.40e-41 147
MS.gene045703.t1 MTR_2g068880 34.137 249 131 8 8 227 21 265 4.71e-40 144
MS.gene045703.t1 MTR_2g068920 36.283 226 107 8 8 204 20 237 1.61e-39 142
MS.gene045703.t1 MTR_8g099750 44.134 179 82 6 8 176 14 184 5.70e-39 138
MS.gene045703.t1 MTR_3g096140 47.445 137 68 2 24 157 2 137 2.83e-38 139
MS.gene045703.t1 MTR_3g098810 42.945 163 75 4 8 157 14 171 4.71e-36 131
MS.gene045703.t1 MTR_8g023840 47.368 152 73 5 5 153 8 155 3.17e-35 133
MS.gene045703.t1 MTR_3g098810 45.865 133 63 2 8 136 14 141 6.11e-33 121
MS.gene045703.t1 MTR_2g086690 41.071 168 83 6 6 160 2 166 2.24e-32 122
MS.gene045703.t1 MTR_8g023860 46.711 152 68 6 8 153 12 156 4.39e-32 124
MS.gene045703.t1 MTR_8g023900 43.590 156 81 5 8 159 12 164 1.89e-30 121
MS.gene045703.t1 MTR_8g023900 45.395 152 70 6 11 156 196 340 1.09e-28 116
MS.gene045703.t1 MTR_4g052620 38.788 165 86 5 9 161 6 167 5.05e-30 115
MS.gene045703.t1 MTR_8g094580 53.465 101 39 2 64 157 6 105 5.57e-30 115
MS.gene045703.t1 MTR_8g023930 38.542 192 104 6 8 196 24 204 9.29e-30 119
MS.gene045703.t1 MTR_4g094302 36.875 160 79 4 8 156 11 159 2.43e-28 109
MS.gene045703.t1 MTR_4g094302 40.458 131 65 3 8 136 11 130 6.91e-27 104
MS.gene045703.t1 MTR_8g023880 35.354 198 103 7 4 184 3 192 3.55e-25 103
MS.gene045703.t1 MTR_7g105170 34.940 166 96 4 8 161 4 169 1.06e-24 101
MS.gene045703.t1 MTR_7g070140 58.667 75 29 1 64 136 17 91 2.17e-24 97.4
MS.gene045703.t1 MTR_8g093790 35.593 177 92 7 2 178 4 158 7.73e-24 97.1
MS.gene045703.t1 MTR_3g096400 31.953 169 90 6 8 160 7 166 9.05e-18 81.3
MS.gene045703.t1 MTR_7g070150 59.259 54 20 2 104 156 5 57 1.51e-16 74.3
MS.gene045703.t1 MTR_7g083360 31.013 158 102 6 1 155 1 154 1.07e-14 71.2
MS.gene045703.t1 MTR_7g083330 31.884 138 87 6 1 136 11 143 8.48e-12 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene045703.t1 AT4G10350 59.840 376 89 13 2 352 3 341 1.02e-142 408
MS.gene045703.t1 AT1G33280 56.111 360 90 11 1 349 1 303 5.60e-126 364
MS.gene045703.t1 AT4G10350 54.769 325 85 13 53 352 7 294 5.26e-103 305
MS.gene045703.t1 AT1G79580 79.355 155 31 1 8 161 17 171 8.41e-89 271
MS.gene045703.t1 AT1G79580 79.355 155 31 1 8 161 17 171 8.41e-89 271
MS.gene045703.t1 AT1G79580 79.355 155 31 1 8 161 17 171 8.41e-89 271
MS.gene045703.t1 AT1G79580 79.355 155 31 1 8 161 17 171 8.41e-89 271
MS.gene045703.t1 AT1G79580 79.355 155 31 1 8 161 17 171 8.41e-89 271
MS.gene045703.t1 AT1G32770 73.810 168 31 2 8 162 16 183 2.27e-87 268
MS.gene045703.t1 AT2G46770 68.824 170 37 1 8 161 16 185 2.09e-84 260
MS.gene045703.t1 AT4G36160 76.159 151 35 1 8 157 14 164 1.82e-82 256
MS.gene045703.t1 AT4G36160 76.159 151 35 1 8 157 10 160 1.82e-82 256
MS.gene045703.t1 AT4G36160 76.159 151 35 1 8 157 10 160 1.82e-82 256
MS.gene045703.t1 AT2G18060 73.684 152 39 1 7 157 8 159 1.48e-81 253
MS.gene045703.t1 AT2G18060 73.684 152 39 1 7 157 8 159 1.48e-81 253
MS.gene045703.t1 AT1G12260 57.021 235 85 7 8 226 7 241 8.61e-81 250
MS.gene045703.t1 AT3G61910 67.647 170 39 2 8 161 11 180 1.81e-80 249
MS.gene045703.t1 AT1G12260 57.082 233 84 7 8 224 7 239 2.17e-79 248
MS.gene045703.t1 AT1G62700 52.713 258 88 7 8 237 7 258 1.56e-78 246
MS.gene045703.t1 AT1G62700 52.713 258 88 7 8 237 7 258 1.56e-78 246
MS.gene045703.t1 AT5G66300 70.130 154 44 2 7 158 11 164 5.62e-77 239
MS.gene045703.t1 AT5G62380 70.199 151 44 1 8 157 7 157 8.98e-76 238
MS.gene045703.t1 AT5G62380 70.199 151 44 1 8 157 7 157 8.98e-76 238
MS.gene045703.t1 AT1G71930 67.105 152 49 1 6 156 7 158 1.92e-74 233
MS.gene045703.t1 AT1G71930 67.105 152 49 1 6 156 7 158 1.92e-74 233
MS.gene045703.t1 AT3G18400 60.256 156 57 2 8 161 5 157 2.53e-62 202
MS.gene045703.t1 AT3G17730 58.333 156 61 3 7 159 5 159 1.02e-61 198
MS.gene045703.t1 AT2G24430 60.377 159 56 3 7 161 15 170 1.07e-61 200
MS.gene045703.t1 AT2G24430 60.377 159 56 3 7 161 15 170 1.07e-61 200
MS.gene045703.t1 AT5G07680 44.765 277 122 9 8 269 3 263 1.07e-61 200
MS.gene045703.t1 AT5G61430 43.972 282 122 10 8 269 16 281 1.75e-61 200
MS.gene045703.t1 AT5G07680 44.765 277 122 9 8 269 17 277 1.83e-61 200
MS.gene045703.t1 AT5G39610 54.255 188 70 5 8 188 20 198 8.78e-59 192
MS.gene045703.t1 AT3G15170 57.500 160 56 4 8 159 20 175 1.22e-56 187
MS.gene045703.t1 AT5G17260 57.143 154 61 3 7 156 5 157 3.31e-56 190
MS.gene045703.t1 AT1G54330 57.237 152 60 2 7 156 5 153 6.86e-56 185
MS.gene045703.t1 AT5G18270 58.599 157 56 4 8 158 21 174 9.83e-56 185
MS.gene045703.t1 AT1G76420 53.977 176 71 4 7 178 21 190 1.11e-55 185
MS.gene045703.t1 AT3G29035 59.868 152 53 2 8 154 24 172 1.53e-55 184
MS.gene045703.t1 AT5G18270 57.962 157 57 4 8 158 21 174 1.81e-55 184
MS.gene045703.t1 AT1G65910 55.484 155 65 2 8 159 6 159 1.85e-55 191
MS.gene045703.t1 AT5G53950 56.098 164 62 3 8 164 17 177 1.94e-55 186
MS.gene045703.t1 AT3G03200 57.143 154 61 3 7 156 5 157 3.80e-55 187
MS.gene045703.t1 AT1G69490 50.000 170 75 2 3 165 4 170 7.93e-55 181
MS.gene045703.t1 AT3G04060 59.615 156 52 5 8 156 20 171 4.17e-54 181
MS.gene045703.t1 AT3G10480 53.704 162 70 2 2 159 21 181 2.58e-53 182
MS.gene045703.t1 AT3G04070 50.000 166 65 3 6 156 8 170 6.10e-53 178
MS.gene045703.t1 AT3G10480 54.037 161 70 2 2 159 21 180 7.00e-53 181
MS.gene045703.t1 AT4G27410 52.597 154 67 2 8 158 14 164 8.91e-53 176
MS.gene045703.t1 AT3G10490 52.469 162 72 2 2 159 21 181 1.03e-52 174
MS.gene045703.t1 AT3G12977 37.329 292 148 10 1 287 11 272 1.18e-52 176
MS.gene045703.t1 AT3G15500 52.288 153 67 2 8 157 14 163 5.55e-52 175
MS.gene045703.t1 AT3G10490 52.469 162 72 2 2 159 21 181 1.66e-51 177
MS.gene045703.t1 AT1G61110 51.515 165 61 3 8 156 16 177 2.62e-51 173
MS.gene045703.t1 AT5G04410 53.947 152 66 2 8 156 9 159 2.72e-51 179
MS.gene045703.t1 AT1G52890 51.948 154 68 2 8 158 14 164 4.02e-51 173
MS.gene045703.t1 AT3G10500 54.605 152 65 3 8 156 9 159 8.47e-51 177
MS.gene045703.t1 AT1G56010 49.693 163 72 3 1 156 12 171 3.92e-50 170
MS.gene045703.t1 AT5G63790 52.532 158 63 4 8 157 60 213 5.12e-50 170
MS.gene045703.t1 AT3G04070 45.604 182 65 3 6 156 8 186 5.19e-50 171
MS.gene045703.t1 AT5G63790 52.532 158 63 4 8 157 50 203 5.38e-50 170
MS.gene045703.t1 AT1G77450 48.795 166 75 3 2 161 4 165 5.58e-50 168
MS.gene045703.t1 AT1G01720 50.955 157 66 3 8 157 7 159 7.92e-50 169
MS.gene045703.t1 AT4G27410 48.810 168 69 4 8 158 14 181 4.27e-49 167
MS.gene045703.t1 AT5G08790 51.899 158 64 4 8 157 7 160 8.41e-49 166
MS.gene045703.t1 AT3G10480 45.361 194 70 2 2 159 21 214 1.17e-48 171
MS.gene045703.t1 AT5G24590 50.000 166 78 3 4 165 9 173 1.83e-48 169
MS.gene045703.t1 AT4G28530 50.595 168 59 5 8 156 10 172 3.97e-48 166
MS.gene045703.t1 AT5G46590 50.955 157 71 3 8 159 6 161 5.34e-48 164
MS.gene045703.t1 AT3G15510 41.667 216 101 5 12 210 21 228 6.26e-48 166
MS.gene045703.t1 AT4G17980 50.641 156 69 3 8 156 6 160 1.14e-47 162
MS.gene045703.t1 AT1G33060 51.299 154 69 3 7 156 23 174 1.34e-47 171
MS.gene045703.t1 AT2G33480 51.656 151 66 2 8 157 15 159 1.38e-47 162
MS.gene045703.t1 AT1G33060 51.299 154 69 3 7 156 23 174 1.40e-47 171
MS.gene045703.t1 AT4G17980 50.641 156 69 3 8 156 6 160 3.43e-47 162
MS.gene045703.t1 AT4G35580 51.634 153 68 3 8 156 9 159 3.45e-47 167
MS.gene045703.t1 AT4G35580 51.634 153 68 3 8 156 9 159 3.66e-47 167
MS.gene045703.t1 AT4G35580 51.634 153 68 3 8 156 9 159 3.72e-47 167
MS.gene045703.t1 AT5G39820 44.944 178 67 4 8 158 20 193 4.51e-47 163
MS.gene045703.t1 AT1G26870 37.050 278 138 8 10 267 18 278 7.83e-47 164
MS.gene045703.t1 AT2G33480 50.327 153 67 2 8 157 15 161 1.05e-46 160
MS.gene045703.t1 AT5G46590 55.970 134 57 2 8 140 6 138 1.12e-46 160
MS.gene045703.t1 AT3G49530 45.810 179 92 4 4 178 9 186 2.59e-46 162
MS.gene045703.t1 AT3G49530 45.810 179 92 4 4 178 9 186 5.83e-46 163
MS.gene045703.t1 AT2G27300 39.303 201 112 4 1 201 7 197 1.14e-45 159
MS.gene045703.t1 AT5G13180 50.000 156 64 4 8 157 14 161 4.30e-45 155
MS.gene045703.t1 AT5G64060 47.097 155 78 2 8 159 6 159 2.70e-44 156
MS.gene045703.t1 AT2G02450 47.682 151 74 3 8 156 51 198 2.98e-44 156
MS.gene045703.t1 AT2G02450 47.682 151 74 3 8 156 51 198 4.50e-44 157
MS.gene045703.t1 AT2G43000 46.358 151 74 3 10 156 20 167 1.17e-43 152
MS.gene045703.t1 AT1G52880 50.307 163 61 4 12 158 21 179 1.68e-43 153
MS.gene045703.t1 AT1G32510 42.347 196 98 5 8 190 6 199 1.07e-42 150
MS.gene045703.t1 AT1G34190 44.667 150 79 2 10 156 18 166 5.50e-42 154
MS.gene045703.t1 AT2G17040 40.625 192 103 5 10 195 8 194 3.67e-41 145
MS.gene045703.t1 AT1G34180 43.333 150 81 2 10 156 18 166 4.09e-41 150
MS.gene045703.t1 AT1G34180 43.333 150 81 2 10 156 18 166 1.12e-40 150
MS.gene045703.t1 AT5G22290 45.333 150 77 2 8 157 21 165 1.26e-40 146
MS.gene045703.t1 AT5G09330 47.368 152 72 3 10 156 8 156 1.27e-40 149
MS.gene045703.t1 AT5G09330 47.368 152 72 3 10 156 8 156 1.27e-40 149
MS.gene045703.t1 AT5G09330 47.368 152 72 3 10 156 8 156 1.27e-40 149
MS.gene045703.t1 AT5G09330 47.368 152 72 3 10 156 8 156 1.27e-40 149
MS.gene045703.t1 AT5G09330 47.368 152 72 3 10 156 8 156 1.27e-40 149
MS.gene045703.t1 AT1G34180 40.994 161 81 3 10 156 18 178 6.00e-40 147
MS.gene045703.t1 AT3G44290 41.566 166 85 4 10 175 16 169 7.97e-40 140
MS.gene045703.t1 AT5G61430 40.708 226 101 9 64 269 6 218 1.81e-39 141
MS.gene045703.t1 AT1G34180 40.994 161 81 3 10 156 18 178 1.95e-39 147
MS.gene045703.t1 AT3G44290 41.566 166 85 4 10 175 16 169 6.13e-39 141
MS.gene045703.t1 AT1G32870 46.626 163 75 4 1 156 3 160 3.11e-38 143
MS.gene045703.t1 AT1G32870 46.626 163 75 4 1 156 3 160 3.20e-38 143
MS.gene045703.t1 AT1G32870 46.626 163 75 4 1 156 39 196 5.46e-38 143
MS.gene045703.t1 AT5G04395 43.275 171 79 4 2 159 22 187 7.08e-38 134
MS.gene045703.t1 AT3G12910 43.713 167 70 5 10 156 23 185 3.13e-37 136
MS.gene045703.t1 AT1G56010 58.763 97 34 1 66 156 8 104 5.36e-35 129
MS.gene045703.t1 AT3G12977 54.630 108 42 3 53 156 10 114 1.39e-34 127
MS.gene045703.t1 AT2G18060 74.286 70 17 1 89 157 2 71 5.93e-30 116
MS.gene045703.t1 AT2G33480 50.000 102 48 1 59 157 3 104 4.49e-28 109
MS.gene045703.t1 AT1G02230 39.196 199 98 8 9 193 4 193 1.52e-26 108
MS.gene045703.t1 AT4G01550 36.158 177 104 5 11 183 7 178 4.52e-26 108
MS.gene045703.t1 AT4G01520 37.654 162 93 5 9 165 5 163 7.20e-26 105
MS.gene045703.t1 AT4G01540 38.125 160 91 5 11 165 7 163 1.12e-24 103
MS.gene045703.t1 AT4G01540 38.125 160 91 5 11 165 7 163 1.31e-24 104
MS.gene045703.t1 AT4G01540 38.125 160 91 5 11 165 7 163 1.82e-24 103
MS.gene045703.t1 AT4G01540 38.125 160 91 5 11 165 7 163 2.13e-24 103
MS.gene045703.t1 AT4G28530 36.145 166 49 5 8 156 10 135 2.14e-24 102
MS.gene045703.t1 AT5G64530 36.310 168 73 6 8 156 3 155 3.28e-24 98.2
MS.gene045703.t1 AT5G64530 41.353 133 61 5 8 138 3 120 1.03e-23 96.3
MS.gene045703.t1 AT1G02250 34.762 210 120 11 9 210 4 204 8.13e-23 98.2
MS.gene045703.t1 AT3G10490 53.750 80 33 1 84 159 2 81 2.48e-22 96.7
MS.gene045703.t1 AT3G10490 53.750 80 33 1 84 159 2 81 2.48e-22 96.7
MS.gene045703.t1 AT3G04420 36.025 161 88 5 9 162 4 156 6.00e-22 94.7
MS.gene045703.t1 AT3G04420 36.025 161 88 5 9 162 4 156 8.43e-22 95.1
MS.gene045703.t1 AT5G22380 35.897 156 91 4 8 154 5 160 8.58e-22 93.2
MS.gene045703.t1 AT3G44350 33.974 156 90 5 11 156 8 160 9.77e-22 93.2
MS.gene045703.t1 AT3G44350 38.931 131 71 5 11 135 8 135 8.43e-21 88.2
MS.gene045703.t1 AT1G01010 34.641 153 85 6 11 153 6 153 3.84e-19 88.6
MS.gene045703.t1 AT2G43000 44.318 88 45 2 73 156 2 89 1.82e-18 82.8
MS.gene045703.t1 AT1G02220 38.519 135 65 5 8 134 3 127 3.23e-18 85.5
MS.gene045703.t1 AT5G50820 36.552 145 67 6 1 136 10 138 5.43e-18 81.6
MS.gene045703.t1 AT3G56530 29.487 156 105 3 2 154 46 199 3.22e-16 79.0
MS.gene045703.t1 AT3G55210 28.834 163 94 5 8 154 11 167 3.91e-15 75.1
MS.gene045703.t1 AT5G22290 47.059 68 33 1 90 157 2 66 4.06e-15 74.3
MS.gene045703.t1 AT5G14000 30.573 157 100 3 5 157 10 161 4.93e-15 73.6
MS.gene045703.t1 AT5G14000 32.353 136 83 3 5 136 10 140 1.04e-13 68.6
MS.gene045703.t1 AT3G04430 35.075 134 70 6 14 134 6 135 3.03e-11 62.4

Find 89 sgRNAs with CRISPR-Local

Find 203 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGGAATACTTACAAGAAAAT+TGG 0.239923 4.3:-65231858 MS.gene045703:CDS
ATAAGTTGTTTCACTATAAT+AGG 0.269347 4.3:+65230803 None:intergenic
GAGCAACAAATGCAGGGTTT+TGG 0.295401 4.3:-65231908 MS.gene045703:CDS
AGGTATCAAGTTTCAGAATC+AGG 0.313134 4.3:-65230740 MS.gene045703:CDS
TTCTAATGGCGGTGTGCCAC+CGG 0.345325 4.3:-65233612 MS.gene045703:CDS
AAGATGGATGGGTGGTATGC+AGG 0.347766 4.3:-65231141 MS.gene045703:CDS
CTTCACTCCCAATCTTGAAT+AGG 0.355765 4.3:+65231101 None:intergenic
TTGTGAACCACCTCAAGAAA+TGG 0.360627 4.3:-65230702 MS.gene045703:CDS
TGAAAGCTGATTGATTTGAT+TGG 0.364349 4.3:+65230577 None:intergenic
CAGGAAGAGACAAGTGCATT+AGG 0.383725 4.3:-65231878 MS.gene045703:CDS
TATTAGTCCTTGACCCTGTT+GGG 0.386089 4.3:+65231931 None:intergenic
GTTGAGGCTGGGGTTGGGAG+TGG 0.389288 4.3:+65230879 None:intergenic
TAGAGGTTGAGGCTGGGGTT+GGG 0.397901 4.3:+65230874 None:intergenic
GTAGAGGTTGAGGCTGGGGT+TGG 0.413911 4.3:+65230873 None:intergenic
CTATTAGTCCTTGACCCTGT+TGG 0.415287 4.3:+65231930 None:intergenic
CTCATGGACAAAAGACTGAT+TGG 0.417162 4.3:-65231797 MS.gene045703:CDS
GCCTGTAGAGGTTGAGGCTG+GGG 0.418162 4.3:+65230869 None:intergenic
TCTAATGGCGGTGTGCCACC+GGG 0.432129 4.3:-65233611 MS.gene045703:CDS
GAAAGCTGATTGATTTGATT+GGG 0.434532 4.3:+65230578 None:intergenic
ACTAATAGAGCAACAAATGC+AGG 0.444998 4.3:-65231915 MS.gene045703:CDS
AAGGACAGAAAGTACCCAAC+AGG 0.454734 4.3:-65231945 MS.gene045703:CDS
GAGGAAATATTGTTCATTTG+TGG 0.454849 4.3:+65231055 None:intergenic
TAGAGTATGAGTTCTTCTAA+TGG 0.457341 4.3:-65233626 None:intergenic
CTTGAACAAGATGGAACCTT+GGG 0.472651 4.3:-65233489 MS.gene045703:CDS
ACCCCAGCCTCAACCTCTAC+AGG 0.478031 4.3:-65230870 MS.gene045703:CDS
AGATGGATGGGTGGTATGCA+GGG 0.480498 4.3:-65231140 MS.gene045703:CDS
TAGCCTGTAGAGGTTGAGGC+TGG 0.482716 4.3:+65230867 None:intergenic
TCAGAATCAGGCATTGAAGT+TGG 0.490637 4.3:-65230728 MS.gene045703:CDS
AGCCTGTAGAGGTTGAGGCT+GGG 0.491178 4.3:+65230868 None:intergenic
TGTGAACCACCTCAAGAAAT+GGG 0.493376 4.3:-65230701 MS.gene045703:CDS
ATGAATGGAGAATGCTTGAT+AGG 0.495506 4.3:-65230652 MS.gene045703:CDS
AATCAATCAGCTTTCATTGA+GGG 0.497186 4.3:-65230570 MS.gene045703:CDS
CATGAATACCGTCTTGAAGA+TGG 0.503674 4.3:-65231768 MS.gene045703:CDS
GAAATGTATTTGTAGGAAGA+TGG 0.506020 4.3:-65231157 MS.gene045703:intron
GCTTTCATTGAGGGGAGAGA+TGG 0.506539 4.3:-65230561 MS.gene045703:CDS
TTTCGAGCTCGAAACCGGAT+AGG 0.515112 4.3:+65230957 None:intergenic
CCTACACCCATTTCTTGAGG+TGG 0.516209 4.3:+65230695 None:intergenic
CTTCCTACACCCATTTCTTG+AGG 0.516910 4.3:+65230692 None:intergenic
AAAAGAGGCTACAAGGTTTG+AGG 0.524109 4.3:-65230609 MS.gene045703:CDS
TTGTGGATCTTGATTGTGTG+TGG 0.525676 4.3:+65231072 None:intergenic
CGAAACCGGATAGGTTCCTA+TGG 0.529928 4.3:+65230966 None:intergenic
AAGTTAGCCTGTAGAGGTTG+AGG 0.533705 4.3:+65230863 None:intergenic
GAAGGACCGTTGATTTGTTG+AGG 0.537902 4.3:+65231036 None:intergenic
AAATCAATCAGCTTTCATTG+AGG 0.543711 4.3:-65230571 MS.gene045703:CDS
CTACCACTCTCACAATCTCT+AGG 0.544505 4.3:+65230773 None:intergenic
AAAGAGATGCATACATTGGT+AGG 0.547128 4.3:+65231738 None:intergenic
ATAGGTTGTTCTGTCTGTAA+AGG 0.547458 4.3:+65230821 None:intergenic
GAATGATGACTCCACAAAAG+AGG 0.551407 4.3:-65230624 MS.gene045703:CDS
TTCAAGATTGGGAGTGAAGG+TGG 0.552771 4.3:-65231097 MS.gene045703:CDS
TTGATAATGGAGACTAAGCT+CGG 0.553649 4.3:+65230931 None:intergenic
TGTATTTGTAGGAAGATGGA+TGG 0.554275 4.3:-65231153 MS.gene045703:intron
ACTCCACAAAAGAGGCTACA+AGG 0.557185 4.3:-65230616 MS.gene045703:CDS
ATCAATCAGCTTTCATTGAG+GGG 0.560562 4.3:-65230569 MS.gene045703:CDS
GGTGTAGGAAGGAGTGGTGA+AGG 0.561219 4.3:-65230680 MS.gene045703:CDS
AACCACCATAGGAACCTATC+CGG 0.566236 4.3:-65230971 MS.gene045703:CDS
TGATATGGATGTTATAAGAG+AGG 0.567950 4.3:-65233516 MS.gene045703:CDS
CTCAAGAAATGGGTGTAGGA+AGG 0.571055 4.3:-65230691 MS.gene045703:CDS
GAAATGGGTGTAGGAAGGAG+TGG 0.573489 4.3:-65230686 MS.gene045703:CDS
GTGGTGAAGGAATGAATGAA+TGG 0.582678 4.3:-65230667 MS.gene045703:CDS
AGAGGTGGACTTGAACAAGA+TGG 0.584582 4.3:-65233498 MS.gene045703:CDS
AATCCTAGAGATTGTGAGAG+TGG 0.585606 4.3:-65230776 MS.gene045703:CDS
GATTGTGAGAGTGGTAGTGA+TGG 0.586886 4.3:-65230767 MS.gene045703:CDS
TGAAGTAACTCTTCATCGGT+CGG 0.589383 4.3:+65233575 None:intergenic
GTAATGAAGTAACTCTTCAT+CGG 0.589466 4.3:+65233571 None:intergenic
TACAAAGGCAGAGCTCCTCA+TGG 0.591624 4.3:-65231813 MS.gene045703:CDS
ACTTGAACAAGATGGAACCT+TGG 0.595484 4.3:-65233490 MS.gene045703:CDS
CTATTCAAGATTGGGAGTGA+AGG 0.598153 4.3:-65231100 MS.gene045703:CDS
AACAACATCAAAACCACCAT+AGG 0.601748 4.3:-65230982 MS.gene045703:CDS
TAATCAAAGTTAGCCTGTAG+AGG 0.606992 4.3:+65230857 None:intergenic
AAGACTCTTGTGTTCTACAA+AGG 0.611421 4.3:-65231828 MS.gene045703:CDS
ATGGAACCTTGGGACTTGCA+AGG 0.612104 4.3:-65233479 MS.gene045703:intron
GAAAGTACCCAACAGGGTCA+AGG 0.612193 4.3:-65231938 MS.gene045703:CDS
TGATAATGGAGACTAAGCTC+GGG 0.612739 4.3:+65230932 None:intergenic
CCACCTCAAGAAATGGGTGT+AGG 0.613141 4.3:-65230695 MS.gene045703:CDS
TATGGATGTTATAAGAGAGG+TGG 0.621522 4.3:-65233513 MS.gene045703:CDS
CTAATAGAGCAACAAATGCA+GGG 0.623645 4.3:-65231914 MS.gene045703:CDS
AGAGTGGTAGTGATGGTTTG+AGG 0.624748 4.3:-65230760 MS.gene045703:CDS
AACCGGATAGGTTCCTATGG+TGG 0.626386 4.3:+65230969 None:intergenic
GTATTTGTAGGAAGATGGAT+GGG 0.647842 4.3:-65231152 MS.gene045703:intron
GTCGGATGAAATCGAAACCC+CGG 0.647907 4.3:+65233593 None:intergenic
GATCATTGCCATCTTCAAGA+CGG 0.649154 4.3:+65231760 None:intergenic
ATATTTCCTCAACAAATCAA+CGG 0.660597 4.3:-65231042 MS.gene045703:CDS
GTGGTATTTCTTCAGTCACA+AGG 0.667084 4.3:-65231964 MS.gene045703:CDS
AGTATGAGTTCTTCTAATGG+CGG 0.674587 4.3:-65233623 MS.gene045703:CDS
CTAATGGCGGTGTGCCACCG+GGG 0.679366 4.3:-65233610 MS.gene045703:CDS
TTTGTAGGAAGATGGATGGG+TGG 0.681897 4.3:-65231149 MS.gene045703:intron
GATCGACACCACAAAACGAG+TGG 0.701290 4.3:-65231983 MS.gene045703:CDS
AGGACAGAAAGTACCCAACA+GGG 0.718761 4.3:-65231944 MS.gene045703:CDS
GGATGAAATCGAAACCCCGG+TGG 0.740489 4.3:+65233596 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTCTTTATTTTGAAT+GGG + chr4.3:65231983-65232002 None:intergenic 10.0%
!! CTAAAAAAAAAAAACATGAA+AGG + chr4.3:65230998-65231017 None:intergenic 15.0%
!!! ACTCATTTTTGTTTATATTT+TGG - chr4.3:65232549-65232568 MS.gene045703:intron 15.0%
!!! CTAATTTTTGCTTATATTTT+TGG + chr4.3:65232471-65232490 None:intergenic 15.0%
!!! CTCATTTTTGTTTATATTTT+GGG - chr4.3:65232550-65232569 MS.gene045703:intron 15.0%
!!! GTTTTTTTCTTTATTTTGAA+TGG + chr4.3:65231984-65232003 None:intergenic 15.0%
!!! TTCATGTTTTTTTTTTTTAG+TGG - chr4.3:65230998-65231017 MS.gene045703:CDS 15.0%
!! AAATATTATCATGAAGAGTT+TGG - chr4.3:65231806-65231825 MS.gene045703:CDS 20.0%
!! AATTGTGGATGAATTTAATA+TGG + chr4.3:65231785-65231804 None:intergenic 20.0%
!! CAGATAAACACAATAATATA+TGG + chr4.3:65230887-65230906 None:intergenic 20.0%
!! TAAAAAAGGAAATAGATGTA+AGG + chr4.3:65231699-65231718 None:intergenic 20.0%
!! TACACTACATGTATATAAAA+GGG - chr4.3:65230815-65230834 MS.gene045703:CDS 20.0%
!! TATCTGTATCCAAATTTAAT+TGG - chr4.3:65230901-65230920 MS.gene045703:CDS 20.0%
!! TATGAATGAAATGTATTTGT+AGG - chr4.3:65232991-65233010 MS.gene045703:intron 20.0%
!! TCACATTAGATAAAACATTT+AGG + chr4.3:65231624-65231643 None:intergenic 20.0%
!! TCATGATAATATTTCAATTG+TGG + chr4.3:65231800-65231819 None:intergenic 20.0%
!! TCATTACTATTTGAAAAAGA+AGG - chr4.3:65230600-65230619 MS.gene045703:CDS 20.0%
!! TGACAAAAGTTACAATTTAT+GGG + chr4.3:65232743-65232762 None:intergenic 20.0%
!! TTAAACTAATGTAATCGATT+TGG + chr4.3:65231352-65231371 None:intergenic 20.0%
!! TTACACTACATGTATATAAA+AGG - chr4.3:65230814-65230833 MS.gene045703:CDS 20.0%
!! TTAGTAAACACTACAAATTA+TGG + chr4.3:65232111-65232130 None:intergenic 20.0%
!! TTGACAAAAGTTACAATTTA+TGG + chr4.3:65232744-65232763 None:intergenic 20.0%
!! TTTATCTAATGTGAACAAAA+GGG - chr4.3:65231630-65231649 MS.gene045703:intron 20.0%
!!! ATAAGTTGTTTCACTATAAT+AGG + chr4.3:65233355-65233374 None:intergenic 20.0%
!!! ATACATTATGTTTAAGTTTC+TGG - chr4.3:65232085-65232104 MS.gene045703:intron 20.0%
!!! ATCCATATCAAATTTTTGAA+AGG + chr4.3:65230629-65230648 None:intergenic 20.0%
!!! ATTTAAAATTTGTTACAACG+TGG + chr4.3:65232651-65232670 None:intergenic 20.0%
!!! CTTATTTAACTTTAGTGTTT+GGG - chr4.3:65230714-65230733 MS.gene045703:CDS 20.0%
!!! TCTTATTTAACTTTAGTGTT+TGG - chr4.3:65230713-65230732 MS.gene045703:CDS 20.0%
!!! TTTAAAATTTGTTACAACGT+GGG + chr4.3:65232650-65232669 None:intergenic 20.0%
!!! TTTTATCTAATGTGAACAAA+AGG - chr4.3:65231629-65231648 MS.gene045703:intron 20.0%
!!! TTTTCTTTTTTGACAAAGTT+TGG + chr4.3:65231320-65231339 None:intergenic 20.0%
!!! TTTTGCTTATATTTTTGGAT+GGG + chr4.3:65232466-65232485 None:intergenic 20.0%
!!! TTTTTGCTTATATTTTTGGA+TGG + chr4.3:65232467-65232486 None:intergenic 20.0%
!!! TTTTTGTTTATATTTTGGGA+CGG - chr4.3:65232554-65232573 MS.gene045703:intron 20.0%
! AAGAAAAACCTATTCAAGAT+TGG - chr4.3:65233046-65233065 MS.gene045703:intron 25.0%
! ACAAAAGTTACAATTTATGG+GGG + chr4.3:65232741-65232760 None:intergenic 25.0%
! AGAAAAACCTATTCAAGATT+GGG - chr4.3:65233047-65233066 MS.gene045703:intron 25.0%
! AGGAATACTTACAAGAAAAT+TGG - chr4.3:65232297-65232316 MS.gene045703:intron 25.0%
! ATATTTCCTCAACAAATCAA+CGG - chr4.3:65233113-65233132 MS.gene045703:intron 25.0%
! ATGCATAAAATATGTATGTC+TGG + chr4.3:65231038-65231057 None:intergenic 25.0%
! GACAAAAGTTACAATTTATG+GGG + chr4.3:65232742-65232761 None:intergenic 25.0%
! GTATCCAAATTTAATTGGTT+AGG - chr4.3:65230906-65230925 MS.gene045703:CDS 25.0%
! GTCCTTTCAAAAATTTGATA+TGG - chr4.3:65230624-65230643 MS.gene045703:CDS 25.0%
! TCATCCTAACCAATTAAATT+TGG + chr4.3:65230913-65230932 None:intergenic 25.0%
! TGCATAAAATATGTATGTCT+GGG + chr4.3:65231037-65231056 None:intergenic 25.0%
!! ATTTTTGTATCTCAAAACGT+TGG - chr4.3:65231378-65231397 MS.gene045703:intron 25.0%
!! GATAGATGTTTGACATTTTT+GGG + chr4.3:65232805-65232824 None:intergenic 25.0%
!! GGTGAAGTATTTAACATATA+CGG + chr4.3:65232445-65232464 None:intergenic 25.0%
!! TGATAGATGTTTGACATTTT+TGG + chr4.3:65232806-65232825 None:intergenic 25.0%
!!! TGTTTTTTTTTTTTAGTGGC+CGG - chr4.3:65231002-65231021 MS.gene045703:CDS 25.0%
!!! TTTTAATTGTAAGAGACCTA+AGG + chr4.3:65231146-65231165 None:intergenic 25.0%
AAATCAATCAGCTTTCATTG+AGG - chr4.3:65233584-65233603 MS.gene045703:CDS 30.0%
AATCAATCAGCTTTCATTGA+GGG - chr4.3:65233585-65233604 MS.gene045703:CDS 30.0%
ATGGAGGAAATTAACGAATA+GGG + chr4.3:65232833-65232852 None:intergenic 30.0%
CAGTTATTACAAAGCATGAA+AGG + chr4.3:65231096-65231115 None:intergenic 30.0%
CTACGAACTCCTTTATAATT+TGG - chr4.3:65232003-65232022 MS.gene045703:intron 30.0%
GAAATGTATTTGTAGGAAGA+TGG - chr4.3:65232998-65233017 MS.gene045703:intron 30.0%
GAGGAAATATTGTTCATTTG+TGG + chr4.3:65233103-65233122 None:intergenic 30.0%
GATGTAGGACCAAATTATAA+AGG + chr4.3:65232015-65232034 None:intergenic 30.0%
GCATAAAATATGTATGTCTG+GGG + chr4.3:65231036-65231055 None:intergenic 30.0%
GTAATGAAGTAACTCTTCAT+CGG + chr4.3:65230587-65230606 None:intergenic 30.0%
TATCTTGTCATCTTAACCTT+GGG + chr4.3:65231119-65231138 None:intergenic 30.0%
TGATATGGATGTTATAAGAG+AGG - chr4.3:65230639-65230658 MS.gene045703:CDS 30.0%
TGCACAGAAAAATGTAAGAT+TGG - chr4.3:65232150-65232169 MS.gene045703:intron 30.0%
TTATCTTGTCATCTTAACCT+TGG + chr4.3:65231120-65231139 None:intergenic 30.0%
TTATTTATGCTAGTCGATGT+AGG + chr4.3:65232030-65232049 None:intergenic 30.0%
TTGAAAGTTTGGTAGGAAAA+GGG + chr4.3:65231595-65231614 None:intergenic 30.0%
TTGTTATGACAGTGCATAAA+AGG + chr4.3:65230968-65230987 None:intergenic 30.0%
TTTGAAAGTTTGGTAGGAAA+AGG + chr4.3:65231596-65231615 None:intergenic 30.0%
! ACCTCTGAAAAAGTTTCAAA+AGG + chr4.3:65231762-65231781 None:intergenic 30.0%
! ACTTTTGTATCTCAAAACGT+TGG + chr4.3:65231412-65231431 None:intergenic 30.0%
! TAAGTTTTGCGAAATTCAAC+AGG + chr4.3:65232772-65232791 None:intergenic 30.0%
! TTGATTTTCTCTTTGCATGA+AGG + chr4.3:65233140-65233159 None:intergenic 30.0%
!! GAAAGCTGATTGATTTGATT+GGG + chr4.3:65233580-65233599 None:intergenic 30.0%
!! TGAAAGCTGATTGATTTGAT+TGG + chr4.3:65233581-65233600 None:intergenic 30.0%
!!! ACCTTTTGAAACTTTTTCAG+AGG - chr4.3:65231758-65231777 MS.gene045703:CDS 30.0%
!!! AGTTTTGCAAGTGTTGATAA+TGG + chr4.3:65233240-65233259 None:intergenic 30.0%
!!! GTTTTTTTTTTTTAGTGGCC+GGG - chr4.3:65231003-65231022 MS.gene045703:CDS 30.0%
!!! TTTTTTTTTTTTAGTGGCCG+GGG - chr4.3:65231004-65231023 MS.gene045703:CDS 30.0%
AAAAGTCATGCCACATCATA+GGG - chr4.3:65232905-65232924 MS.gene045703:intron 35.0%
AAAGAGATGCATACATTGGT+AGG + chr4.3:65232420-65232439 None:intergenic 35.0%
AACAACATCAAAACCACCAT+AGG - chr4.3:65233173-65233192 MS.gene045703:intron 35.0%
AAGACTCTTGTGTTCTACAA+AGG - chr4.3:65232327-65232346 MS.gene045703:intron 35.0%
ACTAATAGAGCAACAAATGC+AGG - chr4.3:65232240-65232259 MS.gene045703:intron 35.0%
AGGTATCAAGTTTCAGAATC+AGG - chr4.3:65233415-65233434 MS.gene045703:intron 35.0%
ATAGGTTGTTCTGTCTGTAA+AGG + chr4.3:65233337-65233356 None:intergenic 35.0%
ATCAATCAGCTTTCATTGAG+GGG - chr4.3:65233586-65233605 MS.gene045703:CDS 35.0%
ATGAATGGAGAATGCTTGAT+AGG - chr4.3:65233503-65233522 MS.gene045703:CDS 35.0%
CTAATAGAGCAACAAATGCA+GGG - chr4.3:65232241-65232260 MS.gene045703:intron 35.0%
GATGACAAGATAATTGCCTT+AGG - chr4.3:65231127-65231146 MS.gene045703:CDS 35.0%
GATGGAGGAAATTAACGAAT+AGG + chr4.3:65232834-65232853 None:intergenic 35.0%
GCAAATTCAAGATGTACGAA+AGG + chr4.3:65231937-65231956 None:intergenic 35.0%
GGGGTAATTGACTATTTACT+CGG + chr4.3:65232722-65232741 None:intergenic 35.0%
GTATTTGTAGGAAGATGGAT+GGG - chr4.3:65233003-65233022 MS.gene045703:intron 35.0%
GTCTTGAGCTTTCATAGTTA+GGG - chr4.3:65231858-65231877 MS.gene045703:CDS 35.0%
TATGGATGTTATAAGAGAGG+TGG - chr4.3:65230642-65230661 MS.gene045703:CDS 35.0%
TGTATTTGTAGGAAGATGGA+TGG - chr4.3:65233002-65233021 MS.gene045703:intron 35.0%
TGTCTTGAGCTTTCATAGTT+AGG - chr4.3:65231857-65231876 MS.gene045703:CDS 35.0%
TTAGGCTCTGTTTGAAAGTT+TGG + chr4.3:65231606-65231625 None:intergenic 35.0%
TTATGACAGTGCATAAAAGG+AGG + chr4.3:65230965-65230984 None:intergenic 35.0%
! AAGAAATACCACTCGTTTTG+TGG + chr4.3:65232183-65232202 None:intergenic 35.0%
! TAATCAAAGTTAGCCTGTAG+AGG + chr4.3:65233301-65233320 None:intergenic 35.0%
! TCGTACATCTTGAATTTGCT+TGG - chr4.3:65231938-65231957 MS.gene045703:CDS 35.0%
!! TATCATGAAGAGTTTGGTGT+TGG - chr4.3:65231812-65231831 MS.gene045703:CDS 35.0%
!! TTGATAATGGAGACTAAGCT+CGG + chr4.3:65233227-65233246 None:intergenic 35.0%
AAAAGAGGCTACAAGGTTTG+AGG - chr4.3:65233546-65233565 MS.gene045703:CDS 40.0%
AAAGTCATGCCACATCATAG+GGG - chr4.3:65232906-65232925 MS.gene045703:intron 40.0%
AAAGTTTGGTAGGAAAAGGG+AGG + chr4.3:65231592-65231611 None:intergenic 40.0%
AAGTTTGGTAGGAAAAGGGA+GGG + chr4.3:65231591-65231610 None:intergenic 40.0%
AATCCTAGAGATTGTGAGAG+TGG - chr4.3:65233379-65233398 MS.gene045703:intron 40.0%
ACTTGAACAAGATGGAACCT+TGG - chr4.3:65230665-65230684 MS.gene045703:CDS 40.0%
AGTCAATAACCCCTATGATG+TGG + chr4.3:65232918-65232937 None:intergenic 40.0%
CATGAATACCGTCTTGAAGA+TGG - chr4.3:65232387-65232406 MS.gene045703:intron 40.0%
CTATTCAAGATTGGGAGTGA+AGG - chr4.3:65233055-65233074 MS.gene045703:intron 40.0%
CTCATGGACAAAAGACTGAT+TGG - chr4.3:65232358-65232377 MS.gene045703:intron 40.0%
CTTCACTCCCAATCTTGAAT+AGG + chr4.3:65233057-65233076 None:intergenic 40.0%
CTTGAACAAGATGGAACCTT+GGG - chr4.3:65230666-65230685 MS.gene045703:CDS 40.0%
GAAAAGTCATGCCACATCAT+AGG - chr4.3:65232904-65232923 MS.gene045703:intron 40.0%
GAATGATGACTCCACAAAAG+AGG - chr4.3:65233531-65233550 MS.gene045703:CDS 40.0%
GATCATTGCCATCTTCAAGA+CGG + chr4.3:65232398-65232417 None:intergenic 40.0%
GCAACTCTACAAAATTACGC+AGG + chr4.3:65231889-65231908 None:intergenic 40.0%
GCTCTGTTTGAAAGTTTGGT+AGG + chr4.3:65231602-65231621 None:intergenic 40.0%
GGAGAAAGAGATGCATACAT+TGG + chr4.3:65232424-65232443 None:intergenic 40.0%
GTGGTATTTCTTCAGTCACA+AGG - chr4.3:65232191-65232210 MS.gene045703:intron 40.0%
GTGGTGAAGGAATGAATGAA+TGG - chr4.3:65233488-65233507 MS.gene045703:CDS 40.0%
TATTAGTCCTTGACCCTGTT+GGG + chr4.3:65232227-65232246 None:intergenic 40.0%
TGAAGTAACTCTTCATCGGT+CGG + chr4.3:65230583-65230602 None:intergenic 40.0%
TGCTTTGTAATAACTGCCCA+AGG - chr4.3:65231100-65231119 MS.gene045703:CDS 40.0%
TGTGAACCACCTCAAGAAAT+GGG - chr4.3:65233454-65233473 MS.gene045703:intron 40.0%
TTGTGAACCACCTCAAGAAA+TGG - chr4.3:65233453-65233472 MS.gene045703:intron 40.0%
TTGTGGATCTTGATTGTGTG+TGG + chr4.3:65233086-65233105 None:intergenic 40.0%
TTTAGGAGGGATGAGATTAG+AGG + chr4.3:65231563-65231582 None:intergenic 40.0%
! AAACCTTGTAGCCTCTTTTG+TGG + chr4.3:65233545-65233564 None:intergenic 40.0%
! ATTTTACCTTGCAAGTCCCA+AGG + chr4.3:65230685-65230704 None:intergenic 40.0%
! CAATCAGTCTTTTGTCCATG+AGG + chr4.3:65232360-65232379 None:intergenic 40.0%
! TGAGCATAACTCAGTTGGTA+AGG + chr4.3:65231064-65231083 None:intergenic 40.0%
!! TCAGAATCAGGCATTGAAGT+TGG - chr4.3:65233427-65233446 MS.gene045703:intron 40.0%
!! TGATAATGGAGACTAAGCTC+GGG + chr4.3:65233226-65233245 None:intergenic 40.0%
!!! AGATGGATTTTTGGGGCTAT+GGG - chr4.3:65233611-65233630 MS.gene045703:CDS 40.0%
AACCACCATAGGAACCTATC+CGG - chr4.3:65233184-65233203 MS.gene045703:intron 45.0%
ACCATGTGGCAGTGTCAAAT+AGG + chr4.3:65232882-65232901 None:intergenic 45.0%
ACTCCACAAAAGAGGCTACA+AGG - chr4.3:65233539-65233558 MS.gene045703:CDS 45.0%
AGTTTGGTAGGAAAAGGGAG+GGG + chr4.3:65231590-65231609 None:intergenic 45.0%
CAGGAAGAGACAAGTGCATT+AGG - chr4.3:65232277-65232296 MS.gene045703:intron 45.0%
CCTCCATCAACATGCTGATA+TGG - chr4.3:65232846-65232865 MS.gene045703:intron 45.0%
CGACCATATCAGCATGTTGA+TGG + chr4.3:65232852-65232871 None:intergenic 45.0%
CTACCACTCTCACAATCTCT+AGG + chr4.3:65233385-65233404 None:intergenic 45.0%
CTATTAGTCCTTGACCCTGT+TGG + chr4.3:65232228-65232247 None:intergenic 45.0%
CTCAAGAAATGGGTGTAGGA+AGG - chr4.3:65233464-65233483 MS.gene045703:intron 45.0%
CTTCCTACACCCATTTCTTG+AGG + chr4.3:65233466-65233485 None:intergenic 45.0%
TCTCGTGAGCATAACTCAGT+TGG + chr4.3:65231069-65231088 None:intergenic 45.0%
TTCAAGATTGGGAGTGAAGG+TGG - chr4.3:65233058-65233077 MS.gene045703:intron 45.0%
TTTGTAGGAAGATGGATGGG+TGG - chr4.3:65233006-65233025 MS.gene045703:intron 45.0%
! AAGTTAGCCTGTAGAGGTTG+AGG + chr4.3:65233295-65233314 None:intergenic 45.0%
! AGAGGTGGACTTGAACAAGA+TGG - chr4.3:65230657-65230676 MS.gene045703:CDS 45.0%
! AGAGTGGTAGTGATGGTTTG+AGG - chr4.3:65233395-65233414 MS.gene045703:intron 45.0%
! CCATATCAGCATGTTGATGG+AGG + chr4.3:65232849-65232868 None:intergenic 45.0%
! GAGCAACAAATGCAGGGTTT+TGG - chr4.3:65232247-65232266 MS.gene045703:intron 45.0%
! GATTGTGAGAGTGGTAGTGA+TGG - chr4.3:65233388-65233407 MS.gene045703:intron 45.0%
! GCATGACTTTTCTGACCATG+TGG + chr4.3:65232896-65232915 None:intergenic 45.0%
!! AAGGACAGAAAGTACCCAAC+AGG - chr4.3:65232210-65232229 MS.gene045703:intron 45.0%
!! AGGACAGAAAGTACCCAACA+GGG - chr4.3:65232211-65232230 MS.gene045703:intron 45.0%
!! AGGGGAGAGATGGATTTTTG+GGG - chr4.3:65233604-65233623 MS.gene045703:CDS 45.0%
!! GAAGGACCGTTGATTTGTTG+AGG + chr4.3:65233122-65233141 None:intergenic 45.0%
!! GAGGGGAGAGATGGATTTTT+GGG - chr4.3:65233603-65233622 MS.gene045703:CDS 45.0%
!! TGAGGGGAGAGATGGATTTT+TGG - chr4.3:65233602-65233621 MS.gene045703:CDS 45.0%
!!! GAGATGGATTTTTGGGGCTA+TGG - chr4.3:65233610-65233629 MS.gene045703:CDS 45.0%
!! TGAATTTATAATAATAAAAA+AGG + chr4.3:65231713-65231732 None:intergenic 5.0%
!!! ATTAAAATATTTATTTTCAT+TGG + chr4.3:65232055-65232074 None:intergenic 5.0%
AACCGGATAGGTTCCTATGG+TGG + chr4.3:65233189-65233208 None:intergenic 50.0%
AAGATGGATGGGTGGTATGC+AGG - chr4.3:65233014-65233033 MS.gene045703:intron 50.0%
AGATGGATGGGTGGTATGCA+GGG - chr4.3:65233015-65233034 MS.gene045703:intron 50.0%
ATGGAACCTTGGGACTTGCA+AGG - chr4.3:65230676-65230695 MS.gene045703:CDS 50.0%
CCACCTCAAGAAATGGGTGT+AGG - chr4.3:65233460-65233479 MS.gene045703:intron 50.0%
CCTACACCCATTTCTTGAGG+TGG + chr4.3:65233463-65233482 None:intergenic 50.0%
CGAAACCGGATAGGTTCCTA+TGG + chr4.3:65233192-65233211 None:intergenic 50.0%
GAAAAGGGAGGGGAGAGTTT+AGG + chr4.3:65231580-65231599 None:intergenic 50.0%
GAAATGGGTGTAGGAAGGAG+TGG - chr4.3:65233469-65233488 MS.gene045703:intron 50.0%
GATCGACACCACAAAACGAG+TGG - chr4.3:65232172-65232191 MS.gene045703:intron 50.0%
GCCTATTTGACACTGCCACA+TGG - chr4.3:65232878-65232897 MS.gene045703:intron 50.0%
GCTTTCATTGAGGGGAGAGA+TGG - chr4.3:65233594-65233613 MS.gene045703:CDS 50.0%
GTCGGATGAAATCGAAACCC+CGG + chr4.3:65230565-65230584 None:intergenic 50.0%
TACAAAGGCAGAGCTCCTCA+TGG - chr4.3:65232342-65232361 MS.gene045703:intron 50.0%
TTTCGAGCTCGAAACCGGAT+AGG + chr4.3:65233201-65233220 None:intergenic 50.0%
! TATGTCTGGGGTTCAAACCC+CGG + chr4.3:65231024-65231043 None:intergenic 50.0%
!! GAAAGTACCCAACAGGGTCA+AGG - chr4.3:65232217-65232236 MS.gene045703:intron 50.0%
!!! GCAGGGTTTTGGAAAGCTAC+AGG - chr4.3:65232258-65232277 MS.gene045703:intron 50.0%
AAGGGAGGGGAGAGTTTAGG+AGG + chr4.3:65231577-65231596 None:intergenic 55.0%
AGCCTGTAGAGGTTGAGGCT+GGG + chr4.3:65233290-65233309 None:intergenic 55.0%
AGGGAGGGGAGAGTTTAGGA+GGG + chr4.3:65231576-65231595 None:intergenic 55.0%
GGATGAAATCGAAACCCCGG+TGG + chr4.3:65230562-65230581 None:intergenic 55.0%
GGTGTAGGAAGGAGTGGTGA+AGG - chr4.3:65233475-65233494 MS.gene045703:intron 55.0%
TAGAGGTTGAGGCTGGGGTT+GGG + chr4.3:65233284-65233303 None:intergenic 55.0%
TAGCCTGTAGAGGTTGAGGC+TGG + chr4.3:65233291-65233310 None:intergenic 55.0%
TTCTAATGGCGGTGTGCCAC+CGG - chr4.3:65230543-65230562 MS.gene045703:CDS 55.0%
!! GGGCTTTTCGAGCTCGAAAC+CGG + chr4.3:65233206-65233225 None:intergenic 55.0%
ACCCCAGCCTCAACCTCTAC+AGG - chr4.3:65233285-65233304 MS.gene045703:intron 60.0%
GCCTGTAGAGGTTGAGGCTG+GGG + chr4.3:65233289-65233308 None:intergenic 60.0%
GTAGAGGTTGAGGCTGGGGT+TGG + chr4.3:65233285-65233304 None:intergenic 60.0%
TCTAATGGCGGTGTGCCACC+GGG - chr4.3:65230544-65230563 MS.gene045703:CDS 60.0%
CTAATGGCGGTGTGCCACCG+GGG - chr4.3:65230545-65230564 MS.gene045703:CDS 65.0%
GTTGAGGCTGGGGTTGGGAG+TGG + chr4.3:65233279-65233298 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 65230535 65233642 65230535 ID=MS.gene045703
chr4.3 mRNA 65230535 65233642 65230535 ID=MS.gene045703.t1;Parent=MS.gene045703
chr4.3 exon 65233480 65233642 65233480 ID=MS.gene045703.t1.exon1;Parent=MS.gene045703.t1
chr4.3 CDS 65233480 65233642 65233480 ID=cds.MS.gene045703.t1;Parent=MS.gene045703.t1
chr4.3 exon 65231752 65232020 65231752 ID=MS.gene045703.t1.exon2;Parent=MS.gene045703.t1
chr4.3 CDS 65231752 65232020 65231752 ID=cds.MS.gene045703.t1;Parent=MS.gene045703.t1
chr4.3 exon 65230535 65231164 65230535 ID=MS.gene045703.t1.exon3;Parent=MS.gene045703.t1
chr4.3 CDS 65230535 65231164 65230535 ID=cds.MS.gene045703.t1;Parent=MS.gene045703.t1
Gene Sequence

>MS.gene045703

ATGAGTTCTTCTAATGGCGGTGTGCCACCGGGGTTTCGATTTCATCCGACCGATGAAGAGTTACTTCATTACTATTTGAAAAAGAAGGTGTCCTTTCAAAAATTTGATATGGATGTTATAAGAGAGGTGGACTTGAACAAGATGGAACCTTGGGACTTGCAAGGTAAAATAGCAGTTTTCTTATTTAACTTTAGTGTTTGGGCATGTTCTATATATAAGCTTTTTTCATTTTTATACAATCTTCTTTATATATAAGCTTTGAGATTGAGAATATATTAGTTACACTACATGTATATAAAAGGGATCAAAAACTAGTTAATTTTCTTTTTGTTTTGTTATCTTAATTTCTCCATATATTATTGTGTTTATCTGTATCCAAATTTAATTGGTTAGGATGATCATGTTTTCATGATTTTAATATTTACATCCTCCTTTTATGCACTGTCATAACAAAAATCAACCTTTCATGTTTTTTTTTTTTAGTGGCCGGGGTTTGAACCCCAGACATACATATTTTATGCATTGTCCTTACCAACTGAGTTATGCTCACGAGAACAACCTTTCATGCTTTGTAATAACTGCCCAAGGTTAAGATGACAAGATAATTGCCTTAGGTCTCTTACAATTAAAAGAATTTTTTTTGAAGAAAACAAATAAACTTAATGAAAATGTTTCATATTCTATTATTTTCAACTCATATTCTATTATTTTCAACACTAAAATTAATATTATATGAATAAAGATATTAAATCAATTTACTTTATTATCAATTAAAAAAAAAACCAAACTTTGTCAAAAAAGAAAATAAATCAAACCAAATCGATTACATTAGTTTAATTAATAATTTTTGTATCTCAAAACGTTGGAAAATTTTCCAACGTTTTGAGATACAAAAGTTATTAATTAAACTAATGTAATTGATTTATTTTGATTTTTTCTAAGTTAAAATACATTAATCATAAGTATTTATTTATCATTATTTACAAAATCACTCTCAAATTTTTTGAAAGATTTATCTGTTTTCTCCTCTAATCTCATCCCTCCTAAACTCTCCCCTCCCTTTTCCTACCAAACTTTCAAACAGAGCCTAAATGTTTTATCTAATGTGAACAAAAGGGTTCAACAACACATTTTAATAATTTTTAGTAAATTTTAATCAAACCTTACATCTATTTCCTTTTTTATTATTATAAATTCATTTTTGATAAAAATTGTGATTGTTTACCTTTTGAAACTTTTTCAGAGGTCCATATTAAATTCATCCACAATTGAAATATTATCATGAAGAGTTTGGTGTTGGTCAACTTGCACGAAAAAGTGTTTGTCTTGAGCTTTCATAGTTAGGGTGTTACCTGCGTAATTTTGTAGAGTTGCTTATTATGCTACATCATGTTATGTACCTTTCGTACATCTTGAATTTGCTTGGTTTTAATAAATCATTTTTGCCCATTCAAAATAAAGAAAAAAACTACGAACTCCTTTATAATTTGGTCCTACATCGACTAGCATAAATAAAACCAATGAAAATAAATATTTTAATTGATAGTGTTATACATTATGTTTAAGTTTCTGGCCATAATTTGTAGTGTTTACTAACTTTTAAATTTCTTCATGATGCACAGAAAAATGTAAGATTGGATCGACACCACAAAACGAGTGGTATTTCTTCAGTCACAAGGACAGAAAGTACCCAACAGGGTCAAGGACTAATAGAGCAACAAATGCAGGGTTTTGGAAAGCTACAGGAAGAGACAAGTGCATTAGGAATACTTACAAGAAAATTGGAATGAGAAAGACTCTTGTGTTCTACAAAGGCAGAGCTCCTCATGGACAAAAGACTGATTGGATTATGCATGAATACCGTCTTGAAGATGGCAATGATCCTACCAATGTATGCATCTCTTTCTCCGTATATGTTAAATACTTCACCCATCCAAAAATATAAGCAAAAATTAGTCGACAAAAGTTAATGTATTTAGTTCAAAATTTATACAAAATACATCAACTTATACTGACTCATTTTTGTTTATATTTTGGGACGGAGAAGTATTGAGTATCAAGTTTATAATGCACTATTCTAAAGTAAAATCATATGTGTTTAATTTTGATCTACCCACGTTGTAACAAATTTTAAATTGTATTTTAGAAGAAAGAAAAAGAAGTTTTATACTGAACAATTCATAACCGAGTAAATAGTCAATTACCCCCATAAATTGTAACTTTTGTCAAAAAAACCTGTTGAATTTCGCAAAACTTAAAAAAAAAAACCCAAAAATGTCAAACATCTATCATATACCCTATTCGTTAATTTCCTCCATCAACATGCTGATATGGTCGTTAATTGCCTATTTGACACTGCCACATGGTCAGAAAAGTCATGCCACATCATAGGGGTTATTGACTATATTTTTTATTAAAAAAAATCTGATTTTATAAATGTTGATATGTTGATTATATATGAATGAAATGTATTTGTAGGAAGATGGATGGGTGGTATGCAGGGTGTTCAAGAAGAAAAACCTATTCAAGATTGGGAGTGAAGGTGGATCCACACACAATCAAGATCCACAAATGAACAATATTTCCTCAACAAATCAACGGTCCTTCATGCAAAGAGAAAATCAATACTTACTACATCAACAACATCAAAACCACCATAGGAACCTATCCGGTTTCGAGCTCGAAAAGCCCGAGCTTAGTCTCCATTATCAACACTTGCAAAACTCTCAATACTCAATCTTCCACTCCCAACCCCAGCCTCAACCTCTACAGGCTAACTTTGATTACTCATATGCATCACCTTTACAGACAGAACAACCTATTATAGTGAAACAACTTATGACAAATCCTAGAGATTGTGAGAGTGGTAGTGATGGTTTGAGGTATCAAGTTTCAGAATCAGGCATTGAAGTTGGCTCTTGTGAACCACCTCAAGAAATGGGTGTAGGAAGGAGTGGTGAAGGAATGAATGAATGGAGAATGCTTGATAGGCTTGTGAATGATGACTCCACAAAAGAGGCTACAAGGTTTGAGGATGCAAATCCCAATCAAATCAATCAGCTTTCATTGAGGGGAGAGATGGATTTTTGGGGCTATGGGAAACAATGA
Protein sequence

>MS.gene045703.t1

MSSSNGGVPPGFRFHPTDEELLHYYLKKKVSFQKFDMDVIREVDLNKMEPWDLQEKCKIGSTPQNEWYFFSHKDRKYPTGSRTNRATNAGFWKATGRDKCIRNTYKKIGMRKTLVFYKGRAPHGQKTDWIMHEYRLEDGNDPTNEDGWVVCRVFKKKNLFKIGSEGGSTHNQDPQMNNISSTNQRSFMQRENQYLLHQQHQNHHRNLSGFELEKPELSLHYQHLQNSQYSIFHSQPQPQPLQANFDYSYASPLQTEQPIIVKQLMTNPRDCESGSDGLRYQVSESGIEVGSCEPPQEMGVGRSGEGMNEWRMLDRLVNDDSTKEATRFEDANPNQINQLSLRGEMDFWGYGKQ