AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene046080

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene046080.t1 MTR_0251s0050 77.003 287 39 1 1 287 13 272 1.20e-151 425
MS.gene046080.t1 MTR_0008s0470 71.821 291 66 5 1 287 13 291 6.46e-135 383
MS.gene046080.t1 MTR_0008s0390 69.097 288 60 5 1 287 13 272 2.31e-132 376
MS.gene046080.t1 MTR_2g089420 44.211 285 126 8 1 255 11 292 3.56e-70 224
MS.gene046080.t1 MTR_2g089450 67.460 126 41 0 1 126 12 137 2.44e-61 195
MS.gene046080.t1 MTR_7g115650 59.375 128 52 0 1 128 12 139 2.33e-53 173
MS.gene046080.t1 MTR_1g076150 46.667 195 94 3 1 195 12 196 1.47e-51 170
MS.gene046080.t1 MTR_1g043080 48.438 192 84 5 1 191 12 189 1.95e-51 169
MS.gene046080.t1 MTR_7g096930 59.091 132 50 1 1 132 12 139 8.25e-51 169
MS.gene046080.t1 MTR_0008s0280 67.647 102 33 0 2 103 13 114 2.24e-50 166
MS.gene046080.t1 MTR_1g043050 66.667 105 35 0 1 105 12 116 3.39e-49 164
MS.gene046080.t1 MTR_1g085640 40.594 202 118 1 1 202 12 211 1.08e-48 166
MS.gene046080.t1 MTR_1g100653 65.714 105 36 0 1 105 12 116 1.77e-48 163
MS.gene046080.t1 MTR_1g085040 54.887 133 52 1 1 125 12 144 2.23e-48 165
MS.gene046080.t1 MTR_3g077110 47.853 163 83 2 1 161 12 174 7.25e-48 163
MS.gene046080.t1 MTR_4g082290 67.619 105 34 0 1 105 12 116 7.74e-48 164
MS.gene046080.t1 MTR_0063s0090 42.786 201 103 4 1 191 12 210 9.64e-48 159
MS.gene046080.t1 MTR_1g112760 61.905 105 40 0 1 105 13 117 1.88e-47 158
MS.gene046080.t1 MTR_4g091490 64.762 105 37 0 1 105 13 117 2.59e-47 162
MS.gene046080.t1 MTR_3g074520 61.905 105 40 0 1 105 12 116 2.93e-47 161
MS.gene046080.t1 MTR_2g011660 64.762 105 37 0 1 105 13 117 4.15e-47 161
MS.gene046080.t1 MTR_4g105130 62.857 105 39 0 1 105 12 116 6.64e-47 161
MS.gene046080.t1 MTR_7g110830 51.773 141 57 1 1 130 12 152 7.95e-47 160
MS.gene046080.t1 MTR_4g478180 52.206 136 50 2 1 121 13 148 1.48e-46 160
MS.gene046080.t1 MTR_2g089620 59.167 120 49 0 1 120 12 131 2.91e-46 158
MS.gene046080.t1 MTR_4g125520 64.762 105 37 0 1 105 12 116 5.87e-46 157
MS.gene046080.t1 MTR_8g027345 63.063 111 41 0 1 111 12 122 6.49e-46 157
MS.gene046080.t1 MTR_3g097450 65.049 103 36 0 3 105 14 116 7.28e-46 156
MS.gene046080.t1 MTR_7g011170 64.762 105 37 0 1 105 12 116 7.32e-46 157
MS.gene046080.t1 MTR_4g082230 64.762 105 37 0 1 105 12 116 9.40e-46 159
MS.gene046080.t1 MTR_4g073420 45.732 164 83 2 3 161 14 176 1.23e-45 155
MS.gene046080.t1 MTR_8g017500 58.559 111 46 0 1 111 12 122 1.52e-45 157
MS.gene046080.t1 MTR_6g012690 63.810 105 38 0 1 105 12 116 2.45e-45 157
MS.gene046080.t1 MTR_8g017440 52.273 132 56 1 1 125 12 143 2.65e-45 156
MS.gene046080.t1 MTR_7g117730 61.468 109 42 0 1 109 12 120 4.67e-45 153
MS.gene046080.t1 MTR_2g064160 60.000 105 42 0 1 105 11 115 8.61e-45 154
MS.gene046080.t1 MTR_5g029840 62.857 105 39 0 1 105 12 116 8.75e-45 154
MS.gene046080.t1 MTR_2g099740 60.952 105 41 0 1 105 12 116 1.30e-44 156
MS.gene046080.t1 MTR_4g102380 60.952 105 41 0 1 105 12 116 2.05e-44 152
MS.gene046080.t1 MTR_8g017540 60.000 105 42 0 1 105 58 162 2.07e-44 155
MS.gene046080.t1 MTR_8g095390 62.136 103 39 0 3 105 14 116 2.28e-44 153
MS.gene046080.t1 MTR_7g076740 62.264 106 39 1 1 105 12 117 2.93e-44 152
MS.gene046080.t1 MTR_5g007370 58.095 105 44 0 1 105 12 116 3.68e-44 152
MS.gene046080.t1 MTR_4g121460 61.905 105 40 0 1 105 12 116 4.49e-44 153
MS.gene046080.t1 MTR_8g031360 62.264 106 39 1 1 105 13 118 4.57e-44 152
MS.gene046080.t1 MTR_2g067420 64.646 99 35 0 1 99 14 112 6.04e-44 152
MS.gene046080.t1 MTR_2g097910 61.905 105 40 0 1 105 20 124 6.90e-44 152
MS.gene046080.t1 MTR_4g100720 59.633 109 44 0 1 109 13 121 7.23e-44 147
MS.gene046080.t1 MTR_5g078140 60.000 105 42 0 1 105 12 116 8.93e-44 152
MS.gene046080.t1 MTR_3g083540 60.952 105 41 0 1 105 41 145 1.17e-43 151
MS.gene046080.t1 MTR_4g485530 62.136 103 39 0 3 105 14 116 1.56e-43 147
MS.gene046080.t1 MTR_3g461490 60.000 105 42 0 1 105 12 116 2.64e-43 150
MS.gene046080.t1 MTR_3g028740 61.905 105 40 0 1 105 22 126 4.70e-43 150
MS.gene046080.t1 MTR_7g010210 56.522 115 50 0 1 115 12 126 4.84e-43 150
MS.gene046080.t1 MTR_3g065440 59.048 105 43 0 1 105 12 116 5.54e-43 149
MS.gene046080.t1 MTR_5g079670 59.048 105 43 0 1 105 11 115 5.54e-43 146
MS.gene046080.t1 MTR_7g010210 56.522 115 50 0 1 115 12 126 5.71e-43 148
MS.gene046080.t1 MTR_1g100667 62.500 104 39 0 2 105 14 117 6.59e-43 148
MS.gene046080.t1 MTR_8g017390 60.748 107 39 2 1 105 12 117 7.92e-43 152
MS.gene046080.t1 MTR_1g110460 55.200 125 53 1 1 125 26 147 9.12e-43 149
MS.gene046080.t1 MTR_7g111290 63.265 98 36 0 1 98 12 109 1.42e-42 150
MS.gene046080.t1 MTR_6g055910 55.738 122 44 1 2 123 15 126 1.44e-42 147
MS.gene046080.t1 MTR_4g065017 60.000 105 42 0 1 105 17 121 1.85e-42 148
MS.gene046080.t1 MTR_6g009430 59.048 105 43 0 1 105 12 116 2.87e-42 148
MS.gene046080.t1 MTR_1g017000 56.604 106 45 1 1 105 12 117 3.33e-42 145
MS.gene046080.t1 MTR_8g098860 58.095 105 44 0 1 105 12 116 3.56e-42 147
MS.gene046080.t1 MTR_2g034790 60.000 105 42 0 1 105 12 116 3.76e-42 147
MS.gene046080.t1 MTR_5g042030 60.000 105 42 0 1 105 7 111 4.42e-42 146
MS.gene046080.t1 MTR_1g062940 61.905 105 40 0 1 105 6 110 8.28e-42 144
MS.gene046080.t1 MTR_7g035075 55.085 118 53 0 1 118 14 131 1.41e-41 142
MS.gene046080.t1 MTR_5g079290 60.000 105 42 0 1 105 17 121 2.96e-41 143
MS.gene046080.t1 MTR_0197s0010 54.237 118 54 0 5 122 5 122 3.07e-41 142
MS.gene046080.t1 MTR_8g017340 56.637 113 46 2 1 111 12 123 3.12e-41 149
MS.gene046080.t1 MTR_5g010020 59.596 99 40 0 1 99 12 110 6.52e-41 144
MS.gene046080.t1 MTR_3g011610 51.200 125 61 0 1 125 37 161 6.78e-41 148
MS.gene046080.t1 MTR_7g017260 51.799 139 56 3 1 137 25 154 8.16e-41 142
MS.gene046080.t1 MTR_0140s0030 55.046 109 49 0 1 109 13 121 1.58e-40 143
MS.gene046080.t1 MTR_0489s0020 55.046 109 49 0 1 109 13 121 1.58e-40 143
MS.gene046080.t1 MTR_6g006030 55.085 118 50 1 1 115 14 131 1.80e-40 140
MS.gene046080.t1 MTR_8g017350 55.752 113 47 2 1 111 12 123 2.02e-40 148
MS.gene046080.t1 MTR_7g087130 57.547 106 45 0 1 106 12 117 2.60e-40 143
MS.gene046080.t1 MTR_1g073170 60.194 103 41 0 2 104 21 123 2.89e-40 140
MS.gene046080.t1 MTR_5g078910 60.000 105 42 0 1 105 7 111 3.04e-40 142
MS.gene046080.t1 MTR_1g045610 55.932 118 51 1 2 119 22 138 5.17e-40 140
MS.gene046080.t1 MTR_8g042410 58.654 104 43 0 1 104 37 140 7.84e-40 145
MS.gene046080.t1 MTR_3g052430 57.692 104 44 0 1 104 41 144 9.23e-40 145
MS.gene046080.t1 MTR_5g078930 46.154 156 72 2 2 149 10 161 9.66e-40 138
MS.gene046080.t1 MTR_5g079220 59.048 105 43 0 1 105 21 125 9.87e-40 140
MS.gene046080.t1 MTR_5g079120 46.405 153 71 2 1 149 61 206 1.08e-39 140
MS.gene046080.t1 MTR_3g039990 52.991 117 48 1 1 110 13 129 1.10e-39 140
MS.gene046080.t1 MTR_0001s0360 60.000 105 42 0 1 105 7 111 1.42e-39 139
MS.gene046080.t1 MTR_5g078950 60.784 102 40 0 1 102 7 108 1.53e-39 139
MS.gene046080.t1 MTR_3g052450 56.731 104 45 0 1 104 40 143 2.10e-39 144
MS.gene046080.t1 MTR_0193s0090 44.068 177 85 4 1 173 7 173 2.22e-39 137
MS.gene046080.t1 MTR_4g057635 56.604 106 45 1 1 105 12 117 3.16e-39 140
MS.gene046080.t1 MTR_8g060940 61.386 101 39 0 1 101 7 107 4.39e-39 137
MS.gene046080.t1 MTR_5g078800 60.000 105 42 0 1 105 7 111 4.72e-39 138
MS.gene046080.t1 MTR_5g078860 59.048 105 43 0 1 105 7 111 4.94e-39 139
MS.gene046080.t1 MTR_1g017140 55.660 106 46 1 1 105 12 117 4.98e-39 140
MS.gene046080.t1 MTR_6g012180 59.596 99 40 0 1 99 12 110 5.37e-39 139
MS.gene046080.t1 MTR_5g014990 56.604 106 45 1 1 105 12 117 6.01e-39 139
MS.gene046080.t1 MTR_8g020490 57.282 103 44 0 3 105 10 112 7.67e-39 137
MS.gene046080.t1 MTR_1g021230 48.062 129 67 0 1 129 57 185 8.31e-39 141
MS.gene046080.t1 MTR_7g102110 56.604 106 45 1 1 105 12 117 8.78e-39 137
MS.gene046080.t1 MTR_1g086510 49.265 136 60 1 1 136 21 147 1.00e-38 137
MS.gene046080.t1 MTR_3g103570 56.604 106 45 1 1 105 12 117 1.01e-38 139
MS.gene046080.t1 MTR_1g086530 56.190 105 46 0 1 105 33 137 1.92e-38 136
MS.gene046080.t1 MTR_4g063100 58.252 103 43 0 2 104 8 110 2.92e-38 135
MS.gene046080.t1 MTR_2g096380 42.667 150 83 1 1 147 6 155 4.60e-38 134
MS.gene046080.t1 MTR_0247s0040 57.843 102 43 0 1 102 7 108 1.12e-37 132
MS.gene046080.t1 MTR_2g095520 58.000 100 41 1 1 99 12 111 2.78e-37 134
MS.gene046080.t1 MTR_6g090405 57.143 105 44 1 1 104 12 116 3.05e-37 133
MS.gene046080.t1 MTR_7g109320 60.952 105 41 0 1 105 12 116 4.02e-37 135
MS.gene046080.t1 MTR_4g097570 56.566 99 42 1 1 98 12 110 2.08e-36 132
MS.gene046080.t1 MTR_4g128670 57.000 100 42 1 1 99 12 111 2.44e-35 130
MS.gene046080.t1 MTR_4g097570 56.000 100 42 2 1 98 12 111 2.45e-35 129
MS.gene046080.t1 MTR_2g088170 55.769 104 46 0 1 104 29 132 2.95e-35 132
MS.gene046080.t1 MTR_5g062790 52.427 103 48 1 2 103 10 112 2.90e-34 126
MS.gene046080.t1 MTR_2g033170 55.238 105 47 0 1 105 24 128 5.06e-34 126
MS.gene046080.t1 MTR_5g088080 50.485 103 50 1 2 103 13 115 1.36e-33 124
MS.gene046080.t1 MTR_5g088150 50.485 103 50 1 2 103 13 115 1.36e-33 124
MS.gene046080.t1 MTR_5g488210 50.485 103 50 1 2 103 13 115 1.36e-33 124
MS.gene046080.t1 MTR_5g088640 50.485 103 50 1 2 103 13 115 1.63e-33 124
MS.gene046080.t1 MTR_5g488170 50.485 103 50 1 2 103 13 115 4.56e-33 121
MS.gene046080.t1 MTR_6g055910 57.895 95 30 1 29 123 13 97 1.93e-32 120
MS.gene046080.t1 MTR_4g123040 54.369 103 47 0 1 103 24 126 7.69e-32 120
MS.gene046080.t1 MTR_1g083630 49.524 105 53 0 1 105 12 116 1.73e-31 123
MS.gene046080.t1 MTR_5g088610 49.515 103 51 1 2 103 10 112 2.96e-31 119
MS.gene046080.t1 MTR_3g045430 47.273 110 58 0 1 110 13 122 5.60e-30 115
MS.gene046080.t1 MTR_8g006470 48.077 104 53 1 1 103 10 113 1.47e-29 113
MS.gene046080.t1 MTR_4g063100 65.278 72 25 0 33 104 10 81 1.80e-29 111
MS.gene046080.t1 MTR_7g111290 68.657 67 21 0 32 98 1 67 6.89e-29 113
MS.gene046080.t1 MTR_4g029540 34.759 187 116 5 1 182 10 195 6.94e-29 112
MS.gene046080.t1 MTR_3g101290 49.515 103 51 1 3 105 37 138 1.39e-28 109
MS.gene046080.t1 MTR_2g096380 42.857 119 65 1 32 147 18 136 1.42e-28 109
MS.gene046080.t1 MTR_5g007300 57.143 77 33 0 1 77 64 140 1.49e-28 107
MS.gene046080.t1 MTR_5g070020 47.573 103 51 2 3 104 122 222 1.96e-28 112
MS.gene046080.t1 MTR_5g049190 46.078 102 52 2 3 103 19 118 2.63e-27 106
MS.gene046080.t1 MTR_3g463400 45.631 103 53 2 3 104 133 233 3.21e-27 110
MS.gene046080.t1 MTR_4g019370 39.610 154 84 4 3 155 38 183 5.14e-27 108
MS.gene046080.t1 MTR_4g094982 46.078 102 54 1 3 104 5 105 1.05e-26 105
MS.gene046080.t1 MTR_7g451170 43.137 102 57 1 3 104 191 291 2.21e-26 107
MS.gene046080.t1 MTR_7g037260 45.098 102 55 1 3 104 145 245 2.35e-26 106
MS.gene046080.t1 MTR_5g016510 35.294 170 95 3 3 172 5 159 4.38e-26 105
MS.gene046080.t1 MTR_7g035350 35.915 142 75 2 3 129 225 365 4.41e-26 107
MS.gene046080.t1 MTR_4g128190 35.172 145 70 3 1 134 11 142 4.96e-26 103
MS.gene046080.t1 MTR_6g015455 49.020 102 51 1 3 104 5 105 5.07e-26 108
MS.gene046080.t1 MTR_7g061330 46.729 107 54 2 1 106 111 215 8.37e-26 107
MS.gene046080.t1 MTR_7g461410 46.729 107 54 2 1 106 111 215 8.37e-26 107
MS.gene046080.t1 MTR_7g061330 46.729 107 54 2 1 106 75 179 1.67e-25 105
MS.gene046080.t1 MTR_1g085880 46.789 109 56 2 1 107 11 119 2.27e-25 100
MS.gene046080.t1 MTR_6g074860 47.525 101 52 1 3 103 4 103 6.60e-25 100
MS.gene046080.t1 MTR_1g085770 46.789 109 56 2 1 107 11 119 7.04e-25 101
MS.gene046080.t1 MTR_4g105660 43.689 103 55 2 3 104 180 280 7.39e-25 103
MS.gene046080.t1 MTR_5g041570 40.769 130 74 2 3 131 134 261 1.11e-24 102
MS.gene046080.t1 MTR_4g088015 41.584 101 58 1 3 103 221 320 1.53e-24 102
MS.gene046080.t1 MTR_3g110028 42.308 104 59 1 3 106 85 187 8.72e-24 101
MS.gene046080.t1 MTR_3g110028 33.333 114 74 2 3 115 33 145 4.98e-13 69.7
MS.gene046080.t1 MTR_1g026870 42.453 106 60 1 1 106 83 187 8.77e-24 101
MS.gene046080.t1 MTR_1g026870 31.579 114 76 2 3 115 33 145 4.04e-13 70.1
MS.gene046080.t1 MTR_4g082040 46.602 103 52 2 3 104 105 205 1.20e-23 99.8
MS.gene046080.t1 MTR_3g077650 39.216 102 61 1 3 104 181 281 1.58e-23 99.8
MS.gene046080.t1 MTR_1g057980 37.410 139 69 3 1 124 78 213 3.88e-23 96.7
MS.gene046080.t1 MTR_7g037130 43.878 98 54 1 3 100 145 241 1.15e-22 96.3
MS.gene046080.t1 MTR_6g027340 30.481 187 119 6 3 188 16 192 1.33e-22 93.2
MS.gene046080.t1 MTR_7g450950 38.053 113 66 2 3 112 157 268 2.24e-22 95.1
MS.gene046080.t1 MTR_7g086960 39.597 149 87 3 3 150 89 235 2.83e-22 95.1
MS.gene046080.t1 MTR_3g089045 47.573 103 51 2 3 104 16 116 5.03e-22 93.6
MS.gene046080.t1 MTR_5g082910 41.748 103 51 2 3 101 19 116 1.82e-21 92.0
MS.gene046080.t1 MTR_6g027360 39.048 105 61 2 1 104 76 178 2.96e-21 91.7
MS.gene046080.t1 MTR_0023s0210 50.649 77 38 0 1 77 7 83 8.13e-21 84.7
MS.gene046080.t1 MTR_6g027370 42.157 102 58 1 3 104 99 199 9.25e-21 90.9
MS.gene046080.t1 MTR_5g010650 43.878 98 54 1 1 98 108 204 6.71e-20 89.4
MS.gene046080.t1 MTR_7g061550 41.667 96 54 1 6 99 10 105 6.49e-19 85.9
MS.gene046080.t1 MTR_8g468380 36.429 140 74 3 5 143 24 149 2.35e-16 79.0
MS.gene046080.t1 MTR_6g055910 53.846 65 20 1 59 123 2 56 2.71e-16 76.3
MS.gene046080.t1 MTR_5g038910 37.963 108 64 2 5 111 28 133 4.55e-15 75.5
MS.gene046080.t1 MTR_5g038910 27.826 230 121 8 5 229 28 217 5.11e-15 74.7
MS.gene046080.t1 MTR_4g063100 60.870 46 18 0 59 104 1 46 1.39e-13 68.2
MS.gene046080.t1 MTR_2g096380 35.870 92 56 1 59 147 1 92 7.27e-13 65.9
MS.gene046080.t1 MTR_2g088730 58.974 39 16 0 59 97 34 72 3.35e-11 58.9
MS.gene046080.t1 MTR_1g008970 34.286 105 64 2 36 140 123 222 6.58e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene046080.t1 AT1G06180 46.341 205 95 5 1 205 12 201 1.14e-52 172
MS.gene046080.t1 AT2G31180 46.429 196 88 3 1 195 12 191 4.12e-51 169
MS.gene046080.t1 AT3G23250 45.556 180 96 1 1 180 12 189 2.34e-50 167
MS.gene046080.t1 AT2G16720 55.396 139 54 2 1 131 12 150 3.32e-49 164
MS.gene046080.t1 AT3G13540 40.476 210 94 3 1 190 23 221 1.60e-48 162
MS.gene046080.t1 AT1G22640 45.055 182 82 3 1 175 12 182 2.37e-48 162
MS.gene046080.t1 AT5G16770 64.762 105 37 0 1 105 12 116 6.90e-48 162
MS.gene046080.t1 AT5G16770 64.762 105 37 0 1 105 12 116 6.90e-48 162
MS.gene046080.t1 AT5G16770 64.762 105 37 0 1 105 12 116 1.46e-47 162
MS.gene046080.t1 AT5G16770 64.762 105 37 0 1 105 12 116 1.46e-47 162
MS.gene046080.t1 AT3G02940 63.810 105 38 0 1 105 12 116 1.92e-47 161
MS.gene046080.t1 AT4G28110 64.762 105 37 0 1 105 12 116 1.97e-47 160
MS.gene046080.t1 AT1G16490 57.143 119 51 0 1 119 14 132 2.02e-47 160
MS.gene046080.t1 AT4G01680 55.147 136 50 2 1 125 12 147 2.97e-47 158
MS.gene046080.t1 AT1G79180 62.857 105 39 0 1 105 14 118 3.22e-47 160
MS.gene046080.t1 AT3G02940 63.810 105 38 0 1 105 12 116 4.45e-47 160
MS.gene046080.t1 AT3G02940 63.810 105 38 0 1 105 12 116 4.45e-47 160
MS.gene046080.t1 AT5G14750 53.103 145 57 3 2 146 17 150 6.15e-47 156
MS.gene046080.t1 AT4G38620 53.623 138 60 2 3 139 14 148 8.12e-47 158
MS.gene046080.t1 AT4G21440 62.857 105 39 0 1 105 12 116 8.87e-47 160
MS.gene046080.t1 AT4G05100 64.762 105 37 0 1 105 13 117 1.01e-46 159
MS.gene046080.t1 AT1G74430 61.818 110 42 0 1 110 12 121 1.04e-46 158
MS.gene046080.t1 AT4G01680 55.147 136 50 2 1 125 12 147 1.15e-46 159
MS.gene046080.t1 AT5G54230 63.810 105 38 0 1 105 12 116 1.34e-46 159
MS.gene046080.t1 AT3G61250 63.810 105 38 0 1 105 12 116 1.58e-46 158
MS.gene046080.t1 AT3G01140 65.714 105 36 0 1 105 12 116 2.03e-46 159
MS.gene046080.t1 AT5G10280 61.905 105 40 0 1 105 12 116 2.42e-46 159
MS.gene046080.t1 AT5G15310 64.762 105 37 0 1 105 12 116 3.05e-46 158
MS.gene046080.t1 AT5G15310 64.762 105 37 0 1 105 12 116 3.60e-46 158
MS.gene046080.t1 AT5G15310 64.762 105 37 0 1 105 12 116 4.22e-46 155
MS.gene046080.t1 AT5G26660 62.857 105 39 0 1 105 12 116 4.38e-46 159
MS.gene046080.t1 AT3G01140 65.714 105 36 0 1 105 55 159 4.87e-46 159
MS.gene046080.t1 AT4G17785 55.118 127 56 1 1 126 13 139 6.72e-46 158
MS.gene046080.t1 AT4G17785 55.118 127 56 1 1 126 13 139 6.73e-46 158
MS.gene046080.t1 AT1G09540 48.026 152 71 1 1 144 12 163 6.92e-46 158
MS.gene046080.t1 AT5G65230 61.905 105 40 0 1 105 12 116 2.51e-45 155
MS.gene046080.t1 AT4G12350 42.932 191 100 3 1 188 12 196 6.09e-45 154
MS.gene046080.t1 AT1G35515 60.952 105 41 0 1 105 12 116 7.12e-45 151
MS.gene046080.t1 AT5G60890 58.407 113 47 0 1 113 12 124 7.50e-45 154
MS.gene046080.t1 AT1G57560 50.758 132 57 1 1 124 12 143 7.71e-45 153
MS.gene046080.t1 AT5G40330 63.462 104 38 0 2 105 13 116 9.09e-45 151
MS.gene046080.t1 AT1G18710 59.091 110 45 0 1 110 12 121 9.99e-45 152
MS.gene046080.t1 AT1G34670 51.145 131 64 0 1 131 12 142 1.14e-44 155
MS.gene046080.t1 AT1G57560 60.000 105 42 0 1 105 12 116 1.48e-44 154
MS.gene046080.t1 AT4G09460 61.165 103 40 0 3 105 14 116 1.49e-44 151
MS.gene046080.t1 AT1G56160 60.000 105 42 0 1 105 14 118 1.54e-44 153
MS.gene046080.t1 AT1G18570 55.906 127 53 1 1 127 13 136 1.67e-44 154
MS.gene046080.t1 AT5G56110 61.905 105 40 0 1 105 12 116 2.59e-44 153
MS.gene046080.t1 AT3G27810 41.451 193 108 3 1 189 20 211 3.11e-44 150
MS.gene046080.t1 AT4G34990 63.107 103 38 0 3 105 14 116 4.02e-44 151
MS.gene046080.t1 AT5G07700 60.952 105 41 0 1 105 12 116 4.95e-44 153
MS.gene046080.t1 AT5G07700 60.952 105 41 0 1 105 12 116 4.95e-44 153
MS.gene046080.t1 AT3G27920 61.538 104 40 0 2 105 15 118 7.12e-44 149
MS.gene046080.t1 AT3G13890 60.000 105 42 0 1 105 12 116 7.95e-44 153
MS.gene046080.t1 AT5G07690 61.165 103 40 0 1 103 12 114 9.41e-44 152
MS.gene046080.t1 AT5G61420 60.000 105 42 0 1 105 12 116 1.06e-43 152
MS.gene046080.t1 AT1G74080 63.107 103 38 0 1 103 12 114 2.46e-43 151
MS.gene046080.t1 AT4G01680 50.336 149 51 3 1 126 12 160 3.53e-43 151
MS.gene046080.t1 AT3G12720 55.238 105 47 0 1 105 22 126 4.03e-43 149
MS.gene046080.t1 AT5G12870 61.905 105 40 0 1 105 18 122 4.47e-43 149
MS.gene046080.t1 AT1G66230 46.099 141 68 1 1 133 12 152 5.18e-43 149
MS.gene046080.t1 AT5G62320 41.530 183 93 4 1 171 13 193 6.46e-43 147
MS.gene046080.t1 AT4G22680 59.048 105 43 0 1 105 12 116 8.48e-43 147
MS.gene046080.t1 AT3G08500 60.952 105 41 0 1 105 30 134 1.66e-42 149
MS.gene046080.t1 AT3G62610 60.952 105 41 0 1 105 12 116 2.82e-42 148
MS.gene046080.t1 AT3G12820 58.095 105 44 0 1 105 14 118 3.21e-42 145
MS.gene046080.t1 AT5G16600 58.095 105 44 0 1 105 12 116 4.16e-42 147
MS.gene046080.t1 AT1G08810 43.605 172 90 2 1 172 12 176 7.37e-42 145
MS.gene046080.t1 AT2G47460 51.064 141 64 3 1 141 12 147 8.30e-42 148
MS.gene046080.t1 AT5G35550 60.952 105 41 0 1 105 14 118 8.82e-42 145
MS.gene046080.t1 AT5G14340 56.075 107 47 0 1 107 24 130 9.74e-42 145
MS.gene046080.t1 AT1G74650 59.048 105 43 0 1 105 12 116 1.27e-41 146
MS.gene046080.t1 AT3G47600 58.095 105 44 0 1 105 12 116 1.30e-41 146
MS.gene046080.t1 AT1G63910 57.143 105 45 0 1 105 12 116 1.50e-41 147
MS.gene046080.t1 AT3G28470 62.626 99 37 0 1 99 12 110 1.50e-41 145
MS.gene046080.t1 AT5G40350 41.243 177 97 1 1 177 17 186 1.97e-41 142
MS.gene046080.t1 AT5G49330 60.000 105 42 0 1 105 12 116 2.82e-41 145
MS.gene046080.t1 AT4G26930 40.741 189 87 2 1 164 19 207 4.59e-41 146
MS.gene046080.t1 AT1G79180 47.826 138 39 1 1 105 14 151 5.99e-41 144
MS.gene046080.t1 AT4G13480 58.475 118 48 1 2 119 7 123 6.94e-41 142
MS.gene046080.t1 AT3G11440 57.692 104 44 0 1 104 41 144 7.00e-41 147
MS.gene046080.t1 AT3G13890 55.263 114 42 1 1 105 12 125 8.96e-41 145
MS.gene046080.t1 AT5G62470 58.095 105 44 0 1 105 12 116 1.78e-40 144
MS.gene046080.t1 AT5G06100 57.692 104 44 0 1 104 32 135 2.05e-40 146
MS.gene046080.t1 AT3G11440 57.692 104 44 0 1 104 41 144 2.47e-40 147
MS.gene046080.t1 AT3G11440 57.692 104 44 0 1 104 41 144 2.47e-40 147
MS.gene046080.t1 AT3G11440 57.692 104 44 0 1 104 41 144 2.47e-40 147
MS.gene046080.t1 AT5G52600 61.538 104 40 0 1 104 12 115 3.18e-40 139
MS.gene046080.t1 AT3G24310 55.372 121 53 1 2 122 19 138 3.63e-40 141
MS.gene046080.t1 AT3G28910 57.547 106 45 0 1 106 12 117 3.99e-40 142
MS.gene046080.t1 AT5G55020 60.194 103 41 0 1 103 26 128 4.56e-40 146
MS.gene046080.t1 AT5G57620 57.547 106 44 1 1 105 12 117 5.79e-40 142
MS.gene046080.t1 AT5G06100 57.692 104 44 0 1 104 32 135 6.34e-40 145
MS.gene046080.t1 AT5G06100 57.692 104 44 0 1 104 32 135 6.34e-40 145
MS.gene046080.t1 AT5G06100 57.692 104 44 0 1 104 32 135 6.34e-40 145
MS.gene046080.t1 AT5G06100 57.692 104 44 0 1 104 32 135 6.34e-40 145
MS.gene046080.t1 AT2G32460 56.731 104 45 0 1 104 6 109 1.39e-39 144
MS.gene046080.t1 AT2G32460 56.731 104 45 0 1 104 18 121 1.41e-39 144
MS.gene046080.t1 AT3G48920 58.654 104 43 0 2 105 19 122 1.63e-39 139
MS.gene046080.t1 AT3G49690 52.991 117 54 1 1 116 12 128 1.68e-39 140
MS.gene046080.t1 AT5G23000 56.604 106 45 1 1 105 12 117 2.11e-39 140
MS.gene046080.t1 AT3G01530 55.238 105 47 0 1 105 25 129 2.39e-39 137
MS.gene046080.t1 AT5G62470 58.095 105 43 1 1 105 12 115 5.91e-39 140
MS.gene046080.t1 AT3G30210 50.000 140 65 2 2 141 28 162 8.21e-39 137
MS.gene046080.t1 AT1G66370 45.732 164 75 5 1 164 8 157 8.90e-39 136
MS.gene046080.t1 AT1G25340 39.698 199 104 3 2 187 19 214 1.20e-38 137
MS.gene046080.t1 AT1G48000 42.073 164 78 3 1 164 32 178 1.39e-38 136
MS.gene046080.t1 AT5G65790 51.667 120 57 1 1 119 12 131 1.50e-38 139
MS.gene046080.t1 AT1G68320 51.200 125 58 1 1 125 19 140 2.55e-38 136
MS.gene046080.t1 AT2G36890 55.660 106 46 1 1 105 12 117 9.84e-38 135
MS.gene046080.t1 AT5G52260 60.194 103 41 0 2 104 13 115 1.02e-37 134
MS.gene046080.t1 AT2G26960 57.426 101 43 0 3 103 22 122 1.12e-37 138
MS.gene046080.t1 AT4G37780 53.774 106 48 1 1 105 12 117 1.26e-37 135
MS.gene046080.t1 AT2G36890 55.660 106 46 1 1 105 53 158 1.30e-37 136
MS.gene046080.t1 AT2G47190 53.271 107 50 0 1 107 20 126 1.54e-37 134
MS.gene046080.t1 AT4G25560 58.252 103 43 0 2 104 11 113 2.83e-37 134
MS.gene046080.t1 AT5G59780 55.769 104 46 0 2 105 9 112 1.49e-36 130
MS.gene046080.t1 AT3G46130 55.769 104 46 0 2 105 10 113 1.80e-36 131
MS.gene046080.t1 AT5G14750 52.239 134 44 5 13 146 3 116 2.46e-35 125
MS.gene046080.t1 AT3G53200 51.887 106 51 0 1 106 9 114 5.65e-35 126
MS.gene046080.t1 AT1G66380 56.522 115 50 0 1 115 8 122 1.61e-34 122
MS.gene046080.t1 AT3G06490 55.140 107 48 0 1 107 19 125 3.78e-34 126
MS.gene046080.t1 AT3G27810 39.506 162 93 3 32 189 2 162 4.36e-34 122
MS.gene046080.t1 AT1G25340 38.191 199 102 4 2 187 19 209 5.55e-34 125
MS.gene046080.t1 AT1G25340 38.191 199 102 4 2 187 19 209 1.13e-33 125
MS.gene046080.t1 AT1G66390 59.615 104 42 0 1 104 8 111 1.31e-33 123
MS.gene046080.t1 AT1G56650 50.000 136 57 2 1 136 8 132 1.50e-33 123
MS.gene046080.t1 AT5G49620 56.311 103 45 0 1 103 26 128 1.75e-33 124
MS.gene046080.t1 AT5G35550 67.532 77 25 0 29 105 45 121 9.52e-33 121
MS.gene046080.t1 AT5G26660 68.056 72 23 0 34 105 14 85 6.10e-32 120
MS.gene046080.t1 AT5G40350 39.583 144 80 1 34 177 5 141 1.06e-30 113
MS.gene046080.t1 AT2G26950 50.515 97 48 0 3 99 18 114 1.59e-30 118
MS.gene046080.t1 AT3G47600 55.914 93 37 1 13 105 22 110 2.54e-30 116
MS.gene046080.t1 AT3G60460 48.649 111 54 2 1 108 11 121 6.16e-30 115
MS.gene046080.t1 AT5G49620 49.573 117 45 1 1 103 26 142 7.25e-30 115
MS.gene046080.t1 AT3G12820 66.667 69 23 0 37 105 2 70 1.02e-29 111
MS.gene046080.t1 AT3G46130 63.014 73 27 0 33 105 9 81 6.68e-29 110
MS.gene046080.t1 AT5G59780 63.889 72 26 0 34 105 20 91 1.36e-28 109
MS.gene046080.t1 AT3G46130 63.889 72 26 0 34 105 20 91 1.55e-28 109
MS.gene046080.t1 AT3G53200 61.644 73 28 0 34 106 9 81 1.54e-27 106
MS.gene046080.t1 AT5G11510 44.340 106 58 1 1 106 79 183 7.44e-27 110
MS.gene046080.t1 AT5G11510 33.333 114 74 2 3 115 29 141 5.21e-14 72.8
MS.gene046080.t1 AT5G11510 44.340 106 58 1 1 106 79 183 7.44e-27 110
MS.gene046080.t1 AT5G11510 33.333 114 74 2 3 115 29 141 5.21e-14 72.8
MS.gene046080.t1 AT5G11510 44.340 106 58 1 1 106 79 183 7.44e-27 110
MS.gene046080.t1 AT5G11510 33.333 114 74 2 3 115 29 141 5.21e-14 72.8
MS.gene046080.t1 AT4G18770 44.118 102 56 1 3 104 217 317 9.67e-27 108
MS.gene046080.t1 AT5G11510 44.340 106 58 1 1 106 79 183 1.01e-26 110
MS.gene046080.t1 AT5G11510 33.333 114 74 2 3 115 29 141 5.69e-14 72.4
MS.gene046080.t1 AT3G27785 44.068 118 58 3 3 120 189 298 1.12e-26 108
MS.gene046080.t1 AT5G11510 44.340 106 58 1 1 106 79 183 1.22e-26 109
MS.gene046080.t1 AT5G11510 33.333 114 74 2 3 115 29 141 6.46e-14 72.4
MS.gene046080.t1 AT3G50060 39.416 137 81 2 3 138 6 141 2.03e-26 105
MS.gene046080.t1 AT5G58850 44.660 103 54 2 3 104 105 205 5.87e-26 106
MS.gene046080.t1 AT5G14750 52.000 100 37 3 47 146 1 89 6.78e-26 100
MS.gene046080.t1 AT5G14750 52.000 100 37 3 47 146 1 89 6.78e-26 100
MS.gene046080.t1 AT3G09230 45.690 116 53 3 3 113 55 165 6.92e-26 105
MS.gene046080.t1 AT3G23250 41.045 134 77 1 47 180 1 132 8.28e-26 102
MS.gene046080.t1 AT5G67300 47.059 102 53 1 3 104 6 106 1.18e-25 103
MS.gene046080.t1 AT1G17950 49.515 103 49 2 3 104 5 105 1.71e-25 102
MS.gene046080.t1 AT5G02320 45.192 104 56 1 3 106 127 229 7.01e-25 104
MS.gene046080.t1 AT5G02320 34.783 115 73 2 3 116 75 188 2.28e-13 70.5
MS.gene046080.t1 AT5G02320 45.192 104 56 1 3 106 127 229 7.01e-25 104
MS.gene046080.t1 AT5G02320 34.783 115 73 2 3 116 75 188 2.28e-13 70.5
MS.gene046080.t1 AT1G22640 39.706 136 64 3 47 175 1 125 7.18e-25 99.0
MS.gene046080.t1 AT1G69560 47.573 103 51 2 3 104 107 207 7.49e-25 102
MS.gene046080.t1 AT5G11050 43.689 103 55 2 3 104 105 205 8.53e-25 103
MS.gene046080.t1 AT1G69560 47.573 103 51 2 3 104 123 223 9.52e-25 102
MS.gene046080.t1 AT5G02320 45.192 104 56 1 3 106 67 169 9.75e-25 103
MS.gene046080.t1 AT5G02320 34.783 115 73 2 3 116 15 128 2.84e-13 70.1
MS.gene046080.t1 AT5G40360 44.118 102 54 2 3 103 158 257 1.05e-24 102
MS.gene046080.t1 AT1G66380 65.753 73 25 0 32 104 6 78 1.17e-24 95.9
MS.gene046080.t1 AT4G33450 40.426 141 73 3 2 142 18 147 1.20e-24 99.8
MS.gene046080.t1 AT1G26780 47.573 103 51 2 3 104 98 198 1.47e-24 100
MS.gene046080.t1 AT1G26780 46.667 105 53 2 1 104 96 198 1.49e-24 101
MS.gene046080.t1 AT3G09370 45.283 106 49 2 3 104 135 235 2.73e-24 102
MS.gene046080.t1 AT3G09370 33.333 114 74 2 3 115 83 195 1.13e-11 65.5
MS.gene046080.t1 AT3G09370 45.283 106 49 2 3 104 130 230 2.89e-24 102
MS.gene046080.t1 AT3G09370 33.333 114 74 2 3 115 78 190 1.15e-11 65.1
MS.gene046080.t1 AT3G09370 45.283 106 49 2 3 104 143 243 4.24e-24 102
MS.gene046080.t1 AT3G09370 33.333 114 74 2 3 115 91 203 9.90e-12 65.5
MS.gene046080.t1 AT4G37260 45.098 102 55 1 3 104 13 113 4.53e-24 99.8
MS.gene046080.t1 AT1G73410 50.000 104 49 2 3 105 6 107 1.64e-23 96.7
MS.gene046080.t1 AT3G29020 34.965 143 90 2 3 145 65 204 1.76e-23 96.3
MS.gene046080.t1 AT3G29020 36.220 127 80 1 3 129 67 192 2.26e-23 97.4
MS.gene046080.t1 AT4G32730 41.509 106 61 1 1 106 85 189 2.42e-23 100
MS.gene046080.t1 AT4G32730 32.456 114 75 2 3 115 35 147 3.97e-13 70.1
MS.gene046080.t1 AT4G32730 41.509 106 61 1 1 106 85 189 2.42e-23 100
MS.gene046080.t1 AT4G32730 32.456 114 75 2 3 115 35 147 3.97e-13 70.1
MS.gene046080.t1 AT4G32730 41.509 106 61 1 1 106 85 189 2.42e-23 100
MS.gene046080.t1 AT4G32730 32.456 114 75 2 3 115 35 147 3.97e-13 70.1
MS.gene046080.t1 AT4G32730 41.509 106 61 1 1 106 85 189 2.42e-23 100
MS.gene046080.t1 AT4G32730 32.456 114 75 2 3 115 35 147 3.97e-13 70.1
MS.gene046080.t1 AT4G32730 41.509 106 61 1 1 106 85 189 2.78e-23 100
MS.gene046080.t1 AT4G32730 32.456 114 75 2 3 115 35 147 3.78e-13 70.1
MS.gene046080.t1 AT2G23290 43.689 103 57 1 3 105 13 114 3.69e-23 97.1
MS.gene046080.t1 AT5G17800 38.346 133 79 2 3 133 93 224 3.71e-23 97.1
MS.gene046080.t1 AT1G73410 50.485 103 48 2 3 104 6 106 5.12e-23 94.4
MS.gene046080.t1 AT2G39880 45.283 106 49 2 3 104 50 150 1.21e-22 96.7
MS.gene046080.t1 AT3G55730 34.161 161 86 5 3 146 56 213 1.75e-22 96.3
MS.gene046080.t1 AT1G18960 41.228 114 58 3 3 113 10 117 6.88e-22 93.6
MS.gene046080.t1 AT1G71030 56.061 66 29 0 40 105 5 70 4.30e-21 88.6
MS.gene046080.t1 AT1G66380 57.692 78 33 0 1 78 8 85 5.24e-21 86.3
MS.gene046080.t1 AT1G71030 56.061 66 29 0 40 105 19 84 6.23e-21 88.6
MS.gene046080.t1 AT2G25230 42.453 106 57 3 3 107 26 128 1.08e-20 88.6
MS.gene046080.t1 AT5G39700 41.739 115 60 2 2 113 55 165 7.49e-20 85.5
MS.gene046080.t1 AT2G37630 42.708 96 53 1 6 99 7 102 8.05e-20 88.6
MS.gene046080.t1 AT4G00540 39.640 111 61 3 1 107 101 209 5.94e-18 83.6
MS.gene046080.t1 AT4G00540 33.058 121 73 2 3 115 46 166 2.03e-12 67.4
MS.gene046080.t1 AT4G00540 39.640 111 61 3 1 107 99 207 9.23e-18 83.2
MS.gene046080.t1 AT4G00540 33.058 121 73 2 3 115 44 164 2.48e-12 67.0
MS.gene046080.t1 AT1G14350 35.507 138 79 3 5 141 27 155 2.82e-17 81.6
MS.gene046080.t1 AT1G14350 35.507 138 79 3 5 141 27 155 2.82e-17 81.6
MS.gene046080.t1 AT5G40430 40.385 104 57 4 3 105 54 153 2.91e-17 79.7
MS.gene046080.t1 AT3G18100 33.333 123 76 2 2 124 545 661 4.19e-16 79.0
MS.gene046080.t1 AT3G18100 33.333 123 76 2 2 124 497 613 6.37e-16 78.2
MS.gene046080.t1 AT2G02820 37.963 108 64 2 5 111 32 137 7.23e-16 77.8
MS.gene046080.t1 AT3G18100 33.333 123 76 2 2 124 384 500 7.26e-16 78.2
MS.gene046080.t1 AT2G02820 37.963 108 64 2 5 111 32 137 8.35e-16 77.4
MS.gene046080.t1 AT3G18100 33.333 123 76 2 2 124 332 448 1.06e-15 77.4
MS.gene046080.t1 AT2G02820 38.889 108 63 2 5 111 32 137 1.10e-15 76.3
MS.gene046080.t1 AT5G59780 59.574 47 19 0 59 105 1 47 5.89e-14 68.9
MS.gene046080.t1 AT3G46130 59.574 47 19 0 59 105 1 47 8.03e-14 68.9
MS.gene046080.t1 AT4G25560 60.870 46 18 0 59 104 2 47 5.52e-13 67.0
MS.gene046080.t1 AT1G14350 36.082 97 55 1 45 141 23 112 3.22e-11 63.5
MS.gene046080.t1 AT1G14350 36.082 97 55 1 45 141 23 112 3.22e-11 63.5

Find 51 sgRNAs with CRISPR-Local

Find 71 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATCCGTGGGTGAAAGATTT+TGG 0.173825 4.4:+56583400 MS.gene046080:CDS
CACTATTCCACTTGGTATAT+TGG 0.178190 4.4:-56583433 None:intergenic
ACCACTTATGTGGATGATTT+TGG 0.182493 4.4:+56583357 MS.gene046080:CDS
TGTGATCAACTCTCTTCTTT+AGG 0.212201 4.4:-56583155 None:intergenic
CTTTCATCGCATGAATGATT+TGG 0.226490 4.4:-56583516 None:intergenic
GCCGGTGATGTCTGAGGTTT+TGG 0.267080 4.4:-56583274 None:intergenic
ATTGCTTATGTCACTAGATA+TGG 0.291146 4.4:+56582773 MS.gene046080:CDS
CGCCAACTTCCCAAGTTTGC+AGG 0.293097 4.4:+56582809 MS.gene046080:CDS
GTGATCAACTCTCTTCTTTA+GGG 0.294729 4.4:-56583154 None:intergenic
TAGTATATGATGAGGATATT+TGG 0.326391 4.4:+56583691 MS.gene046080:CDS
ACTTCATTATCTGTTCTTCC+AGG 0.339491 4.4:-56583111 None:intergenic
GATGAAGCAAGTGGTGATAA+AGG 0.340172 4.4:-56583297 None:intergenic
CTAGATATGGTTGCTGGAAT+TGG 0.347558 4.4:+56582786 MS.gene046080:CDS
ACATTGAATCCACAAAAGAT+AGG 0.404787 4.4:+56583214 MS.gene046080:CDS
ATATTAATTACCTGCAAACT+TGG 0.407998 4.4:-56582819 None:intergenic
CATGGACTGCTGAAGAAGAT+AGG 0.410291 4.4:+56582744 MS.gene046080:CDS
ATAATGAAGTGAAGAACTAT+TGG 0.433566 4.4:+56583124 MS.gene046080:CDS
TCCATTGCGGCCGAGTTACC+TGG 0.444960 4.4:+56583093 MS.gene046080:CDS
ATGTCACTAGATATGGTTGC+TGG 0.454705 4.4:+56582780 MS.gene046080:CDS
TCGGCAAAGGTGTCAGCAAT+TGG 0.456772 4.4:-56583647 None:intergenic
TACCTGCAAACTTGGGAAGT+TGG 0.466120 4.4:-56582811 None:intergenic
CTAAGACCTAATATCAAAAG+AGG 0.476128 4.4:+56583003 MS.gene046080:CDS
TCAGCAATTGGCTTGGAACT+TGG 0.483881 4.4:-56583635 None:intergenic
ACCAAAATCATCCACATAAG+TGG 0.485724 4.4:-56583358 None:intergenic
ATCTGTTCTTCCAGGTAACT+CGG 0.488002 4.4:-56583103 None:intergenic
ATGAAGCAAGTGGTGATAAA+GGG 0.492786 4.4:-56583296 None:intergenic
TTTCAGGTCTTTCAAGGTGT+GGG 0.511467 4.4:+56582950 MS.gene046080:intron
TCCAGGTAACTCGGCCGCAA+TGG 0.515613 4.4:-56583094 None:intergenic
ATTTCAGGTCTTTCAAGGTG+TGG 0.520974 4.4:+56582949 MS.gene046080:intron
ATTGCTGACACCTTTGCCGA+TGG 0.525845 4.4:+56583650 MS.gene046080:CDS
TATTAATTACCTGCAAACTT+GGG 0.536627 4.4:-56582818 None:intergenic
CATTGAATCCACAAAAGATA+GGG 0.551489 4.4:+56583215 MS.gene046080:CDS
TTCCACTTGGTATATTGGAA+AGG 0.559070 4.4:-56583428 None:intergenic
AGATCACAGTACCACTTATG+TGG 0.565693 4.4:+56583347 MS.gene046080:CDS
GGAAGAGTTGTAGATTGAGA+TGG 0.566126 4.4:+56582971 MS.gene046080:CDS
TGGAGGAGTAACTTGATGAA+AGG 0.568052 4.4:-56583244 None:intergenic
ATTCCAAAATCTTTCACCCA+CGG 0.569681 4.4:-56583403 None:intergenic
TATTCAGATTCCATCGGCAA+AGG 0.574722 4.4:-56583660 None:intergenic
AAACTTCACTCAACAAGAAG+AGG 0.574927 4.4:+56583026 MS.gene046080:CDS
AAAGGTGTCAGCAATTGGCT+TGG 0.581520 4.4:-56583642 None:intergenic
AGATGAAATTATAGAATCCG+TGG 0.583848 4.4:+56583386 MS.gene046080:CDS
AGCAAGTGGTGATAAAGGGC+CGG 0.591439 4.4:-56583292 None:intergenic
GTGGAATGAGGAAAGGAACA+TGG 0.591827 4.4:+56582726 None:intergenic
TTGTTCTGCACTATTCCACT+TGG 0.600726 4.4:-56583441 None:intergenic
GACCTTTCCAATATACCAAG+TGG 0.602568 4.4:+56583426 MS.gene046080:CDS
TCCAAAACCTCAGACATCAC+CGG 0.627605 4.4:+56583273 MS.gene046080:CDS
GAATAGATGGTCATCCATTG+CGG 0.633326 4.4:+56583080 MS.gene046080:CDS
AATTCACTTGATGAAGCAAG+TGG 0.639681 4.4:-56583306 None:intergenic
GATGAAATTATAGAATCCGT+GGG 0.646480 4.4:+56583387 MS.gene046080:CDS
TAAAGGGCCGGTGATGTCTG+AGG 0.656668 4.4:-56583280 None:intergenic
ACTGTGATCTGAATAATCTG+TGG 0.669958 4.4:-56583334 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATCAAGATACTAATGT+TGG + chr4.4:56583480-56583499 MS.gene046080:CDS 20.0%
!! ATGATGCTTAAAAAAAATTG+TGG + chr4.4:56582882-56582901 MS.gene046080:intron 20.0%
!! GGTAATTAATATATAGAACT+TGG + chr4.4:56582830-56582849 MS.gene046080:intron 20.0%
!!! TTTGTTTTGGATAATGATTT+TGG + chr4.4:56583540-56583559 MS.gene046080:CDS 20.0%
!!! TTTTTCTATAGTATATGATG+AGG + chr4.4:56583683-56583702 MS.gene046080:CDS 20.0%
! ATAATGAAGTGAAGAACTAT+TGG + chr4.4:56583124-56583143 MS.gene046080:CDS 25.0%
! ATATTAATTACCTGCAAACT+TGG - chr4.4:56582822-56582841 None:intergenic 25.0%
! GAAAAATATTCAGATTCCAT+CGG - chr4.4:56583669-56583688 None:intergenic 25.0%
! TAGTATATGATGAGGATATT+TGG + chr4.4:56583691-56583710 MS.gene046080:CDS 25.0%
! TATTAATTACCTGCAAACTT+GGG - chr4.4:56582821-56582840 None:intergenic 25.0%
!! AAGTTTCCTCTTTTGATATT+AGG - chr4.4:56583012-56583031 None:intergenic 25.0%
!!! AGTCAACAATTGATAGTTTT+TGG + chr4.4:56583586-56583605 MS.gene046080:CDS 25.0%
!!! ATTGCATCGTTTTTTATTTC+AGG + chr4.4:56582934-56582953 MS.gene046080:intron 25.0%
!!! TTTTTATTTCAGGTCTTTCA+AGG + chr4.4:56582944-56582963 MS.gene046080:intron 25.0%
AAGTTCAATATCCAAACTTC+AGG - chr4.4:56582857-56582876 None:intergenic 30.0%
ACATTGAATCCACAAAAGAT+AGG + chr4.4:56583214-56583233 MS.gene046080:CDS 30.0%
AGATGAAATTATAGAATCCG+TGG + chr4.4:56583386-56583405 MS.gene046080:CDS 30.0%
ATAAAAAGCTTGGGAATAGA+TGG + chr4.4:56583067-56583086 MS.gene046080:CDS 30.0%
ATTGCTTATGTCACTAGATA+TGG + chr4.4:56582773-56582792 MS.gene046080:CDS 30.0%
CATTGAATCCACAAAAGATA+GGG + chr4.4:56583215-56583234 MS.gene046080:CDS 30.0%
CTAAGACCTAATATCAAAAG+AGG + chr4.4:56583003-56583022 MS.gene046080:CDS 30.0%
GATGAAATTATAGAATCCGT+GGG + chr4.4:56583387-56583406 MS.gene046080:CDS 30.0%
!! GGATTCAATGTCTTTTGATT+TGG - chr4.4:56583205-56583224 None:intergenic 30.0%
!!! ATGCGATGAAAGTTTTGTTT+TGG + chr4.4:56583527-56583546 MS.gene046080:CDS 30.0%
AAACTTCACTCAACAAGAAG+AGG + chr4.4:56583026-56583045 MS.gene046080:CDS 35.0%
AATTCACTTGATGAAGCAAG+TGG - chr4.4:56583309-56583328 None:intergenic 35.0%
ACCAAAATCATCCACATAAG+TGG - chr4.4:56583361-56583380 None:intergenic 35.0%
ACTGTGATCTGAATAATCTG+TGG - chr4.4:56583337-56583356 None:intergenic 35.0%
ACTTCATTATCTGTTCTTCC+AGG - chr4.4:56583114-56583133 None:intergenic 35.0%
ATGAAGCAAGTGGTGATAAA+GGG - chr4.4:56583299-56583318 None:intergenic 35.0%
ATTCCAAAATCTTTCACCCA+CGG - chr4.4:56583406-56583425 None:intergenic 35.0%
CACTATTCCACTTGGTATAT+TGG - chr4.4:56583436-56583455 None:intergenic 35.0%
CTTTCATCGCATGAATGATT+TGG - chr4.4:56583519-56583538 None:intergenic 35.0%
GTGATCAACTCTCTTCTTTA+GGG - chr4.4:56583157-56583176 None:intergenic 35.0%
TCCGAATGCATAAAAAGCTT+GGG + chr4.4:56583058-56583077 MS.gene046080:CDS 35.0%
TGTGATCAACTCTCTTCTTT+AGG - chr4.4:56583158-56583177 None:intergenic 35.0%
TTCCACTTGGTATATTGGAA+AGG - chr4.4:56583431-56583450 None:intergenic 35.0%
TTCCGAATGCATAAAAAGCT+TGG + chr4.4:56583057-56583076 MS.gene046080:CDS 35.0%
! ACCACTTATGTGGATGATTT+TGG + chr4.4:56583357-56583376 MS.gene046080:CDS 35.0%
! GGAAATATCCCTATCTTTTG+TGG - chr4.4:56583226-56583245 None:intergenic 35.0%
! TCCCAAGCTTTTTATGCATT+CGG - chr4.4:56583062-56583081 None:intergenic 35.0%
AGATCACAGTACCACTTATG+TGG + chr4.4:56583347-56583366 MS.gene046080:CDS 40.0%
ATCTGTTCTTCCAGGTAACT+CGG - chr4.4:56583106-56583125 None:intergenic 40.0%
ATGTCACTAGATATGGTTGC+TGG + chr4.4:56582780-56582799 MS.gene046080:CDS 40.0%
CTAGATATGGTTGCTGGAAT+TGG + chr4.4:56582786-56582805 MS.gene046080:CDS 40.0%
GAATAGATGGTCATCCATTG+CGG + chr4.4:56583080-56583099 MS.gene046080:CDS 40.0%
GACCTTTCCAATATACCAAG+TGG + chr4.4:56583426-56583445 MS.gene046080:CDS 40.0%
GATGAAGCAAGTGGTGATAA+AGG - chr4.4:56583300-56583319 None:intergenic 40.0%
GGAAGAGTTGTAGATTGAGA+TGG + chr4.4:56582971-56582990 MS.gene046080:CDS 40.0%
TAGAACTTGGACCTGAAGTT+TGG + chr4.4:56582843-56582862 MS.gene046080:intron 40.0%
TATTCAGATTCCATCGGCAA+AGG - chr4.4:56583663-56583682 None:intergenic 40.0%
TGGAGGAGTAACTTGATGAA+AGG - chr4.4:56583247-56583266 None:intergenic 40.0%
TTGTTCTGCACTATTCCACT+TGG - chr4.4:56583444-56583463 None:intergenic 40.0%
! AATCCGTGGGTGAAAGATTT+TGG + chr4.4:56583400-56583419 MS.gene046080:CDS 40.0%
! ATTTCAGGTCTTTCAAGGTG+TGG + chr4.4:56582949-56582968 MS.gene046080:intron 40.0%
! TTTCAGGTCTTTCAAGGTGT+GGG + chr4.4:56582950-56582969 MS.gene046080:intron 40.0%
TACCTGCAAACTTGGGAAGT+TGG - chr4.4:56582814-56582833 None:intergenic 45.0%
TCCAAAACCTCAGACATCAC+CGG + chr4.4:56583273-56583292 MS.gene046080:CDS 45.0%
! CATGGACTGCTGAAGAAGAT+AGG + chr4.4:56582744-56582763 MS.gene046080:CDS 45.0%
!! AAAGGTGTCAGCAATTGGCT+TGG - chr4.4:56583645-56583664 None:intergenic 45.0%
!! TCAGCAATTGGCTTGGAACT+TGG - chr4.4:56583638-56583657 None:intergenic 45.0%
!!! TCTGAGGTTTTGGAACTAGC+TGG - chr4.4:56583267-56583286 None:intergenic 45.0%
AGCAAGTGGTGATAAAGGGC+CGG - chr4.4:56583295-56583314 None:intergenic 50.0%
ATTGCTGACACCTTTGCCGA+TGG + chr4.4:56583650-56583669 MS.gene046080:CDS 50.0%
!! TCGGCAAAGGTGTCAGCAAT+TGG - chr4.4:56583650-56583669 None:intergenic 50.0%
!!! GAGGTTTTGGAACTAGCTGG+AGG - chr4.4:56583264-56583283 None:intergenic 50.0%
CGCCAACTTCCCAAGTTTGC+AGG + chr4.4:56582809-56582828 MS.gene046080:CDS 55.0%
TAAAGGGCCGGTGATGTCTG+AGG - chr4.4:56583283-56583302 None:intergenic 55.0%
!! GCCGGTGATGTCTGAGGTTT+TGG - chr4.4:56583277-56583296 None:intergenic 55.0%
TCCAGGTAACTCGGCCGCAA+TGG - chr4.4:56583097-56583116 None:intergenic 60.0%
TCCATTGCGGCCGAGTTACC+TGG + chr4.4:56583093-56583112 MS.gene046080:CDS 60.0%


Chromosome Type Strat End Strand Name
chr4.4 gene 56582731 56583719 56582731 ID=MS.gene046080
chr4.4 mRNA 56582731 56583719 56582731 ID=MS.gene046080.t1;Parent=MS.gene046080
chr4.4 exon 56582731 56582830 56582731 ID=MS.gene046080.t1.exon1;Parent=MS.gene046080.t1
chr4.4 CDS 56582731 56582830 56582731 ID=cds.MS.gene046080.t1;Parent=MS.gene046080.t1
chr4.4 exon 56582956 56583719 56582956 ID=MS.gene046080.t1.exon2;Parent=MS.gene046080.t1
chr4.4 CDS 56582956 56583719 56582956 ID=cds.MS.gene046080.t1;Parent=MS.gene046080.t1
Gene Sequence

>MS.gene046080

ATGAGGAAAGGAACATGGACTGCTGAAGAAGATAGGAAATTAATTGCTTATGTCACTAGATATGGTTGCTGGAATTGGCGCCAACTTCCCAAGTTTGCAGGTAATTAATATATAGAACTTGGACCTGAAGTTTGGATATTGAACTTTGATGATGATGCTTAAAAAAAATTGTGGTCAAATAACATAAAATTTAATTACTCACTATTGCATCGTTTTTTATTTCAGGTCTTTCAAGGTGTGGGAAGAGTTGTAGATTGAGATGGATGAATTATCTAAGACCTAATATCAAAAGAGGAAACTTCACTCAACAAGAAGAGGAGTTGATTTTCCGAATGCATAAAAAGCTTGGGAATAGATGGTCATCCATTGCGGCCGAGTTACCTGGAAGAACAGATAATGAAGTGAAGAACTATTGGCATACTTCCCTAAAGAAGAGAGTTGATCACAACGAAATCACAAATATTGAAGAAACCAAATCAAAAGACATTGAATCCACAAAAGATAGGGATATTTCCTTTCATCAAGTTACTCCTCCAGCTAGTTCCAAAACCTCAGACATCACCGGCCCTTTATCACCACTTGCTTCATCAAGTGAATTCTCTTCCACAGATTATTCAGATCACAGTACCACTTATGTGGATGATTTTGGTTTTCTAGATGAAATTATAGAATCCGTGGGTGAAAGATTTTGGAATGACCTTTCCAATATACCAAGTGGAATAGTGCAGAACAATACTAATTGTAATTTTAAAAATCAAGATACTAATGTTGGTTTTTTAGTGTCTCCAAATCATTCATGCGATGAAAGTTTTGTTTTGGATAATGATTTTGGAAGCTTTGTAGATACATACAACGAGTCAACAATTGATAGTTTTTGGACACAATCATATGAAGCTGCAATGCACCAAGTTCCAAGCCAATTGCTGACACCTTTGCCGATGGAATCTGAATATTTTTCTATAGTATATGATGAGGATATTTGGAGTTGA
Protein sequence

>MS.gene046080.t1

MRKGTWTAEEDRKLIAYVTRYGCWNWRQLPKFAGLSRCGKSCRLRWMNYLRPNIKRGNFTQQEEELIFRMHKKLGNRWSSIAAELPGRTDNEVKNYWHTSLKKRVDHNEITNIEETKSKDIESTKDRDISFHQVTPPASSKTSDITGPLSPLASSSEFSSTDYSDHSTTYVDDFGFLDEIIESVGERFWNDLSNIPSGIVQNNTNCNFKNQDTNVGFLVSPNHSCDESFVLDNDFGSFVDTYNESTIDSFWTQSYEAAMHQVPSQLLTPLPMESEYFSIVYDEDIWS