Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045704.t1 | XP_024638141.1 | 95.6 | 710 | 28 | 1 | 1 | 710 | 1 | 707 | 0.00E+00 | 1400.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045704.t1 | Q9C810 | 52.1 | 710 | 292 | 20 | 2 | 692 | 3 | 683 | 1.6e-198 | 694.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045704.t1 | A0A396I2D4 | 95.6 | 710 | 28 | 1 | 1 | 710 | 1 | 707 | 0.0e+00 | 1400.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene045704.t1 | TR | PHD |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045704.t1 | MTR_4g035550 | 95.487 | 709 | 29 | 1 | 1 | 709 | 1 | 706 | 0.0 | 1414 |
| MS.gene045704.t1 | MTR_1g076990 | 49.356 | 699 | 335 | 9 | 1 | 693 | 2 | 687 | 0.0 | 683 |
| MS.gene045704.t1 | MTR_1g076990 | 49.281 | 556 | 263 | 9 | 144 | 693 | 3 | 545 | 0.0 | 530 |
| MS.gene045704.t1 | MTR_1g076990 | 45.946 | 481 | 241 | 9 | 220 | 693 | 49 | 517 | 2.17e-137 | 415 |
| MS.gene045704.t1 | MTR_5g040700 | 32.000 | 625 | 348 | 19 | 88 | 674 | 76 | 661 | 1.59e-90 | 296 |
| MS.gene045704.t1 | MTR_5g077750 | 27.755 | 735 | 393 | 20 | 12 | 672 | 11 | 681 | 3.36e-84 | 281 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045704.t1 | AT1G33420 | 52.241 | 714 | 293 | 21 | 2 | 696 | 3 | 687 | 0.0 | 705 |
| MS.gene045704.t1 | AT1G33420 | 51.252 | 599 | 250 | 16 | 112 | 696 | 12 | 582 | 0.0 | 585 |
| MS.gene045704.t1 | AT5G22260 | 29.902 | 612 | 367 | 13 | 88 | 668 | 81 | 661 | 5.67e-85 | 282 |
| MS.gene045704.t1 | AT1G66170 | 27.987 | 636 | 358 | 16 | 82 | 668 | 69 | 653 | 7.10e-78 | 264 |
| MS.gene045704.t1 | AT2G01810 | 26.488 | 672 | 349 | 20 | 81 | 668 | 72 | 682 | 8.22e-62 | 220 |
| MS.gene045704.t1 | AT2G07714 | 34.746 | 118 | 74 | 1 | 214 | 328 | 1 | 118 | 3.79e-22 | 95.1 |
Find 179 sgRNAs with CRISPR-Local
Find 245 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTACAGTCAAGAAGCTTTC+TGG | 0.134184 | 4.3:+65256333 | None:intergenic |
| GGTAATTGGGGTTATGAATT+TGG | 0.134330 | 4.3:-65257109 | MS.gene045704:CDS |
| GATCTGATATTATGGGTTTC+TGG | 0.138269 | 4.3:-65257334 | MS.gene045704:CDS |
| GGTCACTTGCTTACTCTTAA+TGG | 0.175979 | 4.3:-65257386 | MS.gene045704:CDS |
| GTTACCTTGCTTCAGATAAT+TGG | 0.198863 | 4.3:+65257613 | None:intergenic |
| GGCATTCATGGTATGGTAAT+TGG | 0.203027 | 4.3:-65257123 | MS.gene045704:CDS |
| ATGGATTTGTCCAAGAAATT+TGG | 0.204374 | 4.3:-65257181 | MS.gene045704:CDS |
| TCTCTCCGGATCTGATATTA+TGG | 0.225259 | 4.3:-65257342 | MS.gene045704:CDS |
| CTTCTGCCGCCGTGCCGTTC+CGG | 0.242311 | 4.3:-65258657 | MS.gene045704:CDS |
| CCTGTAATTTATTATGTTCA+TGG | 0.246154 | 4.3:-65256829 | MS.gene045704:CDS |
| CACCCATTTGGCCTCATTAC+AGG | 0.263526 | 4.3:+65256745 | None:intergenic |
| ATCAGAAATCACTTGCTCTT+TGG | 0.265036 | 4.3:+65256444 | None:intergenic |
| AATATAGACCAAAGATTAAT+AGG | 0.265549 | 4.3:-65256375 | MS.gene045704:CDS |
| GGTGATGGGTGGTCTTCTTT+AGG | 0.279988 | 4.3:+65256220 | None:intergenic |
| TTGAACCAATTCCAACAAAA+AGG | 0.282288 | 4.3:+65256907 | None:intergenic |
| TTTAGCAGTCTCTGCACTCC+TGG | 0.291770 | 4.3:+65256871 | None:intergenic |
| GTGACAAGGCAAACTCTTAA+AGG | 0.292184 | 4.3:-65256725 | MS.gene045704:CDS |
| GTAATTGGGGTTATGAATTT+GGG | 0.295494 | 4.3:-65257108 | MS.gene045704:CDS |
| TTTGTAGCCGTGAAACTTCT+AGG | 0.308688 | 4.3:-65256097 | MS.gene045704:CDS |
| AGCGATATCACTTCATAATA+AGG | 0.310055 | 4.3:-65257695 | MS.gene045704:CDS |
| GCATTCATGGTATGGTAATT+GGG | 0.312049 | 4.3:-65257122 | MS.gene045704:CDS |
| CTCTCCGGATCTGATATTAT+GGG | 0.313811 | 4.3:-65257341 | MS.gene045704:CDS |
| TATTTCTCTTTACCAGTCAT+TGG | 0.315867 | 4.3:-65256966 | MS.gene045704:CDS |
| ATAATCCAGTCCAAATTTCT+TGG | 0.316954 | 4.3:+65257171 | None:intergenic |
| CCATGAACATAATAAATTAC+AGG | 0.344829 | 4.3:+65256829 | None:intergenic |
| CCTGTCCTCATTATCGTTCC+AGG | 0.345172 | 4.3:-65257020 | MS.gene045704:CDS |
| GTATACCCTAAAATTCCTTC+TGG | 0.348946 | 4.3:-65256050 | MS.gene045704:CDS |
| CATCTAGTGCTATTGAATTC+AGG | 0.352626 | 4.3:-65256592 | MS.gene045704:intron |
| TTTGTGCTGCTATGTCTGTT+AGG | 0.352835 | 4.3:-65257304 | MS.gene045704:intron |
| CGCCATCTTGTATGCATCTT+CGG | 0.374613 | 4.3:+65257066 | None:intergenic |
| AGTTTGCCTTGTCACCCATT+TGG | 0.383313 | 4.3:+65256733 | None:intergenic |
| ATATTATGGGTTTCTGGGAT+AGG | 0.384205 | 4.3:-65257328 | MS.gene045704:CDS |
| ATCTGATATTATGGGTTTCT+GGG | 0.386047 | 4.3:-65257333 | MS.gene045704:CDS |
| CGTTCCGGAACGGTGTTTAC+CGG | 0.393085 | 4.3:-65258642 | MS.gene045704:CDS |
| GCCGTGAAACTTCTAGGATA+TGG | 0.393856 | 4.3:-65256091 | MS.gene045704:CDS |
| ACTGTCAATTCCAGCACATC+TGG | 0.404816 | 4.3:+65255853 | None:intergenic |
| TGACAAGGCAAACTCTTAAA+GGG | 0.406437 | 4.3:-65256724 | MS.gene045704:CDS |
| GGTTATGAGGTCCTCGATCC+TGG | 0.408649 | 4.3:+65257002 | None:intergenic |
| CAGAAATATCTCCGGTGGTT+GGG | 0.414746 | 4.3:+65258686 | None:intergenic |
| GCAATGGAGCTTAATCCATT+AGG | 0.416846 | 4.3:+65256478 | None:intergenic |
| CAATTGCCAGAGGGCATTCA+TGG | 0.418503 | 4.3:-65257135 | MS.gene045704:CDS |
| AGACCGAAGTCAAGAAGCTC+TGG | 0.418880 | 4.3:+65256677 | None:intergenic |
| CTTCTGTTCCTCTCTCCATT+CGG | 0.420523 | 4.3:+65255963 | None:intergenic |
| CGGCACGGCGGCAGAAGCAG+CGG | 0.424844 | 4.3:+65258663 | None:intergenic |
| CATGTGATACCTGTGGTGTC+TGG | 0.429395 | 4.3:-65255883 | MS.gene045704:CDS |
| TGTGATCAATGTCGTGTTGT+TGG | 0.430361 | 4.3:-65258448 | MS.gene045704:intron |
| TATACCCTAAAATTCCTTCT+GGG | 0.437390 | 4.3:-65256049 | MS.gene045704:CDS |
| GGGGCAGTGGGTAGGCGTAT+TGG | 0.443315 | 4.3:-65256704 | MS.gene045704:CDS |
| AGATTGGCTCATGTGCCTAA+TGG | 0.445142 | 4.3:-65256493 | MS.gene045704:CDS |
| GCAAACTCTTAAAGGGGCAG+TGG | 0.450934 | 4.3:-65256717 | MS.gene045704:CDS |
| ACCATATCCTAGAAGTTTCA+CGG | 0.450976 | 4.3:+65256090 | None:intergenic |
| ATTAACTCAGGCGGTGGTGA+TGG | 0.451540 | 4.3:+65256205 | None:intergenic |
| TTGAACTTCAACTGTACCAT+TGG | 0.453345 | 4.3:+65256021 | None:intergenic |
| TGCCTTCAGCTCTTAAGATC+TGG | 0.455075 | 4.3:-65256267 | MS.gene045704:CDS |
| ATGTGTTTAATTTACAAGCC+TGG | 0.455360 | 4.3:+65255765 | None:intergenic |
| TGGCTGCATTCCAGATGTGC+TGG | 0.456271 | 4.3:-65255863 | MS.gene045704:CDS |
| CAAGGGAAATCAGTTGCAAA+TGG | 0.466137 | 4.3:-65256644 | MS.gene045704:CDS |
| TCACTTGCTCTTTGGAAGGA+TGG | 0.470398 | 4.3:+65256452 | None:intergenic |
| TGACTGTAAGCAATTTATGA+AGG | 0.473976 | 4.3:-65256320 | MS.gene045704:CDS |
| GTGCCTGTAATGAGGCCAAA+TGG | 0.478860 | 4.3:-65256748 | MS.gene045704:CDS |
| CATGGTGTTGTACATGCTAA+TGG | 0.479985 | 4.3:-65257413 | MS.gene045704:CDS |
| CGTGTTGGAGAAGTTGGTGA+TGG | 0.480654 | 4.3:-65258544 | MS.gene045704:CDS |
| CATTTCTGCTGATGATCTTG+AGG | 0.481146 | 4.3:-65257480 | MS.gene045704:CDS |
| CACCAGTGACTTCATTCAAA+AGG | 0.481665 | 4.3:+65256152 | None:intergenic |
| TTGCATGATCAGACAGAAAC+CGG | 0.482164 | 4.3:+65258623 | None:intergenic |
| GTTGTACATGCTAATGGTTA+TGG | 0.485683 | 4.3:-65257407 | MS.gene045704:CDS |
| TCCCCAGAGCTTCTTGACTT+CGG | 0.486064 | 4.3:-65256680 | MS.gene045704:CDS |
| GATGGAGGTGATGTTTCGTC+TGG | 0.488976 | 4.3:-65258526 | MS.gene045704:CDS |
| CTGCTGATGATCTTGAGGAA+TGG | 0.489195 | 4.3:-65257475 | MS.gene045704:CDS |
| TTAGCAGTCTCTGCACTCCT+GGG | 0.490833 | 4.3:+65256872 | None:intergenic |
| AGGTGATGTTTCGTCTGGTT+TGG | 0.491601 | 4.3:-65258521 | MS.gene045704:CDS |
| CTCTTAAAGGGGCAGTGGGT+AGG | 0.492217 | 4.3:-65256712 | MS.gene045704:CDS |
| TGGCAGATCTTGTTTCGTGT+TGG | 0.492289 | 4.3:-65258559 | MS.gene045704:CDS |
| TGGGGTTATGAATTTGGGAC+TGG | 0.492477 | 4.3:-65257103 | MS.gene045704:CDS |
| GTTCAGTTTCAGCCAATGAC+TGG | 0.494050 | 4.3:+65256954 | None:intergenic |
| ACATCTCTTACATACAAACT+TGG | 0.497300 | 4.3:+65255814 | None:intergenic |
| GAGAGGAACAGAAGAATGGA+AGG | 0.497458 | 4.3:-65255954 | MS.gene045704:CDS |
| ATGGGTGGTCTTCTTTAGGA+TGG | 0.498222 | 4.3:+65256224 | None:intergenic |
| TAGGGTATACACACGATCTC+GGG | 0.503961 | 4.3:+65256063 | None:intergenic |
| CTAAGGATGATGATGGAGAA+AGG | 0.503983 | 4.3:-65255913 | MS.gene045704:CDS |
| AGAGAAATAACAGACTGTAC+AGG | 0.504612 | 4.3:+65256980 | None:intergenic |
| TTTGTCCAAGAAATTTGGAC+TGG | 0.508061 | 4.3:-65257176 | MS.gene045704:CDS |
| TTAGGGTATACACACGATCT+CGG | 0.508674 | 4.3:+65256062 | None:intergenic |
| GAAACCCATAATATCAGATC+CGG | 0.515739 | 4.3:+65257337 | None:intergenic |
| GGTGGCTCGTCGCTTCTCTC+CGG | 0.517601 | 4.3:-65257356 | MS.gene045704:CDS |
| GCAGAAATATCTCCGGTGGT+TGG | 0.518373 | 4.3:+65258685 | None:intergenic |
| TTTCTCTCATTCCCAACCAC+CGG | 0.518527 | 4.3:-65258697 | MS.gene045704:CDS |
| GAAACCGGTAAACACCGTTC+CGG | 0.520178 | 4.3:+65258638 | None:intergenic |
| TGATGTCGAAGAGGTGCAGC+AGG | 0.521310 | 4.3:-65256798 | MS.gene045704:CDS |
| AATGGTACAGTTGAAGTTCA+AGG | 0.522348 | 4.3:-65256019 | MS.gene045704:CDS |
| TTGTTTCGTGTTGGAGAAGT+TGG | 0.522586 | 4.3:-65258550 | MS.gene045704:CDS |
| TGGAAGGTTGACTGCATTTG+TGG | 0.523381 | 4.3:-65255938 | MS.gene045704:CDS |
| GCCGCCGTGCCGTTCCGGAA+CGG | 0.526524 | 4.3:-65258652 | MS.gene045704:CDS |
| GAGAAATAACAGACTGTACA+GGG | 0.531821 | 4.3:+65256981 | None:intergenic |
| GCCAGAGGGCATTCATGGTA+TGG | 0.532503 | 4.3:-65257130 | MS.gene045704:CDS |
| TTACAGGAAGGTTACTGTGA+TGG | 0.535841 | 4.3:-65257200 | MS.gene045704:intron |
| TTAACTCAGGCGGTGGTGAT+GGG | 0.538447 | 4.3:+65256206 | None:intergenic |
| TTTGGAAGGATGGCTTGCAA+TGG | 0.539310 | 4.3:+65256462 | None:intergenic |
| TGGAGAGAGGAACAGAAGAA+TGG | 0.542622 | 4.3:-65255958 | MS.gene045704:CDS |
| GAAATCACTTGCTCTTTGGA+AGG | 0.542791 | 4.3:+65256448 | None:intergenic |
| TGCCTGTAATGAGGCCAAAT+GGG | 0.548171 | 4.3:-65256747 | MS.gene045704:CDS |
| ACATAATAAATTACAGGGAG+TGG | 0.548311 | 4.3:+65256835 | None:intergenic |
| CAAAGACCTTGCACTAAATG+TGG | 0.549659 | 4.3:-65257645 | MS.gene045704:CDS |
| CTTACTCTTAATGGAAGAGA+AGG | 0.551976 | 4.3:-65257377 | MS.gene045704:CDS |
| TTCCTTCTGGGGTCAACCAA+TGG | 0.553492 | 4.3:-65256037 | MS.gene045704:CDS |
| GGTGCAGCAGGCTTTGATGA+AGG | 0.554433 | 4.3:-65256786 | MS.gene045704:CDS |
| AATCCGTGTGGGAGATAACC+AGG | 0.554516 | 4.3:-65255783 | MS.gene045704:CDS |
| TACCATTGGTTGACCCCAGA+AGG | 0.556401 | 4.3:+65256035 | None:intergenic |
| TGACTGCATTTGTGGTACTA+AGG | 0.556557 | 4.3:-65255930 | MS.gene045704:CDS |
| AAGAGGATGTTACGAGGTCG+AGG | 0.557183 | 4.3:-65258480 | MS.gene045704:CDS |
| CACATATTGCAGAGATGAAG+CGG | 0.558172 | 4.3:-65255747 | MS.gene045704:CDS |
| CCTGGAACGATAATGAGGAC+AGG | 0.559753 | 4.3:+65257020 | None:intergenic |
| TTCGGTCTTAAGCACTTGCA+AGG | 0.560600 | 4.3:-65256662 | MS.gene045704:CDS |
| GAAATCAGTTGCAAATGGAA+TGG | 0.561635 | 4.3:-65256639 | MS.gene045704:CDS |
| CACCAGATCTTAAGAGCTGA+AGG | 0.563451 | 4.3:+65256265 | None:intergenic |
| TGAGAGAAAATCGTAAAGAT+CGG | 0.568309 | 4.3:+65258711 | None:intergenic |
| GTTGGAGAAGTTGGTGATGG+AGG | 0.568722 | 4.3:-65258541 | MS.gene045704:CDS |
| CATGAACATAATAAATTACA+GGG | 0.569899 | 4.3:+65256830 | None:intergenic |
| TACTCTTGACATTGTTGAAG+AGG | 0.570128 | 4.3:-65258497 | MS.gene045704:CDS |
| CTCTCCAATTATCTGAAGCA+AGG | 0.571531 | 4.3:-65257617 | MS.gene045704:intron |
| ACCATACCATGAATGCCCTC+TGG | 0.571735 | 4.3:+65257129 | None:intergenic |
| ACAGACTGTACAGGGTTATG+AGG | 0.572142 | 4.3:+65256989 | None:intergenic |
| GGAGTTCCACATTTAGTGCA+AGG | 0.575869 | 4.3:+65257639 | None:intergenic |
| GAATTCAATAGCACTAGATG+TGG | 0.582215 | 4.3:+65256595 | None:intergenic |
| TCGATCCTGGAACGATAATG+AGG | 0.584434 | 4.3:+65257015 | None:intergenic |
| TGCTTCATGCAATTGCCAGA+GGG | 0.584514 | 4.3:-65257144 | MS.gene045704:CDS |
| TAATGAGGACAGGGGCATGT+TGG | 0.585572 | 4.3:+65257030 | None:intergenic |
| AGCACAATTAACTCAGGCGG+TGG | 0.587016 | 4.3:+65256199 | None:intergenic |
| CTGGAACGATAATGAGGACA+GGG | 0.587261 | 4.3:+65257021 | None:intergenic |
| GACCGAAGTCAAGAAGCTCT+GGG | 0.590778 | 4.3:+65256678 | None:intergenic |
| AGCAGCGGCAGAAATATCTC+CGG | 0.594057 | 4.3:+65258678 | None:intergenic |
| AGGTCTTTGATATGCTGCAT+TGG | 0.594618 | 4.3:+65257659 | None:intergenic |
| ACTCAGGCGGTGGTGATGGG+TGG | 0.596918 | 4.3:+65256209 | None:intergenic |
| CTTGCTTCAGATAATTGGAG+AGG | 0.597599 | 4.3:+65257618 | None:intergenic |
| TTGCTTCATGCAATTGCCAG+AGG | 0.599692 | 4.3:-65257145 | MS.gene045704:CDS |
| TGGCTTAGCACGATTCCGAA+TGG | 0.602115 | 4.3:-65255978 | MS.gene045704:CDS |
| ATCTGCCACGTCATCAACGA+CGG | 0.603107 | 4.3:+65258574 | None:intergenic |
| TCAACATTAGTAGCATTCAA+AGG | 0.603217 | 4.3:+65256175 | None:intergenic |
| CGGTAAACACCGTTCCGGAA+CGG | 0.603326 | 4.3:+65258643 | None:intergenic |
| ACTCTTAATGGAAGAGAAGG+TGG | 0.606675 | 4.3:-65257374 | MS.gene045704:CDS |
| TGTGGTACTAAGGATGATGA+TGG | 0.607260 | 4.3:-65255920 | MS.gene045704:CDS |
| CATTCATGGTATGGTAATTG+GGG | 0.608012 | 4.3:-65257121 | MS.gene045704:CDS |
| CTCTTACATACAAACTTGGA+AGG | 0.608157 | 4.3:+65255818 | None:intergenic |
| GGGTCTTTCGTTCATAACCA+TGG | 0.609508 | 4.3:+65258762 | None:intergenic |
| TACCGAAGATGCATACAAGA+TGG | 0.612813 | 4.3:-65257068 | MS.gene045704:CDS |
| CTGGAATTGACAGTGCTGAT+GGG | 0.613480 | 4.3:-65255844 | MS.gene045704:CDS |
| ATGAGGCCAAATGGGTGACA+AGG | 0.617957 | 4.3:-65256739 | MS.gene045704:CDS |
| AAAGGCAGCACAATTAACTC+AGG | 0.618250 | 4.3:+65256193 | None:intergenic |
| GGTTTCTGTCTGATCATGCA+AGG | 0.619590 | 4.3:-65258621 | MS.gene045704:CDS |
| CAAACTCTTAAAGGGGCAGT+GGG | 0.620060 | 4.3:-65256716 | MS.gene045704:CDS |
| GCTGGAATTGACAGTGCTGA+TGG | 0.620926 | 4.3:-65255845 | MS.gene045704:CDS |
| TGCATCAAGTGCCTGTAATG+AGG | 0.624858 | 4.3:-65256756 | MS.gene045704:CDS |
| TCGGTCTTAAGCACTTGCAA+GGG | 0.628349 | 4.3:-65256661 | MS.gene045704:CDS |
| TCATTATCGTTCCAGGATCG+AGG | 0.631565 | 4.3:-65257013 | MS.gene045704:CDS |
| AACACCGTTCCGGAACGGCA+CGG | 0.638834 | 4.3:+65258648 | None:intergenic |
| AACAACACACATCTTCTGCA+TGG | 0.642554 | 4.3:-65257431 | MS.gene045704:CDS |
| GCACGATTCCGAATGGAGAG+AGG | 0.643389 | 4.3:-65255971 | MS.gene045704:CDS |
| GACGAGAAATGATGTCGAAG+AGG | 0.646283 | 4.3:-65256807 | MS.gene045704:CDS |
| ATACCCTAAAATTCCTTCTG+GGG | 0.646521 | 4.3:-65256048 | MS.gene045704:CDS |
| AATTCAATAGCACTAGATGT+GGG | 0.647489 | 4.3:+65256596 | None:intergenic |
| TGATATCGCTTTCGACACAC+AGG | 0.648182 | 4.3:+65257708 | None:intergenic |
| CAAAATCGAGCAAATGACCT+CGG | 0.649705 | 4.3:-65256293 | MS.gene045704:CDS |
| GGCAGCACAATTAACTCAGG+CGG | 0.652831 | 4.3:+65256196 | None:intergenic |
| GGAATGCAGCCAGACACCAC+AGG | 0.654719 | 4.3:+65255874 | None:intergenic |
| GACAAGGCAAACTCTTAAAG+GGG | 0.656461 | 4.3:-65256723 | MS.gene045704:CDS |
| TGTGTTAACTCAATCCGTGT+GGG | 0.658395 | 4.3:-65255794 | MS.gene045704:CDS |
| AGCGGCAGAAATATCTCCGG+TGG | 0.660337 | 4.3:+65258681 | None:intergenic |
| ATGTGTTAACTCAATCCGTG+TGG | 0.672293 | 4.3:-65255795 | MS.gene045704:CDS |
| AAAGATTAATAGGAAAACAG+TGG | 0.680975 | 4.3:-65256365 | MS.gene045704:CDS |
| AAGCCTGGTTATCTCCCACA+CGG | 0.684838 | 4.3:+65255780 | None:intergenic |
| ATGGTTGTATCATCAACTTG+AGG | 0.693179 | 4.3:-65257456 | MS.gene045704:CDS |
| AAGAGCTGAAGGCAGCTCCG+AGG | 0.699457 | 4.3:+65256276 | None:intergenic |
| ACCGAAGTCAAGAAGCTCTG+GGG | 0.701812 | 4.3:+65256679 | None:intergenic |
| CGAAGATGCATACAAGATGG+CGG | 0.703099 | 4.3:-65257065 | MS.gene045704:CDS |
| TGGAACGATAATGAGGACAG+GGG | 0.703505 | 4.3:+65257022 | None:intergenic |
| ACCGTTCCGGAACGGCACGG+CGG | 0.727611 | 4.3:+65258651 | None:intergenic |
| ATATTGCAGAGATGAAGCGG+TGG | 0.735388 | 4.3:-65255744 | MS.gene045704:CDS |
| ATGTTAGCATGTGATACCTG+TGG | 0.742288 | 4.3:-65255890 | MS.gene045704:CDS |
| TTGTTGAAGAGGATGTTACG+AGG | 0.760276 | 4.3:-65258486 | MS.gene045704:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAACTGTAATAT+AGG | + | chr4.3:65256159-65256178 | None:intergenic | 10.0% |
| !! | TTCTTTAAATATAAGAAAAT+AGG | - | chr4.3:65256474-65256493 | MS.gene045704:CDS | 10.0% |
| !!! | AATATAAAAAATGTGAATTT+TGG | - | chr4.3:65258750-65258769 | MS.gene045704:CDS | 10.0% |
| !!! | TTATTTTCTATTTTTTTTTG+GGG | - | chr4.3:65256061-65256080 | MS.gene045704:CDS | 10.0% |
| !! | TAAATTTAGATTTAAAAAGC+TGG | - | chr4.3:65256384-65256403 | MS.gene045704:CDS | 15.0% |
| !!! | TATATTTGATCATTTTTTCA+GGG | + | chr4.3:65258056-65258075 | None:intergenic | 15.0% |
| !!! | TATTTTCTATTTTTTTTTGG+GGG | - | chr4.3:65256062-65256081 | MS.gene045704:CDS | 15.0% |
| !! | AATATAGACCAAAGATTAAT+AGG | - | chr4.3:65258070-65258089 | MS.gene045704:intron | 20.0% |
| !! | CATGAACATAATAAATTACA+GGG | + | chr4.3:65257618-65257637 | None:intergenic | 20.0% |
| !!! | AATTTTGTCAAGAAAAAAGT+CGG | - | chr4.3:65256419-65256438 | MS.gene045704:CDS | 20.0% |
| !!! | ATTGTGCTATAAATTTTTAC+AGG | - | chr4.3:65257229-65257248 | MS.gene045704:intron | 20.0% |
| !!! | CTATATTTGATCATTTTTTC+AGG | + | chr4.3:65258057-65258076 | None:intergenic | 20.0% |
| !!! | TTTCTAATTTGCTGTAATTT+AGG | - | chr4.3:65256359-65256378 | MS.gene045704:CDS | 20.0% |
| !!! | TTTTTTATATTACAACGAAC+AGG | + | chr4.3:65258741-65258760 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTCAAACTACGT+AGG | - | chr4.3:65256170-65256189 | MS.gene045704:CDS | 20.0% |
| ! | AAAGATTAATAGGAAAACAG+TGG | - | chr4.3:65258080-65258099 | MS.gene045704:intron | 25.0% |
| ! | CCATGAACATAATAAATTAC+AGG | + | chr4.3:65257619-65257638 | None:intergenic | 25.0% |
| ! | CCTGTAATTTATTATGTTCA+TGG | - | chr4.3:65257616-65257635 | MS.gene045704:intron | 25.0% |
| ! | GATTATATAAAACATCAGCT+GGG | + | chr4.3:65257926-65257945 | None:intergenic | 25.0% |
| ! | TTATATAATCCTTGACAGAT+TGG | - | chr4.3:65257936-65257955 | MS.gene045704:intron | 25.0% |
| !! | ACTGTTTTCCTATTAATCTT+TGG | + | chr4.3:65258081-65258100 | None:intergenic | 25.0% |
| !! | TAGTACTATGATAATGATGT+TGG | - | chr4.3:65256604-65256623 | MS.gene045704:CDS | 25.0% |
| !! | TGCTATAAATTTTTACAGGA+AGG | - | chr4.3:65257233-65257252 | MS.gene045704:intron | 25.0% |
| !! | TTGTTGATGGAAAAAAACAA+AGG | - | chr4.3:65256701-65256720 | MS.gene045704:CDS | 25.0% |
| AATTCAATAGCACTAGATGT+GGG | + | chr4.3:65257852-65257871 | None:intergenic | 30.0% | |
| ACATAATAAATTACAGGGAG+TGG | + | chr4.3:65257613-65257632 | None:intergenic | 30.0% | |
| ACATCTCTTACATACAAACT+TGG | + | chr4.3:65258634-65258653 | None:intergenic | 30.0% | |
| AGCGATATCACTTCATAATA+AGG | - | chr4.3:65256750-65256769 | MS.gene045704:CDS | 30.0% | |
| AGTTTGAAGGATTGAAATTG+TGG | - | chr4.3:65256905-65256924 | MS.gene045704:CDS | 30.0% | |
| ATAATCCAGTCCAAATTTCT+TGG | + | chr4.3:65257277-65257296 | None:intergenic | 30.0% | |
| ATCTGATATTATGGGTTTCT+GGG | - | chr4.3:65257112-65257131 | MS.gene045704:CDS | 30.0% | |
| ATGGATTTGTCCAAGAAATT+TGG | - | chr4.3:65257264-65257283 | MS.gene045704:intron | 30.0% | |
| GAAGCAACTATTCACAAAAA+AGG | + | chr4.3:65257895-65257914 | None:intergenic | 30.0% | |
| GGATTATATAAAACATCAGC+TGG | + | chr4.3:65257927-65257946 | None:intergenic | 30.0% | |
| GTAATTGGGGTTATGAATTT+GGG | - | chr4.3:65257337-65257356 | MS.gene045704:CDS | 30.0% | |
| TAGGATTACACAAAAGCTAA+AGG | - | chr4.3:65256493-65256512 | MS.gene045704:CDS | 30.0% | |
| TATACCCTAAAATTCCTTCT+GGG | - | chr4.3:65258396-65258415 | MS.gene045704:intron | 30.0% | |
| TATTTCTCTTTACCAGTCAT+TGG | - | chr4.3:65257479-65257498 | MS.gene045704:CDS | 30.0% | |
| TCAACATTAGTAGCATTCAA+AGG | + | chr4.3:65258273-65258292 | None:intergenic | 30.0% | |
| TGACTGTAAGCAATTTATGA+AGG | - | chr4.3:65258125-65258144 | MS.gene045704:intron | 30.0% | |
| TGAGAGAAAATCGTAAAGAT+CGG | + | chr4.3:65255737-65255756 | None:intergenic | 30.0% | |
| TGATGGAAAAAAACAAAGGA+TGG | - | chr4.3:65256705-65256724 | MS.gene045704:CDS | 30.0% | |
| TTGAACCAATTCCAACAAAA+AGG | + | chr4.3:65257541-65257560 | None:intergenic | 30.0% | |
| TTGAATTCAGGTAAGAGTAA+TGG | - | chr4.3:65257865-65257884 | MS.gene045704:intron | 30.0% | |
| ! | ATACTTTGACTGTTTGTTGA+TGG | - | chr4.3:65256688-65256707 | MS.gene045704:CDS | 30.0% |
| ! | ATGTGTTTAATTTACAAGCC+TGG | + | chr4.3:65258683-65258702 | None:intergenic | 30.0% |
| ! | TATGATAATGATGTTGGTGT+GGG | - | chr4.3:65256610-65256629 | MS.gene045704:CDS | 30.0% |
| ! | TTACATTTTGCTTCAGAGTT+TGG | - | chr4.3:65257190-65257209 | MS.gene045704:CDS | 30.0% |
| !!! | ATTATTTTGATGTACACTCC+TGG | - | chr4.3:65256111-65256130 | MS.gene045704:CDS | 30.0% |
| !!! | TTTCTATTTTTTTTTGGGGG+AGG | - | chr4.3:65256065-65256084 | MS.gene045704:CDS | 30.0% |
| AAAACATATACAGTAGAGCC+AGG | + | chr4.3:65256132-65256151 | None:intergenic | 35.0% | |
| AACTCCAAAGTTAACCACTA+TGG | + | chr4.3:65256451-65256470 | None:intergenic | 35.0% | |
| AATGGTACAGTTGAAGTTCA+AGG | - | chr4.3:65258426-65258445 | MS.gene045704:intron | 35.0% | |
| ACCATATCCTAGAAGTTTCA+CGG | + | chr4.3:65258358-65258377 | None:intergenic | 35.0% | |
| AGAGAAATAACAGACTGTAC+AGG | + | chr4.3:65257468-65257487 | None:intergenic | 35.0% | |
| ATACCCTAAAATTCCTTCTG+GGG | - | chr4.3:65258397-65258416 | MS.gene045704:intron | 35.0% | |
| ATCAGAAATCACTTGCTCTT+TGG | + | chr4.3:65258004-65258023 | None:intergenic | 35.0% | |
| ATGGTTGTATCATCAACTTG+AGG | - | chr4.3:65256989-65257008 | MS.gene045704:CDS | 35.0% | |
| CAAACCATAGTGGTTAACTT+TGG | - | chr4.3:65256444-65256463 | MS.gene045704:CDS | 35.0% | |
| CAAAGTTAACCACTATGGTT+TGG | + | chr4.3:65256446-65256465 | None:intergenic | 35.0% | |
| CATTCATGGTATGGTAATTG+GGG | - | chr4.3:65257324-65257343 | MS.gene045704:CDS | 35.0% | |
| CTCTTACATACAAACTTGGA+AGG | + | chr4.3:65258630-65258649 | None:intergenic | 35.0% | |
| CTTACTCTTAATGGAAGAGA+AGG | - | chr4.3:65257068-65257087 | MS.gene045704:CDS | 35.0% | |
| GAAACCCATAATATCAGATC+CGG | + | chr4.3:65257111-65257130 | None:intergenic | 35.0% | |
| GAAATCAGTTGCAAATGGAA+TGG | - | chr4.3:65257806-65257825 | MS.gene045704:intron | 35.0% | |
| GAATTCAATAGCACTAGATG+TGG | + | chr4.3:65257853-65257872 | None:intergenic | 35.0% | |
| GAGAAATAACAGACTGTACA+GGG | + | chr4.3:65257467-65257486 | None:intergenic | 35.0% | |
| GATCTGATATTATGGGTTTC+TGG | - | chr4.3:65257111-65257130 | MS.gene045704:CDS | 35.0% | |
| GATTGGGATAAGTAGTTTGA+AGG | - | chr4.3:65256892-65256911 | MS.gene045704:CDS | 35.0% | |
| GCATTCATGGTATGGTAATT+GGG | - | chr4.3:65257323-65257342 | MS.gene045704:CDS | 35.0% | |
| GGTAATTGGGGTTATGAATT+TGG | - | chr4.3:65257336-65257355 | MS.gene045704:CDS | 35.0% | |
| GTATACCCTAAAATTCCTTC+TGG | - | chr4.3:65258395-65258414 | MS.gene045704:intron | 35.0% | |
| GTTACCTTGCTTCAGATAAT+TGG | + | chr4.3:65256835-65256854 | None:intergenic | 35.0% | |
| GTTGTACATGCTAATGGTTA+TGG | - | chr4.3:65257038-65257057 | MS.gene045704:CDS | 35.0% | |
| TACTCTTGACATTGTTGAAG+AGG | - | chr4.3:65255948-65255967 | MS.gene045704:CDS | 35.0% | |
| TGACAAGGCAAACTCTTAAA+GGG | - | chr4.3:65257721-65257740 | MS.gene045704:CDS | 35.0% | |
| TTGAACTTCAACTGTACCAT+TGG | + | chr4.3:65258427-65258446 | None:intergenic | 35.0% | |
| TTTGTCCAAGAAATTTGGAC+TGG | - | chr4.3:65257269-65257288 | MS.gene045704:intron | 35.0% | |
| ! | AGATCTCTTCTCCTTTTTGT+TGG | - | chr4.3:65257527-65257546 | MS.gene045704:intron | 35.0% |
| ! | CATCTAGTGCTATTGAATTC+AGG | - | chr4.3:65257853-65257872 | MS.gene045704:intron | 35.0% |
| ! | CTATGATAATGATGTTGGTG+TGG | - | chr4.3:65256609-65256628 | MS.gene045704:CDS | 35.0% |
| ! | CTTCACACTGTTGTTTGATT+GGG | - | chr4.3:65256876-65256895 | MS.gene045704:CDS | 35.0% |
| ! | CTTCTCCTTTTTGTTGGAAT+TGG | - | chr4.3:65257533-65257552 | MS.gene045704:intron | 35.0% |
| ! | TTCAAAATTTTCGTAAGCCC+AGG | - | chr4.3:65257556-65257575 | MS.gene045704:intron | 35.0% |
| ! | TTGTGGTTTGATATTTCTGC+AGG | - | chr4.3:65256922-65256941 | MS.gene045704:CDS | 35.0% |
| !! | ATATTATGGGTTTCTGGGAT+AGG | - | chr4.3:65257117-65257136 | MS.gene045704:CDS | 35.0% |
| AAAGGCAGCACAATTAACTC+AGG | + | chr4.3:65258255-65258274 | None:intergenic | 40.0% | |
| AACAACACACATCTTCTGCA+TGG | - | chr4.3:65257014-65257033 | MS.gene045704:CDS | 40.0% | |
| ACTCTTAATGGAAGAGAAGG+TGG | - | chr4.3:65257071-65257090 | MS.gene045704:CDS | 40.0% | |
| AGGTCTTTGATATGCTGCAT+TGG | + | chr4.3:65256789-65256808 | None:intergenic | 40.0% | |
| ATGTGTTAACTCAATCCGTG+TGG | - | chr4.3:65258650-65258669 | MS.gene045704:CDS | 40.0% | |
| ATGTTAGCATGTGATACCTG+TGG | - | chr4.3:65258555-65258574 | MS.gene045704:CDS | 40.0% | |
| CAAAATCGAGCAAATGACCT+CGG | - | chr4.3:65258152-65258171 | MS.gene045704:intron | 40.0% | |
| CAAACAACAGTGTGAAGGTA+AGG | + | chr4.3:65256873-65256892 | None:intergenic | 40.0% | |
| CAAAGACCTTGCACTAAATG+TGG | - | chr4.3:65256800-65256819 | MS.gene045704:CDS | 40.0% | |
| CAAGGGAAATCAGTTGCAAA+TGG | - | chr4.3:65257801-65257820 | MS.gene045704:intron | 40.0% | |
| CACATATTGCAGAGATGAAG+CGG | - | chr4.3:65258698-65258717 | MS.gene045704:CDS | 40.0% | |
| CACCAGTGACTTCATTCAAA+AGG | + | chr4.3:65258296-65258315 | None:intergenic | 40.0% | |
| CATTTCTGCTGATGATCTTG+AGG | - | chr4.3:65256965-65256984 | MS.gene045704:CDS | 40.0% | |
| CCAATCAAACAACAGTGTGA+AGG | + | chr4.3:65256878-65256897 | None:intergenic | 40.0% | |
| CTCTCCGGATCTGATATTAT+GGG | - | chr4.3:65257104-65257123 | MS.gene045704:CDS | 40.0% | |
| CTTACAGTCAAGAAGCTTTC+TGG | + | chr4.3:65258115-65258134 | None:intergenic | 40.0% | |
| CTTGCTTCAGATAATTGGAG+AGG | + | chr4.3:65256830-65256849 | None:intergenic | 40.0% | |
| GAAATCACTTGCTCTTTGGA+AGG | + | chr4.3:65258000-65258019 | None:intergenic | 40.0% | |
| GAATCGTTGAGTCAGATTCT+CGG | - | chr4.3:65256026-65256045 | MS.gene045704:CDS | 40.0% | |
| GACAAGGCAAACTCTTAAAG+GGG | - | chr4.3:65257722-65257741 | MS.gene045704:CDS | 40.0% | |
| GCAATGGAGCTTAATCCATT+AGG | + | chr4.3:65257970-65257989 | None:intergenic | 40.0% | |
| GGCATTCATGGTATGGTAAT+TGG | - | chr4.3:65257322-65257341 | MS.gene045704:CDS | 40.0% | |
| GGTCACTTGCTTACTCTTAA+TGG | - | chr4.3:65257059-65257078 | MS.gene045704:CDS | 40.0% | |
| GTGACAAGGCAAACTCTTAA+AGG | - | chr4.3:65257720-65257739 | MS.gene045704:CDS | 40.0% | |
| TACCGAAGATGCATACAAGA+TGG | - | chr4.3:65257377-65257396 | MS.gene045704:CDS | 40.0% | |
| TCTCTCCGGATCTGATATTA+TGG | - | chr4.3:65257103-65257122 | MS.gene045704:CDS | 40.0% | |
| TGACTGCATTTGTGGTACTA+AGG | - | chr4.3:65258515-65258534 | MS.gene045704:CDS | 40.0% | |
| TGTGATCAATGTCGTGTTGT+TGG | - | chr4.3:65255997-65256016 | MS.gene045704:CDS | 40.0% | |
| TGTGGTACTAAGGATGATGA+TGG | - | chr4.3:65258525-65258544 | MS.gene045704:CDS | 40.0% | |
| TGTGTTAACTCAATCCGTGT+GGG | - | chr4.3:65258651-65258670 | MS.gene045704:CDS | 40.0% | |
| TTACAGGAAGGTTACTGTGA+TGG | - | chr4.3:65257245-65257264 | MS.gene045704:intron | 40.0% | |
| TTAGGGTATACACACGATCT+CGG | + | chr4.3:65258386-65258405 | None:intergenic | 40.0% | |
| TTGCATGATCAGACAGAAAC+CGG | + | chr4.3:65255825-65255844 | None:intergenic | 40.0% | |
| TTGTTGAAGAGGATGTTACG+AGG | - | chr4.3:65255959-65255978 | MS.gene045704:CDS | 40.0% | |
| TTGTTTCGTGTTGGAGAAGT+TGG | - | chr4.3:65255895-65255914 | MS.gene045704:CDS | 40.0% | |
| TTTGTAGCCGTGAAACTTCT+AGG | - | chr4.3:65258348-65258367 | MS.gene045704:intron | 40.0% | |
| ! | CCTTCACACTGTTGTTTGAT+TGG | - | chr4.3:65256875-65256894 | MS.gene045704:CDS | 40.0% |
| ! | CTCTCCAATTATCTGAAGCA+AGG | - | chr4.3:65256828-65256847 | MS.gene045704:CDS | 40.0% |
| ! | GACCTTTTGAATGAAGTCAC+TGG | - | chr4.3:65258291-65258310 | MS.gene045704:intron | 40.0% |
| ! | TGACCCCAGAAGGAATTTTA+GGG | + | chr4.3:65258403-65258422 | None:intergenic | 40.0% |
| ! | TTGACCCCAGAAGGAATTTT+AGG | + | chr4.3:65258404-65258423 | None:intergenic | 40.0% |
| ! | TTTGTGCTGCTATGTCTGTT+AGG | - | chr4.3:65257141-65257160 | MS.gene045704:CDS | 40.0% |
| !! | CATGGTGTTGTACATGCTAA+TGG | - | chr4.3:65257032-65257051 | MS.gene045704:CDS | 40.0% |
| !! | CTAAGGATGATGATGGAGAA+AGG | - | chr4.3:65258532-65258551 | MS.gene045704:CDS | 40.0% |
| !! | CTTCTTTTGACTCGCTTAGT+GGG | + | chr4.3:65255706-65255725 | None:intergenic | 40.0% |
| !! | GGTTGGTGGATATGGAATTA+TGG | - | chr4.3:65256649-65256668 | MS.gene045704:CDS | 40.0% |
| !! | TCTTCTTTTGACTCGCTTAG+TGG | + | chr4.3:65255707-65255726 | None:intergenic | 40.0% |
| !!! | GTGCTAAGCCATTTTTAGCT+GGG | + | chr4.3:65258458-65258477 | None:intergenic | 40.0% |
| AAAGTCGGACCAAACCATAG+TGG | - | chr4.3:65256434-65256453 | MS.gene045704:CDS | 45.0% | |
| ACAGACTGTACAGGGTTATG+AGG | + | chr4.3:65257459-65257478 | None:intergenic | 45.0% | |
| ACTGTCAATTCCAGCACATC+TGG | + | chr4.3:65258595-65258614 | None:intergenic | 45.0% | |
| AGGTGATGTTTCGTCTGGTT+TGG | - | chr4.3:65255924-65255943 | MS.gene045704:CDS | 45.0% | |
| AGTTTGCCTTGTCACCCATT+TGG | + | chr4.3:65257715-65257734 | None:intergenic | 45.0% | |
| ATATTGCAGAGATGAAGCGG+TGG | - | chr4.3:65258701-65258720 | MS.gene045704:CDS | 45.0% | |
| ATCAACGACGGAAAAAGCTC+AGG | + | chr4.3:65255862-65255881 | None:intergenic | 45.0% | |
| CAAACTCTTAAAGGGGCAGT+GGG | - | chr4.3:65257729-65257748 | MS.gene045704:intron | 45.0% | |
| CACCAGATCTTAAGAGCTGA+AGG | + | chr4.3:65258183-65258202 | None:intergenic | 45.0% | |
| CAGAAATATCTCCGGTGGTT+GGG | + | chr4.3:65255762-65255781 | None:intergenic | 45.0% | |
| CGAAGATGCATACAAGATGG+CGG | - | chr4.3:65257380-65257399 | MS.gene045704:CDS | 45.0% | |
| CGCCATCTTGTATGCATCTT+CGG | + | chr4.3:65257382-65257401 | None:intergenic | 45.0% | |
| CTGCTGATGATCTTGAGGAA+TGG | - | chr4.3:65256970-65256989 | MS.gene045704:CDS | 45.0% | |
| CTGGAACGATAATGAGGACA+GGG | + | chr4.3:65257427-65257446 | None:intergenic | 45.0% | |
| CTTCTGTTCCTCTCTCCATT+CGG | + | chr4.3:65258485-65258504 | None:intergenic | 45.0% | |
| GACGAGAAATGATGTCGAAG+AGG | - | chr4.3:65257638-65257657 | MS.gene045704:CDS | 45.0% | |
| GAGAGGAACAGAAGAATGGA+AGG | - | chr4.3:65258491-65258510 | MS.gene045704:CDS | 45.0% | |
| GAGTCAGATTCTCGGTTCTT+AGG | - | chr4.3:65256034-65256053 | MS.gene045704:CDS | 45.0% | |
| GATCATGTGATGTGGTTGGT+TGG | - | chr4.3:65256632-65256651 | MS.gene045704:CDS | 45.0% | |
| GGAGAATGCCCAGCTAAAAA+TGG | - | chr4.3:65258447-65258466 | MS.gene045704:intron | 45.0% | |
| GGAGTTCCACATTTAGTGCA+AGG | + | chr4.3:65256809-65256828 | None:intergenic | 45.0% | |
| GGTTTCTGTCTGATCATGCA+AGG | - | chr4.3:65255824-65255843 | MS.gene045704:CDS | 45.0% | |
| GTTCAGTTTCAGCCAATGAC+TGG | + | chr4.3:65257494-65257513 | None:intergenic | 45.0% | |
| TAGGGTATACACACGATCTC+GGG | + | chr4.3:65258385-65258404 | None:intergenic | 45.0% | |
| TCATTATCGTTCCAGGATCG+AGG | - | chr4.3:65257432-65257451 | MS.gene045704:CDS | 45.0% | |
| TCGATCCTGGAACGATAATG+AGG | + | chr4.3:65257433-65257452 | None:intergenic | 45.0% | |
| TCGGTCTTAAGCACTTGCAA+GGG | - | chr4.3:65257784-65257803 | MS.gene045704:intron | 45.0% | |
| TGATATCGCTTTCGACACAC+AGG | + | chr4.3:65256740-65256759 | None:intergenic | 45.0% | |
| TGCATCAAGTGCCTGTAATG+AGG | - | chr4.3:65257689-65257708 | MS.gene045704:CDS | 45.0% | |
| TGCCTGTAATGAGGCCAAAT+GGG | - | chr4.3:65257698-65257717 | MS.gene045704:CDS | 45.0% | |
| TGCCTTCAGCTCTTAAGATC+TGG | - | chr4.3:65258178-65258197 | MS.gene045704:intron | 45.0% | |
| TGCTTCATGCAATTGCCAGA+GGG | - | chr4.3:65257301-65257320 | MS.gene045704:intron | 45.0% | |
| TGGAACGATAATGAGGACAG+GGG | + | chr4.3:65257426-65257445 | None:intergenic | 45.0% | |
| TGGAAGGTTGACTGCATTTG+TGG | - | chr4.3:65258507-65258526 | MS.gene045704:CDS | 45.0% | |
| TGGAGAGAGGAACAGAAGAA+TGG | - | chr4.3:65258487-65258506 | MS.gene045704:CDS | 45.0% | |
| TTCGGTCTTAAGCACTTGCA+AGG | - | chr4.3:65257783-65257802 | MS.gene045704:intron | 45.0% | |
| TTGCTTCATGCAATTGCCAG+AGG | - | chr4.3:65257300-65257319 | MS.gene045704:intron | 45.0% | |
| TTTCTCTCATTCCCAACCAC+CGG | - | chr4.3:65255748-65255767 | MS.gene045704:CDS | 45.0% | |
| ! | AGATTGGCTCATGTGCCTAA+TGG | - | chr4.3:65257952-65257971 | MS.gene045704:intron | 45.0% |
| ! | ATGGGTGGTCTTCTTTAGGA+TGG | + | chr4.3:65258224-65258243 | None:intergenic | 45.0% |
| ! | TCACTTGCTCTTTGGAAGGA+TGG | + | chr4.3:65257996-65258015 | None:intergenic | 45.0% |
| ! | TGGCAGATCTTGTTTCGTGT+TGG | - | chr4.3:65255886-65255905 | MS.gene045704:CDS | 45.0% |
| ! | TGGGGTTATGAATTTGGGAC+TGG | - | chr4.3:65257342-65257361 | MS.gene045704:CDS | 45.0% |
| ! | TTTGGAAGGATGGCTTGCAA+TGG | + | chr4.3:65257986-65258005 | None:intergenic | 45.0% |
| !! | ATGTGGTTGGTTGGTGGATA+TGG | - | chr4.3:65256641-65256660 | MS.gene045704:CDS | 45.0% |
| !! | CTGGAATTGACAGTGCTGAT+GGG | - | chr4.3:65258601-65258620 | MS.gene045704:CDS | 45.0% |
| !! | GCCGTGAAACTTCTAGGATA+TGG | - | chr4.3:65258354-65258373 | MS.gene045704:intron | 45.0% |
| !!! | CGTGCTAAGCCATTTTTAGC+TGG | + | chr4.3:65258459-65258478 | None:intergenic | 45.0% |
| !!! | TTTTTCCGTCGTTGATGACG+TGG | - | chr4.3:65255866-65255885 | MS.gene045704:CDS | 45.0% |
| !!! | TTTATTTTCTATTTTTTTTT+GGG | - | chr4.3:65256060-65256079 | MS.gene045704:CDS | 5.0% |
| !!! | TTTTATTTTCTATTTTTTTT+TGG | - | chr4.3:65256059-65256078 | MS.gene045704:CDS | 5.0% |
| AACGACGGAAAAAGCTCAGG+AGG | + | chr4.3:65255859-65255878 | None:intergenic | 50.0% | |
| AAGAGGATGTTACGAGGTCG+AGG | - | chr4.3:65255965-65255984 | MS.gene045704:CDS | 50.0% | |
| AAGCCTGGTTATCTCCCACA+CGG | + | chr4.3:65258668-65258687 | None:intergenic | 50.0% | |
| AATCCGTGTGGGAGATAACC+AGG | - | chr4.3:65258662-65258681 | MS.gene045704:CDS | 50.0% | |
| ACCATACCATGAATGCCCTC+TGG | + | chr4.3:65257319-65257338 | None:intergenic | 50.0% | |
| ACCGAAGTCAAGAAGCTCTG+GGG | + | chr4.3:65257769-65257788 | None:intergenic | 50.0% | |
| AGACCGAAGTCAAGAAGCTC+TGG | + | chr4.3:65257771-65257790 | None:intergenic | 50.0% | |
| AGCACAATTAACTCAGGCGG+TGG | + | chr4.3:65258249-65258268 | None:intergenic | 50.0% | |
| AGCAGCGGCAGAAATATCTC+CGG | + | chr4.3:65255770-65255789 | None:intergenic | 50.0% | |
| ATCTGCCACGTCATCAACGA+CGG | + | chr4.3:65255874-65255893 | None:intergenic | 50.0% | |
| ATGAGGCCAAATGGGTGACA+AGG | - | chr4.3:65257706-65257725 | MS.gene045704:CDS | 50.0% | |
| ATTAACTCAGGCGGTGGTGA+TGG | + | chr4.3:65258243-65258262 | None:intergenic | 50.0% | |
| CACCCATTTGGCCTCATTAC+AGG | + | chr4.3:65257703-65257722 | None:intergenic | 50.0% | |
| CATGTGATACCTGTGGTGTC+TGG | - | chr4.3:65258562-65258581 | MS.gene045704:CDS | 50.0% | |
| CCTGGAACGATAATGAGGAC+AGG | + | chr4.3:65257428-65257447 | None:intergenic | 50.0% | |
| CCTGTCCTCATTATCGTTCC+AGG | - | chr4.3:65257425-65257444 | MS.gene045704:CDS | 50.0% | |
| GAAACCGGTAAACACCGTTC+CGG | + | chr4.3:65255810-65255829 | None:intergenic | 50.0% | |
| GACCGAAGTCAAGAAGCTCT+GGG | + | chr4.3:65257770-65257789 | None:intergenic | 50.0% | |
| GATGGAGGTGATGTTTCGTC+TGG | - | chr4.3:65255919-65255938 | MS.gene045704:CDS | 50.0% | |
| GCAAACTCTTAAAGGGGCAG+TGG | - | chr4.3:65257728-65257747 | MS.gene045704:intron | 50.0% | |
| GCACATGAGCCAATCTGTCA+AGG | + | chr4.3:65257948-65257967 | None:intergenic | 50.0% | |
| GCAGAAATATCTCCGGTGGT+TGG | + | chr4.3:65255763-65255782 | None:intergenic | 50.0% | |
| GGCAGCACAATTAACTCAGG+CGG | + | chr4.3:65258252-65258271 | None:intergenic | 50.0% | |
| GTGCCTGTAATGAGGCCAAA+TGG | - | chr4.3:65257697-65257716 | MS.gene045704:CDS | 50.0% | |
| GTGGGATCATGTGATGTGGT+TGG | - | chr4.3:65256628-65256647 | MS.gene045704:CDS | 50.0% | |
| TCCCCAGAGCTTCTTGACTT+CGG | - | chr4.3:65257765-65257784 | MS.gene045704:intron | 50.0% | |
| TGGCTTAGCACGATTCCGAA+TGG | - | chr4.3:65258467-65258486 | MS.gene045704:CDS | 50.0% | |
| TGGTGTGGGATCATGTGATG+TGG | - | chr4.3:65256624-65256643 | MS.gene045704:CDS | 50.0% | |
| TTAACTCAGGCGGTGGTGAT+GGG | + | chr4.3:65258242-65258261 | None:intergenic | 50.0% | |
| TTAGCAGTCTCTGCACTCCT+GGG | + | chr4.3:65257576-65257595 | None:intergenic | 50.0% | |
| TTTAGCAGTCTCTGCACTCC+TGG | + | chr4.3:65257577-65257596 | None:intergenic | 50.0% | |
| ! | CATGTGATGTGGTTGGTTGG+TGG | - | chr4.3:65256635-65256654 | MS.gene045704:CDS | 50.0% |
| ! | GCTGGAATTGACAGTGCTGA+TGG | - | chr4.3:65258600-65258619 | MS.gene045704:CDS | 50.0% |
| ! | TAATGAGGACAGGGGCATGT+TGG | + | chr4.3:65257418-65257437 | None:intergenic | 50.0% |
| ! | TACCATTGGTTGACCCCAGA+AGG | + | chr4.3:65258413-65258432 | None:intergenic | 50.0% |
| !! | CAATTGCCAGAGGGCATTCA+TGG | - | chr4.3:65257310-65257329 | MS.gene045704:CDS | 50.0% |
| !! | CGTGTTGGAGAAGTTGGTGA+TGG | - | chr4.3:65255901-65255920 | MS.gene045704:CDS | 50.0% |
| !! | GGTGATGGGTGGTCTTCTTT+AGG | + | chr4.3:65258228-65258247 | None:intergenic | 50.0% |
| !! | GTTGGAGAAGTTGGTGATGG+AGG | - | chr4.3:65255904-65255923 | MS.gene045704:CDS | 50.0% |
| !! | TTCCTTCTGGGGTCAACCAA+TGG | - | chr4.3:65258408-65258427 | MS.gene045704:intron | 50.0% |
| AGCGGCAGAAATATCTCCGG+TGG | + | chr4.3:65255767-65255786 | None:intergenic | 55.0% | |
| CGGTAAACACCGTTCCGGAA+CGG | + | chr4.3:65255805-65255824 | None:intergenic | 55.0% | |
| CGTTCCGGAACGGTGTTTAC+CGG | - | chr4.3:65255803-65255822 | MS.gene045704:CDS | 55.0% | |
| CTCTTAAAGGGGCAGTGGGT+AGG | - | chr4.3:65257733-65257752 | MS.gene045704:intron | 55.0% | |
| GCACGATTCCGAATGGAGAG+AGG | - | chr4.3:65258474-65258493 | MS.gene045704:CDS | 55.0% | |
| GGTTATGAGGTCCTCGATCC+TGG | + | chr4.3:65257446-65257465 | None:intergenic | 55.0% | |
| TGGCTGCATTCCAGATGTGC+TGG | - | chr4.3:65258582-65258601 | MS.gene045704:CDS | 55.0% | |
| ! | GGTGCAGCAGGCTTTGATGA+AGG | - | chr4.3:65257659-65257678 | MS.gene045704:CDS | 55.0% |
| ! | TGATGTCGAAGAGGTGCAGC+AGG | - | chr4.3:65257647-65257666 | MS.gene045704:CDS | 55.0% |
| !! | GCCAGAGGGCATTCATGGTA+TGG | - | chr4.3:65257315-65257334 | MS.gene045704:CDS | 55.0% |
| AACACCGTTCCGGAACGGCA+CGG | + | chr4.3:65255800-65255819 | None:intergenic | 60.0% | |
| AAGAGCTGAAGGCAGCTCCG+AGG | + | chr4.3:65258172-65258191 | None:intergenic | 60.0% | |
| GGAATGCAGCCAGACACCAC+AGG | + | chr4.3:65258574-65258593 | None:intergenic | 60.0% | |
| GGGGCAGTGGGTAGGCGTAT+TGG | - | chr4.3:65257741-65257760 | MS.gene045704:intron | 65.0% | |
| GGTGGCTCGTCGCTTCTCTC+CGG | - | chr4.3:65257089-65257108 | MS.gene045704:CDS | 65.0% | |
| !! | ACTCAGGCGGTGGTGATGGG+TGG | + | chr4.3:65258239-65258258 | None:intergenic | 65.0% |
| ACCGTTCCGGAACGGCACGG+CGG | + | chr4.3:65255797-65255816 | None:intergenic | 70.0% | |
| ! | CTTCTGCCGCCGTGCCGTTC+CGG | - | chr4.3:65255788-65255807 | MS.gene045704:CDS | 70.0% |
| CGGCACGGCGGCAGAAGCAG+CGG | + | chr4.3:65255785-65255804 | None:intergenic | 75.0% | |
| ! | GCCGCCGTGCCGTTCCGGAA+CGG | - | chr4.3:65255793-65255812 | MS.gene045704:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 65255685 | 65258782 | 65255685 | ID=MS.gene045704 |
| chr4.3 | mRNA | 65255685 | 65258782 | 65255685 | ID=MS.gene045704.t1;Parent=MS.gene045704 |
| chr4.3 | exon | 65258449 | 65258782 | 65258449 | ID=MS.gene045704.t1.exon1;Parent=MS.gene045704.t1 |
| chr4.3 | CDS | 65258449 | 65258782 | 65258449 | ID=cds.MS.gene045704.t1;Parent=MS.gene045704.t1 |
| chr4.3 | exon | 65257618 | 65257744 | 65257618 | ID=MS.gene045704.t1.exon2;Parent=MS.gene045704.t1 |
| chr4.3 | CDS | 65257618 | 65257744 | 65257618 | ID=cds.MS.gene045704.t1;Parent=MS.gene045704.t1 |
| chr4.3 | exon | 65257305 | 65257523 | 65257305 | ID=MS.gene045704.t1.exon3;Parent=MS.gene045704.t1 |
| chr4.3 | CDS | 65257305 | 65257523 | 65257305 | ID=cds.MS.gene045704.t1;Parent=MS.gene045704.t1 |
| chr4.3 | exon | 65256593 | 65257216 | 65256593 | ID=MS.gene045704.t1.exon4;Parent=MS.gene045704.t1 |
| chr4.3 | CDS | 65256593 | 65257216 | 65256593 | ID=cds.MS.gene045704.t1;Parent=MS.gene045704.t1 |
| chr4.3 | exon | 65255685 | 65256513 | 65255685 | ID=MS.gene045704.t1.exon5;Parent=MS.gene045704.t1 |
| chr4.3 | CDS | 65255685 | 65256513 | 65255685 | ID=cds.MS.gene045704.t1;Parent=MS.gene045704.t1 |
| Gene Sequence |
| Protein sequence |
