Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene046314.t1 | KEH32953.1 | 86.7 | 279 | 28 | 1 | 1 | 279 | 27 | 296 | 1.10E-128 | 469.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene046314.t1 | Q42485 | 37.6 | 109 | 52 | 2 | 70 | 163 | 64 | 171 | 1.6e-08 | 61.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene046314.t1 | A0A072UV80 | 86.7 | 279 | 28 | 1 | 1 | 279 | 27 | 296 | 7.6e-129 | 469.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene046314.t1 | TF | C2H2 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene046314.t1 | MTR_3g011990 | 87.814 | 279 | 25 | 1 | 1 | 279 | 27 | 296 | 0.0 | 500 |
| MS.gene046314.t1 | MTR_8g466760 | 84.229 | 279 | 36 | 1 | 1 | 279 | 27 | 297 | 1.53e-172 | 478 |
| MS.gene046314.t1 | MTR_3g011970 | 72.727 | 286 | 62 | 3 | 1 | 279 | 27 | 303 | 1.63e-129 | 370 |
| MS.gene046314.t1 | MTR_3g012010 | 69.072 | 291 | 66 | 6 | 1 | 279 | 27 | 305 | 2.88e-128 | 367 |
| MS.gene046314.t1 | MTR_3g009410 | 65.744 | 289 | 79 | 8 | 2 | 279 | 28 | 307 | 1.06e-111 | 325 |
| MS.gene046314.t1 | MTR_5g008310 | 52.802 | 339 | 96 | 7 | 1 | 279 | 1 | 335 | 1.93e-100 | 297 |
| MS.gene046314.t1 | MTR_5g008320 | 53.116 | 337 | 97 | 6 | 1 | 279 | 1 | 334 | 5.30e-93 | 278 |
| MS.gene046314.t1 | MTR_7g026977 | 56.296 | 270 | 84 | 7 | 8 | 269 | 93 | 336 | 8.35e-85 | 258 |
| MS.gene046314.t1 | MTR_7g022960 | 56.489 | 262 | 91 | 7 | 27 | 279 | 41 | 288 | 9.29e-80 | 243 |
| MS.gene046314.t1 | MTR_7g022980 | 50.178 | 281 | 90 | 9 | 8 | 279 | 33 | 272 | 1.27e-65 | 206 |
| MS.gene046314.t1 | MTR_7g023010 | 46.619 | 281 | 92 | 9 | 8 | 279 | 33 | 264 | 1.97e-63 | 200 |
| MS.gene046314.t1 | MTR_5g008280 | 50.193 | 259 | 74 | 10 | 33 | 241 | 8 | 261 | 1.23e-61 | 199 |
| MS.gene046314.t1 | MTR_5g008280 | 49.630 | 135 | 52 | 5 | 151 | 279 | 263 | 387 | 4.12e-22 | 95.1 |
| MS.gene046314.t1 | MTR_5g008390 | 62.626 | 99 | 25 | 1 | 61 | 159 | 3 | 89 | 6.40e-35 | 121 |
| MS.gene046314.t1 | MTR_7g026710 | 49.682 | 157 | 65 | 6 | 127 | 279 | 14 | 160 | 8.56e-30 | 110 |
| MS.gene046314.t1 | MTR_7g026700 | 48.101 | 158 | 67 | 7 | 127 | 279 | 14 | 161 | 1.61e-26 | 102 |
| MS.gene046314.t1 | MTR_8g466770 | 70.370 | 54 | 16 | 0 | 74 | 127 | 77 | 130 | 4.17e-21 | 87.0 |
| MS.gene046314.t1 | MTR_1g013130 | 39.823 | 113 | 53 | 4 | 64 | 162 | 86 | 197 | 5.52e-15 | 73.2 |
| MS.gene046314.t1 | MTR_1g107055 | 39.583 | 96 | 51 | 2 | 71 | 166 | 63 | 151 | 1.06e-12 | 65.9 |
| MS.gene046314.t1 | MTR_4g006575 | 45.882 | 85 | 32 | 4 | 69 | 151 | 64 | 136 | 3.23e-12 | 65.1 |
| MS.gene046314.t1 | MTR_4g006600 | 45.882 | 85 | 32 | 4 | 69 | 151 | 64 | 136 | 3.23e-12 | 65.1 |
| MS.gene046314.t1 | MTR_2g104900 | 41.935 | 93 | 38 | 3 | 69 | 151 | 78 | 164 | 1.63e-11 | 63.2 |
| MS.gene046314.t1 | MTR_3g106230 | 37.374 | 99 | 39 | 2 | 66 | 146 | 66 | 159 | 3.13e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene046314.t1 | AT1G80730 | 37.168 | 113 | 55 | 2 | 66 | 163 | 60 | 171 | 1.12e-12 | 66.2 |
| MS.gene046314.t1 | AT5G01860 | 68.421 | 38 | 12 | 0 | 71 | 108 | 64 | 101 | 1.70e-12 | 65.5 |
| MS.gene046314.t1 | AT5G10970 | 35.780 | 109 | 66 | 3 | 70 | 177 | 100 | 205 | 4.60e-12 | 65.1 |
| MS.gene046314.t1 | AT5G25160 | 43.678 | 87 | 44 | 4 | 63 | 145 | 49 | 134 | 7.48e-12 | 64.3 |
| MS.gene046314.t1 | AT5G27880 | 54.386 | 57 | 23 | 1 | 74 | 130 | 80 | 133 | 1.31e-11 | 63.9 |
| MS.gene046314.t1 | AT1G24625 | 38.614 | 101 | 41 | 4 | 52 | 141 | 28 | 118 | 3.26e-11 | 62.0 |
Find 64 sgRNAs with CRISPR-Local
Find 69 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTCAATGAAGAGAAGAATT+TGG | 0.201357 | 3.4:-8260249 | MS.gene046314:CDS |
| GATGATGGTGCTTCAGGTTT+AGG | 0.213401 | 3.4:-8260104 | MS.gene046314:CDS |
| AAACTGTGTGGGGTAATCTT+AGG | 0.228026 | 3.4:+8259984 | None:intergenic |
| AAGATTACCCCACACAGTTT+TGG | 0.280652 | 3.4:-8259981 | MS.gene046314:CDS |
| ATGATGGTGCTTCAGGTTTA+GGG | 0.292878 | 3.4:-8260103 | MS.gene046314:CDS |
| GTTCCGCCTTGTGAGCATTC+TGG | 0.293208 | 3.4:+8260159 | None:intergenic |
| ATTGGTGCAATGCTAAAATT+AGG | 0.304816 | 3.4:-8259786 | MS.gene046314:CDS |
| AGGTATGATGATGGTGCTTC+AGG | 0.309881 | 3.4:-8260110 | MS.gene046314:CDS |
| GGTGGTACAAATAATAAAAT+TGG | 0.315699 | 3.4:-8259804 | MS.gene046314:CDS |
| TTTCCTTGATTGTTGTCATT+AGG | 0.336005 | 3.4:+8260281 | None:intergenic |
| AGGGGTGGTAACAGCGGGTT+TGG | 0.340009 | 3.4:-8259894 | MS.gene046314:CDS |
| TAGATCATGAATACCATCTT+TGG | 0.348347 | 3.4:+8259689 | None:intergenic |
| TGACAACTTCATGAAATCAA+TGG | 0.381820 | 3.4:+8260385 | None:intergenic |
| GTAATCTTAGGGCTAAAATA+AGG | 0.401113 | 3.4:+8259996 | None:intergenic |
| CATGAAATCAATGGGTTTGT+CGG | 0.413662 | 3.4:+8260394 | None:intergenic |
| TTGCTTCATTGAGAAATATG+AGG | 0.417907 | 3.4:-8259914 | MS.gene046314:CDS |
| GACAACTTCATGAAATCAAT+GGG | 0.421311 | 3.4:+8260386 | None:intergenic |
| GACGATGAACCAATTTGAAT+GGG | 0.422269 | 3.4:+8260311 | None:intergenic |
| ATGAAATCAATGGGTTTGTC+GGG | 0.431271 | 3.4:+8260395 | None:intergenic |
| TTTCCTAATGACAACAATCA+AGG | 0.441970 | 3.4:-8260284 | MS.gene046314:CDS |
| ATTCTCTACTTCACAAGCAT+TGG | 0.443427 | 3.4:-8260189 | MS.gene046314:CDS |
| TGCTCTTGCAACTTCGACAC+GGG | 0.458755 | 3.4:+8260347 | None:intergenic |
| TTCTCTACTTCACAAGCATT+GGG | 0.462768 | 3.4:-8260188 | MS.gene046314:CDS |
| AACTGTGTGGGGTAATCTTA+GGG | 0.464573 | 3.4:+8259985 | None:intergenic |
| AGAGAATTGTCTCTTACAAA+AGG | 0.466075 | 3.4:+8260205 | None:intergenic |
| AGACGATGAACCAATTTGAA+TGG | 0.482754 | 3.4:+8260310 | None:intergenic |
| CCTTATGATTATAGTTCACT+CGG | 0.486258 | 3.4:-8260050 | MS.gene046314:CDS |
| AAGGTGGTGCAAGTACTTCA+AGG | 0.489306 | 3.4:-8259833 | MS.gene046314:CDS |
| CCGAGTGAACTATAATCATA+AGG | 0.501901 | 3.4:+8260050 | None:intergenic |
| GCTCCTACTTCTACCAAAGA+TGG | 0.531766 | 3.4:-8259702 | MS.gene046314:CDS |
| TCGGTGGTGCAAGTACTTCA+AGG | 0.532445 | 3.4:-8259860 | MS.gene046314:CDS |
| TGCTTCATTGAGAAATATGA+GGG | 0.532522 | 3.4:-8259913 | MS.gene046314:CDS |
| CTTATGATTATAGTTCACTC+GGG | 0.536404 | 3.4:-8260049 | MS.gene046314:CDS |
| TTTCTCAATGAAGCAAGAGA+AGG | 0.547522 | 3.4:+8259921 | None:intergenic |
| TTCTCAATGAAGCAAGAGAA+GGG | 0.558954 | 3.4:+8259922 | None:intergenic |
| GACGGTACCCAAAACTGTGT+GGG | 0.561677 | 3.4:+8259973 | None:intergenic |
| GCAAGTACTTCAAGGATTGA+AGG | 0.568493 | 3.4:-8259825 | MS.gene046314:CDS |
| GCAAGTACTTCAAGGATTGA+AGG | 0.568493 | 3.4:-8259852 | MS.gene046314:CDS |
| ATATGAGGGGTGGTAACAGC+GGG | 0.569644 | 3.4:-8259899 | MS.gene046314:CDS |
| GTGCTCTTGCAACTTCGACA+CGG | 0.570780 | 3.4:+8260346 | None:intergenic |
| CGGAAACAAAGGTATGATGA+TGG | 0.586182 | 3.4:-8260119 | MS.gene046314:CDS |
| GGGTTTGGAAACCTAGGTAT+CGG | 0.586346 | 3.4:-8259879 | MS.gene046314:CDS |
| TAGAAAAGCAACGGAAACAA+AGG | 0.606956 | 3.4:-8260130 | MS.gene046314:CDS |
| TACTTGCACCACCGATACCT+AGG | 0.614177 | 3.4:+8259868 | None:intergenic |
| ATACCATCTTTGGTAGAAGT+AGG | 0.614243 | 3.4:+8259699 | None:intergenic |
| TGACGGTACCCAAAACTGTG+TGG | 0.621693 | 3.4:+8259972 | None:intergenic |
| TGGTATTCATGATCTATCAA+AGG | 0.623851 | 3.4:-8259682 | MS.gene046314:CDS |
| ATCTTAGGGCTAAAATAAGG+TGG | 0.624011 | 3.4:+8259999 | None:intergenic |
| TCAGATGATTCAGAATCAGA+AGG | 0.636973 | 3.4:+8259642 | None:intergenic |
| CTTGCAACAAAGCACTATGA+CGG | 0.651264 | 3.4:+8259955 | None:intergenic |
| TCATTGAGAAATATGAGGGG+TGG | 0.653640 | 3.4:-8259909 | MS.gene046314:CDS |
| TTTGGAAACCTAGGTATCGG+TGG | 0.657683 | 3.4:-8259876 | MS.gene046314:CDS |
| AACGTGCTATAGAAAAGCAA+CGG | 0.662928 | 3.4:-8260139 | MS.gene046314:CDS |
| TCTACTTCACAAGCATTGGG+AGG | 0.664622 | 3.4:-8260185 | MS.gene046314:CDS |
| ACGGTACCCAAAACTGTGTG+GGG | 0.666056 | 3.4:+8259974 | None:intergenic |
| AATATGAGGGGTGGTAACAG+CGG | 0.669747 | 3.4:-8259900 | MS.gene046314:CDS |
| AACAGCGGGTTTGGAAACCT+AGG | 0.670930 | 3.4:-8259885 | MS.gene046314:CDS |
| AGGACACCAGAATGCTCACA+AGG | 0.673314 | 3.4:-8260165 | MS.gene046314:CDS |
| TTATGATTATAGTTCACTCG+GGG | 0.683240 | 3.4:-8260048 | MS.gene046314:CDS |
| ACGATGAACCAATTTGAATG+GGG | 0.690761 | 3.4:+8260312 | None:intergenic |
| AGTACTTCAAGGATTGAAGG+TGG | 0.697813 | 3.4:-8259849 | MS.gene046314:CDS |
| AGTACTTCAAGGATTGAAGG+TGG | 0.714441 | 3.4:-8259822 | MS.gene046314:CDS |
| ACACCAGAATGCTCACAAGG+CGG | 0.738475 | 3.4:-8260162 | MS.gene046314:CDS |
| GCTTCATTGAGAAATATGAG+GGG | 0.751842 | 3.4:-8259912 | MS.gene046314:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CATAGAAAAACAAATTATTG+TGG | - | chr3.4:8260327-8260346 | MS.gene046314:CDS | 20.0% |
| ! | GGTGGTACAAATAATAAAAT+TGG | - | chr3.4:8260247-8260266 | MS.gene046314:CDS | 25.0% |
| AGAGAATTGTCTCTTACAAA+AGG | + | chr3.4:8259849-8259868 | None:intergenic | 30.0% | |
| ATTGGTGCAATGCTAAAATT+AGG | - | chr3.4:8260265-8260284 | MS.gene046314:CDS | 30.0% | |
| CCTTATGATTATAGTTCACT+CGG | - | chr3.4:8260001-8260020 | MS.gene046314:CDS | 30.0% | |
| CTTATGATTATAGTTCACTC+GGG | - | chr3.4:8260002-8260021 | MS.gene046314:CDS | 30.0% | |
| GACAACTTCATGAAATCAAT+GGG | + | chr3.4:8259668-8259687 | None:intergenic | 30.0% | |
| GTAATCTTAGGGCTAAAATA+AGG | + | chr3.4:8260058-8260077 | None:intergenic | 30.0% | |
| TAGATCATGAATACCATCTT+TGG | + | chr3.4:8260365-8260384 | None:intergenic | 30.0% | |
| TGACAACTTCATGAAATCAA+TGG | + | chr3.4:8259669-8259688 | None:intergenic | 30.0% | |
| TGCTTCATTGAGAAATATGA+GGG | - | chr3.4:8260138-8260157 | MS.gene046314:CDS | 30.0% | |
| TGGTATTCATGATCTATCAA+AGG | - | chr3.4:8260369-8260388 | MS.gene046314:CDS | 30.0% | |
| TTATGATTATAGTTCACTCG+GGG | - | chr3.4:8260003-8260022 | MS.gene046314:CDS | 30.0% | |
| TTGCTTCATTGAGAAATATG+AGG | - | chr3.4:8260137-8260156 | MS.gene046314:CDS | 30.0% | |
| TTTCCTAATGACAACAATCA+AGG | - | chr3.4:8259767-8259786 | MS.gene046314:CDS | 30.0% | |
| TTTCCTTGATTGTTGTCATT+AGG | + | chr3.4:8259773-8259792 | None:intergenic | 30.0% | |
| !! | TGGTTTTTGAATCATTGACT+CGG | + | chr3.4:8260035-8260054 | None:intergenic | 30.0% |
| !!! | TTGCAAGAGCACAATTTTTT+CGG | - | chr3.4:8259716-8259735 | MS.gene046314:CDS | 30.0% |
| AACGTGCTATAGAAAAGCAA+CGG | - | chr3.4:8259912-8259931 | MS.gene046314:CDS | 35.0% | |
| ACGATGAACCAATTTGAATG+GGG | + | chr3.4:8259742-8259761 | None:intergenic | 35.0% | |
| AGACGATGAACCAATTTGAA+TGG | + | chr3.4:8259744-8259763 | None:intergenic | 35.0% | |
| ATACCATCTTTGGTAGAAGT+AGG | + | chr3.4:8260355-8260374 | None:intergenic | 35.0% | |
| ATCTTAGGGCTAAAATAAGG+TGG | + | chr3.4:8260055-8260074 | None:intergenic | 35.0% | |
| ATTCTCTACTTCACAAGCAT+TGG | - | chr3.4:8259862-8259881 | MS.gene046314:CDS | 35.0% | |
| CCGAGTGAACTATAATCATA+AGG | + | chr3.4:8260004-8260023 | None:intergenic | 35.0% | |
| CGTCAATGAAGAGAAGAATT+TGG | - | chr3.4:8259802-8259821 | MS.gene046314:CDS | 35.0% | |
| GACGATGAACCAATTTGAAT+GGG | + | chr3.4:8259743-8259762 | None:intergenic | 35.0% | |
| GCTTCATTGAGAAATATGAG+GGG | - | chr3.4:8260139-8260158 | MS.gene046314:CDS | 35.0% | |
| TAGAAAAGCAACGGAAACAA+AGG | - | chr3.4:8259921-8259940 | MS.gene046314:CDS | 35.0% | |
| TCAGATGATTCAGAATCAGA+AGG | + | chr3.4:8260412-8260431 | None:intergenic | 35.0% | |
| TCATAAGGTCGAAAAAGAGT+AGG | + | chr3.4:8259989-8260008 | None:intergenic | 35.0% | |
| TTCTCAATGAAGCAAGAGAA+GGG | + | chr3.4:8260132-8260151 | None:intergenic | 35.0% | |
| TTCTCTACTTCACAAGCATT+GGG | - | chr3.4:8259863-8259882 | MS.gene046314:CDS | 35.0% | |
| TTTCTCAATGAAGCAAGAGA+AGG | + | chr3.4:8260133-8260152 | None:intergenic | 35.0% | |
| ! | ATGAAATCAATGGGTTTGTC+GGG | + | chr3.4:8259659-8259678 | None:intergenic | 35.0% |
| ! | CATGAAATCAATGGGTTTGT+CGG | + | chr3.4:8259660-8259679 | None:intergenic | 35.0% |
| AAACTGTGTGGGGTAATCTT+AGG | + | chr3.4:8260070-8260089 | None:intergenic | 40.0% | |
| AACTGTGTGGGGTAATCTTA+GGG | + | chr3.4:8260069-8260088 | None:intergenic | 40.0% | |
| AGTACTTCAAGGATTGAAGG+TGG | - | chr3.4:8260202-8260221 | MS.gene046314:CDS | 40.0% | |
| GCAAGTACTTCAAGGATTGA+AGG | - | chr3.4:8260199-8260218 | MS.gene046314:CDS | 40.0% | |
| TCATTGAGAAATATGAGGGG+TGG | - | chr3.4:8260142-8260161 | MS.gene046314:CDS | 40.0% | |
| ! | AAGATTACCCCACACAGTTT+TGG | - | chr3.4:8260070-8260089 | MS.gene046314:CDS | 40.0% |
| ! | AGATTACCCCACACAGTTTT+GGG | - | chr3.4:8260071-8260090 | MS.gene046314:CDS | 40.0% |
| ! | ATGATGGTGCTTCAGGTTTA+GGG | - | chr3.4:8259948-8259967 | MS.gene046314:CDS | 40.0% |
| ! | CGGAAACAAAGGTATGATGA+TGG | - | chr3.4:8259932-8259951 | MS.gene046314:CDS | 40.0% |
| ! | CTTGCAACAAAGCACTATGA+CGG | + | chr3.4:8260099-8260118 | None:intergenic | 40.0% |
| !! | TTTTTCGGCCCCATTCAAAT+TGG | - | chr3.4:8259731-8259750 | MS.gene046314:CDS | 40.0% |
| !!! | TTTGTCGGGTTTTGAGTTTG+AGG | + | chr3.4:8259645-8259664 | None:intergenic | 40.0% |
| AAGGTGGTGCAAGTACTTCA+AGG | - | chr3.4:8260218-8260237 | MS.gene046314:CDS | 45.0% | |
| AATATGAGGGGTGGTAACAG+CGG | - | chr3.4:8260151-8260170 | MS.gene046314:CDS | 45.0% | |
| GCTCCTACTTCTACCAAAGA+TGG | - | chr3.4:8260349-8260368 | MS.gene046314:CDS | 45.0% | |
| GGGTTTGGAAACCTAGGTAT+CGG | - | chr3.4:8260172-8260191 | MS.gene046314:CDS | 45.0% | |
| ! | GATGATGGTGCTTCAGGTTT+AGG | - | chr3.4:8259947-8259966 | MS.gene046314:CDS | 45.0% |
| !! | AGGTATGATGATGGTGCTTC+AGG | - | chr3.4:8259941-8259960 | MS.gene046314:CDS | 45.0% |
| !! | TCTACTTCACAAGCATTGGG+AGG | - | chr3.4:8259866-8259885 | MS.gene046314:CDS | 45.0% |
| !! | TTTGGAAACCTAGGTATCGG+TGG | - | chr3.4:8260175-8260194 | MS.gene046314:CDS | 45.0% |
| ACACCAGAATGCTCACAAGG+CGG | - | chr3.4:8259889-8259908 | MS.gene046314:CDS | 50.0% | |
| ACGGTACCCAAAACTGTGTG+GGG | + | chr3.4:8260080-8260099 | None:intergenic | 50.0% | |
| AGGACACCAGAATGCTCACA+AGG | - | chr3.4:8259886-8259905 | MS.gene046314:CDS | 50.0% | |
| ATATGAGGGGTGGTAACAGC+GGG | - | chr3.4:8260152-8260171 | MS.gene046314:CDS | 50.0% | |
| GACGGTACCCAAAACTGTGT+GGG | + | chr3.4:8260081-8260100 | None:intergenic | 50.0% | |
| GTGCTCTTGCAACTTCGACA+CGG | + | chr3.4:8259708-8259727 | None:intergenic | 50.0% | |
| TACTTGCACCACCGATACCT+AGG | + | chr3.4:8260186-8260205 | None:intergenic | 50.0% | |
| TCGGTGGTGCAAGTACTTCA+AGG | - | chr3.4:8260191-8260210 | MS.gene046314:CDS | 50.0% | |
| TGACGGTACCCAAAACTGTG+TGG | + | chr3.4:8260082-8260101 | None:intergenic | 50.0% | |
| TGCTCTTGCAACTTCGACAC+GGG | + | chr3.4:8259707-8259726 | None:intergenic | 50.0% | |
| ! | AACAGCGGGTTTGGAAACCT+AGG | - | chr3.4:8260166-8260185 | MS.gene046314:CDS | 50.0% |
| GTTCCGCCTTGTGAGCATTC+TGG | + | chr3.4:8259895-8259914 | None:intergenic | 55.0% | |
| ! | AGGGGTGGTAACAGCGGGTT+TGG | - | chr3.4:8260157-8260176 | MS.gene046314:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 8259617 | 8260456 | 8259617 | ID=MS.gene046314 |
| chr3.4 | mRNA | 8259617 | 8260456 | 8259617 | ID=MS.gene046314.t1;Parent=MS.gene046314 |
| chr3.4 | exon | 8259617 | 8260456 | 8259617 | ID=MS.gene046314.t1.exon1;Parent=MS.gene046314.t1 |
| chr3.4 | CDS | 8259617 | 8260456 | 8259617 | ID=cds.MS.gene046314.t1;Parent=MS.gene046314.t1 |
| Gene Sequence |
| Protein sequence |
