Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene046142.t1 | XP_003592799.2 | 93.5 | 402 | 25 | 1 | 1 | 401 | 1 | 402 | 5.10E-201 | 710.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene046142.t1 | Q9MAT6 | 59.7 | 380 | 115 | 10 | 1 | 362 | 1 | 360 | 4.6e-102 | 372.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene046142.t1 | G7IF34 | 93.5 | 402 | 25 | 1 | 1 | 401 | 1 | 402 | 3.7e-201 | 710.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene046142.t1 | TR | ARID |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene046142.t1 | MTR_1g116180 | 96.766 | 402 | 12 | 1 | 1 | 401 | 1 | 402 | 0.0 | 805 |
| MS.gene046142.t1 | MTR_1g116180 | 97.749 | 311 | 6 | 1 | 1 | 310 | 1 | 311 | 0.0 | 630 |
| MS.gene046142.t1 | MTR_7g005970 | 61.598 | 388 | 131 | 6 | 1 | 381 | 1 | 377 | 1.32e-157 | 451 |
| MS.gene046142.t1 | MTR_3g114920 | 45.283 | 318 | 155 | 5 | 24 | 338 | 20 | 321 | 1.35e-84 | 261 |
| MS.gene046142.t1 | MTR_3g009890 | 44.690 | 226 | 104 | 5 | 24 | 247 | 29 | 235 | 2.91e-51 | 173 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene046142.t1 | AT1G04880 | 60.000 | 380 | 114 | 11 | 1 | 362 | 1 | 360 | 4.78e-134 | 392 |
| MS.gene046142.t1 | AT1G76110 | 44.940 | 336 | 161 | 8 | 2 | 334 | 12 | 326 | 8.33e-86 | 265 |
| MS.gene046142.t1 | AT3G13350 | 45.545 | 303 | 133 | 4 | 29 | 330 | 34 | 305 | 6.02e-82 | 254 |
| MS.gene046142.t1 | AT1G55650 | 36.250 | 320 | 155 | 7 | 12 | 330 | 11 | 282 | 2.08e-59 | 196 |
Find 95 sgRNAs with CRISPR-Local
Find 270 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATCCACTTCTGTTTGGTTT+TGG | 0.220656 | 1.3:+79214163 | None:intergenic |
| ATTGCAGGATTCCTGTTATT+GGG | 0.246287 | 1.3:-79217000 | MS.gene046142:intron |
| TATTGCAGGATTCCTGTTAT+TGG | 0.282044 | 1.3:-79217001 | MS.gene046142:intron |
| TGTGGATTCATTGCCTGTTA+TGG | 0.326537 | 1.3:-79213466 | MS.gene046142:CDS |
| GAAGCATTTGTAGCCGTTGA+TGG | 0.327945 | 1.3:+79216497 | None:intergenic |
| AATAATAGATTTGTTCATAA+TGG | 0.330253 | 1.3:+79216438 | None:intergenic |
| GTACCTCTCTTTGTCCTTCA+CGG | 0.336959 | 1.3:+79213689 | None:intergenic |
| GTATGTGAAAACTGCATCTT+TGG | 0.346993 | 1.3:+79216261 | None:intergenic |
| GTGGATTCATTGCCTGTTAT+GGG | 0.359014 | 1.3:-79213465 | MS.gene046142:CDS |
| CGGCAGGATCTCAGGTTGTC+GGG | 0.362545 | 1.3:-79214399 | MS.gene046142:CDS |
| AGATCATTAAAGATAGAAAA+TGG | 0.378478 | 1.3:-79216547 | MS.gene046142:CDS |
| GCTCAAAGCTGTCTCTTTCA+TGG | 0.381404 | 1.3:+79217312 | None:intergenic |
| GCATTCAACATGTCAGTATC+TGG | 0.384305 | 1.3:+79213579 | None:intergenic |
| TGCATCTTTGGAGCAGGAGC+TGG | 0.387029 | 1.3:+79216273 | None:intergenic |
| CAGGTTGTCGGGGTCATTGA+TGG | 0.395002 | 1.3:-79214388 | MS.gene046142:CDS |
| TATCTAGTTACTGTCACAAT+TGG | 0.419081 | 1.3:-79214349 | MS.gene046142:CDS |
| TCAGCACCAACTCCCATAAC+AGG | 0.424034 | 1.3:+79213453 | None:intergenic |
| AAATTGTATCCACTTCTGTT+TGG | 0.426908 | 1.3:+79214157 | None:intergenic |
| CTCAGCAATGGGATCATCTT+CGG | 0.429472 | 1.3:-79214419 | MS.gene046142:intron |
| TCATTGCCTGTTATGGGAGT+TGG | 0.435413 | 1.3:-79213459 | MS.gene046142:CDS |
| ATCATCTTCGGCAGGATCTC+AGG | 0.435568 | 1.3:-79214407 | MS.gene046142:CDS |
| ATTGATGGGAAATTTGATAG+TGG | 0.443834 | 1.3:-79214373 | MS.gene046142:CDS |
| AGAGAGGTACATAACAGAAA+TGG | 0.452384 | 1.3:-79213676 | MS.gene046142:CDS |
| TCGGCAGGATCTCAGGTTGT+CGG | 0.453538 | 1.3:-79214400 | MS.gene046142:CDS |
| TGTTGTTAGCAGGAACACTA+TGG | 0.456419 | 1.3:+79214263 | None:intergenic |
| GCTGTCTCTTTCATGGGTAA+TGG | 0.461532 | 1.3:+79217319 | None:intergenic |
| CAAGCTCTTCATACTTAGCT+TGG | 0.463066 | 1.3:-79217236 | MS.gene046142:CDS |
| GAACATACCGGAAGTTGTAT+TGG | 0.464656 | 1.3:+79216397 | None:intergenic |
| TGGTGGGATGCTGGCAGCAC+AGG | 0.472613 | 1.3:+79214283 | None:intergenic |
| AACTGGACCAATACAACTTC+CGG | 0.475197 | 1.3:-79216404 | MS.gene046142:intron |
| AGTTACTGTCACAATTGGTT+CGG | 0.475294 | 1.3:-79214344 | MS.gene046142:CDS |
| GGAAGGACCGAGAGATTAGT+AGG | 0.477594 | 1.3:-79214090 | MS.gene046142:CDS |
| TTCACCTATGGCAACATATG+AGG | 0.483062 | 1.3:-79217275 | MS.gene046142:CDS |
| AACATGTCAGTATCTGGTTC+AGG | 0.486501 | 1.3:+79213585 | None:intergenic |
| GCGGTCACGTTGTTGTTAGC+AGG | 0.489436 | 1.3:+79214253 | None:intergenic |
| CAAGCTAAGTATGAAGAGCT+TGG | 0.497014 | 1.3:+79217237 | None:intergenic |
| CTTTGGAGCAGGAGCTGGGA+TGG | 0.499860 | 1.3:+79216278 | None:intergenic |
| GGAACACTATGGTGGGATGC+TGG | 0.501068 | 1.3:+79214274 | None:intergenic |
| TTTAACTGTTGAAAGACAGC+TGG | 0.504737 | 1.3:+79216222 | None:intergenic |
| CCAGGGAGCCTACATGAACT+TGG | 0.508162 | 1.3:+79217189 | None:intergenic |
| TGATGACTATGAAGATGATA+AGG | 0.508495 | 1.3:-79213508 | MS.gene046142:CDS |
| GTGTCCATCGTCGCCGACGC+AGG | 0.509894 | 1.3:-79214222 | MS.gene046142:CDS |
| TTTGTTGAAGTGACTTCTCG+TGG | 0.510774 | 1.3:-79216950 | MS.gene046142:CDS |
| GGAGAAGCTCCACACTCTCA+TGG | 0.512213 | 1.3:-79217215 | MS.gene046142:CDS |
| AAGCTAAGTATGAAGAGCTT+GGG | 0.516105 | 1.3:+79217238 | None:intergenic |
| CGGTCCTTCCCTCGGTGAAG+AGG | 0.519858 | 1.3:+79214103 | None:intergenic |
| GCATCTTTGGAGCAGGAGCT+GGG | 0.522935 | 1.3:+79216274 | None:intergenic |
| CGAGAGATTAGTAGGACCAT+TGG | 0.525975 | 1.3:-79214082 | MS.gene046142:CDS |
| TGGTGAATATCCTTCACCTA+TGG | 0.528306 | 1.3:-79217287 | MS.gene046142:CDS |
| TTGCAGGATTCCTGTTATTG+GGG | 0.528895 | 1.3:-79216999 | MS.gene046142:intron |
| TAATCTCTCGGTCCTTCCCT+CGG | 0.534837 | 1.3:+79214095 | None:intergenic |
| GAAAACTGCATCTTTGGAGC+AGG | 0.538241 | 1.3:+79216267 | None:intergenic |
| CTCAAAGCTGTCTCTTTCAT+GGG | 0.539064 | 1.3:+79217313 | None:intergenic |
| TCTTCCTGCGTCGGCGACGA+TGG | 0.540297 | 1.3:+79214218 | None:intergenic |
| TTGAAGTGACTTCTCGTGGA+GGG | 0.541093 | 1.3:-79216946 | MS.gene046142:CDS |
| CCGTCTGAACTACTCTGCTC+CGG | 0.545473 | 1.3:+79213534 | None:intergenic |
| GATCATTCTTCAACTTCTCA+CGG | 0.547465 | 1.3:+79213646 | None:intergenic |
| CAATGGTCCTACTAATCTCT+CGG | 0.547885 | 1.3:+79214083 | None:intergenic |
| GTTAATTCTGCTCCGCCTGA+AGG | 0.550930 | 1.3:-79216198 | MS.gene046142:intron |
| GTAGGACCATTGGTGAACTC+TGG | 0.551646 | 1.3:-79214072 | MS.gene046142:CDS |
| CACCCAAAACCAAACAGAAG+TGG | 0.557660 | 1.3:-79214166 | MS.gene046142:CDS |
| AGGTTGTCGGGGTCATTGAT+GGG | 0.564891 | 1.3:-79214387 | MS.gene046142:CDS |
| TCATATGTTGCCATAGGTGA+AGG | 0.568033 | 1.3:+79217277 | None:intergenic |
| TCTCTGATTTCTTCCTGCGT+CGG | 0.568830 | 1.3:+79214209 | None:intergenic |
| GGCAGACTCTCTTCAAACTC+CGG | 0.569431 | 1.3:-79213553 | MS.gene046142:CDS |
| GAGAAGCTCCACACTCTCAT+GGG | 0.571795 | 1.3:-79217214 | MS.gene046142:CDS |
| TCTTTGCAGAACAGCATCCA+AGG | 0.571889 | 1.3:-79214132 | MS.gene046142:CDS |
| GCAATGGGATCATCTTCGGC+AGG | 0.580770 | 1.3:-79214415 | MS.gene046142:CDS |
| TCAGGAAATCGCTGTTGAAG+TGG | 0.581487 | 1.3:+79213603 | None:intergenic |
| AAAGAGACAGCTTTGAGCCA+TGG | 0.588397 | 1.3:-79217307 | MS.gene046142:CDS |
| GGCTAAAACCTCTTCACCGA+GGG | 0.597780 | 1.3:-79214111 | MS.gene046142:CDS |
| TGTTAGCAGGAACACTATGG+TGG | 0.605828 | 1.3:+79214266 | None:intergenic |
| AAGACAGCTGGTTGAACTTG+TGG | 0.608568 | 1.3:+79216234 | None:intergenic |
| CCGGAGCAGAGTAGTTCAGA+CGG | 0.612929 | 1.3:-79213534 | MS.gene046142:CDS |
| CTATGAAGATGATAAGGCGA+AGG | 0.615408 | 1.3:-79213502 | MS.gene046142:CDS |
| TTATCAAGATAAAGCCGTGA+AGG | 0.616173 | 1.3:-79213703 | MS.gene046142:CDS |
| CTTGTTCCAGAGTTCACCAA+TGG | 0.619707 | 1.3:+79214066 | None:intergenic |
| ACCTCCTCATATGTTGCCAT+AGG | 0.625420 | 1.3:+79217271 | None:intergenic |
| AAAACCTCTTCACCGAGGGA+AGG | 0.626858 | 1.3:-79214107 | MS.gene046142:CDS |
| ACCTATGGCAACATATGAGG+AGG | 0.630539 | 1.3:-79217272 | MS.gene046142:CDS |
| AACAACGTGACCGCCTCTGT+CGG | 0.631474 | 1.3:-79214244 | MS.gene046142:CDS |
| GTTGAAGTGACTTCTCGTGG+AGG | 0.634997 | 1.3:-79216947 | MS.gene046142:CDS |
| GGCAGGATCTCAGGTTGTCG+GGG | 0.638448 | 1.3:-79214398 | MS.gene046142:CDS |
| TGCAGGATTCCTGTTATTGG+GGG | 0.639336 | 1.3:-79216998 | MS.gene046142:intron |
| AAGCCGTGAAGGACAAAGAG+AGG | 0.641251 | 1.3:-79213692 | MS.gene046142:CDS |
| ATTGGTTCGGAGATACTCAA+AGG | 0.651961 | 1.3:-79214331 | MS.gene046142:CDS |
| GCGACGATGGACACCGACAG+AGG | 0.659779 | 1.3:+79214231 | None:intergenic |
| TACTGACATGTTGAATGCTG+AGG | 0.661079 | 1.3:-79213574 | MS.gene046142:CDS |
| GAGAAGTCACTTCAACAAAG+AGG | 0.662036 | 1.3:+79216954 | None:intergenic |
| ACTTGGTGCCCATGAGAGTG+TGG | 0.664789 | 1.3:+79217206 | None:intergenic |
| ACGATGGACACCGACAGAGG+CGG | 0.677611 | 1.3:+79214234 | None:intergenic |
| GCAAAGCAAAGACCTTCAGG+CGG | 0.704080 | 1.3:+79216186 | None:intergenic |
| TAGGTGAAGGATATTCACCA+TGG | 0.732815 | 1.3:+79217290 | None:intergenic |
| AGGCTAAAACCTCTTCACCG+AGG | 0.737163 | 1.3:-79214112 | MS.gene046142:CDS |
| GTTAGCAGGAACACTATGGT+GGG | 0.739497 | 1.3:+79214267 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAACATACAAAAGATT+AGG | + | chr1.3:79216267-79216286 | None:intergenic | 15.0% |
| !! | ATAAACAATACTAGTTATTA+TGG | + | chr1.3:79216345-79216364 | None:intergenic | 15.0% |
| !!! | AATAATAGATTTGTTCATAA+TGG | + | chr1.3:79214360-79214379 | None:intergenic | 15.0% |
| !!! | GATTATAATTTCAATTTTGT+TGG | - | chr1.3:79213890-79213909 | MS.gene046142:intron | 15.0% |
| !!! | TTAGTAGTTAATCTTATTTT+GGG | + | chr1.3:79214644-79214663 | None:intergenic | 15.0% |
| !!! | TTTACTTTTATTTTAAGATG+TGG | - | chr1.3:79213663-79213682 | MS.gene046142:CDS | 15.0% |
| !!! | TTTGTTTTTGAGAATATTTT+AGG | - | chr1.3:79214691-79214710 | MS.gene046142:intron | 15.0% |
| !! | AGATCATTAAAGATAGAAAA+TGG | - | chr1.3:79214248-79214267 | MS.gene046142:CDS | 20.0% |
| !! | ATAAATTGGAAATTTCACTA+TGG | - | chr1.3:79214470-79214489 | MS.gene046142:intron | 20.0% |
| !! | ATTATGAGCTTACATTTAAT+GGG | - | chr1.3:79215490-79215509 | MS.gene046142:intron | 20.0% |
| !! | CAATCCTATATTAAGTTTAA+AGG | + | chr1.3:79216125-79216144 | None:intergenic | 20.0% |
| !! | TATGTTTAAATTGATGGAAA+GGG | - | chr1.3:79214715-79214734 | MS.gene046142:intron | 20.0% |
| !! | TATTATGAGCTTACATTTAA+TGG | - | chr1.3:79215489-79215508 | MS.gene046142:intron | 20.0% |
| !! | TCAATTCTCAAATAATGAAA+TGG | - | chr1.3:79215098-79215117 | MS.gene046142:intron | 20.0% |
| !! | TCATTATTTGAGAATTGAAA+TGG | + | chr1.3:79215096-79215115 | None:intergenic | 20.0% |
| !! | TTAGGTTATGTTTAAATTGA+TGG | - | chr1.3:79214709-79214728 | MS.gene046142:intron | 20.0% |
| !! | TTATGTTTAAATTGATGGAA+AGG | - | chr1.3:79214714-79214733 | MS.gene046142:intron | 20.0% |
| !! | TTCCAATTTATACATTAGAA+GGG | + | chr1.3:79214461-79214480 | None:intergenic | 20.0% |
| !! | TTGCAATTACAAAAAACATT+TGG | - | chr1.3:79213766-79213785 | MS.gene046142:intron | 20.0% |
| !! | TTTCCAATTTATACATTAGA+AGG | + | chr1.3:79214462-79214481 | None:intergenic | 20.0% |
| !!! | ATTCTTTTGAATCATAACTT+TGG | - | chr1.3:79214166-79214185 | MS.gene046142:CDS | 20.0% |
| !!! | GTTAGTAGTTAATCTTATTT+TGG | + | chr1.3:79214645-79214664 | None:intergenic | 20.0% |
| !!! | TAGTTTTCAATCTAGATATA+TGG | - | chr1.3:79215222-79215241 | MS.gene046142:intron | 20.0% |
| ! | AAACAATCAAACAATGGAAT+AGG | - | chr1.3:79215139-79215158 | MS.gene046142:intron | 25.0% |
| ! | AAATAGAAAGAATGGTTAAC+AGG | + | chr1.3:79216233-79216252 | None:intergenic | 25.0% |
| ! | AACAATCAAACAATGGAATA+GGG | - | chr1.3:79215140-79215159 | MS.gene046142:intron | 25.0% |
| ! | AATAGAAAGAATGGTTAACA+GGG | + | chr1.3:79216232-79216251 | None:intergenic | 25.0% |
| ! | AATTCGTAGTTTATAAATCC+AGG | + | chr1.3:79213627-79213646 | None:intergenic | 25.0% |
| ! | ACATTTATCACTAAATCTCT+CGG | + | chr1.3:79216098-79216117 | None:intergenic | 25.0% |
| ! | ATAACAGTAAGAGAAGTTAT+AGG | + | chr1.3:79216317-79216336 | None:intergenic | 25.0% |
| ! | ATGTTTAAATTGATGGAAAG+GGG | - | chr1.3:79214716-79214735 | MS.gene046142:intron | 25.0% |
| ! | ATTCGTAGTTTATAAATCCA+GGG | + | chr1.3:79213626-79213645 | None:intergenic | 25.0% |
| ! | ATTGTTTGATTGTTTCATTG+AGG | + | chr1.3:79215134-79215153 | None:intergenic | 25.0% |
| ! | CTATTTAACGATTAGAGAAA+TGG | + | chr1.3:79215205-79215224 | None:intergenic | 25.0% |
| ! | TAAGTAATCTCTAATCTATC+TGG | - | chr1.3:79216892-79216911 | MS.gene046142:intron | 25.0% |
| ! | TAATATAGTATCTTTCTCCT+AGG | - | chr1.3:79215262-79215281 | MS.gene046142:intron | 25.0% |
| ! | TATTTGAGAATTGAAATGGT+AGG | + | chr1.3:79215092-79215111 | None:intergenic | 25.0% |
| ! | TCAAATTTCACTACTCTATA+GGG | + | chr1.3:79214946-79214965 | None:intergenic | 25.0% |
| ! | TCAATGAAACAATCAAACAA+TGG | - | chr1.3:79215133-79215152 | MS.gene046142:intron | 25.0% |
| ! | TCCAATTTATACATTAGAAG+GGG | + | chr1.3:79214460-79214479 | None:intergenic | 25.0% |
| ! | TCCACCTTTAAACTTAATAT+AGG | - | chr1.3:79216118-79216137 | MS.gene046142:intron | 25.0% |
| ! | TCCTATATTAAGTTTAAAGG+TGG | + | chr1.3:79216122-79216141 | None:intergenic | 25.0% |
| ! | TCTTGATAAACCTTAAATGT+TGG | + | chr1.3:79217081-79217100 | None:intergenic | 25.0% |
| ! | TGCAAAGTTATACAAGTAAA+TGG | + | chr1.3:79213751-79213770 | None:intergenic | 25.0% |
| ! | TTCAAATTTCACTACTCTAT+AGG | + | chr1.3:79214947-79214966 | None:intergenic | 25.0% |
| !! | AAAGTACTAGAGTGAAAATT+GGG | - | chr1.3:79215944-79215963 | MS.gene046142:intron | 25.0% |
| !! | ACTGATAATGTCCAAAATAT+AGG | - | chr1.3:79213960-79213979 | MS.gene046142:intron | 25.0% |
| !! | AGGTAAGTCAATTTTATCAA+TGG | + | chr1.3:79215072-79215091 | None:intergenic | 25.0% |
| !! | AGTTTTCAATTTTCCATCAA+CGG | - | chr1.3:79214285-79214304 | MS.gene046142:CDS | 25.0% |
| !! | ATGATTTTCCATGACTTAAT+CGG | - | chr1.3:79215286-79215305 | MS.gene046142:intron | 25.0% |
| !! | GTTAACCATTCTTTCTATTT+TGG | - | chr1.3:79216233-79216252 | MS.gene046142:CDS | 25.0% |
| !! | TAAGTCAATTTTATCAATGG+AGG | + | chr1.3:79215069-79215088 | None:intergenic | 25.0% |
| !! | TGATGGTCTTTTAAATCTAT+TGG | - | chr1.3:79215323-79215342 | MS.gene046142:intron | 25.0% |
| !! | TGCTATTTAGTACAAAATAG+CGG | - | chr1.3:79214990-79215009 | MS.gene046142:intron | 25.0% |
| !! | TGTAAGATTTGTGCTATTAT+AGG | + | chr1.3:79215853-79215872 | None:intergenic | 25.0% |
| !! | TTAACACATCTTTTATGAGT+TGG | - | chr1.3:79216786-79216805 | MS.gene046142:intron | 25.0% |
| !! | TTCAATTTCCTTTTTCTTAG+TGG | + | chr1.3:79214667-79214686 | None:intergenic | 25.0% |
| !!! | AAAAGTACTAGAGTGAAAAT+TGG | - | chr1.3:79215943-79215962 | MS.gene046142:intron | 25.0% |
| !!! | AACATTTGGAATTTTATTGC+AGG | - | chr1.3:79213780-79213799 | MS.gene046142:intron | 25.0% |
| !!! | AAGGAAGTTTTGTTTTCATT+TGG | + | chr1.3:79215741-79215760 | None:intergenic | 25.0% |
| !!! | ACATTTTAAGTTTAGTATCG+TGG | - | chr1.3:79215870-79215889 | MS.gene046142:intron | 25.0% |
| !!! | ATTCTTTCTATTTTGGAAGT+GGG | - | chr1.3:79216240-79216259 | MS.gene046142:CDS | 25.0% |
| !!! | CTCTAATTTTTAAAGCTTCT+GGG | + | chr1.3:79216934-79216953 | None:intergenic | 25.0% |
| !!! | GTCCTTTTGATGATAAAATA+AGG | + | chr1.3:79215444-79215463 | None:intergenic | 25.0% |
| !!! | TAGGTAAATGTTAGTTTTCA+AGG | - | chr1.3:79215602-79215621 | MS.gene046142:intron | 25.0% |
| !!! | TCTAATTTTTAAAGCTTCTG+GGG | + | chr1.3:79216933-79216952 | None:intergenic | 25.0% |
| !!! | TCTCTAATTTTTAAAGCTTC+TGG | + | chr1.3:79216935-79216954 | None:intergenic | 25.0% |
| !!! | TGCCTTATTTTATCATCAAA+AGG | - | chr1.3:79215439-79215458 | MS.gene046142:intron | 25.0% |
| AAAGGATATTCCAATAGTCA+GGG | - | chr1.3:79216048-79216067 | MS.gene046142:intron | 30.0% | |
| AAATTAGAGAATGATAGCTC+AGG | - | chr1.3:79216945-79216964 | MS.gene046142:CDS | 30.0% | |
| AAATTGTATCCACTTCTGTT+TGG | + | chr1.3:79216641-79216660 | None:intergenic | 30.0% | |
| AAGCTCAGATATGCATTATT+TGG | - | chr1.3:79217014-79217033 | MS.gene046142:intron | 30.0% | |
| AAGTACTAGAGTGAAAATTG+GGG | - | chr1.3:79215945-79215964 | MS.gene046142:intron | 30.0% | |
| AATTAGAGAATGATAGCTCA+GGG | - | chr1.3:79216946-79216965 | MS.gene046142:CDS | 30.0% | |
| ACGAATTAGATATTGTGACT+TGG | - | chr1.3:79213640-79213659 | MS.gene046142:CDS | 30.0% | |
| ACTACTAACCACTAAGAAAA+AGG | - | chr1.3:79214656-79214675 | MS.gene046142:intron | 30.0% | |
| ATTGATGGGAAATTTGATAG+TGG | - | chr1.3:79216422-79216441 | MS.gene046142:CDS | 30.0% | |
| CAATAGTTCTTAGACCAAAT+AGG | + | chr1.3:79216864-79216883 | None:intergenic | 30.0% | |
| CACTTCCAAAATAGAAAGAA+TGG | + | chr1.3:79216241-79216260 | None:intergenic | 30.0% | |
| CATTAAGATGAATGAGTTGT+CGG | - | chr1.3:79215901-79215920 | MS.gene046142:intron | 30.0% | |
| CTACATATTCACACAATGTT+TGG | + | chr1.3:79213938-79213957 | None:intergenic | 30.0% | |
| GGTTAAAAACTATAGAGATG+TGG | + | chr1.3:79214813-79214832 | None:intergenic | 30.0% | |
| GTATAGGGTTTGATATATGT+TGG | - | chr1.3:79216190-79216209 | MS.gene046142:intron | 30.0% | |
| TAAAGGATATTCCAATAGTC+AGG | - | chr1.3:79216047-79216066 | MS.gene046142:intron | 30.0% | |
| TAATTAACAACAGTAGGGTA+GGG | + | chr1.3:79214902-79214921 | None:intergenic | 30.0% | |
| TATCTAGTTACTGTCACAAT+TGG | - | chr1.3:79216446-79216465 | MS.gene046142:CDS | 30.0% | |
| TGATGACTATGAAGATGATA+AGG | - | chr1.3:79217287-79217306 | MS.gene046142:CDS | 30.0% | |
| TGTATATTCCGATTAAGTCA+TGG | + | chr1.3:79215297-79215316 | None:intergenic | 30.0% | |
| TTAGAGAAATGGAATCAGAA+AGG | + | chr1.3:79215194-79215213 | None:intergenic | 30.0% | |
| TTGTTAATTAGTGGCTACAT+CGG | - | chr1.3:79214912-79214931 | MS.gene046142:intron | 30.0% | |
| ! | ATTTTGTTGGTATGAATGCA+TGG | - | chr1.3:79213903-79213922 | MS.gene046142:intron | 30.0% |
| ! | CGGAATATACATGATTTTGA+TGG | - | chr1.3:79215306-79215325 | MS.gene046142:intron | 30.0% |
| ! | CTCTATAGTTTTTAACCTGT+CGG | - | chr1.3:79214816-79214835 | MS.gene046142:intron | 30.0% |
| ! | TCTATAGTTTTTAACCTGTC+GGG | - | chr1.3:79214817-79214836 | MS.gene046142:intron | 30.0% |
| ! | TTAAGTTGCACCAACATTTA+AGG | - | chr1.3:79217068-79217087 | MS.gene046142:intron | 30.0% |
| ! | TTGTTTGGATTGTCTGAAAT+AGG | - | chr1.3:79214750-79214769 | MS.gene046142:intron | 30.0% |
| !! | CATTCTTTCTATTTTGGAAG+TGG | - | chr1.3:79216239-79216258 | MS.gene046142:CDS | 30.0% |
| !!! | ATTATTTTAAAGCTCGCAAC+TGG | - | chr1.3:79214374-79214393 | MS.gene046142:CDS | 30.0% |
| !!! | CTAATTTTTAAAGCTTCTGG+GGG | + | chr1.3:79216932-79216951 | None:intergenic | 30.0% |
| !!! | TTTGGTTTTTCCTACATGTT+TGG | - | chr1.3:79214184-79214203 | MS.gene046142:CDS | 30.0% |
| AAACTATAGAGATGTGGTGA+TGG | + | chr1.3:79214807-79214826 | None:intergenic | 35.0% | |
| AACGAGAGTTGACTAGATAA+AGG | - | chr1.3:79216030-79216049 | MS.gene046142:intron | 35.0% | |
| AAGCTAAGTATGAAGAGCTT+GGG | + | chr1.3:79213560-79213579 | None:intergenic | 35.0% | |
| AATTAACAACAGTAGGGTAG+GGG | + | chr1.3:79214901-79214920 | None:intergenic | 35.0% | |
| ACCCTACTGTTGTTAATTAG+TGG | - | chr1.3:79214903-79214922 | MS.gene046142:intron | 35.0% | |
| AGCAAGAAACTCACAGATTA+TGG | - | chr1.3:79215805-79215824 | MS.gene046142:intron | 35.0% | |
| AGCCACTAATTAACAACAGT+AGG | + | chr1.3:79214908-79214927 | None:intergenic | 35.0% | |
| AGTCATGGAAAATCATTCCT+AGG | + | chr1.3:79215282-79215301 | None:intergenic | 35.0% | |
| AGTGATACAGTTACCTTATC+TGG | - | chr1.3:79214211-79214230 | MS.gene046142:CDS | 35.0% | |
| AGTTACTGTCACAATTGGTT+CGG | - | chr1.3:79216451-79216470 | MS.gene046142:CDS | 35.0% | |
| ATATCAAACCCTATACCACT+AGG | + | chr1.3:79216186-79216205 | None:intergenic | 35.0% | |
| ATCACTACAACCAAACATGT+AGG | + | chr1.3:79214197-79214216 | None:intergenic | 35.0% | |
| ATGAGCTTACATTTAATGGG+TGG | - | chr1.3:79215493-79215512 | MS.gene046142:intron | 35.0% | |
| ATTGCAGGATTCCTGTTATT+GGG | - | chr1.3:79213795-79213814 | MS.gene046142:intron | 35.0% | |
| CAAGACAGATTAACCAGATA+AGG | + | chr1.3:79214227-79214246 | None:intergenic | 35.0% | |
| CTAATTAACAACAGTAGGGT+AGG | + | chr1.3:79214903-79214922 | None:intergenic | 35.0% | |
| CTGAATCAGAAAAAGCAGTA+AGG | - | chr1.3:79216756-79216775 | MS.gene046142:intron | 35.0% | |
| GATCATTCTTCAACTTCTCA+CGG | + | chr1.3:79217152-79217171 | None:intergenic | 35.0% | |
| GATTGTTTCATTGAGGAACT+AGG | + | chr1.3:79215127-79215146 | None:intergenic | 35.0% | |
| GCCACTAATTAACAACAGTA+GGG | + | chr1.3:79214907-79214926 | None:intergenic | 35.0% | |
| GCCCCTTCTAATGTATAAAT+TGG | - | chr1.3:79214456-79214475 | MS.gene046142:intron | 35.0% | |
| GTATGTGAAAACTGCATCTT+TGG | + | chr1.3:79214537-79214556 | None:intergenic | 35.0% | |
| TAAATCTCTCGGTACTAGTT+TGG | + | chr1.3:79216087-79216106 | None:intergenic | 35.0% | |
| TAGCTCAGGGATTAAATTAC+AGG | - | chr1.3:79216959-79216978 | MS.gene046142:CDS | 35.0% | |
| TATTGAAAAACCATCTCCCT+CGG | + | chr1.3:79215584-79215603 | None:intergenic | 35.0% | |
| TATTGCAGGATTCCTGTTAT+TGG | - | chr1.3:79213794-79213813 | MS.gene046142:intron | 35.0% | |
| TCGTTACTAGTACTTACACA+TGG | + | chr1.3:79216015-79216034 | None:intergenic | 35.0% | |
| TGGAGGATCAAGAAAAATAG+CGG | + | chr1.3:79215052-79215071 | None:intergenic | 35.0% | |
| TGTAGTTCCAATGAACATAC+CGG | + | chr1.3:79214413-79214432 | None:intergenic | 35.0% | |
| TTATCAAGATAAAGCCGTGA+AGG | - | chr1.3:79217092-79217111 | MS.gene046142:intron | 35.0% | |
| TTGTAAGACGTCACAATGTT+TGG | - | chr1.3:79215638-79215657 | MS.gene046142:intron | 35.0% | |
| TTGTCGGACAATATAGTACT+AGG | - | chr1.3:79215917-79215936 | MS.gene046142:intron | 35.0% | |
| TTTAACTGTTGAAAGACAGC+TGG | + | chr1.3:79214576-79214595 | None:intergenic | 35.0% | |
| ! | ACATAATTTGTCATCGTGCA+CGG | + | chr1.3:79215416-79215435 | None:intergenic | 35.0% |
| ! | AGAGAGGTACATAACAGAAA+TGG | - | chr1.3:79217119-79217138 | MS.gene046142:intron | 35.0% |
| ! | ATTGTCTGAAATAGGATGTG+AGG | - | chr1.3:79214758-79214777 | MS.gene046142:intron | 35.0% |
| ! | TGAGCTTACATTTAATGGGT+GGG | - | chr1.3:79215494-79215513 | MS.gene046142:intron | 35.0% |
| ! | TGCTGTTTGTACTAATGTCA+GGG | - | chr1.3:79214434-79214453 | MS.gene046142:intron | 35.0% |
| ! | TTGTGCTATTATAGGATCAC+AGG | + | chr1.3:79215845-79215864 | None:intergenic | 35.0% |
| ! | TTTTAACCTGTCGGGATATT+GGG | - | chr1.3:79214825-79214844 | MS.gene046142:intron | 35.0% |
| ! | TTTTTAACCTGTCGGGATAT+TGG | - | chr1.3:79214824-79214843 | MS.gene046142:intron | 35.0% |
| !! | GAAGGAGAAAGATTTTAGTG+TGG | - | chr1.3:79217311-79217330 | MS.gene046142:CDS | 35.0% |
| !! | TATCCACTTCTGTTTGGTTT+TGG | + | chr1.3:79216635-79216654 | None:intergenic | 35.0% |
| !! | TTAGTTTTCAAGGTTTGCTC+AGG | - | chr1.3:79215612-79215631 | MS.gene046142:intron | 35.0% |
| !! | TTGCTGTTTGTACTAATGTC+AGG | - | chr1.3:79214433-79214452 | MS.gene046142:intron | 35.0% |
| !!! | ATCCACTTCTGTTTGGTTTT+GGG | + | chr1.3:79216634-79216653 | None:intergenic | 35.0% |
| !!! | CTTACTGCTTTTTCTGATTC+AGG | + | chr1.3:79216758-79216777 | None:intergenic | 35.0% |
| AAAGCAAAGCAAAGACCTTC+AGG | + | chr1.3:79214615-79214634 | None:intergenic | 40.0% | |
| AACTGGACCAATACAACTTC+CGG | - | chr1.3:79214391-79214410 | MS.gene046142:CDS | 40.0% | |
| AACTTCCTTCTAAGCAGCTT+AGG | - | chr1.3:79215752-79215771 | MS.gene046142:intron | 40.0% | |
| AATGCATATCTGAGCTTCTG+CGG | + | chr1.3:79217011-79217030 | None:intergenic | 40.0% | |
| ACAACTTCCGGTATGTTCAT+TGG | - | chr1.3:79214403-79214422 | MS.gene046142:CDS | 40.0% | |
| AGGTAAGAGCAGGATAGTTT+AGG | + | chr1.3:79216844-79216863 | None:intergenic | 40.0% | |
| ATTAACAACAGTAGGGTAGG+GGG | + | chr1.3:79214900-79214919 | None:intergenic | 40.0% | |
| ATTCACACAATGTTTGGCGT+CGG | + | chr1.3:79213932-79213951 | None:intergenic | 40.0% | |
| CAAGCTAAGTATGAAGAGCT+TGG | + | chr1.3:79213561-79213580 | None:intergenic | 40.0% | |
| CAAGCTCTTCATACTTAGCT+TGG | - | chr1.3:79213559-79213578 | MS.gene046142:CDS | 40.0% | |
| CAATCCATTGCAAAATCCGA+GGG | - | chr1.3:79215565-79215584 | MS.gene046142:intron | 40.0% | |
| CAATGGTCCTACTAATCTCT+CGG | + | chr1.3:79216715-79216734 | None:intergenic | 40.0% | |
| CTATCCTGCTCTTACCTATT+TGG | - | chr1.3:79216847-79216866 | MS.gene046142:intron | 40.0% | |
| CTATGAAGATGATAAGGCGA+AGG | - | chr1.3:79217293-79217312 | MS.gene046142:CDS | 40.0% | |
| CTCAAAGCTGTCTCTTTCAT+GGG | + | chr1.3:79213485-79213504 | None:intergenic | 40.0% | |
| GAACATACCGGAAGTTGTAT+TGG | + | chr1.3:79214401-79214420 | None:intergenic | 40.0% | |
| GAGAAGTCACTTCAACAAAG+AGG | + | chr1.3:79213844-79213863 | None:intergenic | 40.0% | |
| GCATTCAACATGTCAGTATC+TGG | + | chr1.3:79217219-79217238 | None:intergenic | 40.0% | |
| GGAGGATCAAGAAAAATAGC+GGG | + | chr1.3:79215051-79215070 | None:intergenic | 40.0% | |
| GTCCAAAATATAGGACACTG+AGG | - | chr1.3:79213969-79213988 | MS.gene046142:intron | 40.0% | |
| GTGGATTCATTGCCTGTTAT+GGG | - | chr1.3:79217330-79217349 | MS.gene046142:CDS | 40.0% | |
| TACTGACATGTTGAATGCTG+AGG | - | chr1.3:79217221-79217240 | MS.gene046142:CDS | 40.0% | |
| TAGACCAAATAGGTAAGAGC+AGG | + | chr1.3:79216854-79216873 | None:intergenic | 40.0% | |
| TAGGTGAAGGATATTCACCA+TGG | + | chr1.3:79213508-79213527 | None:intergenic | 40.0% | |
| TCATATGTTGCCATAGGTGA+AGG | + | chr1.3:79213521-79213540 | None:intergenic | 40.0% | |
| TGGTGAATATCCTTCACCTA+TGG | - | chr1.3:79213508-79213527 | MS.gene046142:CDS | 40.0% | |
| TGTGGATTCATTGCCTGTTA+TGG | - | chr1.3:79217329-79217348 | MS.gene046142:CDS | 40.0% | |
| TGTTGTTAGCAGGAACACTA+TGG | + | chr1.3:79216535-79216554 | None:intergenic | 40.0% | |
| TTACACCTAAGCTGCTTAGA+AGG | + | chr1.3:79215760-79215779 | None:intergenic | 40.0% | |
| TTCACCTATGGCAACATATG+AGG | - | chr1.3:79213520-79213539 | MS.gene046142:CDS | 40.0% | |
| TTGCAGGATTCCTGTTATTG+GGG | - | chr1.3:79213796-79213815 | MS.gene046142:intron | 40.0% | |
| TTTAACCTGTCGGGATATTG+GGG | - | chr1.3:79214826-79214845 | MS.gene046142:intron | 40.0% | |
| TTTGTTGAAGTGACTTCTCG+TGG | - | chr1.3:79213845-79213864 | MS.gene046142:intron | 40.0% | |
| ! | AACATGTCAGTATCTGGTTC+AGG | + | chr1.3:79217213-79217232 | None:intergenic | 40.0% |
| ! | ACTTTTGTCACCCTGACTAT+TGG | + | chr1.3:79216061-79216080 | None:intergenic | 40.0% |
| ! | CAAATGCTTCTTTTGTGCTG+CGG | - | chr1.3:79214311-79214330 | MS.gene046142:CDS | 40.0% |
| ! | GAGCTTACATTTAATGGGTG+GGG | - | chr1.3:79215495-79215514 | MS.gene046142:intron | 40.0% |
| !! | ATTGGTTCGGAGATACTCAA+AGG | - | chr1.3:79216464-79216483 | MS.gene046142:CDS | 40.0% |
| !! | GAGGGAGATGGTTTTTCAAT+AGG | - | chr1.3:79215583-79215602 | MS.gene046142:intron | 40.0% |
| AAGACAGCTGGTTGAACTTG+TGG | + | chr1.3:79214564-79214583 | None:intergenic | 45.0% | |
| AATTCCCTTCCCCCAATAAC+AGG | + | chr1.3:79213809-79213828 | None:intergenic | 45.0% | |
| ACCTATGGCAACATATGAGG+AGG | - | chr1.3:79213523-79213542 | MS.gene046142:CDS | 45.0% | |
| ACCTCCTCATATGTTGCCAT+AGG | + | chr1.3:79213527-79213546 | None:intergenic | 45.0% | |
| ATTGCAAAATCCGAGGGAGA+TGG | - | chr1.3:79215571-79215590 | MS.gene046142:intron | 45.0% | |
| CAACACCACCTAGTGGTATA+GGG | - | chr1.3:79216175-79216194 | MS.gene046142:intron | 45.0% | |
| CACCCAAAACCAAACAGAAG+TGG | - | chr1.3:79216629-79216648 | MS.gene046142:intron | 45.0% | |
| CGAGAGATTAGTAGGACCAT+TGG | - | chr1.3:79216713-79216732 | MS.gene046142:intron | 45.0% | |
| CTCAGCAATGGGATCATCTT+CGG | - | chr1.3:79216376-79216395 | MS.gene046142:intron | 45.0% | |
| CTTGTTCCAGAGTTCACCAA+TGG | + | chr1.3:79216732-79216751 | None:intergenic | 45.0% | |
| GAGCAGGATAGTTTAGGAAC+TGG | + | chr1.3:79216838-79216857 | None:intergenic | 45.0% | |
| GATTCCTGTTATTGGGGGAA+GGG | - | chr1.3:79213802-79213821 | MS.gene046142:intron | 45.0% | |
| GCAATCCATTGCAAAATCCG+AGG | - | chr1.3:79215564-79215583 | MS.gene046142:intron | 45.0% | |
| GCTCAAAGCTGTCTCTTTCA+TGG | + | chr1.3:79213486-79213505 | None:intergenic | 45.0% | |
| GCTGTCTCTTTCATGGGTAA+TGG | + | chr1.3:79213479-79213498 | None:intergenic | 45.0% | |
| GGGGTGTAGTTGCAATTGTT+TGG | - | chr1.3:79214735-79214754 | MS.gene046142:intron | 45.0% | |
| GTACCTCTCTTTGTCCTTCA+CGG | + | chr1.3:79217109-79217128 | None:intergenic | 45.0% | |
| GTTAGCAGGAACACTATGGT+GGG | + | chr1.3:79216531-79216550 | None:intergenic | 45.0% | |
| TCAAACCCTATACCACTAGG+TGG | + | chr1.3:79216183-79216202 | None:intergenic | 45.0% | |
| TCAACACCACCTAGTGGTAT+AGG | - | chr1.3:79216174-79216193 | MS.gene046142:intron | 45.0% | |
| TCAGGAAATCGCTGTTGAAG+TGG | + | chr1.3:79217195-79217214 | None:intergenic | 45.0% | |
| TCATTGCCTGTTATGGGAGT+TGG | - | chr1.3:79217336-79217355 | MS.gene046142:CDS | 45.0% | |
| TCTCTGATTTCTTCCTGCGT+CGG | + | chr1.3:79216589-79216608 | None:intergenic | 45.0% | |
| TCTCTTGTGCTCTCAGCAAT+GGG | - | chr1.3:79216365-79216384 | MS.gene046142:intron | 45.0% | |
| TCTTTGCAGAACAGCATCCA+AGG | - | chr1.3:79216663-79216682 | MS.gene046142:intron | 45.0% | |
| TGCAGGATTCCTGTTATTGG+GGG | - | chr1.3:79213797-79213816 | MS.gene046142:intron | 45.0% | |
| TGTTAGCAGGAACACTATGG+TGG | + | chr1.3:79216532-79216551 | None:intergenic | 45.0% | |
| TGTTATTGGGGGAAGGGAAT+TGG | - | chr1.3:79213808-79213827 | MS.gene046142:intron | 45.0% | |
| TTAACCTGTCGGGATATTGG+GGG | - | chr1.3:79214827-79214846 | MS.gene046142:intron | 45.0% | |
| TTCTCTTGTGCTCTCAGCAA+TGG | - | chr1.3:79216364-79216383 | MS.gene046142:intron | 45.0% | |
| TTGAAGTGACTTCTCGTGGA+GGG | - | chr1.3:79213849-79213868 | MS.gene046142:intron | 45.0% | |
| ! | ATCTCCCTCGGATTTTGCAA+TGG | + | chr1.3:79215572-79215591 | None:intergenic | 45.0% |
| ! | CGCCTCAGTGTCCTATATTT+TGG | + | chr1.3:79213974-79213993 | None:intergenic | 45.0% |
| ! | GAAGCATTTGTAGCCGTTGA+TGG | + | chr1.3:79214301-79214320 | None:intergenic | 45.0% |
| !! | AAAGAGACAGCTTTGAGCCA+TGG | - | chr1.3:79213488-79213507 | MS.gene046142:CDS | 45.0% |
| !! | GAAAACTGCATCTTTGGAGC+AGG | + | chr1.3:79214531-79214550 | None:intergenic | 45.0% |
| !! | TAAATGAAAAATTATAATAA+TGG | - | chr1.3:79215708-79215727 | MS.gene046142:intron | 5.0% |
| AAAACCTCTTCACCGAGGGA+AGG | - | chr1.3:79216688-79216707 | MS.gene046142:intron | 50.0% | |
| AAGCCGTGAAGGACAAAGAG+AGG | - | chr1.3:79217103-79217122 | MS.gene046142:intron | 50.0% | |
| AGGCTAAAACCTCTTCACCG+AGG | - | chr1.3:79216683-79216702 | MS.gene046142:intron | 50.0% | |
| AGGTTGTCGGGGTCATTGAT+GGG | - | chr1.3:79216408-79216427 | MS.gene046142:CDS | 50.0% | |
| ATCATCTTCGGCAGGATCTC+AGG | - | chr1.3:79216388-79216407 | MS.gene046142:intron | 50.0% | |
| CATGGGCACCAAGTTCATGT+AGG | - | chr1.3:79213598-79213617 | MS.gene046142:CDS | 50.0% | |
| GAGAAGCTCCACACTCTCAT+GGG | - | chr1.3:79213581-79213600 | MS.gene046142:CDS | 50.0% | |
| GCAAAGCAAAGACCTTCAGG+CGG | + | chr1.3:79214612-79214631 | None:intergenic | 50.0% | |
| GGAAGGACCGAGAGATTAGT+AGG | - | chr1.3:79216705-79216724 | MS.gene046142:intron | 50.0% | |
| GGATTCCTGTTATTGGGGGA+AGG | - | chr1.3:79213801-79213820 | MS.gene046142:intron | 50.0% | |
| GGCAGACTCTCTTCAAACTC+CGG | - | chr1.3:79217242-79217261 | MS.gene046142:CDS | 50.0% | |
| GGCTAAAACCTCTTCACCGA+GGG | - | chr1.3:79216684-79216703 | MS.gene046142:intron | 50.0% | |
| GTAGGACCATTGGTGAACTC+TGG | - | chr1.3:79216723-79216742 | MS.gene046142:intron | 50.0% | |
| GTTAATTCTGCTCCGCCTGA+AGG | - | chr1.3:79214597-79214616 | MS.gene046142:intron | 50.0% | |
| GTTGAAGTGACTTCTCGTGG+AGG | - | chr1.3:79213848-79213867 | MS.gene046142:intron | 50.0% | |
| TAACCTGTCGGGATATTGGG+GGG | - | chr1.3:79214828-79214847 | MS.gene046142:intron | 50.0% | |
| TAATCTCTCGGTCCTTCCCT+CGG | + | chr1.3:79216703-79216722 | None:intergenic | 50.0% | |
| TCAGCACCAACTCCCATAAC+AGG | + | chr1.3:79217345-79217364 | None:intergenic | 50.0% | |
| TTGCAGTCAACACCACCTAG+TGG | - | chr1.3:79216168-79216187 | MS.gene046142:intron | 50.0% | |
| !! | CGGTGAAGAGGTTTTAGCCT+TGG | + | chr1.3:79216683-79216702 | None:intergenic | 50.0% |
| !!! | CTGTTTGGTTTTGGGTGAGC+AGG | + | chr1.3:79216626-79216645 | None:intergenic | 50.0% |
| AACAACGTGACCGCCTCTGT+CGG | - | chr1.3:79216551-79216570 | MS.gene046142:intron | 55.0% | |
| CAGGTTGTCGGGGTCATTGA+TGG | - | chr1.3:79216407-79216426 | MS.gene046142:CDS | 55.0% | |
| CCAAGTTCATGTAGGCTCCC+TGG | - | chr1.3:79213606-79213625 | MS.gene046142:CDS | 55.0% | |
| CCAGGGAGCCTACATGAACT+TGG | + | chr1.3:79213609-79213628 | None:intergenic | 55.0% | |
| CCGGAGCAGAGTAGTTCAGA+CGG | - | chr1.3:79217261-79217280 | MS.gene046142:CDS | 55.0% | |
| CCGTCTGAACTACTCTGCTC+CGG | + | chr1.3:79217264-79217283 | None:intergenic | 55.0% | |
| CGGTGTGTAGACACACAGTC+AGG | + | chr1.3:79216991-79217010 | None:intergenic | 55.0% | |
| GCAATGGGATCATCTTCGGC+AGG | - | chr1.3:79216380-79216399 | MS.gene046142:intron | 55.0% | |
| GGAGAAGCTCCACACTCTCA+TGG | - | chr1.3:79213580-79213599 | MS.gene046142:CDS | 55.0% | |
| ! | GCGGTCACGTTGTTGTTAGC+AGG | + | chr1.3:79216545-79216564 | None:intergenic | 55.0% |
| ! | GCTGGCAGCACAGGATTTTG+TGG | + | chr1.3:79216506-79216525 | None:intergenic | 55.0% |
| ! | GGAACACTATGGTGGGATGC+TGG | + | chr1.3:79216524-79216543 | None:intergenic | 55.0% |
| ! | TCGGCAGGATCTCAGGTTGT+CGG | - | chr1.3:79216395-79216414 | MS.gene046142:intron | 55.0% |
| !! | ACTTGGTGCCCATGAGAGTG+TGG | + | chr1.3:79213592-79213611 | None:intergenic | 55.0% |
| !! | GCATCTTTGGAGCAGGAGCT+GGG | + | chr1.3:79214524-79214543 | None:intergenic | 55.0% |
| !! | TGCATCTTTGGAGCAGGAGC+TGG | + | chr1.3:79214525-79214544 | None:intergenic | 55.0% |
| ACGATGGACACCGACAGAGG+CGG | + | chr1.3:79216564-79216583 | None:intergenic | 60.0% | |
| TCACCCCCCAATATCCCGAC+AGG | + | chr1.3:79214834-79214853 | None:intergenic | 60.0% | |
| ! | CGGCAGGATCTCAGGTTGTC+GGG | - | chr1.3:79216396-79216415 | MS.gene046142:intron | 60.0% |
| ! | GGCAGGATCTCAGGTTGTCG+GGG | - | chr1.3:79216397-79216416 | MS.gene046142:intron | 60.0% |
| !! | CTTTGGAGCAGGAGCTGGGA+TGG | + | chr1.3:79214520-79214539 | None:intergenic | 60.0% |
| CGGTCCTTCCCTCGGTGAAG+AGG | + | chr1.3:79216695-79216714 | None:intergenic | 65.0% | |
| GCGACGATGGACACCGACAG+AGG | + | chr1.3:79216567-79216586 | None:intergenic | 65.0% | |
| TGGTGGGATGCTGGCAGCAC+AGG | + | chr1.3:79216515-79216534 | None:intergenic | 65.0% | |
| ! | TCTTCCTGCGTCGGCGACGA+TGG | + | chr1.3:79216580-79216599 | None:intergenic | 65.0% |
| GTGTCCATCGTCGCCGACGC+AGG | - | chr1.3:79216573-79216592 | MS.gene046142:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 79213446 | 79217371 | 79213446 | ID=MS.gene046142 |
| chr1.3 | mRNA | 79213446 | 79217371 | 79213446 | ID=MS.gene046142.t1;Parent=MS.gene046142 |
| chr1.3 | exon | 79217202 | 79217371 | 79217202 | ID=MS.gene046142.t1.exon1;Parent=MS.gene046142.t1 |
| chr1.3 | CDS | 79217202 | 79217371 | 79217202 | ID=cds.MS.gene046142.t1;Parent=MS.gene046142.t1 |
| chr1.3 | exon | 79216937 | 79217015 | 79216937 | ID=MS.gene046142.t1.exon2;Parent=MS.gene046142.t1 |
| chr1.3 | CDS | 79216937 | 79217015 | 79216937 | ID=cds.MS.gene046142.t1;Parent=MS.gene046142.t1 |
| chr1.3 | exon | 79216405 | 79216567 | 79216405 | ID=MS.gene046142.t1.exon3;Parent=MS.gene046142.t1 |
| chr1.3 | CDS | 79216405 | 79216567 | 79216405 | ID=cds.MS.gene046142.t1;Parent=MS.gene046142.t1 |
| chr1.3 | exon | 79216199 | 79216321 | 79216199 | ID=MS.gene046142.t1.exon4;Parent=MS.gene046142.t1 |
| chr1.3 | CDS | 79216199 | 79216321 | 79216199 | ID=cds.MS.gene046142.t1;Parent=MS.gene046142.t1 |
| chr1.3 | exon | 79214045 | 79214436 | 79214045 | ID=MS.gene046142.t1.exon5;Parent=MS.gene046142.t1 |
| chr1.3 | CDS | 79214045 | 79214436 | 79214045 | ID=cds.MS.gene046142.t1;Parent=MS.gene046142.t1 |
| chr1.3 | exon | 79213446 | 79213727 | 79213446 | ID=MS.gene046142.t1.exon6;Parent=MS.gene046142.t1 |
| chr1.3 | CDS | 79213446 | 79213727 | 79213446 | ID=cds.MS.gene046142.t1;Parent=MS.gene046142.t1 |
| Gene Sequence |
| Protein sequence |
