Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene046869.t1 | XP_024626574.1 | 60.7 | 356 | 43 | 3 | 1 | 355 | 1 | 260 | 7.60E-76 | 295.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene046869.t1 | Q9SZL8 | 38.6 | 158 | 94 | 3 | 214 | 369 | 77 | 233 | 3.6e-18 | 95.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene046869.t1 | A0A072TYR1 | 61.6 | 354 | 44 | 3 | 1 | 353 | 1 | 263 | 4.6e-75 | 292.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene046869.t1 | TF | FAR1 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene046869.t1 | MTR_7g446520 | 74.178 | 213 | 37 | 1 | 160 | 372 | 38 | 232 | 6.45e-102 | 317 |
| MS.gene046869.t1 | MTR_7g446520 | 70.213 | 47 | 14 | 0 | 57 | 103 | 15 | 61 | 2.39e-13 | 72.4 |
| MS.gene046869.t1 | MTR_7g028855 | 75.234 | 214 | 51 | 1 | 140 | 353 | 52 | 263 | 1.54e-100 | 318 |
| MS.gene046869.t1 | MTR_7g028855 | 57.143 | 126 | 29 | 4 | 1 | 125 | 1 | 102 | 9.29e-28 | 117 |
| MS.gene046869.t1 | MTR_7g446480 | 44.195 | 267 | 83 | 6 | 134 | 400 | 50 | 250 | 2.16e-48 | 174 |
| MS.gene046869.t1 | MTR_7g446480 | 58.197 | 122 | 33 | 3 | 1 | 122 | 1 | 104 | 1.83e-29 | 120 |
| MS.gene046869.t1 | MTR_7g446510 | 81.395 | 86 | 16 | 0 | 287 | 372 | 155 | 240 | 6.47e-40 | 150 |
| MS.gene046869.t1 | MTR_7g446510 | 65.421 | 107 | 20 | 1 | 394 | 483 | 51 | 157 | 1.03e-34 | 135 |
| MS.gene046869.t1 | MTR_1g070355 | 37.888 | 161 | 100 | 0 | 212 | 372 | 76 | 236 | 2.18e-29 | 124 |
| MS.gene046869.t1 | MTR_5g076070 | 31.841 | 201 | 134 | 1 | 175 | 375 | 21 | 218 | 1.52e-26 | 110 |
| MS.gene046869.t1 | MTR_8g467420 | 46.988 | 83 | 43 | 1 | 193 | 274 | 61 | 143 | 2.20e-19 | 86.7 |
| MS.gene046869.t1 | MTR_6g022080 | 24.419 | 172 | 130 | 0 | 201 | 372 | 76 | 247 | 2.12e-16 | 80.1 |
| MS.gene046869.t1 | MTR_6g053140 | 29.189 | 185 | 104 | 4 | 137 | 321 | 47 | 204 | 1.17e-14 | 74.3 |
| MS.gene046869.t1 | MTR_0402s0040 | 34.568 | 162 | 94 | 4 | 214 | 370 | 30 | 184 | 1.33e-14 | 77.8 |
| MS.gene046869.t1 | MTR_3g448650 | 41.176 | 85 | 50 | 0 | 201 | 285 | 73 | 157 | 4.80e-14 | 71.6 |
| MS.gene046869.t1 | MTR_0060s0090 | 38.750 | 80 | 49 | 0 | 213 | 292 | 59 | 138 | 5.96e-14 | 70.5 |
| MS.gene046869.t1 | MTR_2g098880 | 39.450 | 109 | 64 | 2 | 204 | 311 | 55 | 162 | 1.14e-12 | 69.3 |
| MS.gene046869.t1 | MTR_2g101460 | 37.838 | 111 | 69 | 0 | 201 | 311 | 36 | 146 | 1.16e-12 | 68.2 |
| MS.gene046869.t1 | MTR_2g098880 | 39.450 | 109 | 64 | 2 | 204 | 311 | 67 | 174 | 1.55e-12 | 68.9 |
| MS.gene046869.t1 | MTR_8g468460 | 46.914 | 81 | 41 | 2 | 368 | 447 | 26 | 105 | 2.09e-12 | 64.7 |
| MS.gene046869.t1 | MTR_6g051425 | 30.128 | 156 | 105 | 3 | 218 | 370 | 25 | 179 | 2.99e-12 | 69.3 |
| MS.gene046869.t1 | MTR_2g101460 | 37.838 | 111 | 69 | 0 | 201 | 311 | 46 | 156 | 4.16e-12 | 66.6 |
| MS.gene046869.t1 | MTR_3g080590 | 49.153 | 59 | 30 | 0 | 203 | 261 | 98 | 156 | 4.42e-12 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene046869.t1 | AT4G38180 | 38.608 | 158 | 94 | 3 | 214 | 369 | 77 | 233 | 2.02e-16 | 84.3 |
| MS.gene046869.t1 | AT3G07500 | 36.567 | 134 | 79 | 4 | 183 | 315 | 8 | 136 | 3.51e-11 | 64.3 |
Find 167 sgRNAs with CRISPR-Local
Find 269 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACAATGTCTTTACTGATTT+TGG | 0.059598 | 6.1:-58618385 | MS.gene046869:CDS |
| ATCCTTCTCTCACGTCTTTC+TGG | 0.088031 | 6.1:+58615354 | None:intergenic |
| ATCCTTCTCCCACGTCTTTC+TGG | 0.095830 | 6.1:+58615456 | None:intergenic |
| ATCCTTCTCCCACGTCTTTC+TGG | 0.095830 | 6.1:+58615558 | None:intergenic |
| ATCCTCCTCCCACGTCTTTC+TGG | 0.104496 | 6.1:+58615150 | None:intergenic |
| ATCCTTCTCCCACGTCTTTC+TGG | 0.118623 | 6.1:+58615660 | None:intergenic |
| TGTTCACTACAGACCTAAAA+AGG | 0.207179 | 6.1:-58617528 | MS.gene046869:CDS |
| AATAAGAACTTGTCATATAA+TGG | 0.247315 | 6.1:-58617369 | MS.gene046869:CDS |
| CCCACGTCTTTCTGGCTATC+AGG | 0.264446 | 6.1:+58615668 | None:intergenic |
| TGCATTTACACCATGTTTAT+CGG | 0.290641 | 6.1:-58617442 | MS.gene046869:CDS |
| ATCCTTCTCCCACGTCTCTT+TGG | 0.296957 | 6.1:+58615762 | None:intergenic |
| AGACGTGGCAGGAGGATTAA+AGG | 0.308394 | 6.1:-58615063 | MS.gene046869:CDS |
| TTGCAGGGAAGTGTCCAAAA+AGG | 0.313369 | 6.1:-58616013 | MS.gene046869:CDS |
| AGTGATGATGGTGGTTGTTC+TGG | 0.317361 | 6.1:-58618154 | MS.gene046869:CDS |
| CATTAACTGCTGAAGGAATA+AGG | 0.318241 | 6.1:-58617784 | MS.gene046869:CDS |
| TGCTGAAGGAATAAGGAAAA+TGG | 0.318497 | 6.1:-58617777 | MS.gene046869:CDS |
| CTGTTAGGAAGAGTGATATT+AGG | 0.340554 | 6.1:-58617691 | MS.gene046869:CDS |
| TGGCTAGCACTCTGAGACAT+AGG | 0.369422 | 6.1:+58615089 | None:intergenic |
| TGGCTAGCATGCTGAGACAT+AGG | 0.372735 | 6.1:+58615272 | None:intergenic |
| CCCACGTCTCTTTGGCTATC+GGG | 0.373225 | 6.1:+58615770 | None:intergenic |
| CATTGGTTGGAGTTGGTTCA+TGG | 0.393477 | 6.1:+58617468 | None:intergenic |
| GGAAGTAGATTCTAAGTTGA+TGG | 0.394286 | 6.1:-58616079 | MS.gene046869:CDS |
| TCCCACGTCTCTTTGGCTAT+CGG | 0.401616 | 6.1:+58615769 | None:intergenic |
| TGGCTAGCATGCTGAGACAT+TGG | 0.402894 | 6.1:+58615578 | None:intergenic |
| ATAAGAACTTGTCATATAAT+GGG | 0.403187 | 6.1:-58617368 | MS.gene046869:CDS |
| GGTACACCGGAACATGATTA+CGG | 0.407134 | 6.1:-58618364 | MS.gene046869:CDS |
| AGCATTTATCAAGGTTAGAT+AGG | 0.409294 | 6.1:-58617601 | MS.gene046869:CDS |
| GATTATAGTGCTGGTGATAA+AGG | 0.421954 | 6.1:-58618130 | MS.gene046869:CDS |
| TATAAGTACGGTAAGTGTAA+TGG | 0.430620 | 6.1:-58617719 | MS.gene046869:CDS |
| GGATGACATACAAAAGCTTC+GGG | 0.433073 | 6.1:-58615968 | MS.gene046869:CDS |
| GAGAGAAGAAGCATTTATCA+AGG | 0.445750 | 6.1:-58617610 | MS.gene046869:CDS |
| AGACGTGGGAGGAGGATCAA+AGG | 0.446373 | 6.1:-58615144 | MS.gene046869:CDS |
| GATATTAGGCGCAATGTTAA+CGG | 0.449906 | 6.1:-58617677 | MS.gene046869:CDS |
| ATGTTGACTGCTTGCAGCAC+AGG | 0.458698 | 6.1:+58615202 | None:intergenic |
| ATGTTGACTGCTTGCAGCAC+AGG | 0.458698 | 6.1:+58615304 | None:intergenic |
| TGGATGACATACAAAAGCTT+CGG | 0.464217 | 6.1:-58615969 | MS.gene046869:CDS |
| GGGATACATGGTGGCTCAGA+AGG | 0.464555 | 6.1:-58617348 | MS.gene046869:CDS |
| TGGCTAGCATGCTGAGACAT+GGG | 0.464703 | 6.1:+58615170 | None:intergenic |
| TAGTGAACACGGAGCCTAGC+TGG | 0.466097 | 6.1:+58617542 | None:intergenic |
| GATGAGCGATATGATGAAAC+TGG | 0.468588 | 6.1:-58618187 | MS.gene046869:CDS |
| TTGATGGAGATTGCTCGATA+TGG | 0.468688 | 6.1:-58616063 | MS.gene046869:CDS |
| TCTTGAATGTGGACTATTGT+GGG | 0.469444 | 6.1:-58616101 | MS.gene046869:CDS |
| TGGCTAACATGCTGAGACAT+TGG | 0.469646 | 6.1:+58615476 | None:intergenic |
| CGAGGCTGCTGAAATCTATA+CGG | 0.472424 | 6.1:-58616419 | MS.gene046869:CDS |
| GCAGATGAGTTGTCAGCATA+GGG | 0.474170 | 6.1:+58616455 | None:intergenic |
| AAACATACCCGATCATTGTT+GGG | 0.478091 | 6.1:-58618315 | MS.gene046869:CDS |
| GTAGATAAAGCACAGATTGA+TGG | 0.478198 | 6.1:-58617407 | MS.gene046869:CDS |
| GACGTGAGAGAAGGATCAAA+GGG | 0.480590 | 6.1:-58615347 | MS.gene046869:CDS |
| GTAAAACCGTAATCATGTTC+CGG | 0.482660 | 6.1:+58618358 | None:intergenic |
| TGCACAACATTGGTTGGAGT+TGG | 0.485450 | 6.1:+58617461 | None:intergenic |
| GACGTGGCAGGAGGATTAAA+GGG | 0.486674 | 6.1:-58615062 | MS.gene046869:CDS |
| CTGGCTAGCATGCTGAGACA+TGG | 0.489602 | 6.1:+58615169 | None:intergenic |
| TGTTCTGGTGATTATAGTGC+TGG | 0.489646 | 6.1:-58618139 | MS.gene046869:CDS |
| TTCTTGAATGTGGACTATTG+TGG | 0.490201 | 6.1:-58616102 | MS.gene046869:CDS |
| CCACCACTCCCAACAATGAT+CGG | 0.491029 | 6.1:+58618307 | None:intergenic |
| AGACGTGAGAGAAGGATCAA+AGG | 0.494945 | 6.1:-58615348 | MS.gene046869:CDS |
| AGACGTGGGAGAAGGATCAA+AGG | 0.494945 | 6.1:-58615552 | MS.gene046869:CDS |
| AGACGTGGGAGAAGGATCAA+AGG | 0.494945 | 6.1:-58615756 | MS.gene046869:CDS |
| TAGCTTGTATGCTGATGTGC+TGG | 0.499229 | 6.1:-58615989 | MS.gene046869:CDS |
| GAAACATACCCGATCATTGT+TGG | 0.501949 | 6.1:-58618316 | MS.gene046869:CDS |
| GCAGTATGTATGCAACAAGC+AGG | 0.502107 | 6.1:-58617639 | MS.gene046869:CDS |
| GGTACTTACGTTCATATTCA+CGG | 0.502731 | 6.1:+58615001 | None:intergenic |
| TGTAGTTGTTGGTGAGGAAA+TGG | 0.504666 | 6.1:-58617819 | MS.gene046869:CDS |
| GAAGATGATGATGTAGTTGT+TGG | 0.505754 | 6.1:-58617830 | MS.gene046869:CDS |
| GTGAAAGAAGAGATTATGAA+AGG | 0.507624 | 6.1:-58616379 | MS.gene046869:CDS |
| GACGTGGGAGGAGGATCAAA+GGG | 0.511280 | 6.1:-58615143 | MS.gene046869:CDS |
| AAGAATACTCAAGGGAATAC+AGG | 0.512005 | 6.1:-58618211 | MS.gene046869:CDS |
| TAGTCAAAGCGAGGTTATCA+AGG | 0.514496 | 6.1:-58615036 | MS.gene046869:CDS |
| AGGGTGGATATCCACGTGTT+GGG | 0.516854 | 6.1:-58617328 | MS.gene046869:CDS |
| ATAAATTCATTAACTGCTGA+AGG | 0.519495 | 6.1:-58617791 | MS.gene046869:CDS |
| TGGCTAGAATACTGAGACAT+GGG | 0.519558 | 6.1:+58615374 | None:intergenic |
| GACGTGGGAGGAGGATCAAA+GGG | 0.523575 | 6.1:-58615245 | MS.gene046869:CDS |
| CCGATCATTGTTGGGAGTGG+TGG | 0.525336 | 6.1:-58618307 | MS.gene046869:CDS |
| GACGTGGGAGAAGGATCAAA+GGG | 0.526228 | 6.1:-58615755 | MS.gene046869:CDS |
| CACCACTCCCAACAATGATC+GGG | 0.527208 | 6.1:+58618308 | None:intergenic |
| TGGCTATCAGGCTGAGACAT+GGG | 0.531630 | 6.1:+58615680 | None:intergenic |
| CAACAATTCAGTGTTCGTGC+AGG | 0.532910 | 6.1:-58616246 | MS.gene046869:CDS |
| GAAGGTGAACGTGATGGAGG+TGG | 0.540140 | 6.1:-58618007 | MS.gene046869:CDS |
| AGCCAGAAAGACGTGGGAGG+AGG | 0.544096 | 6.1:-58615152 | MS.gene046869:CDS |
| CGCAGATGAGTTGTCAGCAT+AGG | 0.545517 | 6.1:+58616454 | None:intergenic |
| TACCCGATCATTGTTGGGAG+TGG | 0.548290 | 6.1:-58618310 | MS.gene046869:CDS |
| AGACGTGGGAGGAGGATCAA+AGG | 0.549459 | 6.1:-58615246 | MS.gene046869:CDS |
| TTGTCATATAATGGGATACA+TGG | 0.555297 | 6.1:-58617360 | MS.gene046869:CDS |
| CTGGCTAGAATACTGAGACA+TGG | 0.555888 | 6.1:+58615373 | None:intergenic |
| AGCCAGAAAGACGTGGGAGA+AGG | 0.560631 | 6.1:-58615662 | MS.gene046869:CDS |
| AGCCAAAGAGACGTGGGAGA+AGG | 0.560631 | 6.1:-58615764 | MS.gene046869:CDS |
| GAAGATTGGTTTCTTGAATG+TGG | 0.561039 | 6.1:-58616112 | MS.gene046869:CDS |
| AAGGGTGGATATCCACGTGT+TGG | 0.561325 | 6.1:-58617329 | MS.gene046869:CDS |
| CTGGCTATCAGGCTGAGACA+TGG | 0.561329 | 6.1:+58615679 | None:intergenic |
| TGCAGGAAATTTGAATCTCG+AGG | 0.563863 | 6.1:-58616229 | MS.gene046869:CDS |
| GACGTGGGAGAAGGATCAAA+GGG | 0.564696 | 6.1:-58615551 | MS.gene046869:CDS |
| AGCCAGAAAGACGTGGGAGA+AGG | 0.570261 | 6.1:-58615458 | MS.gene046869:CDS |
| AGCCAGAAAGACGTGGGAGA+AGG | 0.570261 | 6.1:-58615560 | MS.gene046869:CDS |
| TTGTTGGTGAGGAAATGGTA+AGG | 0.572827 | 6.1:-58617814 | MS.gene046869:CDS |
| TACATGGTGGCTCAGAAGGG+TGG | 0.573659 | 6.1:-58617344 | MS.gene046869:CDS |
| GCAGGAAATTTGAATCTCGA+GGG | 0.574935 | 6.1:-58616228 | MS.gene046869:CDS |
| AGAAAGATGCTCAGTGCTTG+CGG | 0.575791 | 6.1:+58615502 | None:intergenic |
| AGAAAGATGCTCAGTGCTTG+CGG | 0.575791 | 6.1:+58615706 | None:intergenic |
| GCCTGATAGCCAGAAAGACG+TGG | 0.578633 | 6.1:-58615669 | MS.gene046869:CDS |
| AGCCAGAAAGACGTGAGAGA+AGG | 0.578754 | 6.1:-58615356 | MS.gene046869:CDS |
| GGTGAACGTGATGGAGGTGG+AGG | 0.578985 | 6.1:-58618004 | MS.gene046869:CDS |
| AATTATACGAAGAATACTCA+AGG | 0.584441 | 6.1:-58618220 | MS.gene046869:CDS |
| CAGTATGTATGCAACAAGCA+GGG | 0.584535 | 6.1:-58617638 | MS.gene046869:CDS |
| GCCCGATAGCCAAAGAGACG+TGG | 0.586320 | 6.1:-58615771 | MS.gene046869:CDS |
| GATGAACGTGAAGGTGATGA+AGG | 0.589312 | 6.1:-58618025 | MS.gene046869:CDS |
| GATGAAGGTGAACGTGATGA+AGG | 0.589312 | 6.1:-58618070 | MS.gene046869:CDS |
| GGTGATAAAGGTGAAGATGA+TGG | 0.589452 | 6.1:-58618118 | MS.gene046869:CDS |
| GCATGCTAGCCAGAAAGACG+TGG | 0.591586 | 6.1:-58615159 | MS.gene046869:CDS |
| GCATGCTAGCCAGAAAGACG+TGG | 0.591586 | 6.1:-58615567 | MS.gene046869:CDS |
| GGTGATGAAGGTGAACGTGA+TGG | 0.592735 | 6.1:-58618013 | MS.gene046869:CDS |
| GCATGTTAGCCAGAAAGACG+TGG | 0.594069 | 6.1:-58615465 | MS.gene046869:CDS |
| GTTGACAAAATATCTTGAGG+AGG | 0.598346 | 6.1:-58616302 | MS.gene046869:CDS |
| AGTAAAGGTCATGCTAGTGA+AGG | 0.607475 | 6.1:-58617914 | MS.gene046869:CDS |
| AGTGAAGGTGATGAAAGTAA+AGG | 0.609097 | 6.1:-58617929 | MS.gene046869:CDS |
| GGAGACAATGAAAGTGATGA+TGG | 0.609236 | 6.1:-58618166 | MS.gene046869:CDS |
| TGTAAATGCACAACATTGGT+TGG | 0.612165 | 6.1:+58617455 | None:intergenic |
| GGATACATGGTGGCTCAGAA+GGG | 0.612576 | 6.1:-58617347 | MS.gene046869:CDS |
| AATCTGTGCTTTATCTACCT+CGG | 0.613894 | 6.1:+58617412 | None:intergenic |
| AGTGAAGGTCATGGTAGTGA+AGG | 0.614950 | 6.1:-58617869 | MS.gene046869:CDS |
| TCTGCGATGTCTTGAACGCG+AGG | 0.617404 | 6.1:-58616437 | MS.gene046869:CDS |
| GATGAAAGTCAAGGTGATGA+AGG | 0.618015 | 6.1:-58618085 | MS.gene046869:CDS |
| TTCTTAGTGAACCCAACACG+TGG | 0.622503 | 6.1:+58617317 | None:intergenic |
| GATGAAGGTGAACGTGATGG+AGG | 0.625527 | 6.1:-58618010 | MS.gene046869:CDS |
| AGTATGTATGCAACAAGCAG+GGG | 0.634341 | 6.1:-58617637 | MS.gene046869:CDS |
| TTGACAAAATATCTTGAGGA+GGG | 0.634347 | 6.1:-58616301 | MS.gene046869:CDS |
| CCCGATAGCCAAAGAGACGT+GGG | 0.644492 | 6.1:-58615770 | MS.gene046869:CDS |
| CTCGTACAAAGTGTCCAGCT+AGG | 0.644688 | 6.1:-58617556 | MS.gene046869:CDS |
| CAGGAAATTTGAATCTCGAG+GGG | 0.648693 | 6.1:-58616227 | MS.gene046869:intron |
| GAAGTTGACAAAATATCTTG+AGG | 0.651334 | 6.1:-58616305 | MS.gene046869:CDS |
| ATGGTGTAAATGCACAACAT+TGG | 0.661572 | 6.1:+58617451 | None:intergenic |
| ATTATACGAAGAATACTCAA+GGG | 0.665058 | 6.1:-58618219 | MS.gene046869:CDS |
| TGATGATGTAGTTGTTGGTG+AGG | 0.665725 | 6.1:-58617825 | MS.gene046869:CDS |
| GGTGATGAAAGTGAAGGTCA+TGG | 0.667300 | 6.1:-58617878 | MS.gene046869:CDS |
| TCATATAATGGGATACATGG+TGG | 0.669224 | 6.1:-58617357 | MS.gene046869:CDS |
| CAAAGGGAGGCAAATCAAAG+AGG | 0.670795 | 6.1:-58615535 | MS.gene046869:CDS |
| GTGAGAGAAGGATCAAAGGG+AGG | 0.677696 | 6.1:-58615344 | MS.gene046869:CDS |
| AAAGGGAGGTAGTCAAAGCG+AGG | 0.678188 | 6.1:-58615045 | MS.gene046869:CDS |
| CTTGAATGTGGACTATTGTG+GGG | 0.678410 | 6.1:-58616100 | MS.gene046869:CDS |
| GATGATGATGATGTGAGTCA+TGG | 0.679569 | 6.1:-58618244 | MS.gene046869:CDS |
| GGTGAACGTGATGAAGGTGA+AGG | 0.680195 | 6.1:-58618064 | MS.gene046869:CDS |
| CAAAGGGAGGAAAATCAAAG+AGG | 0.680357 | 6.1:-58615739 | MS.gene046869:CDS |
| TTAACGGTGAGATTGTAATG+AGG | 0.680367 | 6.1:-58617661 | MS.gene046869:CDS |
| AGGTGTTGCACTGAGTGTGA+AGG | 0.686205 | 6.1:-58616359 | MS.gene046869:CDS |
| GGTGAAGGTGATAAAAGTGA+AGG | 0.687900 | 6.1:-58618049 | MS.gene046869:CDS |
| CAGATGAGTTGTCAGCATAG+GGG | 0.688109 | 6.1:+58616456 | None:intergenic |
| CATGTTAGCCAGAAAGACGT+GGG | 0.690821 | 6.1:-58615464 | MS.gene046869:CDS |
| CCTGATAGCCAGAAAGACGT+GGG | 0.690821 | 6.1:-58615668 | MS.gene046869:CDS |
| GCTAGCCAGAAAGACGTGGG+AGG | 0.694454 | 6.1:-58615155 | MS.gene046869:CDS |
| CATGCTAGCCAGAAAGACGT+GGG | 0.697336 | 6.1:-58615158 | MS.gene046869:CDS |
| CATGCTAGCCAGAAAGACGT+GGG | 0.697336 | 6.1:-58615566 | MS.gene046869:CDS |
| AGTGAAGGTCATGCTAGTGA+AGG | 0.698593 | 6.1:-58617944 | MS.gene046869:CDS |
| GTGGCAGGAGGATTAAAGGG+AGG | 0.699976 | 6.1:-58615059 | MS.gene046869:CDS |
| GGTGGAGGTGATGAAAGTGA+AGG | 0.700815 | 6.1:-58617989 | MS.gene046869:CDS |
| TGTTTATCGGAAAATATCCG+AGG | 0.704996 | 6.1:-58617429 | MS.gene046869:CDS |
| GTGGGAGAAGGATCAAAGGG+AGG | 0.706029 | 6.1:-58615548 | MS.gene046869:CDS |
| AGTGAAGGTGATGAACGTGA+AGG | 0.706496 | 6.1:-58618034 | MS.gene046869:CDS |
| GACAATGAAAGTGATGATGG+TGG | 0.706532 | 6.1:-58618163 | MS.gene046869:CDS |
| GTGGGAGAAGGATCAAAGGG+AGG | 0.709029 | 6.1:-58615752 | MS.gene046869:CDS |
| ATTGATGGTCTTAAGTCACA+CGG | 0.709760 | 6.1:-58617392 | MS.gene046869:CDS |
| GTGGGAGGAGGATCAAAGGG+AGG | 0.710691 | 6.1:-58615140 | MS.gene046869:CDS |
| GTGGGAGGAGGATCAAAGGG+AGG | 0.710691 | 6.1:-58615242 | MS.gene046869:CDS |
| AGTGAAGGTGATGAAAGTGA+AGG | 0.717258 | 6.1:-58617884 | MS.gene046869:CDS |
| AGTGAAGGTGATGAAAGTGA+AGG | 0.717258 | 6.1:-58617959 | MS.gene046869:CDS |
| AGTGAAGGTGATGAAAGTGA+AGG | 0.717258 | 6.1:-58617974 | MS.gene046869:CDS |
| AGTGAAGGTGATGAAAGTGA+AGG | 0.731903 | 6.1:-58617899 | MS.gene046869:CDS |
| AGTGAATGCGATGAAAGTCA+AGG | 0.740679 | 6.1:-58618094 | MS.gene046869:CDS |
| ACTTTGTACGAGTGATACGT+CGG | 0.754568 | 6.1:+58617567 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCAACACAAAAAAAAATAT+GGG | + | chr6.1:58617174-58617193 | None:intergenic | 15.0% |
| !!! | TACGATTTTTATTATAAGTA+CGG | - | chr6.1:58615635-58615654 | MS.gene046869:CDS | 15.0% |
| !! | AAACAATAGAAACTTATATG+TGG | - | chr6.1:58616382-58616401 | MS.gene046869:CDS | 20.0% |
| !! | AAATCATAAAGAGTTATGTT+AGG | - | chr6.1:58616787-58616806 | MS.gene046869:intron | 20.0% |
| !! | AACAATAGAAACTTATATGT+GGG | - | chr6.1:58616383-58616402 | MS.gene046869:CDS | 20.0% |
| !! | AATAAGAACTTGTCATATAA+TGG | - | chr6.1:58615997-58616016 | MS.gene046869:CDS | 20.0% |
| !! | ATAAGAACTTGTCATATAAT+GGG | - | chr6.1:58615998-58616017 | MS.gene046869:CDS | 20.0% |
| !! | CTTCAACACAAAAAAAAATA+TGG | + | chr6.1:58617175-58617194 | None:intergenic | 20.0% |
| !!! | AGCAATTTACTCTAATTTTA+CGG | - | chr6.1:58616596-58616615 | MS.gene046869:intron | 20.0% |
| !!! | CATATTTTTTTTTGTGTTGA+AGG | - | chr6.1:58617173-58617192 | MS.gene046869:intron | 20.0% |
| ! | AATTATACGAAGAATACTCA+AGG | - | chr6.1:58615146-58615165 | MS.gene046869:CDS | 25.0% |
| ! | ACTTAACATTCAGATAGTTT+AGG | + | chr6.1:58616131-58616150 | None:intergenic | 25.0% |
| ! | ATAAATTCATTAACTGCTGA+AGG | - | chr6.1:58615575-58615594 | MS.gene046869:CDS | 25.0% |
| ! | ATATGAGAACAAAGAATTGT+GGG | - | chr6.1:58616695-58616714 | MS.gene046869:intron | 25.0% |
| ! | ATTATACGAAGAATACTCAA+GGG | - | chr6.1:58615147-58615166 | MS.gene046869:CDS | 25.0% |
| ! | CCAACAATGTGTTTAAATAT+AGG | - | chr6.1:58618386-58618405 | MS.gene046869:CDS | 25.0% |
| ! | CCTATATTTAAACACATTGT+TGG | + | chr6.1:58618389-58618408 | None:intergenic | 25.0% |
| ! | CTTAACATTCAGATAGTTTA+GGG | + | chr6.1:58616130-58616149 | None:intergenic | 25.0% |
| !! | AATTTACTCTAATTTTACGG+AGG | - | chr6.1:58616599-58616618 | MS.gene046869:intron | 25.0% |
| !! | ATGTGTTTACAAATTTTTGC+AGG | - | chr6.1:58617337-58617356 | MS.gene046869:CDS | 25.0% |
| !! | TGTGTTTACAAATTTTTGCA+GGG | - | chr6.1:58617338-58617357 | MS.gene046869:CDS | 25.0% |
| !! | TTCTTTGTTCTCATATGTTT+TGG | + | chr6.1:58616691-58616710 | None:intergenic | 25.0% |
| !!! | AACAATGTCTTTACTGATTT+TGG | - | chr6.1:58614981-58615000 | MS.gene046869:intron | 25.0% |
| !!! | ACGTTTGAAATGTCTATTTT+GGG | - | chr6.1:58616200-58616219 | MS.gene046869:intron | 25.0% |
| AAGAGTTATGTTAGGAAGAA+AGG | - | chr6.1:58616795-58616814 | MS.gene046869:intron | 30.0% | |
| AGCATTTATCAAGGTTAGAT+AGG | - | chr6.1:58615765-58615784 | MS.gene046869:CDS | 30.0% | |
| CAAAAAAAAATATGGGAGCA+TGG | + | chr6.1:58617167-58617186 | None:intergenic | 30.0% | |
| CAAATATAACTGTTTGTGAG+TGG | + | chr6.1:58616341-58616360 | None:intergenic | 30.0% | |
| CACTCACAAACAGTTATATT+TGG | - | chr6.1:58616339-58616358 | MS.gene046869:CDS | 30.0% | |
| CATATGAGAACAAAGAATTG+TGG | - | chr6.1:58616694-58616713 | MS.gene046869:intron | 30.0% | |
| GAAGTTGACAAAATATCTTG+AGG | - | chr6.1:58617061-58617080 | MS.gene046869:intron | 30.0% | |
| GAATATTCACAAAAGGAATG+TGG | + | chr6.1:58616165-58616184 | None:intergenic | 30.0% | |
| GTGAAAGAAGAGATTATGAA+AGG | - | chr6.1:58616987-58617006 | MS.gene046869:intron | 30.0% | |
| TATAAGTACGGTAAGTGTAA+TGG | - | chr6.1:58615647-58615666 | MS.gene046869:CDS | 30.0% | |
| TGCATTTACACCATGTTTAT+CGG | - | chr6.1:58615924-58615943 | MS.gene046869:intron | 30.0% | |
| TGCTCCAAAGAAGAATAAAA+AGG | - | chr6.1:58617509-58617528 | MS.gene046869:CDS | 30.0% | |
| TTGACAAAATATCTTGAGGA+GGG | - | chr6.1:58617065-58617084 | MS.gene046869:intron | 30.0% | |
| ! | ACCAGTTTTCTAGATTGTAT+GGG | - | chr6.1:58616411-58616430 | MS.gene046869:CDS | 30.0% |
| ! | AGGATGAATTTGAAGAGTTT+TGG | - | chr6.1:58616619-58616638 | MS.gene046869:intron | 30.0% |
| ! | AGTGCCTTTTTATTCTTCTT+TGG | + | chr6.1:58617516-58617535 | None:intergenic | 30.0% |
| ! | CAGAACATGTCTTTTTCTTT+GGG | + | chr6.1:58618255-58618274 | None:intergenic | 30.0% |
| ! | GATGAATTTGAAGAGTTTTG+GGG | - | chr6.1:58616621-58616640 | MS.gene046869:intron | 30.0% |
| ! | GGATGAATTTGAAGAGTTTT+GGG | - | chr6.1:58616620-58616639 | MS.gene046869:intron | 30.0% |
| ! | TTGTCATATAATGGGATACA+TGG | - | chr6.1:58616006-58616025 | MS.gene046869:CDS | 30.0% |
| !! | AATGTTTGATTTTGTTGCGT+TGG | - | chr6.1:58617220-58617239 | MS.gene046869:intron | 30.0% |
| !! | AGATCAGATTATTTCTGCTT+TGG | - | chr6.1:58616237-58616256 | MS.gene046869:CDS | 30.0% |
| !! | ATGAATTTGAAGAGTTTTGG+GGG | - | chr6.1:58616622-58616641 | MS.gene046869:intron | 30.0% |
| !! | ATTTCTACACAATTTTGACG+AGG | - | chr6.1:58616830-58616849 | MS.gene046869:intron | 30.0% |
| !! | GACGTTTGAAATGTCTATTT+TGG | - | chr6.1:58616199-58616218 | MS.gene046869:intron | 30.0% |
| !! | TTGTAGCTGATTTTAAATCC+AGG | - | chr6.1:58616880-58616899 | MS.gene046869:intron | 30.0% |
| !!! | AAGAATTCAGCTTTTTTGGA+AGG | - | chr6.1:58616564-58616583 | MS.gene046869:intron | 30.0% |
| !!! | TGTCAAGAATTCAGCTTTTT+TGG | - | chr6.1:58616560-58616579 | MS.gene046869:intron | 30.0% |
| AAACATACCCGATCATTGTT+GGG | - | chr6.1:58615051-58615070 | MS.gene046869:CDS | 35.0% | |
| AAGAATACTCAAGGGAATAC+AGG | - | chr6.1:58615155-58615174 | MS.gene046869:CDS | 35.0% | |
| AATCTGTGCTTTATCTACCT+CGG | + | chr6.1:58615957-58615976 | None:intergenic | 35.0% | |
| AGTGAAGGTGATGAAAGTAA+AGG | - | chr6.1:58615437-58615456 | MS.gene046869:CDS | 35.0% | |
| AGTGGCAGAATATTCACAAA+AGG | + | chr6.1:58616172-58616191 | None:intergenic | 35.0% | |
| ATGGTGTAAATGCACAACAT+TGG | + | chr6.1:58615918-58615937 | None:intergenic | 35.0% | |
| CAGTAACAATTGGAACTTCA+GGG | + | chr6.1:58617437-58617456 | None:intergenic | 35.0% | |
| CATTAACTGCTGAAGGAATA+AGG | - | chr6.1:58615582-58615601 | MS.gene046869:CDS | 35.0% | |
| CGCAACAAAATCAAACATTC+TGG | + | chr6.1:58617219-58617238 | None:intergenic | 35.0% | |
| CTGTTAGGAAGAGTGATATT+AGG | - | chr6.1:58615675-58615694 | MS.gene046869:CDS | 35.0% | |
| GATATTAGGCGCAATGTTAA+CGG | - | chr6.1:58615689-58615708 | MS.gene046869:CDS | 35.0% | |
| GGTACTTACGTTCATATTCA+CGG | + | chr6.1:58618368-58618387 | None:intergenic | 35.0% | |
| GTAAAACCGTAATCATGTTC+CGG | + | chr6.1:58615011-58615030 | None:intergenic | 35.0% | |
| GTAGATAAAGCACAGATTGA+TGG | - | chr6.1:58615959-58615978 | MS.gene046869:intron | 35.0% | |
| GTGAAGGAAAAAGAAGTGAA+TGG | - | chr6.1:58617023-58617042 | MS.gene046869:intron | 35.0% | |
| GTTCACTACAGACCTAAAAA+GGG | - | chr6.1:58615839-58615858 | MS.gene046869:intron | 35.0% | |
| GTTCAGTTTCCAGTAACAAT+TGG | + | chr6.1:58617447-58617466 | None:intergenic | 35.0% | |
| GTTGACAAAATATCTTGAGG+AGG | - | chr6.1:58617064-58617083 | MS.gene046869:intron | 35.0% | |
| TCCCATACAATCTAGAAAAC+TGG | + | chr6.1:58616415-58616434 | None:intergenic | 35.0% | |
| TGCTGAAGGAATAAGGAAAA+TGG | - | chr6.1:58615589-58615608 | MS.gene046869:CDS | 35.0% | |
| TGGATGACATACAAAAGCTT+CGG | - | chr6.1:58617397-58617416 | MS.gene046869:CDS | 35.0% | |
| TGTAAATGCACAACATTGGT+TGG | + | chr6.1:58615914-58615933 | None:intergenic | 35.0% | |
| TGTTACTGGAAACTGAACAA+TGG | - | chr6.1:58617449-58617468 | MS.gene046869:CDS | 35.0% | |
| TGTTCACTACAGACCTAAAA+AGG | - | chr6.1:58615838-58615857 | MS.gene046869:intron | 35.0% | |
| TGTTTATCGGAAAATATCCG+AGG | - | chr6.1:58615937-58615956 | MS.gene046869:intron | 35.0% | |
| TTAACGGTGAGATTGTAATG+AGG | - | chr6.1:58615705-58615724 | MS.gene046869:CDS | 35.0% | |
| ! | ACAGCATATCTACCCTTTTT+AGG | + | chr6.1:58615854-58615873 | None:intergenic | 35.0% |
| ! | ACTAATGCGTGCTGTTATTA+AGG | - | chr6.1:58616086-58616105 | MS.gene046869:CDS | 35.0% |
| ! | AGTGTCTACGGAACATTTTA+TGG | + | chr6.1:58617549-58617568 | None:intergenic | 35.0% |
| ! | ATTGATGGTCTTAAGTCACA+CGG | - | chr6.1:58615974-58615993 | MS.gene046869:CDS | 35.0% |
| ! | CGGATATTTTCCGATAAACA+TGG | + | chr6.1:58615937-58615956 | None:intergenic | 35.0% |
| ! | GAAGATGATGATGTAGTTGT+TGG | - | chr6.1:58615536-58615555 | MS.gene046869:CDS | 35.0% |
| ! | GACCAGTTTTCTAGATTGTA+TGG | - | chr6.1:58616410-58616429 | MS.gene046869:CDS | 35.0% |
| ! | GCAGAACATGTCTTTTTCTT+TGG | + | chr6.1:58618256-58618275 | None:intergenic | 35.0% |
| ! | GGAACATGATTACGGTTTTA+CGG | - | chr6.1:58615010-58615029 | MS.gene046869:CDS | 35.0% |
| ! | GGAAGTAGATTCTAAGTTGA+TGG | - | chr6.1:58617287-58617306 | MS.gene046869:intron | 35.0% |
| ! | TCATATAATGGGATACATGG+TGG | - | chr6.1:58616009-58616028 | MS.gene046869:CDS | 35.0% |
| ! | TCTTGAATGTGGACTATTGT+GGG | - | chr6.1:58617265-58617284 | MS.gene046869:intron | 35.0% |
| ! | TTCTTGAATGTGGACTATTG+TGG | - | chr6.1:58617264-58617283 | MS.gene046869:intron | 35.0% |
| !! | AAATGTCTATTTTGGGCAGA+TGG | - | chr6.1:58616207-58616226 | MS.gene046869:intron | 35.0% |
| !! | AATTTTGACGAGGAAATGAG+AGG | - | chr6.1:58616840-58616859 | MS.gene046869:intron | 35.0% |
| !! | GAAGATTGGTTTCTTGAATG+TGG | - | chr6.1:58617254-58617273 | MS.gene046869:intron | 35.0% |
| !! | GAGAGAAGAAGCATTTATCA+AGG | - | chr6.1:58615756-58615775 | MS.gene046869:CDS | 35.0% |
| !! | GATTATAGTGCTGGTGATAA+AGG | - | chr6.1:58615236-58615255 | MS.gene046869:CDS | 35.0% |
| !! | TTATTTCTGCTTTGGCTATG+TGG | - | chr6.1:58616245-58616264 | MS.gene046869:CDS | 35.0% |
| !! | TTTTAGGTCTGTAGTGAACA+CGG | + | chr6.1:58615838-58615857 | None:intergenic | 35.0% |
| !!! | AGTGTAATGGTTTTGCTGTT+AGG | - | chr6.1:58615660-58615679 | MS.gene046869:CDS | 35.0% |
| !!! | CTTTACTGATTTTGGTACAC+CGG | - | chr6.1:58614989-58615008 | MS.gene046869:intron | 35.0% |
| !!! | GCTGTGTCTATTTTTGAAGA+GGG | - | chr6.1:58615869-58615888 | MS.gene046869:intron | 35.0% |
| !!! | TCATATGTTTTGGTAACCCA+TGG | + | chr6.1:58616681-58616700 | None:intergenic | 35.0% |
| !!! | TGAATTTGAAGAGTTTTGGG+GGG | - | chr6.1:58616623-58616642 | MS.gene046869:intron | 35.0% |
| !!! | TGCTGTGTCTATTTTTGAAG+AGG | - | chr6.1:58615868-58615887 | MS.gene046869:intron | 35.0% |
| AAAAAGACGTGCAGTGTCTA+CGG | + | chr6.1:58617561-58617580 | None:intergenic | 40.0% | |
| AAAGGAATGTGGATCAGTTG+AGG | + | chr6.1:58616154-58616173 | None:intergenic | 40.0% | |
| ACAAAATCACCAACGGATAG+TGG | + | chr6.1:58616305-58616324 | None:intergenic | 40.0% | |
| ACTTTGTACGAGTGATACGT+CGG | + | chr6.1:58615802-58615821 | None:intergenic | 40.0% | |
| AGTAAAGGTCATGCTAGTGA+AGG | - | chr6.1:58615452-58615471 | MS.gene046869:CDS | 40.0% | |
| AGTATGTATGCAACAAGCAG+GGG | - | chr6.1:58615729-58615748 | MS.gene046869:CDS | 40.0% | |
| AGTGAAGGTGATGAAAGTGA+AGG | - | chr6.1:58615392-58615411 | MS.gene046869:CDS | 40.0% | |
| AGTGAATGCGATGAAAGTCA+AGG | - | chr6.1:58615272-58615291 | MS.gene046869:CDS | 40.0% | |
| CAAAGGGAGGAAAATCAAAG+AGG | - | chr6.1:58617627-58617646 | MS.gene046869:CDS | 40.0% | |
| CAGGAAATTTGAATCTCGAG+GGG | - | chr6.1:58617139-58617158 | MS.gene046869:intron | 40.0% | |
| CAGTATGTATGCAACAAGCA+GGG | - | chr6.1:58615728-58615747 | MS.gene046869:CDS | 40.0% | |
| CCAAAAGCAGTTGTAACAGA+TGG | - | chr6.1:58616444-58616463 | MS.gene046869:CDS | 40.0% | |
| CCAGTAACAATTGGAACTTC+AGG | + | chr6.1:58617438-58617457 | None:intergenic | 40.0% | |
| CCTGAAGTTCCAATTGTTAC+TGG | - | chr6.1:58617435-58617454 | MS.gene046869:CDS | 40.0% | |
| GAAACATACCCGATCATTGT+TGG | - | chr6.1:58615050-58615069 | MS.gene046869:CDS | 40.0% | |
| GAACAAATACCACTATCCGT+TGG | - | chr6.1:58616293-58616312 | MS.gene046869:CDS | 40.0% | |
| GATGAAAGTCAAGGTGATGA+AGG | - | chr6.1:58615281-58615300 | MS.gene046869:CDS | 40.0% | |
| GATGAGCGATATGATGAAAC+TGG | - | chr6.1:58615179-58615198 | MS.gene046869:CDS | 40.0% | |
| GCAGGAAATTTGAATCTCGA+GGG | - | chr6.1:58617138-58617157 | MS.gene046869:intron | 40.0% | |
| GCATCTGAACAAGAATGCTA+TGG | - | chr6.1:58616533-58616552 | MS.gene046869:intron | 40.0% | |
| GGAGACAATGAAAGTGATGA+TGG | - | chr6.1:58615200-58615219 | MS.gene046869:CDS | 40.0% | |
| GGATGACATACAAAAGCTTC+GGG | - | chr6.1:58617398-58617417 | MS.gene046869:CDS | 40.0% | |
| GGTGAAGGTGATAAAAGTGA+AGG | - | chr6.1:58615317-58615336 | MS.gene046869:CDS | 40.0% | |
| GGTGATAAAGGTGAAGATGA+TGG | - | chr6.1:58615248-58615267 | MS.gene046869:CDS | 40.0% | |
| TAGTCAAAGCGAGGTTATCA+AGG | - | chr6.1:58618330-58618349 | MS.gene046869:CDS | 40.0% | |
| TGCAGGAAATTTGAATCTCG+AGG | - | chr6.1:58617137-58617156 | MS.gene046869:intron | 40.0% | |
| TGGCTAGAATACTGAGACAT+GGG | + | chr6.1:58617995-58618014 | None:intergenic | 40.0% | |
| TGTTCTGGTGATTATAGTGC+TGG | - | chr6.1:58615227-58615246 | MS.gene046869:CDS | 40.0% | |
| TTGATGGAGATTGCTCGATA+TGG | - | chr6.1:58617303-58617322 | MS.gene046869:intron | 40.0% | |
| TTTGTTGCGTTGGACGAAAA+AGG | - | chr6.1:58617230-58617249 | MS.gene046869:intron | 40.0% | |
| ! | AGCATACAAGCTACCCTTTT+TGG | + | chr6.1:58617370-58617389 | None:intergenic | 40.0% |
| ! | ATGCGTGCTGTTATTAAGGA+TGG | - | chr6.1:58616090-58616109 | MS.gene046869:CDS | 40.0% |
| ! | CAGCACAGGTCTTTTTCTTT+GGG | + | chr6.1:58618051-58618070 | None:intergenic | 40.0% |
| ! | CCATCTGTTACAACTGCTTT+TGG | + | chr6.1:58616447-58616466 | None:intergenic | 40.0% |
| ! | CTTGAATGTGGACTATTGTG+GGG | - | chr6.1:58617266-58617285 | MS.gene046869:intron | 40.0% |
| ! | GATGATGATGATGTGAGTCA+TGG | - | chr6.1:58615122-58615141 | MS.gene046869:CDS | 40.0% |
| ! | TAACCCATGGATTGTTCTCA+AGG | + | chr6.1:58616668-58616687 | None:intergenic | 40.0% |
| ! | TGATGATGTAGTTGTTGGTG+AGG | - | chr6.1:58615541-58615560 | MS.gene046869:CDS | 40.0% |
| ! | TGATTACGGTTTTACGGATG+TGG | - | chr6.1:58615016-58615035 | MS.gene046869:CDS | 40.0% |
| ! | TGTAGTTGTTGGTGAGGAAA+TGG | - | chr6.1:58615547-58615566 | MS.gene046869:CDS | 40.0% |
| ! | TTGTTGGTGAGGAAATGGTA+AGG | - | chr6.1:58615552-58615571 | MS.gene046869:CDS | 40.0% |
| !! | AGATGGTGATGGTTCTATGA+GGG | - | chr6.1:58616461-58616480 | MS.gene046869:CDS | 40.0% |
| !! | ATTTGGTGCTGCATTGATGA+TGG | - | chr6.1:58616356-58616375 | MS.gene046869:CDS | 40.0% |
| !! | GACAATGAAAGTGATGATGG+TGG | - | chr6.1:58615203-58615222 | MS.gene046869:CDS | 40.0% |
| !!! | TATCCGTTGGTGATTTTGTC+TGG | - | chr6.1:58616306-58616325 | MS.gene046869:CDS | 40.0% |
| AGAAAGATGCTCAGTGCTTG+CGG | + | chr6.1:58617663-58617682 | None:intergenic | 45.0% | |
| AGACGTGAGAGAAGGATCAA+AGG | - | chr6.1:58618018-58618037 | MS.gene046869:CDS | 45.0% | |
| AGTGAAGGTCATGCTAGTGA+AGG | - | chr6.1:58615422-58615441 | MS.gene046869:CDS | 45.0% | |
| AGTGAAGGTGATGAACGTGA+AGG | - | chr6.1:58615332-58615351 | MS.gene046869:CDS | 45.0% | |
| ATCCTTCTCTCACGTCTTTC+TGG | + | chr6.1:58618015-58618034 | None:intergenic | 45.0% | |
| CAAAGGGAGGCAAATCAAAG+AGG | - | chr6.1:58617831-58617850 | MS.gene046869:CDS | 45.0% | |
| CAACAATTCAGTGTTCGTGC+AGG | - | chr6.1:58617120-58617139 | MS.gene046869:intron | 45.0% | |
| CAGATGAGTTGTCAGCATAG+GGG | + | chr6.1:58616913-58616932 | None:intergenic | 45.0% | |
| CAGCCAGACAAAATCACCAA+CGG | + | chr6.1:58616312-58616331 | None:intergenic | 45.0% | |
| CATGCTAGCCAAAAAGACGT+GGG | - | chr6.1:58618106-58618125 | MS.gene046869:CDS | 45.0% | |
| CATGTTAGCCAGAAAGACGT+GGG | - | chr6.1:58617902-58617921 | MS.gene046869:CDS | 45.0% | |
| CGAGGCTGCTGAAATCTATA+CGG | - | chr6.1:58616947-58616966 | MS.gene046869:intron | 45.0% | |
| CTGGCTAGAATACTGAGACA+TGG | + | chr6.1:58617996-58618015 | None:intergenic | 45.0% | |
| GAATATTCTGCCACTGACGA+CGG | - | chr6.1:58616177-58616196 | MS.gene046869:intron | 45.0% | |
| GACGTGAGAGAAGGATCAAA+GGG | - | chr6.1:58618019-58618038 | MS.gene046869:CDS | 45.0% | |
| GATGAACGTGAAGGTGATGA+AGG | - | chr6.1:58615341-58615360 | MS.gene046869:CDS | 45.0% | |
| GATGAAGGTGAACGTGATGA+AGG | - | chr6.1:58615296-58615315 | MS.gene046869:CDS | 45.0% | |
| GCAGATGAGTTGTCAGCATA+GGG | + | chr6.1:58616914-58616933 | None:intergenic | 45.0% | |
| GCAGTATGTATGCAACAAGC+AGG | - | chr6.1:58615727-58615746 | MS.gene046869:CDS | 45.0% | |
| GCAGTTGTAACAGATGGTGA+TGG | - | chr6.1:58616450-58616469 | MS.gene046869:CDS | 45.0% | |
| GGTACACCGGAACATGATTA+CGG | - | chr6.1:58615002-58615021 | MS.gene046869:intron | 45.0% | |
| GGTGATGAAAGTGAAGGTCA+TGG | - | chr6.1:58615413-58615432 | MS.gene046869:CDS | 45.0% | |
| TACCTGCGTGACGATTTCTT+TGG | - | chr6.1:58616726-58616745 | MS.gene046869:intron | 45.0% | |
| TGGACGAAAAAGGCGAAGAT+TGG | - | chr6.1:58617240-58617259 | MS.gene046869:intron | 45.0% | |
| TGGCTAACATGCTGAGACAT+TGG | + | chr6.1:58617893-58617912 | None:intergenic | 45.0% | |
| TTCTATGAGGGAGGCGATAA+AGG | - | chr6.1:58616473-58616492 | MS.gene046869:intron | 45.0% | |
| TTCTTAGTGAACCCAACACG+TGG | + | chr6.1:58616052-58616071 | None:intergenic | 45.0% | |
| ! | AGTGAAGGTCATGGTAGTGA+AGG | - | chr6.1:58615497-58615516 | MS.gene046869:CDS | 45.0% |
| ! | ATGGCCTTGAGAACAATCCA+TGG | - | chr6.1:58616661-58616680 | MS.gene046869:intron | 45.0% |
| ! | CATTGGTTGGAGTTGGTTCA+TGG | + | chr6.1:58615901-58615920 | None:intergenic | 45.0% |
| ! | GCAGCACAGGTCTTTTTCTT+TGG | + | chr6.1:58618052-58618071 | None:intergenic | 45.0% |
| ! | TAGCTTGTATGCTGATGTGC+TGG | - | chr6.1:58617377-58617396 | MS.gene046869:CDS | 45.0% |
| ! | TGCACAACATTGGTTGGAGT+TGG | + | chr6.1:58615908-58615927 | None:intergenic | 45.0% |
| ! | TGGCCTTGAGAACAATCCAT+GGG | - | chr6.1:58616662-58616681 | MS.gene046869:intron | 45.0% |
| !! | AGTGATGATGGTGGTTGTTC+TGG | - | chr6.1:58615212-58615231 | MS.gene046869:CDS | 45.0% |
| !! | CAGATGGTGATGGTTCTATG+AGG | - | chr6.1:58616460-58616479 | MS.gene046869:CDS | 45.0% |
| !! | TGCAGGGAAGTGTCCAAAAA+GGG | - | chr6.1:58617354-58617373 | MS.gene046869:CDS | 45.0% |
| !! | TTGCAGGGAAGTGTCCAAAA+AGG | - | chr6.1:58617353-58617372 | MS.gene046869:CDS | 45.0% |
| AAAGGGAGGTAGTCAAAGCG+AGG | - | chr6.1:58618321-58618340 | MS.gene046869:CDS | 50.0% | |
| AAGGGTGGATATCCACGTGT+TGG | - | chr6.1:58616037-58616056 | MS.gene046869:CDS | 50.0% | |
| AGACGTGGCAGGAGGATTAA+AGG | - | chr6.1:58618303-58618322 | MS.gene046869:CDS | 50.0% | |
| AGACGTGGGAGAAGGATCAA+AGG | - | chr6.1:58617610-58617629 | MS.gene046869:CDS | 50.0% | |
| AGCCAGAAAGACGTGAGAGA+AGG | - | chr6.1:58618010-58618029 | MS.gene046869:CDS | 50.0% | |
| AGGGTGGATATCCACGTGTT+GGG | - | chr6.1:58616038-58616057 | MS.gene046869:CDS | 50.0% | |
| ATCCTTCTCCCACGTCTCTT+TGG | + | chr6.1:58617607-58617626 | None:intergenic | 50.0% | |
| ATCCTTCTCCCACGTCTTTC+TGG | + | chr6.1:58617709-58617728 | None:intergenic | 50.0% | |
| CACCAAAGAAATCGTCACGC+AGG | + | chr6.1:58616731-58616750 | None:intergenic | 50.0% | |
| CACCACTCCCAACAATGATC+GGG | + | chr6.1:58615061-58615080 | None:intergenic | 50.0% | |
| CAGCATAGGGGATGAAAACC+TGG | + | chr6.1:58616901-58616920 | None:intergenic | 50.0% | |
| CATAGACGATGACGCGTACT+TGG | + | chr6.1:58616507-58616526 | None:intergenic | 50.0% | |
| CATGCTAGCCAGAAAGACGT+GGG | - | chr6.1:58617800-58617819 | MS.gene046869:CDS | 50.0% | |
| CCACCACTCCCAACAATGAT+CGG | + | chr6.1:58615062-58615081 | None:intergenic | 50.0% | |
| CCATTGCCAGTGAAGTGCAA+AGG | - | chr6.1:58617486-58617505 | MS.gene046869:CDS | 50.0% | |
| CCTGATAGCCAGAAAGACGT+GGG | - | chr6.1:58617698-58617717 | MS.gene046869:CDS | 50.0% | |
| CCTTTGCACTTCACTGGCAA+TGG | + | chr6.1:58617489-58617508 | None:intergenic | 50.0% | |
| CGCAGATGAGTTGTCAGCAT+AGG | + | chr6.1:58616915-58616934 | None:intergenic | 50.0% | |
| CTGCGTGACGATTTCTTTGG+TGG | - | chr6.1:58616729-58616748 | MS.gene046869:intron | 50.0% | |
| GACGTGGCAGGAGGATTAAA+GGG | - | chr6.1:58618304-58618323 | MS.gene046869:CDS | 50.0% | |
| GACGTGGGAGAAGGATCAAA+GGG | - | chr6.1:58617611-58617630 | MS.gene046869:CDS | 50.0% | |
| GAGTGCTAGCCAAAAAGACG+TGG | - | chr6.1:58618288-58618307 | MS.gene046869:CDS | 50.0% | |
| GATGAAGGTGAACGTGATGG+AGG | - | chr6.1:58615356-58615375 | MS.gene046869:CDS | 50.0% | |
| GCATGCTAGCCAAAAAGACG+TGG | - | chr6.1:58618105-58618124 | MS.gene046869:CDS | 50.0% | |
| GCATGTTAGCCAGAAAGACG+TGG | - | chr6.1:58617901-58617920 | MS.gene046869:CDS | 50.0% | |
| GGATACATGGTGGCTCAGAA+GGG | - | chr6.1:58616019-58616038 | MS.gene046869:CDS | 50.0% | |
| GGTGAACGTGATGAAGGTGA+AGG | - | chr6.1:58615302-58615321 | MS.gene046869:CDS | 50.0% | |
| GGTGATGAAGGTGAACGTGA+TGG | - | chr6.1:58615293-58615312 | MS.gene046869:CDS | 50.0% | |
| GGTGGAGGTGATGAAAGTGA+AGG | - | chr6.1:58615377-58615396 | MS.gene046869:CDS | 50.0% | |
| GTGAGAGAAGGATCAAAGGG+AGG | - | chr6.1:58618022-58618041 | MS.gene046869:CDS | 50.0% | |
| TACCCGATCATTGTTGGGAG+TGG | - | chr6.1:58615056-58615075 | MS.gene046869:CDS | 50.0% | |
| TATGAGGGAGGCGATAAAGG+CGG | - | chr6.1:58616476-58616495 | MS.gene046869:intron | 50.0% | |
| TCCCACGTCTCTTTGGCTAT+CGG | + | chr6.1:58617600-58617619 | None:intergenic | 50.0% | |
| TGGCTAGCATGCTGAGACAT+AGG | + | chr6.1:58617791-58617810 | None:intergenic | 50.0% | |
| TGGCTAGCATGCTGAGACAT+GGG | + | chr6.1:58617791-58617810 | None:intergenic | 50.0% | |
| TGGCTAGCATGCTGAGACAT+TGG | + | chr6.1:58617791-58617810 | None:intergenic | 50.0% | |
| TGGCTATCAGGCTGAGACAT+GGG | + | chr6.1:58617689-58617708 | None:intergenic | 50.0% | |
| TTTCAAACGTCCGTCGTCAG+TGG | + | chr6.1:58616190-58616209 | None:intergenic | 50.0% | |
| ! | AGGTGTTGCACTGAGTGTGA+AGG | - | chr6.1:58617007-58617026 | MS.gene046869:intron | 50.0% |
| ! | ATCCTCCTCCCACGTCTTTT+TGG | + | chr6.1:58618117-58618136 | None:intergenic | 50.0% |
| ! | ATCCTCCTGCCACGTCTTTT+TGG | + | chr6.1:58618300-58618319 | None:intergenic | 50.0% |
| ! | ATGTTGACTGCTTGCAGCAC+AGG | + | chr6.1:58618065-58618084 | None:intergenic | 50.0% |
| ! | CTCGTACAAAGTGTCCAGCT+AGG | - | chr6.1:58615810-58615829 | MS.gene046869:intron | 50.0% |
| !! | TGGCTAGCACTCTGAGACAT+AGG | + | chr6.1:58618280-58618299 | None:intergenic | 50.0% |
| !! | TGGTGATGGTTCTATGAGGG+AGG | - | chr6.1:58616464-58616483 | MS.gene046869:CDS | 50.0% |
| !!! | TGAAGAGTTTTGGGGGGACT+TGG | - | chr6.1:58616629-58616648 | MS.gene046869:intron | 50.0% |
| AGACGTGGGAGGAGGATCAA+AGG | - | chr6.1:58618120-58618139 | MS.gene046869:CDS | 55.0% | |
| AGCCAAAAAGACGTGGCAGG+AGG | - | chr6.1:58618295-58618314 | MS.gene046869:CDS | 55.0% | |
| AGCCAAAAAGACGTGGGAGG+AGG | - | chr6.1:58618112-58618131 | MS.gene046869:CDS | 55.0% | |
| AGCCAAAGAGACGTGGGAGA+AGG | - | chr6.1:58617602-58617621 | MS.gene046869:CDS | 55.0% | |
| AGCCAGAAAGACGTGGGAGA+AGG | - | chr6.1:58617704-58617723 | MS.gene046869:CDS | 55.0% | |
| ATCCTCCTCCCACGTCTTTC+TGG | + | chr6.1:58618219-58618238 | None:intergenic | 55.0% | |
| CCCACGTCTCTTTGGCTATC+GGG | + | chr6.1:58617599-58617618 | None:intergenic | 55.0% | |
| CCCGATAGCCAAAGAGACGT+GGG | - | chr6.1:58617596-58617615 | MS.gene046869:CDS | 55.0% | |
| CCGATCATTGTTGGGAGTGG+TGG | - | chr6.1:58615059-58615078 | MS.gene046869:CDS | 55.0% | |
| CGCGTCATCGTCTATGTGCT+TGG | - | chr6.1:58616511-58616530 | MS.gene046869:intron | 55.0% | |
| CTGGCTAGCATGCTGAGACA+TGG | + | chr6.1:58617792-58617811 | None:intergenic | 55.0% | |
| CTGGCTATCAGGCTGAGACA+TGG | + | chr6.1:58617690-58617709 | None:intergenic | 55.0% | |
| GACGTGGGAGGAGGATCAAA+GGG | - | chr6.1:58618121-58618140 | MS.gene046869:CDS | 55.0% | |
| GCATGCTAGCCAGAAAGACG+TGG | - | chr6.1:58617799-58617818 | MS.gene046869:CDS | 55.0% | |
| GCCTGATAGCCAGAAAGACG+TGG | - | chr6.1:58617697-58617716 | MS.gene046869:CDS | 55.0% | |
| GCTAGCCAAAAAGACGTGGC+AGG | - | chr6.1:58618292-58618311 | MS.gene046869:CDS | 55.0% | |
| GCTAGCCAAAAAGACGTGGG+AGG | - | chr6.1:58618109-58618128 | MS.gene046869:CDS | 55.0% | |
| GGGATACATGGTGGCTCAGA+AGG | - | chr6.1:58616018-58616037 | MS.gene046869:CDS | 55.0% | |
| GTGGCAGGAGGATTAAAGGG+AGG | - | chr6.1:58618307-58618326 | MS.gene046869:CDS | 55.0% | |
| GTGGGAGAAGGATCAAAGGG+AGG | - | chr6.1:58617614-58617633 | MS.gene046869:CDS | 55.0% | |
| TACATGGTGGCTCAGAAGGG+TGG | - | chr6.1:58616022-58616041 | MS.gene046869:CDS | 55.0% | |
| TAGTGAACACGGAGCCTAGC+TGG | + | chr6.1:58615827-58615846 | None:intergenic | 55.0% | |
| TCTGCGATGTCTTGAACGCG+AGG | - | chr6.1:58616929-58616948 | MS.gene046869:intron | 55.0% | |
| TGGCTATCGGGCTGAGACAT+GGG | + | chr6.1:58617587-58617606 | None:intergenic | 55.0% | |
| TTGGCTATCGGGCTGAGACA+TGG | + | chr6.1:58617588-58617607 | None:intergenic | 55.0% | |
| ! | GAAGGTGAACGTGATGGAGG+TGG | - | chr6.1:58615359-58615378 | MS.gene046869:CDS | 55.0% |
| ! | GGAGCACCTTTGCACTTCAC+TGG | + | chr6.1:58617495-58617514 | None:intergenic | 55.0% |
| !! | CCCACGTCTTTCTGGCTATC+AGG | + | chr6.1:58617701-58617720 | None:intergenic | 55.0% |
| !! | GGGGACTTGGTGAGGGAAAA+TGG | - | chr6.1:58616642-58616661 | MS.gene046869:intron | 55.0% |
| !!! | AGTTTTGGGGGGACTTGGTG+AGG | - | chr6.1:58616634-58616653 | MS.gene046869:intron | 55.0% |
| !!! | GTTTTGGGGGGACTTGGTGA+GGG | - | chr6.1:58616635-58616654 | MS.gene046869:intron | 55.0% |
| AGCCAGAAAGACGTGGGAGG+AGG | - | chr6.1:58618214-58618233 | MS.gene046869:CDS | 60.0% | |
| GCCCGATAGCCAAAGAGACG+TGG | - | chr6.1:58617595-58617614 | MS.gene046869:CDS | 60.0% | |
| GCTAGCCAGAAAGACGTGGG+AGG | - | chr6.1:58617803-58617822 | MS.gene046869:CDS | 60.0% | |
| GTGGGAGGAGGATCAAAGGG+AGG | - | chr6.1:58618124-58618143 | MS.gene046869:CDS | 60.0% | |
| ! | GGTGAACGTGATGGAGGTGG+AGG | - | chr6.1:58615362-58615381 | MS.gene046869:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 58614969 | 58618419 | 58614969 | ID=MS.gene046869 |
| chr6.1 | mRNA | 58614969 | 58618419 | 58614969 | ID=MS.gene046869.t1;Parent=MS.gene046869 |
| chr6.1 | exon | 58617311 | 58618419 | 58617311 | ID=MS.gene046869.t1.exon1;Parent=MS.gene046869.t1 |
| chr6.1 | CDS | 58617311 | 58618419 | 58617311 | ID=cds.MS.gene046869.t1;Parent=MS.gene046869.t1 |
| chr6.1 | exon | 58616228 | 58616486 | 58616228 | ID=MS.gene046869.t1.exon2;Parent=MS.gene046869.t1 |
| chr6.1 | CDS | 58616228 | 58616486 | 58616228 | ID=cds.MS.gene046869.t1;Parent=MS.gene046869.t1 |
| chr6.1 | exon | 58615960 | 58616136 | 58615960 | ID=MS.gene046869.t1.exon3;Parent=MS.gene046869.t1 |
| chr6.1 | CDS | 58615960 | 58616136 | 58615960 | ID=cds.MS.gene046869.t1;Parent=MS.gene046869.t1 |
| chr6.1 | exon | 58615010 | 58615792 | 58615010 | ID=MS.gene046869.t1.exon4;Parent=MS.gene046869.t1 |
| chr6.1 | CDS | 58615010 | 58615792 | 58615010 | ID=cds.MS.gene046869.t1;Parent=MS.gene046869.t1 |
| chr6.1 | exon | 58614969 | 58614980 | 58614969 | ID=MS.gene046869.t1.exon5;Parent=MS.gene046869.t1 |
| chr6.1 | CDS | 58614969 | 58614980 | 58614969 | ID=cds.MS.gene046869.t1;Parent=MS.gene046869.t1 |
| Gene Sequence |
| Protein sequence |
