AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene046078

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene046078.t1 MTR_0008s0390 90.517 232 16 1 78 309 47 272 5.09e-143 404
MS.gene046078.t1 MTR_0008s0470 74.603 252 37 3 78 309 47 291 3.10e-123 355
MS.gene046078.t1 MTR_0251s0050 71.368 234 57 5 78 309 47 272 1.29e-100 296
MS.gene046078.t1 MTR_2g089420 37.354 257 111 5 78 285 45 300 5.28e-49 169
MS.gene046078.t1 MTR_2g089450 39.744 234 107 7 78 309 46 247 2.67e-42 146
MS.gene046078.t1 MTR_1g043050 39.535 215 105 8 70 273 38 238 3.97e-37 133
MS.gene046078.t1 MTR_1g076150 49.032 155 68 3 78 231 46 190 4.72e-37 133
MS.gene046078.t1 MTR_1g043080 46.104 154 71 2 78 231 46 187 3.24e-36 130
MS.gene046078.t1 MTR_7g115650 46.207 145 65 2 78 212 46 187 4.04e-35 126
MS.gene046078.t1 MTR_4g100720 59.000 100 35 1 49 148 24 117 1.98e-34 124
MS.gene046078.t1 MTR_7g096930 55.172 116 36 3 52 151 4 119 8.79e-34 125
MS.gene046078.t1 MTR_0008s0280 39.801 201 97 7 78 272 46 228 1.75e-33 123
MS.gene046078.t1 MTR_4g125520 39.320 206 85 6 78 270 46 224 5.51e-33 124
MS.gene046078.t1 MTR_1g085640 38.863 211 91 4 78 256 46 250 2.61e-32 124
MS.gene046078.t1 MTR_1g112760 68.056 72 23 0 78 149 47 118 2.98e-32 119
MS.gene046078.t1 MTR_3g077110 69.444 72 22 0 78 149 46 117 3.27e-32 122
MS.gene046078.t1 MTR_1g085040 74.286 70 18 0 78 147 46 115 6.37e-32 122
MS.gene046078.t1 MTR_8g027345 64.706 85 30 0 78 162 46 130 7.45e-32 120
MS.gene046078.t1 MTR_4g105130 43.750 144 68 2 78 221 46 176 9.40e-32 121
MS.gene046078.t1 MTR_1g100653 56.989 93 40 0 56 148 24 116 1.18e-31 120
MS.gene046078.t1 MTR_2g097910 72.857 70 19 0 78 147 54 123 2.35e-31 119
MS.gene046078.t1 MTR_3g028740 58.242 91 38 0 57 147 35 125 3.76e-31 119
MS.gene046078.t1 MTR_1g017000 49.573 117 51 2 78 193 47 156 4.31e-31 117
MS.gene046078.t1 MTR_7g117730 71.429 70 20 0 78 147 46 115 4.58e-31 117
MS.gene046078.t1 MTR_8g031360 70.833 72 21 0 78 149 48 119 4.65e-31 118
MS.gene046078.t1 MTR_3g097450 70.000 70 21 0 78 147 46 115 5.50e-31 118
MS.gene046078.t1 MTR_4g065017 62.353 85 31 1 78 162 51 134 6.21e-31 119
MS.gene046078.t1 MTR_4g073420 64.384 73 26 0 78 150 46 118 6.42e-31 117
MS.gene046078.t1 MTR_0063s0090 69.118 68 21 0 78 145 46 113 7.50e-31 115
MS.gene046078.t1 MTR_7g110830 71.429 70 20 0 78 147 46 115 7.62e-31 119
MS.gene046078.t1 MTR_7g076740 71.429 70 20 0 78 147 47 116 7.80e-31 118
MS.gene046078.t1 MTR_8g095390 52.041 98 43 1 57 150 25 122 9.10e-31 118
MS.gene046078.t1 MTR_4g102380 39.877 163 87 4 32 190 6 161 9.96e-31 117
MS.gene046078.t1 MTR_5g079670 68.056 72 23 0 78 149 45 116 1.15e-30 115
MS.gene046078.t1 MTR_0197s0010 51.351 111 48 3 78 184 35 143 1.31e-30 115
MS.gene046078.t1 MTR_6g055910 57.143 91 30 1 78 168 19 100 1.99e-30 115
MS.gene046078.t1 MTR_5g029840 56.044 91 40 0 71 161 39 129 2.36e-30 117
MS.gene046078.t1 MTR_1g110460 46.610 118 60 1 51 168 33 147 3.66e-30 116
MS.gene046078.t1 MTR_3g074520 68.056 72 23 0 78 149 46 117 3.85e-30 117
MS.gene046078.t1 MTR_1g086530 50.847 118 43 2 78 189 67 175 4.72e-30 115
MS.gene046078.t1 MTR_4g082290 72.857 70 19 0 78 147 46 115 4.78e-30 117
MS.gene046078.t1 MTR_2g089620 53.763 93 43 0 57 149 25 117 5.11e-30 116
MS.gene046078.t1 MTR_4g082230 72.857 70 19 0 78 147 46 115 5.13e-30 117
MS.gene046078.t1 MTR_7g011170 51.402 107 46 2 78 180 46 150 5.67e-30 115
MS.gene046078.t1 MTR_1g100667 67.606 71 23 0 78 148 47 117 6.99e-30 114
MS.gene046078.t1 MTR_6g090405 56.701 97 35 1 78 167 47 143 6.99e-30 114
MS.gene046078.t1 MTR_6g055910 57.143 91 30 1 78 168 48 129 9.39e-30 114
MS.gene046078.t1 MTR_2g011660 61.250 80 31 0 70 149 39 118 9.83e-30 115
MS.gene046078.t1 MTR_3g083540 59.259 81 33 0 70 150 67 147 1.14e-29 115
MS.gene046078.t1 MTR_4g091490 66.667 72 24 0 78 149 47 118 1.21e-29 115
MS.gene046078.t1 MTR_3g103570 37.267 161 99 2 71 230 40 199 1.37e-29 115
MS.gene046078.t1 MTR_8g017390 56.842 95 30 2 69 152 29 123 1.38e-29 117
MS.gene046078.t1 MTR_4g478180 68.056 72 23 0 78 149 47 118 1.59e-29 115
MS.gene046078.t1 MTR_1g086510 41.497 147 71 2 51 191 28 165 1.67e-29 113
MS.gene046078.t1 MTR_3g065440 43.972 141 67 4 32 168 6 138 1.71e-29 114
MS.gene046078.t1 MTR_7g010210 35.270 241 117 7 78 298 46 267 2.10e-29 114
MS.gene046078.t1 MTR_5g079290 42.581 155 68 4 78 217 51 199 2.11e-29 113
MS.gene046078.t1 MTR_3g461490 67.143 70 23 0 78 147 46 115 2.86e-29 114
MS.gene046078.t1 MTR_1g062940 49.020 102 42 1 78 169 40 141 3.24e-29 111
MS.gene046078.t1 MTR_2g064160 66.667 72 24 0 78 149 45 116 3.29e-29 114
MS.gene046078.t1 MTR_4g485530 52.688 93 44 0 57 149 25 117 3.45e-29 110
MS.gene046078.t1 MTR_7g035075 42.647 136 74 1 57 192 27 158 3.62e-29 111
MS.gene046078.t1 MTR_5g007370 53.684 95 40 1 78 168 46 140 3.62e-29 113
MS.gene046078.t1 MTR_1g045610 58.333 84 35 0 78 161 55 138 3.69e-29 112
MS.gene046078.t1 MTR_2g096380 40.141 142 72 3 76 216 19 148 3.99e-29 111
MS.gene046078.t1 MTR_8g020490 67.143 70 23 0 78 147 42 111 4.56e-29 112
MS.gene046078.t1 MTR_4g121460 65.714 70 24 0 78 147 46 115 5.62e-29 114
MS.gene046078.t1 MTR_5g014990 60.526 76 30 0 74 149 43 118 5.73e-29 113
MS.gene046078.t1 MTR_5g042030 65.753 73 25 0 77 149 40 112 6.00e-29 112
MS.gene046078.t1 MTR_2g099740 66.667 72 24 0 78 149 46 117 6.13e-29 114
MS.gene046078.t1 MTR_2g067420 72.308 65 18 0 78 142 48 112 9.71e-29 112
MS.gene046078.t1 MTR_5g078140 65.714 70 24 0 78 147 46 115 9.76e-29 112
MS.gene046078.t1 MTR_7g010210 68.571 70 22 0 78 147 46 115 1.02e-28 111
MS.gene046078.t1 MTR_4g063100 62.500 72 27 0 76 147 10 81 1.04e-28 110
MS.gene046078.t1 MTR_4g057635 58.228 79 33 0 71 149 40 118 1.19e-28 112
MS.gene046078.t1 MTR_6g012690 70.000 70 21 0 78 147 46 115 1.56e-28 112
MS.gene046078.t1 MTR_8g042410 65.714 70 24 0 78 147 71 140 1.59e-28 115
MS.gene046078.t1 MTR_8g017440 65.714 70 24 0 78 147 46 115 1.60e-28 112
MS.gene046078.t1 MTR_2g096380 40.714 140 70 3 78 216 40 167 1.61e-28 110
MS.gene046078.t1 MTR_1g073170 57.143 84 36 0 78 161 54 137 1.65e-28 110
MS.gene046078.t1 MTR_8g060940 71.642 67 19 0 78 144 41 107 1.67e-28 110
MS.gene046078.t1 MTR_8g017540 63.889 72 26 0 78 149 92 163 1.71e-28 113
MS.gene046078.t1 MTR_3g011610 53.191 94 43 1 78 170 71 164 2.34e-28 114
MS.gene046078.t1 MTR_8g098860 65.714 70 24 0 78 147 46 115 2.49e-28 111
MS.gene046078.t1 MTR_8g017340 55.789 95 32 2 69 153 29 123 2.96e-28 114
MS.gene046078.t1 MTR_1g017140 51.724 87 42 0 76 162 45 131 3.31e-28 111
MS.gene046078.t1 MTR_4g063100 64.286 70 25 0 78 147 41 110 3.61e-28 109
MS.gene046078.t1 MTR_2g034790 62.857 70 26 0 78 147 46 115 4.29e-28 111
MS.gene046078.t1 MTR_3g052450 58.904 73 30 0 75 147 71 143 4.69e-28 114
MS.gene046078.t1 MTR_8g017500 65.714 70 24 0 78 147 46 115 5.03e-28 111
MS.gene046078.t1 MTR_7g111290 71.875 64 18 0 78 141 4 67 5.29e-28 111
MS.gene046078.t1 MTR_0001s0360 65.278 72 25 0 78 149 41 112 8.83e-28 108
MS.gene046078.t1 MTR_5g078950 70.588 68 20 0 78 145 41 108 9.28e-28 108
MS.gene046078.t1 MTR_5g078910 65.278 72 25 0 78 149 41 112 1.24e-27 109
MS.gene046078.t1 MTR_3g052430 61.429 70 27 0 78 147 75 144 1.31e-27 112
MS.gene046078.t1 MTR_8g017350 54.737 95 33 2 69 153 29 123 1.41e-27 112
MS.gene046078.t1 MTR_5g079220 63.889 72 26 0 78 149 55 126 1.65e-27 108
MS.gene046078.t1 MTR_6g006030 50.000 90 45 0 57 146 27 116 2.27e-27 106
MS.gene046078.t1 MTR_7g111290 71.875 64 18 0 78 141 46 109 2.56e-27 110
MS.gene046078.t1 MTR_5g010020 67.692 65 21 0 78 142 46 110 3.82e-27 108
MS.gene046078.t1 MTR_7g102110 56.962 79 34 0 71 149 40 118 8.56e-27 106
MS.gene046078.t1 MTR_5g078800 63.889 72 26 0 78 149 41 112 9.13e-27 106
MS.gene046078.t1 MTR_5g079120 44.068 118 53 2 62 166 67 184 9.65e-27 107
MS.gene046078.t1 MTR_7g017260 49.474 95 44 1 78 172 61 151 1.01e-26 106
MS.gene046078.t1 MTR_1g021230 49.474 95 48 0 78 172 91 185 1.06e-26 109
MS.gene046078.t1 MTR_5g078860 63.889 72 26 0 78 149 41 112 1.07e-26 107
MS.gene046078.t1 MTR_7g087130 60.256 78 31 0 70 147 38 115 1.71e-26 107
MS.gene046078.t1 MTR_6g009430 62.500 72 27 0 78 149 46 117 2.12e-26 106
MS.gene046078.t1 MTR_4g128670 63.768 69 25 0 74 142 43 111 2.23e-26 107
MS.gene046078.t1 MTR_6g012180 63.014 73 27 0 70 142 38 110 2.77e-26 106
MS.gene046078.t1 MTR_0140s0030 62.857 70 26 0 78 147 47 116 4.63e-26 105
MS.gene046078.t1 MTR_0489s0020 62.857 70 26 0 78 147 47 116 4.63e-26 105
MS.gene046078.t1 MTR_3g039990 62.857 70 26 0 78 147 47 116 8.21e-26 104
MS.gene046078.t1 MTR_2g095520 64.615 65 23 0 78 142 47 111 1.28e-25 104
MS.gene046078.t1 MTR_4g097570 49.462 93 47 0 76 168 45 137 1.77e-25 103
MS.gene046078.t1 MTR_4g097570 48.387 93 48 0 76 168 46 138 2.86e-25 102
MS.gene046078.t1 MTR_0247s0040 63.235 68 25 0 78 145 41 108 8.44e-25 99.0
MS.gene046078.t1 MTR_0193s0090 36.196 163 85 4 78 239 41 185 2.04e-24 98.6
MS.gene046078.t1 MTR_2g033170 49.462 93 47 0 56 148 36 128 5.81e-24 100
MS.gene046078.t1 MTR_4g123040 50.538 93 46 0 56 148 36 128 1.23e-23 99.0
MS.gene046078.t1 MTR_2g088170 62.857 70 26 0 78 147 63 132 1.89e-23 100
MS.gene046078.t1 MTR_5g078930 50.000 92 45 1 78 168 43 134 1.96e-23 96.3
MS.gene046078.t1 MTR_1g083630 57.143 70 30 0 78 147 46 115 5.17e-23 99.8
MS.gene046078.t1 MTR_3g101290 60.000 70 28 0 79 148 69 138 8.97e-23 94.7
MS.gene046078.t1 MTR_7g109320 55.696 79 35 0 70 148 38 116 1.52e-22 96.7
MS.gene046078.t1 MTR_5g016510 38.583 127 69 2 80 206 38 155 2.18e-22 95.5
MS.gene046078.t1 MTR_4g019370 39.344 122 49 3 80 176 71 192 3.40e-22 95.5
MS.gene046078.t1 MTR_5g062790 44.444 99 47 3 78 168 43 141 1.40e-21 93.2
MS.gene046078.t1 MTR_6g015455 58.824 68 28 0 80 147 38 105 2.22e-21 95.1
MS.gene046078.t1 MTR_8g006470 55.556 72 31 1 78 148 44 115 3.37e-21 91.7
MS.gene046078.t1 MTR_3g045430 41.667 108 60 1 40 147 12 116 4.19e-21 91.7
MS.gene046078.t1 MTR_6g074860 58.209 67 28 0 80 146 37 103 4.25e-21 90.5
MS.gene046078.t1 MTR_4g094982 52.941 68 32 0 80 147 38 105 1.14e-20 89.7
MS.gene046078.t1 MTR_5g049190 35.833 120 77 0 80 199 52 171 1.65e-20 89.0
MS.gene046078.t1 MTR_5g041570 54.412 68 31 0 80 147 167 234 3.72e-20 90.5
MS.gene046078.t1 MTR_4g029540 45.918 98 49 3 78 174 44 138 5.86e-20 88.2
MS.gene046078.t1 MTR_4g128190 43.023 86 47 2 62 146 17 101 8.23e-20 87.0
MS.gene046078.t1 MTR_5g070020 47.059 68 36 0 80 147 155 222 1.18e-19 88.2
MS.gene046078.t1 MTR_4g082040 52.941 68 32 0 80 147 138 205 1.47e-19 89.0
MS.gene046078.t1 MTR_4g105660 43.023 86 45 2 65 147 196 280 6.09e-19 87.0
MS.gene046078.t1 MTR_3g463400 47.059 68 36 0 80 147 166 233 6.82e-19 87.0
MS.gene046078.t1 MTR_7g451170 34.351 131 80 2 80 206 224 352 6.96e-19 86.7
MS.gene046078.t1 MTR_6g027340 39.655 116 63 4 80 189 49 163 8.60e-19 83.2
MS.gene046078.t1 MTR_5g088080 46.053 76 38 2 78 152 46 119 8.87e-19 84.7
MS.gene046078.t1 MTR_5g088150 46.053 76 38 2 78 152 46 119 8.87e-19 84.7
MS.gene046078.t1 MTR_5g488210 46.053 76 38 2 78 152 46 119 8.87e-19 84.7
MS.gene046078.t1 MTR_5g088640 39.604 101 49 3 78 168 46 144 1.16e-18 84.3
MS.gene046078.t1 MTR_5g488170 46.053 76 38 2 78 152 46 119 1.34e-18 83.6
MS.gene046078.t1 MTR_7g035350 37.209 129 61 5 80 191 258 383 1.52e-18 85.9
MS.gene046078.t1 MTR_7g061330 43.956 91 46 1 57 147 128 213 2.00e-18 85.9
MS.gene046078.t1 MTR_7g461410 43.956 91 46 1 57 147 128 213 2.00e-18 85.9
MS.gene046078.t1 MTR_5g088610 34.746 118 69 2 78 187 43 160 2.26e-18 84.7
MS.gene046078.t1 MTR_7g037260 49.275 69 35 0 79 147 177 245 2.66e-18 84.7
MS.gene046078.t1 MTR_6g027360 39.286 112 62 3 80 185 111 222 3.07e-18 83.6
MS.gene046078.t1 MTR_7g061330 43.956 91 46 1 57 147 92 177 3.26e-18 85.1
MS.gene046078.t1 MTR_3g110028 51.471 68 33 0 80 147 118 185 3.56e-18 85.5
MS.gene046078.t1 MTR_1g026870 51.471 68 33 0 80 147 118 185 4.12e-18 85.5
MS.gene046078.t1 MTR_3g077650 44.118 68 38 0 80 147 214 281 4.37e-18 84.7
MS.gene046078.t1 MTR_4g088015 38.542 96 50 1 80 175 254 340 5.13e-18 84.3
MS.gene046078.t1 MTR_5g082910 53.030 66 31 0 79 144 51 116 7.20e-18 82.4
MS.gene046078.t1 MTR_7g086960 54.412 68 31 0 80 147 122 189 1.69e-17 82.4
MS.gene046078.t1 MTR_7g450950 33.333 105 63 3 71 175 181 278 2.74e-17 81.3
MS.gene046078.t1 MTR_1g057980 36.283 113 60 3 80 185 113 220 4.82e-17 80.1
MS.gene046078.t1 MTR_6g027370 35.156 128 68 3 80 207 132 244 7.26e-17 80.5
MS.gene046078.t1 MTR_3g089045 54.412 68 31 0 80 147 49 116 9.37e-17 79.3
MS.gene046078.t1 MTR_5g010650 33.588 131 76 1 22 141 74 204 8.12e-16 78.2
MS.gene046078.t1 MTR_6g055910 50.746 67 24 1 102 168 2 59 2.30e-15 73.9
MS.gene046078.t1 MTR_5g007300 69.767 43 13 0 78 120 98 140 1.41e-14 70.1
MS.gene046078.t1 MTR_7g037130 39.535 86 50 1 79 164 177 260 7.59e-14 71.6
MS.gene046078.t1 MTR_2g096380 34.483 116 63 3 102 216 1 104 7.98e-14 68.9
MS.gene046078.t1 MTR_1g085880 37.273 110 66 2 70 176 38 147 2.08e-13 68.2
MS.gene046078.t1 MTR_4g063100 58.696 46 19 0 102 147 1 46 2.16e-13 67.8
MS.gene046078.t1 MTR_7g061550 46.032 63 34 0 78 140 41 103 2.39e-13 70.1
MS.gene046078.t1 MTR_1g085770 37.273 110 66 2 70 176 38 147 4.42e-13 68.9
MS.gene046078.t1 MTR_8g468380 45.205 73 40 0 83 155 58 130 2.40e-12 67.4
MS.gene046078.t1 MTR_5g038910 45.455 66 36 0 83 148 62 127 8.83e-12 65.9
MS.gene046078.t1 MTR_5g038910 43.478 69 39 0 80 148 59 127 1.38e-11 65.1
MS.gene046078.t1 MTR_2g088730 58.974 39 16 0 102 140 34 72 3.28e-11 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene046078.t1 AT3G23250 44.134 179 79 5 78 235 46 224 9.35e-39 138
MS.gene046078.t1 AT2G31180 50.000 154 63 3 78 231 46 185 2.48e-38 136
MS.gene046078.t1 AT1G06180 45.455 154 70 3 78 231 46 185 8.57e-35 127
MS.gene046078.t1 AT4G38620 52.294 109 50 1 78 186 46 152 1.80e-34 127
MS.gene046078.t1 AT3G13540 38.095 189 97 4 57 230 36 219 4.94e-34 125
MS.gene046078.t1 AT5G14750 74.286 70 18 0 78 147 50 119 1.12e-33 122
MS.gene046078.t1 AT5G14750 75.000 68 17 0 80 147 18 85 1.38e-33 121
MS.gene046078.t1 AT5G35550 63.158 95 31 2 57 147 26 120 2.28e-33 123
MS.gene046078.t1 AT3G27920 61.176 85 33 0 78 162 48 132 3.64e-33 122
MS.gene046078.t1 AT1G79180 61.798 89 34 0 72 160 75 163 3.92e-33 124
MS.gene046078.t1 AT5G35550 62.500 88 33 0 60 147 30 117 1.06e-32 122
MS.gene046078.t1 AT5G40330 72.857 70 19 0 78 147 46 115 1.36e-32 120
MS.gene046078.t1 AT1G79180 65.060 83 29 0 78 160 48 130 1.52e-32 122
MS.gene046078.t1 AT4G28110 62.500 80 30 0 70 149 38 117 4.10e-32 120
MS.gene046078.t1 AT1G22640 39.752 161 78 4 78 230 46 195 4.41e-32 120
MS.gene046078.t1 AT1G16490 70.000 70 21 0 78 147 48 117 8.26e-32 120
MS.gene046078.t1 AT5G12870 72.857 70 19 0 78 147 52 121 9.33e-32 120
MS.gene046078.t1 AT3G13890 64.557 79 28 0 71 149 48 126 1.23e-31 121
MS.gene046078.t1 AT5G54230 54.839 93 42 0 57 149 25 117 1.81e-31 120
MS.gene046078.t1 AT5G16770 68.056 72 23 0 78 149 46 117 2.85e-31 119
MS.gene046078.t1 AT5G16770 68.056 72 23 0 78 149 46 117 2.85e-31 119
MS.gene046078.t1 AT1G09540 46.099 141 70 1 78 218 46 180 3.15e-31 120
MS.gene046078.t1 AT3G61250 70.833 72 21 0 78 149 46 117 4.08e-31 118
MS.gene046078.t1 AT5G16770 68.056 72 23 0 78 149 46 117 4.58e-31 119
MS.gene046078.t1 AT5G16770 68.056 72 23 0 78 149 46 117 4.58e-31 119
MS.gene046078.t1 AT1G74430 71.429 70 20 0 78 147 46 115 5.12e-31 117
MS.gene046078.t1 AT2G16720 68.056 72 23 0 78 149 46 117 5.50e-31 117
MS.gene046078.t1 AT4G01680 57.282 103 32 2 78 168 46 148 6.00e-31 116
MS.gene046078.t1 AT5G52600 73.239 71 19 0 78 148 46 116 6.68e-31 115
MS.gene046078.t1 AT3G02940 68.056 72 23 0 78 149 46 117 7.79e-31 118
MS.gene046078.t1 AT5G26660 69.444 72 22 0 76 147 13 84 9.25e-31 118
MS.gene046078.t1 AT4G12350 33.166 199 125 3 32 230 6 196 1.17e-30 117
MS.gene046078.t1 AT3G02940 68.056 72 23 0 78 149 46 117 1.21e-30 117
MS.gene046078.t1 AT3G02940 68.056 72 23 0 78 149 46 117 1.21e-30 117
MS.gene046078.t1 AT4G01680 57.282 103 32 2 78 168 46 148 1.86e-30 117
MS.gene046078.t1 AT4G05100 61.250 80 31 0 70 149 39 118 1.94e-30 117
MS.gene046078.t1 AT4G34990 51.304 115 44 2 78 192 46 148 2.04e-30 116
MS.gene046078.t1 AT4G01680 57.282 103 32 2 78 168 58 160 2.05e-30 117
MS.gene046078.t1 AT3G01140 72.222 72 20 0 78 149 46 117 3.10e-30 117
MS.gene046078.t1 AT5G07700 51.923 104 38 1 62 153 18 121 3.58e-30 117
MS.gene046078.t1 AT5G07700 51.923 104 38 1 62 153 18 121 3.58e-30 117
MS.gene046078.t1 AT3G12820 67.143 70 23 0 80 149 2 71 3.73e-30 113
MS.gene046078.t1 AT1G35515 57.692 78 33 0 76 153 44 121 4.11e-30 114
MS.gene046078.t1 AT4G09460 63.889 72 26 0 78 149 46 117 4.16e-30 114
MS.gene046078.t1 AT3G01140 72.222 72 20 0 78 149 89 160 4.75e-30 117
MS.gene046078.t1 AT5G10280 68.056 72 23 0 78 149 46 117 5.24e-30 116
MS.gene046078.t1 AT5G65230 68.056 72 23 0 78 149 46 117 5.40e-30 115
MS.gene046078.t1 AT3G08500 54.945 91 41 0 57 147 43 133 6.14e-30 116
MS.gene046078.t1 AT3G11440 48.571 105 42 1 78 170 75 179 7.45e-30 118
MS.gene046078.t1 AT5G06100 65.714 70 24 0 78 147 66 135 8.19e-30 118
MS.gene046078.t1 AT5G16600 41.216 148 71 4 78 218 46 184 8.85e-30 115
MS.gene046078.t1 AT3G12820 66.667 72 24 0 78 149 48 119 9.09e-30 113
MS.gene046078.t1 AT5G15310 69.444 72 22 0 78 149 46 117 1.34e-29 115
MS.gene046078.t1 AT5G62320 65.278 72 25 0 78 149 54 125 1.36e-29 113
MS.gene046078.t1 AT5G15310 69.444 72 22 0 78 149 46 117 1.37e-29 115
MS.gene046078.t1 AT3G11440 48.571 105 42 1 78 170 75 179 1.39e-29 118
MS.gene046078.t1 AT3G11440 48.571 105 42 1 78 170 75 179 1.39e-29 118
MS.gene046078.t1 AT3G11440 48.571 105 42 1 78 170 75 179 1.39e-29 118
MS.gene046078.t1 AT5G06100 65.714 70 24 0 78 147 66 135 1.42e-29 118
MS.gene046078.t1 AT5G06100 65.714 70 24 0 78 147 66 135 1.42e-29 118
MS.gene046078.t1 AT5G06100 65.714 70 24 0 78 147 66 135 1.42e-29 118
MS.gene046078.t1 AT5G06100 65.714 70 24 0 78 147 66 135 1.42e-29 118
MS.gene046078.t1 AT5G26660 70.000 70 21 0 78 147 46 115 1.44e-29 115
MS.gene046078.t1 AT4G21440 61.250 80 31 0 70 149 38 117 1.60e-29 115
MS.gene046078.t1 AT4G26930 65.217 69 24 0 78 146 53 121 1.65e-29 116
MS.gene046078.t1 AT5G15310 68.493 73 23 0 78 150 46 118 1.79e-29 113
MS.gene046078.t1 AT1G56160 70.000 70 21 0 78 147 48 117 1.80e-29 114
MS.gene046078.t1 AT3G23250 40.719 167 78 5 90 235 1 167 1.93e-29 112
MS.gene046078.t1 AT3G49690 64.000 75 27 0 76 150 45 119 2.16e-29 114
MS.gene046078.t1 AT4G22680 44.915 118 59 2 32 149 6 117 2.54e-29 113
MS.gene046078.t1 AT3G47600 55.435 92 41 0 56 147 18 109 2.55e-29 114
MS.gene046078.t1 AT3G13890 66.667 72 24 0 78 149 46 117 3.20e-29 114
MS.gene046078.t1 AT3G01530 66.667 69 23 0 78 146 59 127 3.76e-29 111
MS.gene046078.t1 AT4G17785 62.500 72 27 0 78 149 47 118 4.57e-29 114
MS.gene046078.t1 AT4G17785 62.500 72 27 0 78 149 47 118 4.97e-29 114
MS.gene046078.t1 AT1G57560 63.889 72 26 0 78 149 46 117 5.39e-29 112
MS.gene046078.t1 AT1G57560 63.889 72 26 0 78 149 46 117 6.39e-29 113
MS.gene046078.t1 AT5G57620 62.162 74 28 0 76 149 45 118 7.08e-29 113
MS.gene046078.t1 AT5G55020 66.667 69 23 0 78 146 60 128 7.72e-29 115
MS.gene046078.t1 AT1G18570 55.914 93 41 0 57 149 26 118 9.14e-29 113
MS.gene046078.t1 AT3G12720 42.276 123 54 1 57 179 35 140 1.05e-28 112
MS.gene046078.t1 AT3G46130 58.025 81 34 0 68 148 1 81 1.13e-28 110
MS.gene046078.t1 AT5G59780 51.515 99 36 1 62 148 14 112 1.17e-28 110
MS.gene046078.t1 AT5G59780 63.014 73 27 0 76 148 19 91 1.19e-28 110
MS.gene046078.t1 AT4G13480 59.524 84 34 0 78 161 40 123 1.34e-28 111
MS.gene046078.t1 AT3G27810 63.380 71 26 0 76 146 3 73 1.51e-28 108
MS.gene046078.t1 AT5G60890 58.974 78 32 0 70 147 38 115 1.58e-28 111
MS.gene046078.t1 AT5G56110 67.143 70 23 0 78 147 46 115 1.64e-28 112
MS.gene046078.t1 AT3G46130 63.014 73 27 0 76 148 19 91 1.91e-28 110
MS.gene046078.t1 AT5G65790 59.740 77 31 0 74 150 43 119 2.02e-28 113
MS.gene046078.t1 AT5G40350 61.333 75 29 0 75 149 3 77 2.05e-28 108
MS.gene046078.t1 AT2G32460 64.286 70 25 0 78 147 52 121 2.34e-28 114
MS.gene046078.t1 AT5G61420 50.495 101 38 1 62 150 18 118 2.36e-28 112
MS.gene046078.t1 AT2G32460 64.286 70 25 0 78 147 40 109 2.39e-28 114
MS.gene046078.t1 AT1G66230 65.714 70 24 0 78 147 46 115 2.69e-28 110
MS.gene046078.t1 AT5G14340 65.714 70 24 0 78 147 58 127 2.86e-28 110
MS.gene046078.t1 AT3G46130 51.515 99 36 1 62 148 15 113 2.97e-28 110
MS.gene046078.t1 AT1G18710 65.714 70 24 0 78 147 46 115 2.98e-28 110
MS.gene046078.t1 AT1G68320 66.197 71 24 0 78 148 53 123 3.06e-28 110
MS.gene046078.t1 AT5G07690 61.842 76 29 0 78 153 46 121 3.10e-28 111
MS.gene046078.t1 AT3G62610 42.975 121 63 2 27 147 1 115 3.44e-28 111
MS.gene046078.t1 AT2G47460 57.692 78 33 0 70 147 38 115 3.45e-28 112
MS.gene046078.t1 AT3G24310 58.333 84 35 0 78 161 52 135 4.12e-28 110
MS.gene046078.t1 AT3G27810 48.889 90 46 0 57 146 33 122 5.69e-28 108
MS.gene046078.t1 AT5G40350 48.387 93 48 0 57 149 30 122 6.62e-28 108
MS.gene046078.t1 AT3G30210 43.651 126 62 2 60 184 43 160 6.90e-28 109
MS.gene046078.t1 AT1G08810 49.074 108 53 2 78 184 46 152 7.56e-28 109
MS.gene046078.t1 AT1G63910 64.286 70 25 0 78 147 46 115 8.30e-28 111
MS.gene046078.t1 AT1G25340 64.789 71 25 0 78 148 52 122 8.91e-28 109
MS.gene046078.t1 AT1G74650 65.278 72 25 0 78 149 46 117 9.36e-28 110
MS.gene046078.t1 AT1G34670 65.278 72 25 0 78 149 46 117 1.16e-27 110
MS.gene046078.t1 AT5G23000 61.111 72 28 0 78 149 47 118 2.00e-27 109
MS.gene046078.t1 AT2G36890 60.526 76 30 0 74 149 43 118 2.01e-27 108
MS.gene046078.t1 AT4G37780 59.459 74 30 0 76 149 45 118 2.59e-27 108
MS.gene046078.t1 AT5G49330 64.286 70 25 0 78 147 46 115 3.00e-27 109
MS.gene046078.t1 AT3G28470 45.690 116 59 1 78 189 46 161 3.41e-27 108
MS.gene046078.t1 AT2G36890 60.526 76 30 0 74 149 84 159 3.77e-27 108
MS.gene046078.t1 AT1G74080 66.667 69 23 0 78 146 46 114 4.42e-27 108
MS.gene046078.t1 AT3G47600 64.286 70 25 0 78 147 46 115 6.50e-27 108
MS.gene046078.t1 AT2G26960 63.768 69 25 0 78 146 54 122 8.59e-27 109
MS.gene046078.t1 AT2G47190 61.972 71 27 0 78 148 54 124 1.09e-26 106
MS.gene046078.t1 AT3G28910 64.286 70 25 0 78 147 46 115 1.31e-26 107
MS.gene046078.t1 AT5G62470 51.485 101 47 1 78 178 46 144 1.67e-26 107
MS.gene046078.t1 AT1G25340 65.672 67 23 0 82 148 51 117 2.06e-26 105
MS.gene046078.t1 AT1G48000 61.972 71 27 0 78 148 66 136 2.08e-26 104
MS.gene046078.t1 AT1G66370 33.019 212 114 4 78 270 42 244 2.94e-26 104
MS.gene046078.t1 AT5G52260 65.278 72 25 0 78 149 46 117 3.65e-26 104
MS.gene046078.t1 AT1G25340 65.672 67 23 0 82 148 51 117 4.21e-26 105
MS.gene046078.t1 AT5G62470 51.515 99 46 1 80 178 47 143 4.67e-26 106
MS.gene046078.t1 AT3G48920 62.319 69 26 0 78 146 52 120 6.08e-26 103
MS.gene046078.t1 AT3G53200 58.333 72 30 0 76 147 8 79 2.05e-25 101
MS.gene046078.t1 AT4G25560 61.111 72 28 0 78 149 44 115 2.55e-25 102
MS.gene046078.t1 AT5G14750 70.690 58 17 0 90 147 1 58 1.33e-24 97.1
MS.gene046078.t1 AT5G14750 70.690 58 17 0 90 147 1 58 1.33e-24 97.1
MS.gene046078.t1 AT3G53200 58.571 70 29 0 78 147 43 112 1.90e-24 99.4
MS.gene046078.t1 AT3G06490 50.000 92 46 0 57 148 32 123 7.54e-24 99.8
MS.gene046078.t1 AT5G49620 44.531 128 60 2 78 205 60 176 9.56e-24 99.0
MS.gene046078.t1 AT1G22640 36.364 154 70 5 90 235 1 134 7.59e-23 94.4
MS.gene046078.t1 AT1G66380 63.889 72 26 0 76 147 7 78 1.69e-22 90.5
MS.gene046078.t1 AT1G71030 56.716 67 29 0 83 149 5 71 7.50e-22 90.9
MS.gene046078.t1 AT1G71030 56.716 67 29 0 83 149 19 85 9.87e-22 90.9
MS.gene046078.t1 AT1G66380 65.714 70 24 0 78 147 42 111 1.03e-21 89.4
MS.gene046078.t1 AT3G09230 56.338 71 31 0 80 150 88 158 1.36e-21 94.4
MS.gene046078.t1 AT4G33450 49.383 81 41 0 72 152 44 124 3.20e-21 90.9
MS.gene046078.t1 AT1G17950 57.143 70 30 0 79 148 37 106 3.70e-21 90.9
MS.gene046078.t1 AT1G56650 47.368 114 56 2 78 189 42 153 7.46e-21 90.1
MS.gene046078.t1 AT3G27785 42.857 98 49 2 79 175 221 312 1.30e-20 92.0
MS.gene046078.t1 AT1G69560 54.412 68 31 0 80 147 140 207 1.65e-20 90.5
MS.gene046078.t1 AT1G66390 64.286 70 25 0 78 147 42 111 1.67e-20 89.0
MS.gene046078.t1 AT1G69560 54.412 68 31 0 80 147 156 223 1.84e-20 90.5
MS.gene046078.t1 AT4G37260 53.623 69 32 0 79 147 45 113 1.91e-20 90.1
MS.gene046078.t1 AT1G26780 54.412 68 31 0 80 147 131 198 3.06e-20 89.0
MS.gene046078.t1 AT1G26780 53.623 69 32 0 79 147 130 198 3.64e-20 90.1
MS.gene046078.t1 AT5G49620 40.141 142 60 3 78 205 60 190 3.79e-20 89.4
MS.gene046078.t1 AT2G25230 50.000 72 34 1 80 151 59 128 4.11e-20 87.8
MS.gene046078.t1 AT5G67300 54.412 68 31 0 80 147 39 106 1.15e-19 87.8
MS.gene046078.t1 AT3G55730 37.903 124 62 2 80 188 89 212 1.19e-19 89.0
MS.gene046078.t1 AT5G11510 54.412 68 31 0 80 147 114 181 1.23e-19 89.7
MS.gene046078.t1 AT5G11510 54.412 68 31 0 80 147 114 181 1.23e-19 89.7
MS.gene046078.t1 AT5G11510 54.412 68 31 0 80 147 114 181 1.23e-19 89.7
MS.gene046078.t1 AT2G39880 31.847 157 96 2 1 150 1 153 1.28e-19 88.6
MS.gene046078.t1 AT3G60460 54.167 72 32 1 78 148 45 116 1.29e-19 87.4
MS.gene046078.t1 AT5G40360 49.254 67 34 0 80 146 191 257 1.48e-19 88.2
MS.gene046078.t1 AT5G11510 54.412 68 31 0 80 147 114 181 1.62e-19 89.4
MS.gene046078.t1 AT5G11510 54.412 68 31 0 80 147 114 181 1.73e-19 89.4
MS.gene046078.t1 AT5G02320 37.419 155 81 5 80 229 160 303 2.27e-19 89.0
MS.gene046078.t1 AT5G02320 37.419 155 81 5 80 229 160 303 2.27e-19 89.0
MS.gene046078.t1 AT5G02320 37.419 155 81 5 80 229 100 243 2.51e-19 88.6
MS.gene046078.t1 AT4G18770 40.000 85 49 1 65 147 233 317 2.87e-19 87.8
MS.gene046078.t1 AT2G23290 52.941 68 32 0 80 147 46 113 3.44e-19 86.7
MS.gene046078.t1 AT5G17800 35.659 129 67 2 53 171 89 211 4.24e-19 86.3
MS.gene046078.t1 AT2G26950 41.489 94 50 2 78 168 50 141 4.97e-19 87.0
MS.gene046078.t1 AT3G09370 34.722 144 82 2 80 223 176 307 6.93e-19 87.4
MS.gene046078.t1 AT3G09370 34.722 144 82 2 80 223 168 299 7.42e-19 87.0
MS.gene046078.t1 AT3G09370 34.722 144 82 2 80 223 163 294 7.83e-19 87.0
MS.gene046078.t1 AT3G50060 43.373 83 47 0 80 162 39 121 8.02e-19 85.5
MS.gene046078.t1 AT1G73410 58.824 68 28 0 80 147 39 106 1.36e-18 83.6
MS.gene046078.t1 AT1G73410 57.971 69 29 0 79 147 38 106 1.79e-18 82.4
MS.gene046078.t1 AT5G58850 44.118 68 38 0 80 147 138 205 4.88e-18 84.3
MS.gene046078.t1 AT4G32730 50.000 68 34 0 80 147 120 187 7.57e-18 84.7
MS.gene046078.t1 AT4G32730 50.000 68 34 0 80 147 120 187 7.57e-18 84.7
MS.gene046078.t1 AT4G32730 50.000 68 34 0 80 147 120 187 7.57e-18 84.7
MS.gene046078.t1 AT4G32730 50.000 68 34 0 80 147 120 187 7.57e-18 84.7
MS.gene046078.t1 AT4G32730 50.000 68 34 0 80 147 120 187 8.48e-18 84.3
MS.gene046078.t1 AT3G29020 48.529 68 35 0 80 147 98 165 1.45e-17 80.5
MS.gene046078.t1 AT3G29020 48.529 68 35 0 80 147 100 167 1.75e-17 81.6
MS.gene046078.t1 AT5G11050 44.118 68 38 0 80 147 138 205 1.90e-17 82.8
MS.gene046078.t1 AT1G18960 46.341 82 38 2 76 153 39 118 1.08e-16 79.3
MS.gene046078.t1 AT5G40430 44.444 72 38 1 80 151 86 155 1.27e-16 78.6
MS.gene046078.t1 AT4G00540 48.529 68 35 0 80 147 139 206 3.19e-16 79.0
MS.gene046078.t1 AT4G00540 48.529 68 35 0 80 147 137 204 4.65e-16 78.6
MS.gene046078.t1 AT2G37630 41.053 95 50 1 78 166 38 132 6.59e-16 77.8
MS.gene046078.t1 AT5G39700 44.578 83 36 1 80 152 89 171 4.36e-15 72.8
MS.gene046078.t1 AT5G59780 59.574 47 19 0 102 148 1 47 2.85e-14 70.1
MS.gene046078.t1 AT3G46130 59.574 47 19 0 102 148 1 47 4.33e-14 70.1
MS.gene046078.t1 AT4G25560 60.000 45 18 0 103 147 3 47 2.07e-12 65.9
MS.gene046078.t1 AT1G14350 40.260 77 46 0 80 156 58 134 3.50e-12 67.0
MS.gene046078.t1 AT1G14350 40.260 77 46 0 80 156 58 134 3.50e-12 67.0
MS.gene046078.t1 AT2G02820 40.260 77 46 0 80 156 63 139 4.78e-12 66.6
MS.gene046078.t1 AT2G02820 40.260 77 46 0 80 156 63 139 5.10e-12 66.6
MS.gene046078.t1 AT2G02820 40.260 77 46 0 80 156 63 139 5.29e-12 65.9

Find 68 sgRNAs with CRISPR-Local

Find 218 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCACTTCTTTGGATGATTT+TGG 0.164698 4.4:+56635075 MS.gene046078:CDS
TTGAGGAGTAATTTGGTAAT+TGG 0.211329 4.4:-56634965 None:intergenic
AGATCACAATTCCACTTCTT+TGG 0.250501 4.4:+56635065 MS.gene046078:CDS
GGCCATTGGTGTCTGAGATT+TGG 0.260126 4.4:-56634996 None:intergenic
ATTTCACTAGATGATGAAAA+TGG 0.273660 4.4:-56635027 None:intergenic
GATGATGAAAATGGGGATAA+AGG 0.281197 4.4:-56635018 None:intergenic
TGACAAAACTTTCGGTAGTA+TGG 0.284671 4.4:-56635182 None:intergenic
AACTGGATTGAGGAGTAATT+TGG 0.303507 4.4:-56634972 None:intergenic
TAGTATATGACAAGGATATT+TGG 0.309668 4.4:+56635349 MS.gene046078:CDS
GCCATTGGTGTCTGAGATTT+GGG 0.312832 4.4:-56634995 None:intergenic
TTTGTCATGGATAATGATTT+TGG 0.329855 4.4:+56635198 MS.gene046078:CDS
GGCTGTGTTGACAAATTTGC+AGG 0.339160 4.4:+56632778 MS.gene046078:CDS
ACTTCATTATCTGTTCTTCC+AGG 0.339491 4.4:-56634832 None:intergenic
TTAGGTGGCTGAATTATCTT+AGG 0.343554 4.4:+56634707 MS.gene046078:CDS
GCTATTCACGTAGCCTTTGC+AGG 0.360218 4.4:+56632757 MS.gene046078:CDS
ATTATCCATGACAAAACTTT+CGG 0.398726 4.4:-56635190 None:intergenic
ATGATGAAAATGGGGATAAA+GGG 0.400273 4.4:-56635017 None:intergenic
TGCAGGCTTTGCAATTTGCC+AGG 0.402403 4.4:+56632795 MS.gene046078:CDS
GAAAAGATTCTTGTGTGGTC+AGG 0.417431 4.4:-56632867 None:intergenic
GGACGGTACAACACTTTGCC+AGG 0.433653 4.4:-56632837 None:intergenic
TTTCACTAGATGATGAAAAT+GGG 0.434641 4.4:-56635026 None:intergenic
GGTGTCTGAGATTTGGGAAC+TGG 0.438068 4.4:-56634989 None:intergenic
CACTGTTCCACTTGGTGTGT+TGG 0.443864 4.4:-56635154 None:intergenic
TGAACGGCGGCGGCGTTTGA+CGG 0.462453 4.4:+56632398 MS.gene046078:CDS
ACCATTGCGGCTGAGTTACC+TGG 0.472325 4.4:+56634814 MS.gene046078:CDS
GAGATTTGGGAACTGGATTG+AGG 0.491808 4.4:-56634982 None:intergenic
ACCAAAATCATCCAAAGAAG+TGG 0.496803 4.4:-56635076 None:intergenic
CTTAGGCCTAATATCAAAAG+AGG 0.501825 4.4:+56634724 MS.gene046078:CDS
AGGGACATGTCAACTTCATA+TGG 0.517144 4.4:-56635273 None:intergenic
GCAGGCTTTGCAATTTGCCA+GGG 0.519971 4.4:+56632796 MS.gene046078:CDS
GCGGCGGTGATGAACGGCGG+CGG 0.520718 4.4:+56632388 MS.gene046078:CDS
AGATTCATTTATAGAAGATG+TGG 0.523349 4.4:+56635104 MS.gene046078:CDS
TTTCAGGTCTTTCAAGGTGT+GGG 0.533782 4.4:+56634671 MS.gene046078:intron
ATTTCAGGTCTTTCAAGGTG+TGG 0.533848 4.4:+56634670 MS.gene046078:intron
TCTTCAGAGAAGTGTGCCAA+TGG 0.538235 4.4:-56634861 None:intergenic
CAGGCTTTGCAATTTGCCAG+GGG 0.549060 4.4:+56632797 MS.gene046078:CDS
TCCAGGTAACTCAGCCGCAA+TGG 0.554818 4.4:-56634815 None:intergenic
ATAATGAAGTGAAGAACCAT+TGG 0.556377 4.4:+56634845 MS.gene046078:CDS
GGATATATCTCTCCCTTGTG+TGG 0.558281 4.4:-56634944 None:intergenic
GCGGCGGCGTTTGACGGTGA+AGG 0.560242 4.4:+56632404 MS.gene046078:CDS
GTGGGAAGAGTTGTAGACTT+AGG 0.560267 4.4:+56634689 MS.gene046078:CDS
AAAGGTATCAGTAGTTCAGT+TGG 0.561036 4.4:-56635300 None:intergenic
AAACTTTACTCAACAAGAAG+AGG 0.563987 4.4:+56634747 MS.gene046078:CDS
CGGCGTTTGACGGTGAAGGA+AGG 0.564993 4.4:+56632408 MS.gene046078:CDS
CTTGTGTGGTCAGGAAATGC+AGG 0.565100 4.4:-56632858 None:intergenic
TGAACGGCGGCGGTGATGAA+CGG 0.572498 4.4:+56632382 MS.gene046078:CDS
AAATGGGGATAAAGGGCCAT+TGG 0.578413 4.4:-56635010 None:intergenic
GACGGTACAACACTTTGCCA+GGG 0.583673 4.4:-56632836 None:intergenic
AATCTTTCCAACACACCAAG+TGG 0.595510 4.4:+56635147 MS.gene046078:CDS
ACTACTGATACCTTTGTCGA+TGG 0.606426 4.4:+56635308 MS.gene046078:CDS
TTTGTCAACACAGCCTGCAA+AGG 0.610375 4.4:-56632770 None:intergenic
TTCACTAGATGATGAAAATG+GGG 0.623589 4.4:-56635025 None:intergenic
GATTAGAAAAGATTCTTGTG+TGG 0.623688 4.4:-56632872 None:intergenic
GAAGTAACAAACCTGATGAA+CGG 0.637470 4.4:+56632366 None:intergenic
GCAACCCCTCACAAATGTCG+TGG 0.637554 4.4:-56632906 None:intergenic
ACAAACCTGATGAACGGCGG+CGG 0.640621 4.4:+56632372 None:intergenic
GGAATTGTGATCTAAAGATG+TGG 0.642475 4.4:-56635055 None:intergenic
TCAGTAGTTCAGTTGGAACG+AGG 0.643508 4.4:-56635293 None:intergenic
GAATAGATGGTCAACCATTG+CGG 0.644939 4.4:+56634801 MS.gene046078:CDS
GACATAATTGAATCCACACA+AGG 0.645918 4.4:+56634931 MS.gene046078:CDS
TCCCAAATCTCAGACACCAA+TGG 0.651151 4.4:+56634994 MS.gene046078:CDS
CAGTAGTTCAGTTGGAACGA+GGG 0.652480 4.4:-56635292 None:intergenic
ACGGTACAACACTTTGCCAG+GGG 0.666174 4.4:-56632835 None:intergenic
GGAAGAGTTGTAGACTTAGG+TGG 0.671039 4.4:+56634692 MS.gene046078:CDS
TGTGGTCAGGAAATGCAGGA+CGG 0.707096 4.4:-56632854 None:intergenic
ACATAATTGAATCCACACAA+GGG 0.713140 4.4:+56634932 MS.gene046078:CDS
ACGGCGGCGGTGATGAACGG+CGG 0.720162 4.4:+56632385 MS.gene046078:CDS
GTAACAAACCTGATGAACGG+CGG 0.759201 4.4:+56632369 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTATAAATAAGAC+CGG + chr4.4:56633243-56633262 MS.gene046078:intron 10.0%
!! AATGTATTATTATAACAACT+TGG + chr4.4:56633862-56633881 MS.gene046078:intron 15.0%
!! TAAATATATGTTTATAAGTG+TGG + chr4.4:56633503-56633522 MS.gene046078:intron 15.0%
!!! AAAGGTATAATAAAATTAAG+CGG + chr4.4:56633373-56633392 MS.gene046078:intron 15.0%
!!! AAATAGTATGTATTTCTTTT+TGG + chr4.4:56633921-56633940 MS.gene046078:intron 15.0%
!!! AAATCTAAGTAAACTTTTTT+TGG - chr4.4:56633672-56633691 None:intergenic 15.0%
!!! TATACAAGACAAATATTTTT+AGG - chr4.4:56633806-56633825 None:intergenic 15.0%
!! AATAATAAACTTTACAATCC+AGG - chr4.4:56633725-56633744 None:intergenic 20.0%
!! GAAAATCAAATATGATTACA+AGG - chr4.4:56633352-56633371 None:intergenic 20.0%
!! TGATAAATTACAAAGCTAAA+AGG + chr4.4:56634016-56634035 MS.gene046078:intron 20.0%
!! TTTAAAGAAATTATAGCCAT+TGG - chr4.4:56633841-56633860 None:intergenic 20.0%
!!! AATCATATTTGATTTTCCAA+AGG + chr4.4:56633355-56633374 MS.gene046078:intron 20.0%
!!! ATTTGACTATTTTTAGTACA+AGG + chr4.4:56634150-56634169 MS.gene046078:intron 20.0%
!!! GCTTAATTTTATTATACCTT+TGG - chr4.4:56633374-56633393 None:intergenic 20.0%
!!! TTAGATTTTGTTTGTTTTGA+GGG + chr4.4:56633684-56633703 MS.gene046078:intron 20.0%
!!! TTTTTCTATAGTATATGACA+AGG + chr4.4:56635341-56635360 MS.gene046078:CDS 20.0%
! AAATTACAAAGCTAAAAGGA+AGG + chr4.4:56634020-56634039 MS.gene046078:intron 25.0%
! AATTACAAAGCTAAAAGGAA+GGG + chr4.4:56634021-56634040 MS.gene046078:intron 25.0%
! ACAAAAACTTATTGCTAAGA+TGG + chr4.4:56634410-56634429 MS.gene046078:intron 25.0%
! AGATTCATTTATAGAAGATG+TGG + chr4.4:56635104-56635123 MS.gene046078:CDS 25.0%
! ATAATAGGAGTCAATGATAA+GGG - chr4.4:56634222-56634241 None:intergenic 25.0%
! ATTATCCATGACAAAACTTT+CGG - chr4.4:56635193-56635212 None:intergenic 25.0%
! ATTTCACTAGATGATGAAAA+TGG - chr4.4:56635030-56635049 None:intergenic 25.0%
! GTATAATAAAATTAAGCGGT+TGG + chr4.4:56633377-56633396 MS.gene046078:intron 25.0%
! TAGTATATGACAAGGATATT+TGG + chr4.4:56635349-56635368 MS.gene046078:CDS 25.0%
! TATAATAGGAGTCAATGATA+AGG - chr4.4:56634223-56634242 None:intergenic 25.0%
! TATATTTACCTGCAAACTTA+GGG - chr4.4:56634551-56634570 None:intergenic 25.0%
! TTTCACTAGATGATGAAAAT+GGG - chr4.4:56635029-56635048 None:intergenic 25.0%
! TTTGCTAAATTATACTCCTT+CGG + chr4.4:56633109-56633128 MS.gene046078:intron 25.0%
!! AAATTGTAAGTTCTAACCAT+TGG - chr4.4:56633896-56633915 None:intergenic 25.0%
!! AAGTTTCCTCTTTTGATATT+AGG - chr4.4:56634733-56634752 None:intergenic 25.0%
!! TGACCATAAATTTTATCTCA+AGG - chr4.4:56634615-56634634 None:intergenic 25.0%
!! TTTGTCATGGATAATGATTT+TGG + chr4.4:56635198-56635217 MS.gene046078:CDS 25.0%
!! TTTTGTGGAGAGTAATTTTT+GGG + chr4.4:56632554-56632573 MS.gene046078:intron 25.0%
!! TTTTTATAAATAAGACCGGA+GGG + chr4.4:56633247-56633266 MS.gene046078:intron 25.0%
!!! AATCAACAGTTGATAGTTTT+TGG + chr4.4:56635244-56635263 MS.gene046078:CDS 25.0%
!!! ATTGCATTGTTTTTGATTTC+AGG + chr4.4:56634655-56634674 MS.gene046078:intron 25.0%
!!! CTTAGATTTTGTTTGTTTTG+AGG + chr4.4:56633683-56633702 MS.gene046078:intron 25.0%
!!! GGGATAATTTTTTTTTTACC+TGG + chr4.4:56633704-56633723 MS.gene046078:intron 25.0%
!!! TATATTAGCTTTCAAACCAA+TGG + chr4.4:56633822-56633841 MS.gene046078:intron 25.0%
!!! TTTTTTATAAATAAGACCGG+AGG + chr4.4:56633246-56633265 MS.gene046078:intron 25.0%
AAACTTTACTCAACAAGAAG+AGG + chr4.4:56634747-56634766 MS.gene046078:CDS 30.0%
ACATAATTGAATCCACACAA+GGG + chr4.4:56634932-56634951 MS.gene046078:CDS 30.0%
AGAAATGCGTGAATTTGAAT+AGG - chr4.4:56633057-56633076 None:intergenic 30.0%
ATAAAAAGCTTGGGAATAGA+TGG + chr4.4:56634788-56634807 MS.gene046078:CDS 30.0%
ATAATGAAGTGAAGAACCAT+TGG + chr4.4:56634845-56634864 MS.gene046078:CDS 30.0%
ATCAGAATGCATAAAAAGCT+TGG + chr4.4:56634778-56634797 MS.gene046078:CDS 30.0%
ATGATGAAAATGGGGATAAA+GGG - chr4.4:56635020-56635039 None:intergenic 30.0%
ATTGCTTATGTCACTAGATA+TGG + chr4.4:56634504-56634523 MS.gene046078:intron 30.0%
CAGGTAAATATAGAACTTTG+CGG + chr4.4:56634559-56634578 MS.gene046078:intron 30.0%
CATCGCATAAATGATGTATT+TGG - chr4.4:56633204-56633223 None:intergenic 30.0%
CCAACATGTTCTACTATAAT+AGG - chr4.4:56634237-56634256 None:intergenic 30.0%
CCTATTATAGTAGAACATGT+TGG + chr4.4:56634234-56634253 MS.gene046078:intron 30.0%
CCTCCTTGAGATAAAATTTA+TGG + chr4.4:56634609-56634628 MS.gene046078:intron 30.0%
CTATATTTACCTGCAAACTT+AGG - chr4.4:56634552-56634571 None:intergenic 30.0%
GAAAGTCAATATGGTCATAA+TGG + chr4.4:56633951-56633970 MS.gene046078:intron 30.0%
GAAATGCGTGAATTTGAATA+GGG - chr4.4:56633056-56633075 None:intergenic 30.0%
GATTAGAAAAGATTCTTGTG+TGG - chr4.4:56632875-56632894 None:intergenic 30.0%
GGACTAAAAGAAAGTCAATA+TGG + chr4.4:56633942-56633961 MS.gene046078:intron 30.0%
TCAGAATGCATAAAAAGCTT+GGG + chr4.4:56634779-56634798 MS.gene046078:CDS 30.0%
TTCACTAGATGATGAAAATG+GGG - chr4.4:56635028-56635047 None:intergenic 30.0%
TTGCTAAATTATACTCCTTC+GGG + chr4.4:56633110-56633129 MS.gene046078:intron 30.0%
! AAGATGTGGATGAAAGTTTT+TGG + chr4.4:56635118-56635137 MS.gene046078:CDS 30.0%
! AAGCTTTTTAGATGCTTACA+AGG + chr4.4:56635221-56635240 MS.gene046078:CDS 30.0%
! CCATAAATTTTATCTCAAGG+AGG - chr4.4:56634612-56634631 None:intergenic 30.0%
! CTTTTGTGGAGAGTAATTTT+TGG + chr4.4:56632553-56632572 MS.gene046078:intron 30.0%
! TTGAGGAGTAATTTGGTAAT+TGG - chr4.4:56634968-56634987 None:intergenic 30.0%
! TTTGTGGAGAGTAATTTTTG+GGG + chr4.4:56632555-56632574 MS.gene046078:intron 30.0%
!! AAAATTAAGCGGTTGGTAAA+GGG + chr4.4:56633384-56633403 MS.gene046078:intron 30.0%
!! AAGGTTTTCGAGACTTTTAT+TGG + chr4.4:56633441-56633460 MS.gene046078:intron 30.0%
!! TAAAATTAAGCGGTTGGTAA+AGG + chr4.4:56633383-56633402 MS.gene046078:intron 30.0%
!!! TTTTGATTTCAGGTCTTTCA+AGG + chr4.4:56634665-56634684 MS.gene046078:intron 30.0%
AACTGGATTGAGGAGTAATT+TGG - chr4.4:56634975-56634994 None:intergenic 35.0%
AAGAAATCTTGCATATTGCC+AGG - chr4.4:56633011-56633030 None:intergenic 35.0%
AATGATACCCTATTACGTCT+TGG - chr4.4:56633615-56633634 None:intergenic 35.0%
ACCAAAATCATCCAAAGAAG+TGG - chr4.4:56635079-56635098 None:intergenic 35.0%
ACCAAGAAGTCTTTATGTTC+AGG - chr4.4:56633469-56633488 None:intergenic 35.0%
ACTTCATTATCTGTTCTTCC+AGG - chr4.4:56634835-56634854 None:intergenic 35.0%
AGAAATCTTGCATATTGCCA+GGG - chr4.4:56633010-56633029 None:intergenic 35.0%
AGATCACAATTCCACTTCTT+TGG + chr4.4:56635065-56635084 MS.gene046078:CDS 35.0%
ATTTCAGTCACAACACTTAG+AGG - chr4.4:56632617-56632636 None:intergenic 35.0%
CCAAGAAGTCTTTATGTTCA+GGG - chr4.4:56633468-56633487 None:intergenic 35.0%
CGAGTGGTATAAATTCAAGT+AGG + chr4.4:56634285-56634304 MS.gene046078:intron 35.0%
CTAAGAGATGAGAGCTATAT+TGG - chr4.4:56634349-56634368 None:intergenic 35.0%
CTTAGGCCTAATATCAAAAG+AGG + chr4.4:56634724-56634743 MS.gene046078:CDS 35.0%
GACATAATTGAATCCACACA+AGG + chr4.4:56634931-56634950 MS.gene046078:CDS 35.0%
GATGATGAAAATGGGGATAA+AGG - chr4.4:56635021-56635040 None:intergenic 35.0%
GCTTTGTAATTTATCACGTG+TGG - chr4.4:56634012-56634031 None:intergenic 35.0%
GGAATTGTGATCTAAAGATG+TGG - chr4.4:56635058-56635077 None:intergenic 35.0%
GTGTTGTGACTGAAATGAAA+TGG + chr4.4:56632621-56632640 MS.gene046078:intron 35.0%
TGACAAAACTTTCGGTAGTA+TGG - chr4.4:56635185-56635204 None:intergenic 35.0%
TGTATAGATGCAATTTGCCA+GGG + chr4.4:56632662-56632681 MS.gene046078:intron 35.0%
TTAGGTGGCTGAATTATCTT+AGG + chr4.4:56634707-56634726 MS.gene046078:CDS 35.0%
TTCTTCTAAATAAGACCCGA+AGG - chr4.4:56633128-56633147 None:intergenic 35.0%
TTGTATAGATGCAATTTGCC+AGG + chr4.4:56632661-56632680 MS.gene046078:intron 35.0%
! AGAGAAAAGCTGAAGCTTTT+AGG + chr4.4:56632508-56632527 MS.gene046078:intron 35.0%
! GAGAAAAGCTGAAGCTTTTA+GGG + chr4.4:56632509-56632528 MS.gene046078:intron 35.0%
! TCCACTTCTTTGGATGATTT+TGG + chr4.4:56635075-56635094 MS.gene046078:CDS 35.0%
! TTTTCTGATTCCATCGACAA+AGG - chr4.4:56635321-56635340 None:intergenic 35.0%
!! AAAGGTATCAGTAGTTCAGT+TGG - chr4.4:56635303-56635322 None:intergenic 35.0%
!! AATTTTTCCTGTTAGCTTCG+TGG + chr4.4:56634049-56634068 MS.gene046078:intron 35.0%
!! ATTCCACTTTTGTCACAAGA+AGG - chr4.4:56634444-56634463 None:intergenic 35.0%
!! CAACTTGGTTTTCTAACCAA+TGG + chr4.4:56633877-56633896 MS.gene046078:intron 35.0%
!! CTGAAGCTTTTAGGGATTTT+AGG + chr4.4:56632517-56632536 MS.gene046078:intron 35.0%
!! TACTACCGAAAGTTTTGTCA+TGG + chr4.4:56635185-56635204 MS.gene046078:CDS 35.0%
AAACCACGCGGATATAAACA+AGG - chr4.4:56633577-56633596 None:intergenic 40.0%
AATCTTTCCAACACACCAAG+TGG + chr4.4:56635147-56635166 MS.gene046078:CDS 40.0%
ACGTGAATAGCCTGTATTGT+AGG - chr4.4:56632748-56632767 None:intergenic 40.0%
ACTACTGATACCTTTGTCGA+TGG + chr4.4:56635308-56635327 MS.gene046078:CDS 40.0%
ACTCCTTCTTGTGACAAAAG+TGG + chr4.4:56634438-56634457 MS.gene046078:intron 40.0%
AGGGACATGTCAACTTCATA+TGG - chr4.4:56635276-56635295 None:intergenic 40.0%
ATGTCACTAGATATGGTTGC+TGG + chr4.4:56634511-56634530 MS.gene046078:intron 40.0%
CACATCATTCCAAAAGCTCA+TGG - chr4.4:56633414-56633433 None:intergenic 40.0%
CAGTTACATGTTATTCCCTC+CGG - chr4.4:56633265-56633284 None:intergenic 40.0%
CCCTGAACATAAAGACTTCT+TGG + chr4.4:56633465-56633484 MS.gene046078:intron 40.0%
CGTGAATAGCCTGTATTGTA+GGG - chr4.4:56632747-56632766 None:intergenic 40.0%
CTAGATATGGTTGCTGGAAT+TGG + chr4.4:56634517-56634536 MS.gene046078:intron 40.0%
CTTCAATGCTTAAAACCACG+CGG - chr4.4:56633589-56633608 None:intergenic 40.0%
CTTGTGACAAAAGTGGAATG+AGG + chr4.4:56634445-56634464 MS.gene046078:intron 40.0%
GAAAAGATTCTTGTGTGGTC+AGG - chr4.4:56632870-56632889 None:intergenic 40.0%
GAAGAGACCAAGACGTAATA+GGG + chr4.4:56633605-56633624 MS.gene046078:intron 40.0%
GAATAGATGGTCAACCATTG+CGG + chr4.4:56634801-56634820 MS.gene046078:CDS 40.0%
GACAAAAGTGGAATGAGGAA+AGG + chr4.4:56634450-56634469 MS.gene046078:intron 40.0%
GTATAGATGCAATTTGCCAG+GGG + chr4.4:56632663-56632682 MS.gene046078:intron 40.0%
TACAAAGCTAAAAGGAAGGG+TGG + chr4.4:56634024-56634043 MS.gene046078:intron 40.0%
TCATTTCAGCCCTACAATAC+AGG + chr4.4:56632735-56632754 MS.gene046078:intron 40.0%
TGAAGAGACCAAGACGTAAT+AGG + chr4.4:56633604-56633623 MS.gene046078:intron 40.0%
TTATCTTCCACGAAGCTAAC+AGG - chr4.4:56634059-56634078 None:intergenic 40.0%
! ATGAGTTGACTAAAGCTCTG+TGG - chr4.4:56632719-56632738 None:intergenic 40.0%
! ATTTCAGGTCTTTCAAGGTG+TGG + chr4.4:56634670-56634689 MS.gene046078:intron 40.0%
! ATTTTGCCACGACATTTGTG+AGG + chr4.4:56632900-56632919 MS.gene046078:intron 40.0%
! GTGAAGAAGAGAGTCTTTTG+TGG + chr4.4:56632539-56632558 MS.gene046078:intron 40.0%
! GTTTTGTATGTGAAAGCGAG+TGG + chr4.4:56634269-56634288 MS.gene046078:intron 40.0%
! TGGAATGATGTGTGGGTTAA+AGG + chr4.4:56633422-56633441 MS.gene046078:intron 40.0%
! TGGTTTTTCACTGTTCCACT+TGG - chr4.4:56635165-56635184 None:intergenic 40.0%
! TTTCAGGTCTTTCAAGGTGT+GGG + chr4.4:56634671-56634690 MS.gene046078:intron 40.0%
! TTTTGCCACGACATTTGTGA+GGG + chr4.4:56632901-56632920 MS.gene046078:intron 40.0%
!!! AAGGGTATTCCATGAGCTTT+TGG + chr4.4:56633402-56633421 MS.gene046078:intron 40.0%
!!! AATTTGCCAGGGGTTTTTTG+TGG + chr4.4:56632807-56632826 MS.gene046078:CDS 40.0%
!!! GAGCTTTTGGAATGATGTGT+GGG + chr4.4:56633415-56633434 MS.gene046078:intron 40.0%
!!! TGAGCTTTTGGAATGATGTG+TGG + chr4.4:56633414-56633433 MS.gene046078:intron 40.0%
AAACTCCTGGCAAATTTGCC+AGG - chr4.4:56632933-56632952 None:intergenic 45.0%
AAATGGGGATAAAGGGCCAT+TGG - chr4.4:56635013-56635032 None:intergenic 45.0%
AACTCCTGGCAAATTTGCCA+GGG - chr4.4:56632932-56632951 None:intergenic 45.0%
AGTTGACTAAAGCTCTGTGG+CGG - chr4.4:56632716-56632735 None:intergenic 45.0%
CAGTAGTTCAGTTGGAACGA+GGG - chr4.4:56635295-56635314 None:intergenic 45.0%
CCTTCCTTCATTCTTTCCAG+CGG - chr4.4:56632487-56632506 None:intergenic 45.0%
GAGATTTGGGAACTGGATTG+AGG - chr4.4:56634985-56635004 None:intergenic 45.0%
GGAAGAGTTGTAGACTTAGG+TGG + chr4.4:56634692-56634711 MS.gene046078:CDS 45.0%
GGATATATCTCTCCCTTGTG+TGG - chr4.4:56634947-56634966 None:intergenic 45.0%
GTGGAATGAGGAAAGGAACA+TGG + chr4.4:56634457-56634476 MS.gene046078:intron 45.0%
GTGGGAAGAGTTGTAGACTT+AGG + chr4.4:56634689-56634708 MS.gene046078:CDS 45.0%
TCAGTAGTTCAGTTGGAACG+AGG - chr4.4:56635296-56635315 None:intergenic 45.0%
TCCCAAATCTCAGACACCAA+TGG + chr4.4:56634994-56635013 MS.gene046078:CDS 45.0%
TTTGCCACGACATTTGTGAG+GGG + chr4.4:56632902-56632921 MS.gene046078:intron 45.0%
TTTGTCAACACAGCCTGCAA+AGG - chr4.4:56632773-56632792 None:intergenic 45.0%
! AATTTGCCAGGAGTTTTCCC+TGG + chr4.4:56632937-56632956 MS.gene046078:intron 45.0%
! CATGGACTGCTGAAGAAGAT+AGG + chr4.4:56634475-56634494 MS.gene046078:intron 45.0%
! GCCATTGGTGTCTGAGATTT+GGG - chr4.4:56634998-56635017 None:intergenic 45.0%
! GGCTGTGTTGACAAATTTGC+AGG + chr4.4:56632778-56632797 MS.gene046078:CDS 45.0%
! TCTTCAGAGAAGTGTGCCAA+TGG - chr4.4:56634864-56634883 None:intergenic 45.0%
AATTTGCCAGGAGCTATGCC+AGG - chr4.4:56632958-56632977 None:intergenic 50.0%
AATTTGCCAGGGGTTATCCG+AGG + chr4.4:56632673-56632692 MS.gene046078:intron 50.0%
ACGGTACAACACTTTGCCAG+GGG - chr4.4:56632838-56632857 None:intergenic 50.0%
ACTCCTGGCAAATTTGCCAG+GGG - chr4.4:56632931-56632950 None:intergenic 50.0%
ATTTGCCAGGAGCTATGCCA+GGG - chr4.4:56632957-56632976 None:intergenic 50.0%
ATTTGCCAGGGGTTATCCGA+GGG + chr4.4:56632674-56632693 MS.gene046078:intron 50.0%
CAGGCTTTGCAATTTGCCAG+GGG + chr4.4:56632797-56632816 MS.gene046078:CDS 50.0%
CCGCTGGAAAGAATGAAGGA+AGG + chr4.4:56632484-56632503 MS.gene046078:intron 50.0%
CGACAACTCCCTAAGTTTGC+AGG + chr4.4:56634540-56634559 MS.gene046078:intron 50.0%
CTTGTGTGGTCAGGAAATGC+AGG - chr4.4:56632861-56632880 None:intergenic 50.0%
GACGGTACAACACTTTGCCA+GGG - chr4.4:56632839-56632858 None:intergenic 50.0%
GCAGGCTTTGCAATTTGCCA+GGG + chr4.4:56632796-56632815 MS.gene046078:CDS 50.0%
GCTATTCACGTAGCCTTTGC+AGG + chr4.4:56632757-56632776 MS.gene046078:CDS 50.0%
GCTCTTGACAGAGTGAAGGA+AGG + chr4.4:56632438-56632457 MS.gene046078:intron 50.0%
GGAAGAGAACAGCTGAAGGA+AGG + chr4.4:56632459-56632478 MS.gene046078:intron 50.0%
GGAAGGAAGAGAACAGCTGA+AGG + chr4.4:56632455-56632474 MS.gene046078:intron 50.0%
GTAGTCCTGGCAAATTTGCC+AGG - chr4.4:56632970-56632989 None:intergenic 50.0%
GTTGTGCCACAAAAAACCCC+TGG - chr4.4:56632816-56632835 None:intergenic 50.0%
TAGCTCCTGGCAAATTTGCC+AGG + chr4.4:56632962-56632981 MS.gene046078:intron 50.0%
TGCAGGCTTTGCAATTTGCC+AGG + chr4.4:56632795-56632814 MS.gene046078:CDS 50.0%
TGTGGTCAGGAAATGCAGGA+CGG - chr4.4:56632857-56632876 None:intergenic 50.0%
! GGCCATTGGTGTCTGAGATT+TGG - chr4.4:56634999-56635018 None:intergenic 50.0%
! GGTGTCTGAGATTTGGGAAC+TGG - chr4.4:56634992-56635011 None:intergenic 50.0%
!! CACTGTTCCACTTGGTGTGT+TGG - chr4.4:56635157-56635176 None:intergenic 50.0%
!! GCGGTATTGACTTGAGACCT+GGG + chr4.4:56634578-56634597 MS.gene046078:intron 50.0%
!! GTGCCTTGTTTATATCCGCG+TGG + chr4.4:56633571-56633590 MS.gene046078:intron 50.0%
!! TGCGGTATTGACTTGAGACC+TGG + chr4.4:56634577-56634596 MS.gene046078:intron 50.0%
!!! GTTTTTTGTGGCACAACCCC+TGG + chr4.4:56632819-56632838 MS.gene046078:CDS 50.0%
ACCATTGCGGCTGAGTTACC+TGG + chr4.4:56634814-56634833 MS.gene046078:CDS 55.0%
ATGCCAGGAGCAAGTAGTCC+TGG - chr4.4:56632983-56633002 None:intergenic 55.0%
CAGCGCTCTTGACAGAGTGA+AGG + chr4.4:56632434-56632453 MS.gene046078:intron 55.0%
GCAACCCCTCACAAATGTCG+TGG - chr4.4:56632909-56632928 None:intergenic 55.0%
GCTATGCCAGGGAAAACTCC+TGG - chr4.4:56632946-56632965 None:intergenic 55.0%
GGACGGTACAACACTTTGCC+AGG - chr4.4:56632840-56632859 None:intergenic 55.0%
GGCACCGCTGGAAAGAATGA+AGG + chr4.4:56632480-56632499 MS.gene046078:intron 55.0%
TATTGCCAGGGAGCAATGCC+AGG - chr4.4:56632998-56633017 None:intergenic 55.0%
TCCAGGTAACTCAGCCGCAA+TGG - chr4.4:56634818-56634837 None:intergenic 55.0%
TTGCCAGGACTACTTGCTCC+TGG + chr4.4:56632977-56632996 MS.gene046078:intron 55.0%
TTGCCCCTGGCAAATTTGCC+AGG + chr4.4:56632925-56632944 MS.gene046078:intron 55.0%
! GTTTTCCCTGGCATAGCTCC+TGG + chr4.4:56632949-56632968 MS.gene046078:intron 55.0%
AAGCTCTGTGGCGGTTTGCC+AGG - chr4.4:56632707-56632726 None:intergenic 60.0%
AGCTCTGTGGCGGTTTGCCA+GGG - chr4.4:56632706-56632725 None:intergenic 60.0%
CATTTGTGAGGGGTTGCCCC+TGG + chr4.4:56632912-56632931 MS.gene046078:intron 60.0%
CGGCGTTTGACGGTGAAGGA+AGG + chr4.4:56632408-56632427 MS.gene046078:CDS 60.0%
TGAACGGCGGCGGTGATGAA+CGG + chr4.4:56632382-56632401 MS.gene046078:CDS 60.0%
TTGCTCCTGGCATTGCTCCC+TGG + chr4.4:56632990-56633009 MS.gene046078:intron 60.0%
! TCAAGGAGGAGCACACTCCC+AGG - chr4.4:56634598-56634617 None:intergenic 60.0%
CAAGGCCCTCGGATAACCCC+TGG - chr4.4:56632682-56632701 None:intergenic 65.0%
GCTCTGTGGCGGTTTGCCAG+GGG - chr4.4:56632705-56632724 None:intergenic 65.0%
TGAACGGCGGCGGCGTTTGA+CGG + chr4.4:56632398-56632417 MS.gene046078:CDS 65.0%
TTATCCGAGGGCCTTGCCCC+TGG + chr4.4:56632686-56632705 MS.gene046078:intron 65.0%
TTTGCCAGGGGCAAGGCCCT+CGG - chr4.4:56632693-56632712 None:intergenic 65.0%
!! CAGCTGAAGGAAGGCACCGC+TGG + chr4.4:56632468-56632487 MS.gene046078:intron 65.0%
ACGGCGGCGGTGATGAACGG+CGG + chr4.4:56632385-56632404 MS.gene046078:CDS 70.0%
GCGGCGGCGTTTGACGGTGA+AGG + chr4.4:56632404-56632423 MS.gene046078:CDS 70.0%
GTGGCGGTTTGCCAGGGGCA+AGG - chr4.4:56632700-56632719 None:intergenic 70.0%
GCGGCGGTGATGAACGGCGG+CGG + chr4.4:56632388-56632407 MS.gene046078:CDS 75.0%


Chromosome Type Strat End Strand Name
chr4.4 gene 56632381 56635377 56632381 ID=MS.gene046078
chr4.4 mRNA 56632381 56635377 56632381 ID=MS.gene046078.t1;Parent=MS.gene046078
chr4.4 exon 56632381 56632449 56632381 ID=MS.gene046078.t1.exon1;Parent=MS.gene046078.t1
chr4.4 CDS 56632381 56632449 56632381 ID=cds.MS.gene046078.t1;Parent=MS.gene046078.t1
chr4.4 exon 56632757 56632916 56632757 ID=MS.gene046078.t1.exon2;Parent=MS.gene046078.t1
chr4.4 CDS 56632757 56632916 56632757 ID=cds.MS.gene046078.t1;Parent=MS.gene046078.t1
chr4.4 exon 56634677 56635377 56634677 ID=MS.gene046078.t1.exon3;Parent=MS.gene046078.t1
chr4.4 CDS 56634677 56635377 56634677 ID=cds.MS.gene046078.t1;Parent=MS.gene046078.t1
Gene Sequence

>MS.gene046078

ATGAACGGCGGCGGTGATGAACGGCGGCGGCGTTTGACGGTGAAGGAAGGATGCAGCGCTCTTGACAGAGTGAAGGAAGGAAGAGAACAGCTGAAGGAAGGCACCGCTGGAAAGAATGAAGGAAGGAAGAGAAAAGCTGAAGCTTTTAGGGATTTTAGGTGAAGAAGAGAGTCTTTTGTGGAGAGTAATTTTTGGGGTTTATGTTCGTTCTCTGTTAAGAAGAGAAATTTTTTCCTCTAAGTGTTGTGACTGAAATGAAATGGAACGATTCTCTAAATGATTGTATAGATGCAATTTGCCAGGGGTTATCCGAGGGCCTTGCCCCTGGCAAACCGCCACAGAGCTTTAGTCAACTCATTTCAGCCCTACAATACAGGCTATTCACGTAGCCTTTGCAGGCTGTGTTGACAAATTTGCAGGCTTTGCAATTTGCCAGGGGTTTTTTGTGGCACAACCCCTGGCAAAGTGTTGTACCGTCCTGCATTTCCTGACCACACAAGAATCTTTTCTAATCAAGACATTTTGCCACGACATTTGTGAGGGGTTGCCCCTGGCAAATTTGCCAGGAGTTTTCCCTGGCATAGCTCCTGGCAAATTTGCCAGGACTACTTGCTCCTGGCATTGCTCCCTGGCAATATGCAAGATTTCTTGTAGTGAAATATATCTTATTAACCCTATTCAAATTCACGCATTTCTTATATATAATGCATTTGAAGATTTATTGTTTCTTTGCTAAATTATACTCCTTCGGGTCTTATTTAGAAGAAAAAGTTGATTTTTAGATTCATTGAGAAATTGATGTATATATCTAGAATATAGACCAAATACATCATTTATGCGATGAATCAAAAAAGTAAAATGTTTTTTTTTTATAAATAAGACCGGAGGGAATAACATGTAACTGATAGTGACACTATTGTTATTTAATTAATAATATTATAATTATATTTGTCAAAAAATAAATAAAACCTTGTAATCATATTTGATTTTCCAAAGGTATAATAAAATTAAGCGGTTGGTAAAGGGTATTCCATGAGCTTTTGGAATGATGTGTGGGTTAAAGGTTTTCGAGACTTTTATTGGTCCCTGAACATAAAGACTTCTTGGTTGTGTATATCGACGTAAATATATGTTTATAAGTGTGGATATTATGATATTCATCTCAGTTTTGTTAAAGAAATATAATATATGTGCCTTGTTTATATCCGCGTGGTTTTAAGCATTGAAGAGACCAAGACGTAATAGGGTATCATTTGAGAACAAAATATAACGTTTAAAATTTATTTTTCCAAAAAAAGTTTACTTAGATTTTGTTTGTTTTGAGGGATAATTTTTTTTTTACCTGGATTGTAAAGTTTATTATTTCATGTAAAATAAAATTTGATAATAAAAATAATTTTGTCTTGTATATTAGCTTTCAAACCTAAAAATATTTGTCTTGTATATTAGCTTTCAAACCAATGGCTATAATTTCTTTAAAAAATGTATTATTATAACAACTTGGTTTTCTAACCAATGGTTAGAACTTACAATTTCTTTAAAATAGTATGTATTTCTTTTTGGACTAAAAGAAAGTCAATATGGTCATAATGGCTTGACTGTTATTTTGTTTGTCATTAGTAGATTTGCCACACGTGATAAATTACAAAGCTAAAAGGAAGGGTGGCAAATTTTTCCTGTTAGCTTCGTGGAAGATAAGTAGCATGTAAGTGATAGTGACACTATTGTTATTTACTCTTTTTAATGTGAAAAGAAACAAGAAACACGAAATTTGACTATTTTTAGTACAAGGCATAAAGAGCAGTTATTTTATTACTATTAGTATCTACTGAGAAAGACCCTTATCATTGACTCCTATTATAGTAGAACATGTTGGAATATGAAACACGTTTTGTATGTGAAAGCGAGTGGTATAAATTCAAGTAGGACTATGCTCTGACACAAAGAAACAAAGTACAAACAAGACCAATATAGCTCTCATCTCTTAGAGACAAACACACTCACTCATTGAGTTGAGTTCACTTGTTTAACAAAAACTTATTGCTAAGATGGCAAGAACTCCTTCTTGTGACAAAAGTGGAATGAGGAAAGGAACATGGACTGCTGAAGAAGATAGGAAATTAATTGCTTATGTCACTAGATATGGTTGCTGGAATTGGCGACAACTCCCTAAGTTTGCAGGTAAATATAGAACTTTGCGGTATTGACTTGAGACCTGGGAGTGTGCTCCTCCTTGAGATAAAATTTATGGTCAAATAACAAAATTTACTCACTATTGCATTGTTTTTGATTTCAGGTCTTTCAAGGTGTGGGAAGAGTTGTAGACTTAGGTGGCTGAATTATCTTAGGCCTAATATCAAAAGAGGAAACTTTACTCAACAAGAAGAGGAGTTGATTATCAGAATGCATAAAAAGCTTGGGAATAGATGGTCAACCATTGCGGCTGAGTTACCTGGAAGAACAGATAATGAAGTGAAGAACCATTGGCACACTTCTCTGAAGAAGAGAGCTATAGATAACATAGTCACGAATGAAGAAACGAAATCAAAAGACATAATTGAATCCACACAAGGGAGAGATATATCCAATTACCAAATTACTCCTCAATCCAGTTCCCAAATCTCAGACACCAATGGCCCTTTATCCCCATTTTCATCATCTAGTGAAATCACTTCCACATCTTTAGATCACAATTCCACTTCTTTGGATGATTTTGGTTTTCTAGATTCATTTATAGAAGATGTGGATGAAAGTTTTTGGCTTCATAATCTTTCCAACACACCAAGTGGAACAGTGAAAAACCATACTACCGAAAGTTTTGTCATGGATAATGATTTTGGAAGCTTTTTAGATGCTTACAAGGAATCAACAGTTGATAGTTTTTGGACACAACCATATGAAGTTGACATGTCCCTCGTTCCAACTGAACTACTGATACCTTTGTCGATGGAATCAGAAAATTTTTCTATAGTATATGACAAGGATATTTGGAGTTGA
Protein sequence

>MS.gene046078.t1

MNGGGDERRRRLTVKEGCSALDRAIHVAFAGCVDKFAGFAICQGFFVAQPLAKCCTVLHFLTTQESFLIKTFCHDICLSRCGKSCRLRWLNYLRPNIKRGNFTQQEEELIIRMHKKLGNRWSTIAAELPGRTDNEVKNHWHTSLKKRAIDNIVTNEETKSKDIIESTQGRDISNYQITPQSSSQISDTNGPLSPFSSSSEITSTSLDHNSTSLDDFGFLDSFIEDVDESFWLHNLSNTPSGTVKNHTTESFVMDNDFGSFLDAYKESTVDSFWTQPYEVDMSLVPTELLIPLSMESENFSIVYDKDIWS