Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene045747.t1 | XP_003595715.2 | 84.6 | 221 | 24 | 2 | 1 | 220 | 1 | 212 | 6.50E-65 | 257.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene045747.t1 | Q8LDR0 | 94.2 | 52 | 3 | 0 | 36 | 87 | 51 | 102 | 4.3e-25 | 116.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene045747.t1 | A0A396JAA5 | 84.6 | 221 | 24 | 2 | 1 | 220 | 1 | 212 | 4.7e-65 | 257.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene045747.t1 | TF | C2C2-Dof |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene045747.t1 | MTR_2g059540 | 82.791 | 215 | 27 | 2 | 7 | 220 | 1 | 206 | 9.72e-109 | 311 |
MS.gene045747.t1 | MTR_2g096740 | 44.079 | 152 | 73 | 3 | 20 | 171 | 46 | 185 | 2.45e-34 | 124 |
MS.gene045747.t1 | MTR_2g096740 | 44.079 | 152 | 73 | 3 | 20 | 171 | 61 | 200 | 2.68e-34 | 124 |
MS.gene045747.t1 | MTR_4g109980 | 53.906 | 128 | 59 | 0 | 34 | 161 | 38 | 165 | 1.26e-32 | 120 |
MS.gene045747.t1 | MTR_7g024670 | 79.688 | 64 | 13 | 0 | 35 | 98 | 76 | 139 | 4.10e-31 | 117 |
MS.gene045747.t1 | MTR_8g015840 | 73.438 | 64 | 17 | 0 | 32 | 95 | 16 | 79 | 1.74e-30 | 112 |
MS.gene045747.t1 | MTR_4g063780 | 76.190 | 63 | 15 | 0 | 35 | 97 | 74 | 136 | 2.28e-30 | 114 |
MS.gene045747.t1 | MTR_4g022370 | 43.165 | 139 | 66 | 2 | 8 | 146 | 54 | 179 | 2.41e-30 | 115 |
MS.gene045747.t1 | MTR_8g479350 | 67.123 | 73 | 23 | 1 | 36 | 108 | 68 | 139 | 6.78e-30 | 113 |
MS.gene045747.t1 | MTR_3g091820 | 75.410 | 61 | 15 | 0 | 31 | 91 | 38 | 98 | 8.12e-30 | 112 |
MS.gene045747.t1 | MTR_7g059400 | 56.522 | 92 | 25 | 1 | 37 | 113 | 77 | 168 | 1.00e-29 | 113 |
MS.gene045747.t1 | MTR_1g077600 | 68.254 | 63 | 20 | 0 | 30 | 92 | 37 | 99 | 1.02e-29 | 111 |
MS.gene045747.t1 | MTR_1g077600 | 68.254 | 63 | 20 | 0 | 30 | 92 | 37 | 99 | 1.22e-29 | 112 |
MS.gene045747.t1 | MTR_8g068210 | 65.278 | 72 | 25 | 0 | 35 | 106 | 31 | 102 | 3.13e-29 | 112 |
MS.gene045747.t1 | MTR_7g010950 | 57.143 | 91 | 36 | 2 | 17 | 105 | 114 | 203 | 4.04e-29 | 113 |
MS.gene045747.t1 | MTR_8g079060 | 62.667 | 75 | 28 | 0 | 36 | 110 | 29 | 103 | 7.27e-29 | 108 |
MS.gene045747.t1 | MTR_4g088580 | 52.679 | 112 | 44 | 2 | 6 | 115 | 32 | 136 | 1.22e-28 | 110 |
MS.gene045747.t1 | MTR_2g014060 | 74.138 | 58 | 15 | 0 | 30 | 87 | 19 | 76 | 1.25e-28 | 110 |
MS.gene045747.t1 | MTR_8g027295 | 59.524 | 84 | 31 | 2 | 33 | 114 | 21 | 103 | 1.54e-28 | 108 |
MS.gene045747.t1 | MTR_4g461080 | 83.333 | 54 | 9 | 0 | 34 | 87 | 27 | 80 | 2.19e-28 | 108 |
MS.gene045747.t1 | MTR_8g044220 | 50.000 | 90 | 44 | 1 | 19 | 108 | 101 | 189 | 2.64e-28 | 110 |
MS.gene045747.t1 | MTR_3g090430 | 68.657 | 67 | 21 | 0 | 31 | 97 | 46 | 112 | 6.42e-28 | 108 |
MS.gene045747.t1 | MTR_2g093220 | 62.667 | 75 | 21 | 1 | 16 | 90 | 27 | 94 | 7.13e-28 | 107 |
MS.gene045747.t1 | MTR_5g031440 | 82.353 | 51 | 9 | 0 | 36 | 86 | 43 | 93 | 1.13e-27 | 107 |
MS.gene045747.t1 | MTR_7g086780 | 51.087 | 92 | 44 | 1 | 17 | 108 | 80 | 170 | 1.30e-27 | 108 |
MS.gene045747.t1 | MTR_2g014170 | 86.000 | 50 | 7 | 0 | 35 | 84 | 44 | 93 | 2.15e-27 | 106 |
MS.gene045747.t1 | MTR_6g012450 | 57.500 | 80 | 33 | 1 | 22 | 101 | 122 | 200 | 2.76e-27 | 108 |
MS.gene045747.t1 | MTR_3g077750 | 58.140 | 86 | 33 | 1 | 1 | 86 | 29 | 111 | 5.06e-27 | 105 |
MS.gene045747.t1 | MTR_2g013370 | 60.870 | 69 | 27 | 0 | 15 | 83 | 25 | 93 | 8.87e-27 | 103 |
MS.gene045747.t1 | MTR_1g056810 | 77.358 | 53 | 12 | 0 | 38 | 90 | 14 | 66 | 1.48e-25 | 101 |
MS.gene045747.t1 | MTR_2g016030 | 56.757 | 74 | 29 | 1 | 36 | 106 | 47 | 120 | 1.53e-25 | 97.8 |
MS.gene045747.t1 | MTR_3g435480 | 60.870 | 69 | 27 | 0 | 36 | 104 | 136 | 204 | 1.79e-25 | 103 |
MS.gene045747.t1 | MTR_4g082060 | 68.333 | 60 | 18 | 1 | 36 | 95 | 122 | 180 | 2.58e-25 | 102 |
MS.gene045747.t1 | MTR_6g027450 | 73.077 | 52 | 14 | 0 | 36 | 87 | 89 | 140 | 3.79e-25 | 100 |
MS.gene045747.t1 | MTR_4g089095 | 78.182 | 55 | 10 | 1 | 36 | 90 | 50 | 102 | 3.91e-25 | 100 |
MS.gene045747.t1 | MTR_4g089095 | 78.182 | 55 | 10 | 1 | 36 | 90 | 16 | 68 | 4.32e-25 | 99.4 |
MS.gene045747.t1 | MTR_6g027460 | 50.000 | 96 | 43 | 3 | 36 | 128 | 96 | 189 | 2.89e-24 | 99.0 |
MS.gene045747.t1 | MTR_5g041420 | 53.425 | 73 | 33 | 1 | 18 | 90 | 120 | 191 | 1.11e-23 | 96.7 |
MS.gene045747.t1 | MTR_5g041530 | 67.797 | 59 | 18 | 1 | 36 | 94 | 140 | 197 | 3.87e-23 | 95.9 |
MS.gene045747.t1 | MTR_5g041380 | 61.905 | 63 | 24 | 0 | 36 | 98 | 127 | 189 | 5.52e-23 | 95.5 |
MS.gene045747.t1 | MTR_5g041400 | 65.079 | 63 | 21 | 1 | 36 | 98 | 119 | 180 | 1.17e-22 | 94.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene045747.t1 | AT5G60850 | 71.429 | 91 | 23 | 2 | 18 | 108 | 34 | 121 | 1.42e-40 | 140 |
MS.gene045747.t1 | AT1G51700 | 71.053 | 76 | 22 | 0 | 23 | 98 | 20 | 95 | 1.72e-35 | 124 |
MS.gene045747.t1 | AT3G55370 | 71.642 | 67 | 19 | 0 | 35 | 101 | 75 | 141 | 5.81e-31 | 116 |
MS.gene045747.t1 | AT1G07640 | 71.014 | 69 | 20 | 0 | 22 | 90 | 7 | 75 | 7.45e-31 | 114 |
MS.gene045747.t1 | AT3G55370 | 71.642 | 67 | 19 | 0 | 35 | 101 | 75 | 141 | 7.52e-31 | 116 |
MS.gene045747.t1 | AT5G65590 | 69.014 | 71 | 22 | 0 | 31 | 101 | 36 | 106 | 8.81e-31 | 115 |
MS.gene045747.t1 | AT5G60200 | 62.667 | 75 | 24 | 1 | 35 | 109 | 54 | 124 | 1.00e-30 | 114 |
MS.gene045747.t1 | AT3G55370 | 71.642 | 67 | 19 | 0 | 35 | 101 | 120 | 186 | 1.04e-30 | 116 |
MS.gene045747.t1 | AT3G21270 | 90.385 | 52 | 5 | 0 | 36 | 87 | 29 | 80 | 1.05e-30 | 112 |
MS.gene045747.t1 | AT1G07640 | 85.455 | 55 | 8 | 0 | 36 | 90 | 77 | 131 | 1.52e-30 | 115 |
MS.gene045747.t1 | AT1G07640 | 85.455 | 55 | 8 | 0 | 36 | 90 | 85 | 139 | 1.98e-30 | 115 |
MS.gene045747.t1 | AT3G45610 | 62.338 | 77 | 24 | 1 | 33 | 109 | 37 | 108 | 2.53e-30 | 112 |
MS.gene045747.t1 | AT2G28810 | 84.906 | 53 | 8 | 0 | 35 | 87 | 76 | 128 | 1.14e-29 | 112 |
MS.gene045747.t1 | AT2G37590 | 58.974 | 78 | 32 | 0 | 15 | 92 | 68 | 145 | 1.46e-29 | 112 |
MS.gene045747.t1 | AT2G28810 | 84.906 | 53 | 8 | 0 | 35 | 87 | 93 | 145 | 1.74e-29 | 112 |
MS.gene045747.t1 | AT4G38000 | 78.571 | 56 | 12 | 0 | 35 | 90 | 40 | 95 | 1.79e-29 | 110 |
MS.gene045747.t1 | AT3G50410 | 63.636 | 77 | 25 | 1 | 17 | 90 | 8 | 84 | 3.74e-29 | 109 |
MS.gene045747.t1 | AT5G66940 | 68.571 | 70 | 21 | 1 | 32 | 100 | 28 | 97 | 4.30e-29 | 108 |
MS.gene045747.t1 | AT3G52440 | 66.176 | 68 | 23 | 0 | 38 | 105 | 27 | 94 | 3.30e-28 | 107 |
MS.gene045747.t1 | AT3G52440 | 66.176 | 68 | 23 | 0 | 38 | 105 | 46 | 113 | 3.96e-28 | 107 |
MS.gene045747.t1 | AT2G28510 | 72.581 | 62 | 17 | 0 | 34 | 95 | 46 | 107 | 4.71e-28 | 107 |
MS.gene045747.t1 | AT3G47500 | 51.961 | 102 | 41 | 2 | 17 | 118 | 91 | 184 | 6.54e-28 | 110 |
MS.gene045747.t1 | AT3G61850 | 67.692 | 65 | 21 | 0 | 33 | 97 | 59 | 123 | 8.80e-28 | 107 |
MS.gene045747.t1 | AT3G61850 | 67.692 | 65 | 21 | 0 | 33 | 97 | 59 | 123 | 8.80e-28 | 107 |
MS.gene045747.t1 | AT3G61850 | 67.692 | 65 | 21 | 0 | 33 | 97 | 71 | 135 | 1.03e-27 | 107 |
MS.gene045747.t1 | AT1G21340 | 72.131 | 61 | 17 | 0 | 35 | 95 | 37 | 97 | 1.06e-27 | 106 |
MS.gene045747.t1 | AT3G61850 | 67.692 | 65 | 21 | 0 | 33 | 97 | 59 | 123 | 1.48e-27 | 107 |
MS.gene045747.t1 | AT3G61850 | 67.692 | 65 | 21 | 0 | 33 | 97 | 71 | 135 | 1.67e-27 | 107 |
MS.gene045747.t1 | AT5G02460 | 76.786 | 56 | 13 | 0 | 35 | 90 | 94 | 149 | 2.98e-27 | 107 |
MS.gene045747.t1 | AT4G24060 | 73.684 | 57 | 15 | 0 | 34 | 90 | 51 | 107 | 4.00e-27 | 106 |
MS.gene045747.t1 | AT1G28310 | 75.439 | 57 | 14 | 0 | 36 | 92 | 27 | 83 | 6.67e-27 | 105 |
MS.gene045747.t1 | AT1G28310 | 75.439 | 57 | 14 | 0 | 36 | 92 | 51 | 107 | 9.91e-27 | 105 |
MS.gene045747.t1 | AT5G62940 | 78.182 | 55 | 12 | 0 | 32 | 86 | 69 | 123 | 1.17e-26 | 105 |
MS.gene045747.t1 | AT1G64620 | 80.392 | 51 | 10 | 0 | 34 | 84 | 47 | 97 | 1.18e-26 | 105 |
MS.gene045747.t1 | AT5G39660 | 76.786 | 56 | 12 | 1 | 36 | 91 | 138 | 192 | 4.14e-26 | 105 |
MS.gene045747.t1 | AT5G39660 | 76.786 | 56 | 12 | 1 | 36 | 91 | 138 | 192 | 4.14e-26 | 105 |
MS.gene045747.t1 | AT5G39660 | 76.786 | 56 | 12 | 1 | 36 | 91 | 138 | 192 | 4.14e-26 | 105 |
MS.gene045747.t1 | AT4G00940 | 79.245 | 53 | 11 | 0 | 38 | 90 | 70 | 122 | 5.35e-26 | 102 |
MS.gene045747.t1 | AT4G00940 | 79.245 | 53 | 11 | 0 | 38 | 90 | 70 | 122 | 5.35e-26 | 102 |
MS.gene045747.t1 | AT4G00940 | 79.245 | 53 | 11 | 0 | 38 | 90 | 70 | 122 | 5.35e-26 | 102 |
MS.gene045747.t1 | AT4G21050 | 62.500 | 72 | 26 | 1 | 38 | 108 | 26 | 97 | 6.46e-26 | 100 |
MS.gene045747.t1 | AT1G47655 | 75.000 | 52 | 13 | 0 | 34 | 85 | 27 | 78 | 6.66e-26 | 100 |
MS.gene045747.t1 | AT1G29160 | 57.143 | 70 | 30 | 0 | 36 | 105 | 62 | 131 | 1.28e-25 | 98.6 |
MS.gene045747.t1 | AT5G62430 | 48.864 | 88 | 44 | 1 | 22 | 108 | 40 | 127 | 1.48e-25 | 101 |
MS.gene045747.t1 | AT2G46590 | 56.566 | 99 | 38 | 2 | 36 | 131 | 68 | 164 | 1.83e-25 | 102 |
MS.gene045747.t1 | AT2G46590 | 56.566 | 99 | 38 | 2 | 36 | 131 | 80 | 176 | 1.96e-25 | 102 |
MS.gene045747.t1 | AT2G34140 | 70.370 | 54 | 16 | 0 | 36 | 89 | 58 | 111 | 3.26e-25 | 97.4 |
MS.gene045747.t1 | AT1G26790 | 59.155 | 71 | 28 | 1 | 36 | 106 | 111 | 180 | 2.83e-24 | 99.0 |
MS.gene045747.t1 | AT1G69570 | 72.727 | 55 | 14 | 1 | 36 | 90 | 132 | 185 | 4.85e-24 | 99.0 |
MS.gene045747.t1 | AT4G21040 | 59.722 | 72 | 25 | 1 | 38 | 105 | 27 | 98 | 1.43e-23 | 94.7 |
MS.gene045747.t1 | AT4G21080 | 58.824 | 68 | 28 | 0 | 38 | 105 | 27 | 94 | 5.66e-22 | 90.9 |
MS.gene045747.t1 | AT4G21030 | 58.333 | 60 | 25 | 0 | 38 | 97 | 23 | 82 | 4.23e-16 | 73.9 |
Find 53 sgRNAs with CRISPR-Local
Find 58 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACCAATGATGTTGTTTCTTA+TGG | 0.089712 | 2.1:-35165885 | MS.gene045747:CDS |
CAGCAGTTATCAAATGAATT+TGG | 0.217916 | 2.1:-35165804 | MS.gene045747:CDS |
CCAATGATGTTGTTTCTTAT+GGG | 0.265532 | 2.1:-35165884 | MS.gene045747:CDS |
GCACCGTTGATCAGTCTTAC+TGG | 0.368181 | 2.1:-35165755 | MS.gene045747:CDS |
ATGAATTTGGATCGTTGGAT+TGG | 0.382150 | 2.1:-35165791 | MS.gene045747:CDS |
GTAAGAACTGCCGTCGCTAC+TGG | 0.382722 | 2.1:-35166148 | MS.gene045747:CDS |
GATGTTGTTTCTTATGGGCT+TGG | 0.395727 | 2.1:-35165879 | MS.gene045747:CDS |
ACAGTGAAGGTTCAACCGTT+AGG | 0.410245 | 2.1:-35165971 | MS.gene045747:CDS |
TCTTTGATTTATTTGATCTA+CGG | 0.419989 | 2.1:+35166081 | None:intergenic |
ATCAAATGAATTTGGATCGT+TGG | 0.421631 | 2.1:-35165796 | MS.gene045747:CDS |
CTTTGATTTATTTGATCTAC+GGG | 0.424113 | 2.1:+35166082 | None:intergenic |
TGAATTTGGATCGTTGGATT+GGG | 0.437910 | 2.1:-35165790 | MS.gene045747:CDS |
GATGATGATAATTCTGGTTA+TGG | 0.445814 | 2.1:+35166264 | None:intergenic |
ATGTTGTTTCTTATGGGCTT+GGG | 0.446424 | 2.1:-35165878 | MS.gene045747:CDS |
GTTACGAAGGACACCACCTT+TGG | 0.449873 | 2.1:+35166124 | None:intergenic |
CAGTGAAGGTTCAACCGTTA+GGG | 0.455669 | 2.1:-35165970 | MS.gene045747:CDS |
CCCATAAGAAACAACATCAT+TGG | 0.464285 | 2.1:+35165884 | None:intergenic |
CGTAACGTCCCGGTCGGCGG+TGG | 0.464731 | 2.1:-35166107 | MS.gene045747:CDS |
TGGCGTGCTTGCTGCTGAAA+CGG | 0.467885 | 2.1:+35166037 | None:intergenic |
CACGCCAACACCACCTCCAC+TGG | 0.474815 | 2.1:-35166021 | MS.gene045747:CDS |
CTTACTGGACACACTCTCAT+TGG | 0.475567 | 2.1:-35165740 | MS.gene045747:CDS |
TTATCAGCTTCCAGTGGAGG+TGG | 0.483911 | 2.1:+35166011 | None:intergenic |
AATGCAAGAAATTCATTCGA+TGG | 0.486084 | 2.1:-35166336 | MS.gene045747:CDS |
TACGGGAACCACCGCCGACC+GGG | 0.505985 | 2.1:+35166099 | None:intergenic |
GAAATTCATTCGATGGGAGG+TGG | 0.516720 | 2.1:-35166329 | MS.gene045747:CDS |
CTACGGGAACCACCGCCGAC+CGG | 0.519606 | 2.1:+35166098 | None:intergenic |
ATGATAATTCTGGTTATGGT+GGG | 0.521689 | 2.1:+35166268 | None:intergenic |
GCTTCCAGTGGAGGTGGTGT+TGG | 0.521828 | 2.1:+35166017 | None:intergenic |
GATGATAATTCTGGTTATGG+TGG | 0.523805 | 2.1:+35166267 | None:intergenic |
GGATCGTTGGATTGGGAAGG+TGG | 0.526946 | 2.1:-35165783 | MS.gene045747:CDS |
TTTGGATCGTTGGATTGGGA+AGG | 0.535121 | 2.1:-35165786 | MS.gene045747:CDS |
CTTCGTAACGTCCCGGTCGG+CGG | 0.554145 | 2.1:-35166110 | MS.gene045747:CDS |
ATGCAAGAAATTCATTCGAT+GGG | 0.560936 | 2.1:-35166335 | MS.gene045747:CDS |
GCTTGCTGCTGAAACGGTGA+TGG | 0.562137 | 2.1:+35166043 | None:intergenic |
GTCCTTCGTAACGTCCCGGT+CGG | 0.566351 | 2.1:-35166113 | MS.gene045747:CDS |
ATTCATTTGATAACTGCTGA+TGG | 0.567874 | 2.1:+35165808 | None:intergenic |
GACTTATCAGCTTCCAGTGG+AGG | 0.568248 | 2.1:+35166008 | None:intergenic |
TGCCGTCGCTACTGGACCAA+AGG | 0.572400 | 2.1:-35166140 | MS.gene045747:CDS |
CGTCGCTACTGGACCAAAGG+TGG | 0.580543 | 2.1:-35166137 | MS.gene045747:CDS |
CACCTTTGGTCCAGTAGCGA+CGG | 0.585434 | 2.1:+35166138 | None:intergenic |
GATTCTCATTCTAACAGTGA+AGG | 0.590117 | 2.1:-35165984 | MS.gene045747:CDS |
TGGTGTCCTTCGTAACGTCC+CGG | 0.594226 | 2.1:-35166117 | MS.gene045747:CDS |
TGTGGTACAGCACGGAGACT+CGG | 0.595362 | 2.1:-35165841 | MS.gene045747:CDS |
TAGATCAAATAAATCAAAGA+CGG | 0.598602 | 2.1:-35166078 | MS.gene045747:CDS |
CGCCGACCGGGACGTTACGA+AGG | 0.605026 | 2.1:+35166111 | None:intergenic |
TATAACAGAGTTAACCCTAA+CGG | 0.613913 | 2.1:+35165956 | None:intergenic |
CAAGAAATTCATTCGATGGG+AGG | 0.621582 | 2.1:-35166332 | MS.gene045747:CDS |
TGGTTGAACTTGAAGTTACG+AGG | 0.652946 | 2.1:+35165904 | None:intergenic |
TGGGAATGATCAAGTACATG+TGG | 0.657314 | 2.1:-35165859 | MS.gene045747:CDS |
CAAGTACATGTGGTACAGCA+CGG | 0.660421 | 2.1:-35165849 | MS.gene045747:CDS |
TCTGACTTATCAGCTTCCAG+TGG | 0.676214 | 2.1:+35166005 | None:intergenic |
TGTCCAGTAAGACTGATCAA+CGG | 0.726070 | 2.1:+35165752 | None:intergenic |
GTGTTGAAGGAATTACAGCG+AGG | 0.733816 | 2.1:+35166221 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAGATCAAATAAATCAAAGA+CGG | - | chr2.1:35165952-35165971 | MS.gene045747:CDS | 20.0% |
!!! | TCTTTGATTTATTTGATCTA+CGG | + | chr2.1:35165952-35165971 | None:intergenic | 20.0% |
!! | CTTTGATTTATTTGATCTAC+GGG | + | chr2.1:35165951-35165970 | None:intergenic | 25.0% |
ATCAAATGAATTTGGATCGT+TGG | - | chr2.1:35166234-35166253 | MS.gene045747:CDS | 30.0% | |
ATGCAAGAAATTCATTCGAT+GGG | - | chr2.1:35165695-35165714 | MS.gene045747:CDS | 30.0% | |
CAGCAGTTATCAAATGAATT+TGG | - | chr2.1:35166226-35166245 | MS.gene045747:CDS | 30.0% | |
TATAACAGAGTTAACCCTAA+CGG | + | chr2.1:35166077-35166096 | None:intergenic | 30.0% | |
! | ATGATAATTCTGGTTATGGT+GGG | + | chr2.1:35165765-35165784 | None:intergenic | 30.0% |
! | ATTCATTTGATAACTGCTGA+TGG | + | chr2.1:35166225-35166244 | None:intergenic | 30.0% |
! | GATGATGATAATTCTGGTTA+TGG | + | chr2.1:35165769-35165788 | None:intergenic | 30.0% |
! | GATGATGATGATGATAATTC+TGG | + | chr2.1:35165775-35165794 | None:intergenic | 30.0% |
!! | ACCAATGATGTTGTTTCTTA+TGG | - | chr2.1:35166145-35166164 | MS.gene045747:CDS | 30.0% |
!! | CCAATGATGTTGTTTCTTAT+GGG | - | chr2.1:35166146-35166165 | MS.gene045747:CDS | 30.0% |
!!! | TGGAAATCTTTTTTGTGTTG+AGG | - | chr2.1:35165721-35165740 | MS.gene045747:CDS | 30.0% |
ATGAATTTGGATCGTTGGAT+TGG | - | chr2.1:35166239-35166258 | MS.gene045747:CDS | 35.0% | |
CAGTTCTTACAAAAATGACG+AGG | + | chr2.1:35165872-35165891 | None:intergenic | 35.0% | |
CCCATAAGAAACAACATCAT+TGG | + | chr2.1:35166149-35166168 | None:intergenic | 35.0% | |
GATTCTCATTCTAACAGTGA+AGG | - | chr2.1:35166046-35166065 | MS.gene045747:CDS | 35.0% | |
TCAGGGAAGATGAAAAAGAA+AGG | + | chr2.1:35166338-35166357 | None:intergenic | 35.0% | |
TGAATTTGGATCGTTGGATT+GGG | - | chr2.1:35166240-35166259 | MS.gene045747:CDS | 35.0% | |
! | GATGATAATTCTGGTTATGG+TGG | + | chr2.1:35165766-35165785 | None:intergenic | 35.0% |
! | GTAGCAGAATTTTGTGTTGA+AGG | + | chr2.1:35165825-35165844 | None:intergenic | 35.0% |
!! | ATGTTGTTTCTTATGGGCTT+GGG | - | chr2.1:35166152-35166171 | MS.gene045747:CDS | 35.0% |
CAAGAAATTCATTCGATGGG+AGG | - | chr2.1:35165698-35165717 | MS.gene045747:CDS | 40.0% | |
TGGGAATGATCAAGTACATG+TGG | - | chr2.1:35166171-35166190 | MS.gene045747:CDS | 40.0% | |
TGGTTGAACTTGAAGTTACG+AGG | + | chr2.1:35166129-35166148 | None:intergenic | 40.0% | |
TGTCCAGTAAGACTGATCAA+CGG | + | chr2.1:35166281-35166300 | None:intergenic | 40.0% | |
!! | GATGTTGTTTCTTATGGGCT+TGG | - | chr2.1:35166151-35166170 | MS.gene045747:CDS | 40.0% |
AAAAATGACGAGGCTGAGAG+AGG | + | chr2.1:35165862-35165881 | None:intergenic | 45.0% | |
ACAGTGAAGGTTCAACCGTT+AGG | - | chr2.1:35166059-35166078 | MS.gene045747:CDS | 45.0% | |
CAAGTACATGTGGTACAGCA+CGG | - | chr2.1:35166181-35166200 | MS.gene045747:CDS | 45.0% | |
CAGTGAAGGTTCAACCGTTA+GGG | - | chr2.1:35166060-35166079 | MS.gene045747:CDS | 45.0% | |
CTTACTGGACACACTCTCAT+TGG | - | chr2.1:35166290-35166309 | MS.gene045747:CDS | 45.0% | |
GAAATTCATTCGATGGGAGG+TGG | - | chr2.1:35165701-35165720 | MS.gene045747:CDS | 45.0% | |
GTGTTGAAGGAATTACAGCG+AGG | + | chr2.1:35165812-35165831 | None:intergenic | 45.0% | |
TCTGACTTATCAGCTTCCAG+TGG | + | chr2.1:35166028-35166047 | None:intergenic | 45.0% | |
! | TTTGGATCGTTGGATTGGGA+AGG | - | chr2.1:35166244-35166263 | MS.gene045747:CDS | 45.0% |
GACTTATCAGCTTCCAGTGG+AGG | + | chr2.1:35166025-35166044 | None:intergenic | 50.0% | |
GCACCGTTGATCAGTCTTAC+TGG | - | chr2.1:35166275-35166294 | MS.gene045747:CDS | 50.0% | |
GTTACGAAGGACACCACCTT+TGG | + | chr2.1:35165909-35165928 | None:intergenic | 50.0% | |
TTATCAGCTTCCAGTGGAGG+TGG | + | chr2.1:35166022-35166041 | None:intergenic | 50.0% | |
CACCTTTGGTCCAGTAGCGA+CGG | + | chr2.1:35165895-35165914 | None:intergenic | 55.0% | |
GTAAGAACTGCCGTCGCTAC+TGG | - | chr2.1:35165882-35165901 | MS.gene045747:CDS | 55.0% | |
TGGTGTCCTTCGTAACGTCC+CGG | - | chr2.1:35165913-35165932 | MS.gene045747:CDS | 55.0% | |
TGTGGTACAGCACGGAGACT+CGG | - | chr2.1:35166189-35166208 | MS.gene045747:CDS | 55.0% | |
! | GCTTGCTGCTGAAACGGTGA+TGG | + | chr2.1:35165990-35166009 | None:intergenic | 55.0% |
! | GGATCGTTGGATTGGGAAGG+TGG | - | chr2.1:35166247-35166266 | MS.gene045747:CDS | 55.0% |
! | TGGCGTGCTTGCTGCTGAAA+CGG | + | chr2.1:35165996-35166015 | None:intergenic | 55.0% |
CGTCGCTACTGGACCAAAGG+TGG | - | chr2.1:35165893-35165912 | MS.gene045747:CDS | 60.0% | |
GCTTCCAGTGGAGGTGGTGT+TGG | + | chr2.1:35166016-35166035 | None:intergenic | 60.0% | |
GTCCTTCGTAACGTCCCGGT+CGG | - | chr2.1:35165917-35165936 | MS.gene045747:CDS | 60.0% | |
TGCCGTCGCTACTGGACCAA+AGG | - | chr2.1:35165890-35165909 | MS.gene045747:CDS | 60.0% | |
CACGCCAACACCACCTCCAC+TGG | - | chr2.1:35166009-35166028 | MS.gene045747:CDS | 65.0% | |
CTTCGTAACGTCCCGGTCGG+CGG | - | chr2.1:35165920-35165939 | MS.gene045747:CDS | 65.0% | |
CGCCGACCGGGACGTTACGA+AGG | + | chr2.1:35165922-35165941 | None:intergenic | 70.0% | |
CTACGGGAACCACCGCCGAC+CGG | + | chr2.1:35165935-35165954 | None:intergenic | 70.0% | |
TACGGGAACCACCGCCGACC+GGG | + | chr2.1:35165934-35165953 | None:intergenic | 70.0% | |
CGTAACGTCCCGGTCGGCGG+TGG | - | chr2.1:35165923-35165942 | MS.gene045747:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.1 | gene | 35165695 | 35166357 | 35165695 | ID=MS.gene045747 |
chr2.1 | mRNA | 35165695 | 35166357 | 35165695 | ID=MS.gene045747.t1;Parent=MS.gene045747 |
chr2.1 | exon | 35165695 | 35166357 | 35165695 | ID=MS.gene045747.t1.exon1;Parent=MS.gene045747.t1 |
chr2.1 | CDS | 35165695 | 35166357 | 35165695 | ID=cds.MS.gene045747.t1;Parent=MS.gene045747.t1 |
Gene Sequence |
Protein sequence |