Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene047243.t1 | ABE91851.1 | 98.6 | 626 | 9 | 0 | 1 | 626 | 66 | 691 | 0.00E+00 | 1272.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene047243.t1 | Q9SY66 | 79.9 | 622 | 125 | 0 | 1 | 622 | 53 | 674 | 4.4e-309 | 1061.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene047243.t1 | Q1SKU8 | 98.6 | 626 | 9 | 0 | 1 | 626 | 66 | 691 | 0.0e+00 | 1272.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene047243.t1 | TF | FAR1 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene047243.t1 | MTR_4g035820 | 42.517 | 294 | 158 | 5 | 1 | 291 | 80 | 365 | 1.63e-64 | 224 |
MS.gene047243.t1 | MTR_4g035820 | 45.361 | 97 | 53 | 0 | 378 | 474 | 325 | 421 | 2.45e-20 | 95.9 |
MS.gene047243.t1 | MTR_3g450850 | 42.373 | 236 | 129 | 2 | 1 | 230 | 52 | 286 | 1.42e-61 | 208 |
MS.gene047243.t1 | MTR_3g012160 | 49.462 | 93 | 47 | 0 | 139 | 231 | 1 | 93 | 1.98e-28 | 109 |
MS.gene047243.t1 | MTR_6g051425 | 28.782 | 271 | 186 | 4 | 4 | 271 | 25 | 291 | 8.97e-28 | 115 |
MS.gene047243.t1 | MTR_6g014355 | 39.344 | 122 | 72 | 1 | 63 | 182 | 5 | 126 | 2.47e-21 | 94.0 |
MS.gene047243.t1 | MTR_1g070355 | 27.778 | 234 | 158 | 7 | 2 | 232 | 80 | 305 | 6.54e-20 | 94.0 |
MS.gene047243.t1 | MTR_6g022080 | 33.333 | 129 | 79 | 4 | 7 | 133 | 96 | 219 | 1.29e-14 | 74.3 |
MS.gene047243.t1 | MTR_0402s0040 | 32.353 | 170 | 105 | 6 | 2 | 169 | 32 | 193 | 1.34e-13 | 73.9 |
MS.gene047243.t1 | MTR_7g446520 | 24.231 | 260 | 174 | 4 | 2 | 260 | 94 | 331 | 1.18e-12 | 70.1 |
MS.gene047243.t1 | MTR_5g076070 | 24.255 | 235 | 161 | 8 | 2 | 230 | 59 | 282 | 5.80e-12 | 67.0 |
MS.gene047243.t1 | MTR_0853s0010 | 29.710 | 138 | 81 | 4 | 2 | 133 | 31 | 158 | 4.54e-11 | 62.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene047243.t1 | AT1G10240 | 79.904 | 622 | 125 | 0 | 1 | 622 | 53 | 674 | 0.0 | 1091 |
MS.gene047243.t1 | AT1G10240 | 79.904 | 622 | 125 | 0 | 1 | 622 | 53 | 674 | 0.0 | 1091 |
MS.gene047243.t1 | AT5G28530 | 42.097 | 620 | 342 | 6 | 1 | 608 | 60 | 674 | 7.85e-172 | 505 |
MS.gene047243.t1 | AT5G28530 | 42.097 | 620 | 338 | 6 | 1 | 608 | 60 | 670 | 1.87e-171 | 504 |
MS.gene047243.t1 | AT5G28530 | 42.097 | 620 | 338 | 6 | 1 | 608 | 60 | 670 | 1.87e-171 | 504 |
MS.gene047243.t1 | AT5G28530 | 38.361 | 610 | 316 | 8 | 1 | 608 | 60 | 611 | 1.31e-136 | 413 |
MS.gene047243.t1 | AT5G28530 | 38.361 | 610 | 312 | 8 | 1 | 608 | 60 | 607 | 1.52e-136 | 412 |
MS.gene047243.t1 | AT4G38180 | 30.732 | 615 | 397 | 13 | 2 | 597 | 79 | 683 | 1.09e-80 | 271 |
MS.gene047243.t1 | AT4G15090 | 29.479 | 614 | 396 | 14 | 2 | 596 | 57 | 652 | 7.63e-76 | 259 |
MS.gene047243.t1 | AT4G15090 | 29.479 | 614 | 396 | 14 | 2 | 596 | 57 | 652 | 7.63e-76 | 259 |
MS.gene047243.t1 | AT4G15090 | 29.479 | 614 | 396 | 14 | 2 | 596 | 57 | 652 | 7.63e-76 | 259 |
MS.gene047243.t1 | AT4G15090 | 29.479 | 614 | 396 | 14 | 2 | 596 | 57 | 652 | 7.63e-76 | 259 |
MS.gene047243.t1 | AT4G15090 | 29.479 | 614 | 396 | 14 | 2 | 596 | 57 | 652 | 7.63e-76 | 259 |
MS.gene047243.t1 | AT1G76320 | 26.471 | 612 | 406 | 14 | 2 | 596 | 3 | 587 | 1.25e-61 | 217 |
MS.gene047243.t1 | AT1G76320 | 26.471 | 612 | 406 | 14 | 2 | 596 | 3 | 587 | 5.04e-61 | 216 |
MS.gene047243.t1 | AT1G76320 | 26.471 | 612 | 406 | 14 | 2 | 596 | 3 | 587 | 5.04e-61 | 216 |
MS.gene047243.t1 | AT1G76320 | 26.471 | 612 | 406 | 14 | 2 | 596 | 3 | 587 | 5.10e-61 | 216 |
MS.gene047243.t1 | AT3G22170 | 24.958 | 589 | 355 | 17 | 2 | 552 | 76 | 615 | 3.08e-55 | 201 |
MS.gene047243.t1 | AT3G22170 | 24.958 | 589 | 355 | 17 | 2 | 552 | 76 | 615 | 3.08e-55 | 201 |
MS.gene047243.t1 | AT2G27110 | 25.884 | 622 | 401 | 17 | 2 | 609 | 55 | 630 | 2.82e-52 | 193 |
MS.gene047243.t1 | AT2G27110 | 25.884 | 622 | 401 | 17 | 2 | 609 | 55 | 630 | 2.82e-52 | 193 |
MS.gene047243.t1 | AT3G06250 | 26.620 | 571 | 334 | 16 | 2 | 552 | 196 | 701 | 2.80e-50 | 186 |
MS.gene047243.t1 | AT3G06250 | 26.620 | 571 | 334 | 16 | 2 | 552 | 196 | 701 | 2.80e-50 | 186 |
MS.gene047243.t1 | AT3G06250 | 26.620 | 571 | 334 | 16 | 2 | 552 | 196 | 701 | 2.80e-50 | 186 |
MS.gene047243.t1 | AT1G52520 | 26.289 | 582 | 361 | 18 | 2 | 552 | 91 | 635 | 8.53e-49 | 181 |
MS.gene047243.t1 | AT5G18960 | 26.795 | 571 | 336 | 18 | 2 | 552 | 217 | 725 | 1.72e-48 | 182 |
MS.gene047243.t1 | AT5G18960 | 26.795 | 571 | 336 | 18 | 2 | 552 | 217 | 725 | 1.72e-48 | 182 |
MS.gene047243.t1 | AT4G19990 | 25.920 | 598 | 357 | 15 | 2 | 567 | 27 | 570 | 1.76e-47 | 178 |
MS.gene047243.t1 | AT4G19990 | 25.920 | 598 | 357 | 15 | 2 | 567 | 27 | 570 | 1.94e-47 | 178 |
MS.gene047243.t1 | AT4G19990 | 25.920 | 598 | 357 | 15 | 2 | 567 | 27 | 570 | 1.94e-47 | 178 |
MS.gene047243.t1 | AT4G19990 | 25.920 | 598 | 357 | 15 | 2 | 567 | 41 | 584 | 2.34e-47 | 178 |
MS.gene047243.t1 | AT4G19990 | 25.920 | 598 | 357 | 15 | 2 | 567 | 27 | 570 | 4.49e-47 | 177 |
MS.gene047243.t1 | AT4G19990 | 25.920 | 598 | 357 | 15 | 2 | 567 | 27 | 570 | 4.49e-47 | 177 |
MS.gene047243.t1 | AT2G27110 | 27.802 | 464 | 295 | 11 | 158 | 609 | 50 | 485 | 6.04e-47 | 176 |
MS.gene047243.t1 | AT1G80010 | 26.792 | 586 | 366 | 17 | 2 | 552 | 101 | 658 | 3.17e-45 | 171 |
MS.gene047243.t1 | AT4G19990 | 25.906 | 552 | 334 | 13 | 43 | 567 | 10 | 513 | 7.38e-43 | 164 |
MS.gene047243.t1 | AT4G38170 | 27.493 | 371 | 257 | 5 | 189 | 552 | 31 | 396 | 7.72e-43 | 162 |
MS.gene047243.t1 | AT2G32250 | 21.583 | 556 | 382 | 11 | 2 | 552 | 44 | 550 | 2.20e-42 | 164 |
MS.gene047243.t1 | AT2G32250 | 22.380 | 563 | 369 | 13 | 2 | 552 | 3 | 509 | 3.01e-42 | 163 |
MS.gene047243.t1 | AT2G32250 | 22.064 | 562 | 372 | 12 | 2 | 552 | 3 | 509 | 3.12e-42 | 163 |
MS.gene047243.t1 | AT2G32250 | 21.747 | 561 | 375 | 12 | 2 | 552 | 44 | 550 | 4.09e-42 | 163 |
MS.gene047243.t1 | AT2G32250 | 21.747 | 561 | 375 | 12 | 2 | 552 | 44 | 550 | 4.09e-42 | 163 |
MS.gene047243.t1 | AT2G32250 | 21.747 | 561 | 375 | 12 | 2 | 552 | 44 | 550 | 4.09e-42 | 163 |
MS.gene047243.t1 | AT2G32250 | 22.535 | 568 | 362 | 14 | 2 | 552 | 44 | 550 | 4.45e-42 | 163 |
MS.gene047243.t1 | AT2G32250 | 22.535 | 568 | 362 | 14 | 2 | 552 | 44 | 550 | 4.45e-42 | 163 |
Find 128 sgRNAs with CRISPR-Local
Find 193 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTATTGATTAACAACCTTTA+TGG | 0.138871 | 2.2:-73966217 | None:intergenic |
AGGGAGATGGTCTGTTCTTT+TGG | 0.145904 | 2.2:+73967019 | MS.gene047243:CDS |
ATAAGCAAAACCACTGAATT+TGG | 0.147239 | 2.2:+73965634 | MS.gene047243:CDS |
CCTTCTTGGTAGGCTTTCTT+AGG | 0.189142 | 2.2:+73966764 | MS.gene047243:intron |
TTAGAGATGAAACCATATTT+TGG | 0.193583 | 2.2:-73967926 | None:intergenic |
GTGTACTCAAATTTAAAATT+AGG | 0.227389 | 2.2:-73965973 | None:intergenic |
TCTTGGTTCAATGCTGTTCT+AGG | 0.230975 | 2.2:+73966917 | MS.gene047243:CDS |
CCACCATAATCATGAACTTT+TGG | 0.234641 | 2.2:+73965690 | MS.gene047243:CDS |
GTTCCAAAAGTTCATGATTA+TGG | 0.235757 | 2.2:-73965693 | None:intergenic |
TATGGAATGCCCTGCTTCTT+TGG | 0.236061 | 2.2:+73966150 | MS.gene047243:CDS |
AGTTAAGCTATTCCAAAATA+TGG | 0.247042 | 2.2:+73967914 | MS.gene047243:CDS |
TTGACATGCCGCTGGGGATA+TGG | 0.254174 | 2.2:+73966112 | MS.gene047243:CDS |
CTTAGTTTGGGTTGATGATT+TGG | 0.272442 | 2.2:-73965560 | None:intergenic |
CTGGCACATTGTAATGAAAT+TGG | 0.282052 | 2.2:-73968032 | None:intergenic |
ATCCTTATGTTTGCCAAAAC+AGG | 0.285583 | 2.2:+73965775 | MS.gene047243:CDS |
ATGAACAGAAATCCCTGTTT+TGG | 0.290771 | 2.2:-73965788 | None:intergenic |
AAATCTAGGGTTTCTTCTTC+TGG | 0.296205 | 2.2:-73965916 | None:intergenic |
TATTTCGTTGAGGCTTAGTT+TGG | 0.297452 | 2.2:-73965573 | None:intergenic |
TGCACATTCTTAACAAATCT+AGG | 0.298629 | 2.2:-73965930 | None:intergenic |
TGGATTGGGATAAATAATTA+TGG | 0.299952 | 2.2:+73966132 | MS.gene047243:CDS |
AAGAATGTGCAGAAATATTA+AGG | 0.303262 | 2.2:+73965942 | MS.gene047243:CDS |
AAACCAGTGACGCGCCATTC+TGG | 0.316021 | 2.2:-73965661 | None:intergenic |
TTGGAATAGCTTAACTCTTT+CGG | 0.327991 | 2.2:-73967907 | None:intergenic |
TAGTCATTCCCGCAAGAAAA+TGG | 0.334474 | 2.2:-73967114 | None:intergenic |
TAGCACACAGCCAAAGAAGC+AGG | 0.342849 | 2.2:-73966160 | None:intergenic |
TCATCAAATGATGAGACTTA+TGG | 0.350578 | 2.2:+73965807 | MS.gene047243:CDS |
AAGGAGGTCGCAGAGTTTAC+TGG | 0.359371 | 2.2:+73967694 | MS.gene047243:CDS |
CAAAACATGCTTTCTGCATA+TGG | 0.375824 | 2.2:+73966873 | MS.gene047243:CDS |
ATATAGCTCGCGCTCACTTT+GGG | 0.386287 | 2.2:+73967072 | MS.gene047243:CDS |
AGAAAATGGCTTCTTAGATA+TGG | 0.389745 | 2.2:-73967100 | None:intergenic |
GGAAGGAATCGAACTTGGTT+TGG | 0.392049 | 2.2:-73965715 | None:intergenic |
TATATAGCTCGCGCTCACTT+TGG | 0.393538 | 2.2:+73967071 | MS.gene047243:CDS |
CGTAGCAGCGTGCGATTCCA+TGG | 0.396995 | 2.2:-73967559 | None:intergenic |
ATCTTCCAGATGTGGTTGTC+AGG | 0.399237 | 2.2:+73965600 | MS.gene047243:CDS |
GCTTGCTCACTTTGTTGAAC+AGG | 0.402511 | 2.2:+73967198 | MS.gene047243:CDS |
CTTGCGGGAATGACTACAAC+TGG | 0.403842 | 2.2:+73967121 | MS.gene047243:CDS |
CACCGAAGATATCATACAAT+TGG | 0.404756 | 2.2:-73966050 | None:intergenic |
GTCTAAAGAACGATTAGATA+TGG | 0.411264 | 2.2:+73967965 | MS.gene047243:CDS |
TAAGCAAAACCACTGAATTT+GGG | 0.413718 | 2.2:+73965635 | MS.gene047243:CDS |
AATAGAGAAGCCGCAGGTCT+TGG | 0.423335 | 2.2:-73965449 | None:intergenic |
CCTCCAGAATGGCGCGTCAC+TGG | 0.424652 | 2.2:+73965658 | MS.gene047243:CDS |
CACTGCATTTGACATGCCGC+TGG | 0.431194 | 2.2:+73966104 | MS.gene047243:CDS |
ATAAGCCTGACAACCACATC+TGG | 0.432847 | 2.2:-73965605 | None:intergenic |
CTTGAGAAGTGCGTCGAACC+TGG | 0.435619 | 2.2:+73965832 | MS.gene047243:CDS |
CCAGAGATACTTCTACCATT+AGG | 0.440893 | 2.2:+73968051 | MS.gene047243:CDS |
TCTCTGAGAGTTCTTTCAAC+AGG | 0.443737 | 2.2:+73967786 | MS.gene047243:CDS |
CCTAATGGTAGAAGTATCTC+TGG | 0.445108 | 2.2:-73968051 | None:intergenic |
TGCCGCTGGGGATATGGATT+GGG | 0.446980 | 2.2:+73966118 | MS.gene047243:CDS |
ATTTCGTTGAGGCTTAGTTT+GGG | 0.449059 | 2.2:-73965572 | None:intergenic |
CGGATGGGAAGATATGCATC+TGG | 0.452008 | 2.2:-73967825 | None:intergenic |
CAAAATGTTAGCCTCAAAAC+AGG | 0.452685 | 2.2:+73967531 | MS.gene047243:CDS |
TAGGTGAACGCTACAATGAC+TGG | 0.457850 | 2.2:+73966936 | MS.gene047243:CDS |
GTTTGGGTTGATGATTTGGC+AGG | 0.459466 | 2.2:-73965556 | None:intergenic |
TAAACGGTTGTTTGCATCAA+GGG | 0.461284 | 2.2:-73965995 | None:intergenic |
TACTTTGTTTGTCACCGTGC+TGG | 0.469337 | 2.2:+73965526 | MS.gene047243:CDS |
TAAATTAACAATGTGTCGAT+TGG | 0.471898 | 2.2:-73967050 | None:intergenic |
ATGCCGCTGGGGATATGGAT+TGG | 0.473702 | 2.2:+73966117 | MS.gene047243:CDS |
TCAGTAAAAGGCAAATATCC+AGG | 0.474275 | 2.2:-73965850 | None:intergenic |
ATCCAATTGTATGATATCTT+CGG | 0.477575 | 2.2:+73966048 | MS.gene047243:CDS |
CATGGAATCGCACGCTGCTA+CGG | 0.484767 | 2.2:+73967560 | MS.gene047243:CDS |
TTGACGACTTTGAACTAGGC+TGG | 0.486705 | 2.2:+73966996 | MS.gene047243:CDS |
TGAAGCTTCGAAAAGGCAAA+AGG | 0.488243 | 2.2:-73967591 | None:intergenic |
GCACATTCTTAACAAATCTA+GGG | 0.488962 | 2.2:-73965929 | None:intergenic |
AAATTCCAGAAAATTCAAAC+TGG | 0.489969 | 2.2:-73967752 | None:intergenic |
CAGTCATCATAGATTCCTAA+TGG | 0.491526 | 2.2:-73968066 | None:intergenic |
ACTCTTTCGGCATGATCGCT+AGG | 0.495476 | 2.2:-73967894 | None:intergenic |
CTGAATTTGGGCCTCCAGAA+TGG | 0.496915 | 2.2:+73965647 | MS.gene047243:CDS |
ATCTAATCGTTCTTTAGACT+TGG | 0.498595 | 2.2:-73967961 | None:intergenic |
TCAGTTGACGACTTTGAACT+AGG | 0.498779 | 2.2:+73966992 | MS.gene047243:CDS |
ACTGCATTTGACATGCCGCT+GGG | 0.500632 | 2.2:+73966105 | MS.gene047243:CDS |
ATGCAGGAAGGAATCGAACT+TGG | 0.504851 | 2.2:-73965720 | None:intergenic |
ATTAACAACCTTTATGGCCC+AGG | 0.508147 | 2.2:-73966211 | None:intergenic |
GCTTCAAGAACAACTTGTGT+TGG | 0.510259 | 2.2:+73967608 | MS.gene047243:CDS |
TTGTTCTTGAAGCTTCGAAA+AGG | 0.515435 | 2.2:-73967598 | None:intergenic |
TAGTAGCAAAGTTTCCGTCT+TGG | 0.523045 | 2.2:+73966900 | MS.gene047243:CDS |
ACCGTTTAGAAAATATTGCC+TGG | 0.526747 | 2.2:+73966010 | MS.gene047243:CDS |
GTAGCAGCGTGCGATTCCAT+GGG | 0.533610 | 2.2:-73967558 | None:intergenic |
CAATTAACGCCTTCATTCAA+CGG | 0.534336 | 2.2:+73967155 | MS.gene047243:CDS |
CTAAACGGTTGTTTGCATCA+AGG | 0.535769 | 2.2:-73965996 | None:intergenic |
ACTGATACGACGCCATCGGA+TGG | 0.541479 | 2.2:-73967841 | None:intergenic |
CTGATACGACGCCATCGGAT+GGG | 0.543366 | 2.2:-73967840 | None:intergenic |
TCTGATATAGTTCTGTATGC+AGG | 0.547078 | 2.2:-73965736 | None:intergenic |
TACTGCAAGATGAAACTGTC+CGG | 0.547112 | 2.2:+73966181 | MS.gene047243:CDS |
TGATCAGTTAATATAGTCTG+TGG | 0.550040 | 2.2:-73966806 | None:intergenic |
TCCTTATGTTTGCCAAAACA+GGG | 0.551056 | 2.2:+73965776 | MS.gene047243:CDS |
GAGACAGAAGAATGGAAACT+TGG | 0.557670 | 2.2:-73967995 | None:intergenic |
TGAACTAGGCTGGAGGGAGA+TGG | 0.559599 | 2.2:+73967006 | MS.gene047243:CDS |
ATCATACAATTGGATGGATG+AGG | 0.563319 | 2.2:-73966040 | None:intergenic |
CAGCTTATAATTCCTTCATG+AGG | 0.566205 | 2.2:-73967720 | None:intergenic |
AGACATCACACAAAAGTTGA+AGG | 0.566338 | 2.2:+73967675 | MS.gene047243:CDS |
TGGCAGGAGTGTTGCCAGCA+CGG | 0.567905 | 2.2:-73965540 | None:intergenic |
CCAAAAGTTCATGATTATGG+TGG | 0.568510 | 2.2:-73965690 | None:intergenic |
GAAGATATCATACAATTGGA+TGG | 0.569457 | 2.2:-73966046 | None:intergenic |
AGCTTATAATTCCTTCATGA+GGG | 0.573229 | 2.2:-73967719 | None:intergenic |
TTCTGGAGGCCCAAATTCAG+TGG | 0.573388 | 2.2:-73965644 | None:intergenic |
TCTTATGCGAGACAGAAGAA+TGG | 0.582203 | 2.2:-73968003 | None:intergenic |
CGACTTTGAACTAGGCTGGA+GGG | 0.582819 | 2.2:+73967000 | MS.gene047243:CDS |
AATAGAAAATCTTCCAGATG+TGG | 0.584217 | 2.2:+73965592 | MS.gene047243:CDS |
GGAAAAGACGGTGTTGGCAA+AGG | 0.584524 | 2.2:+73965490 | MS.gene047243:CDS |
ACTTAGAAACCGTTGAATGA+AGG | 0.586482 | 2.2:-73967164 | None:intergenic |
AAGTTCATGATTATGGTGGT+TGG | 0.589394 | 2.2:-73965686 | None:intergenic |
ATGCATATCTTCCCATCCGA+TGG | 0.597365 | 2.2:+73967829 | MS.gene047243:CDS |
AGCACACAGCCAAAGAAGCA+GGG | 0.598142 | 2.2:-73966159 | None:intergenic |
GTTTACTGGTCCCCTCATGA+AGG | 0.604499 | 2.2:+73967708 | MS.gene047243:CDS |
GATGGATGAGGCATACGACC+AGG | 0.609900 | 2.2:-73966028 | None:intergenic |
CCAGTGACGCGCCATTCTGG+AGG | 0.616513 | 2.2:-73965658 | None:intergenic |
TGATATCTTCGGTGATGCTG+TGG | 0.618259 | 2.2:+73966059 | MS.gene047243:CDS |
ACCGAAGGAAAAGACGGTGT+TGG | 0.619616 | 2.2:+73965484 | MS.gene047243:CDS |
GCACACTGATACGACGCCAT+CGG | 0.621865 | 2.2:-73967845 | None:intergenic |
TTATGGCCCAGGAAAATGAC+CGG | 0.623189 | 2.2:-73966200 | None:intergenic |
CTGCATTTGACATGCCGCTG+GGG | 0.625737 | 2.2:+73966106 | MS.gene047243:CDS |
GGATGGGAAGATATGCATCT+GGG | 0.625859 | 2.2:-73967824 | None:intergenic |
ATTAGACGTCATCGTACCGA+AGG | 0.626176 | 2.2:+73965469 | MS.gene047243:CDS |
TCATAAGCAGCATCGTGAGT+GGG | 0.627606 | 2.2:-73965409 | None:intergenic |
GGTTTCTAAGTGCACAGACA+CGG | 0.627911 | 2.2:+73967176 | MS.gene047243:CDS |
GTCATAAGCAGCATCGTGAG+TGG | 0.636238 | 2.2:-73965410 | None:intergenic |
TCGAAAAGGCAAAAGGAGTG+AGG | 0.641424 | 2.2:-73967584 | None:intergenic |
GCTTATAATTCCTTCATGAG+GGG | 0.641658 | 2.2:-73967718 | None:intergenic |
ACGTCTAATAGAGAAGCCGC+AGG | 0.646866 | 2.2:-73965455 | None:intergenic |
ACGACTTTGAACTAGGCTGG+AGG | 0.648729 | 2.2:+73966999 | MS.gene047243:CDS |
TAGCAGCGTGCGATTCCATG+GGG | 0.649314 | 2.2:-73967557 | None:intergenic |
TGAACGCTACAATGACTGGA+AGG | 0.649833 | 2.2:+73966940 | MS.gene047243:CDS |
ATATAGTTCTGTATGCAGGA+AGG | 0.660408 | 2.2:-73965732 | None:intergenic |
AGAACAGCATTGAACCAAGA+CGG | 0.662125 | 2.2:-73966914 | None:intergenic |
CATCGTACCGAAGGAAAAGA+CGG | 0.676411 | 2.2:+73965478 | MS.gene047243:CDS |
ATCCCAATCCATATCCCCAG+CGG | 0.701870 | 2.2:-73966120 | None:intergenic |
CATCACACAAAAGTTGAAGG+AGG | 0.714854 | 2.2:+73967678 | MS.gene047243:CDS |
AGCAGCGTGCGATTCCATGG+GGG | 0.736419 | 2.2:-73967556 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTATTCCAATTTTATAAAA+TGG | + | chr2.2:73966486-73966505 | MS.gene047243:intron | 10.0% |
!! | AAAATTGGAATAAAAAGAAA+TGG | - | chr2.2:73966480-73966499 | None:intergenic | 15.0% |
!! | AAATTGGAATAAAAAGAAAT+GGG | - | chr2.2:73966479-73966498 | None:intergenic | 15.0% |
!!! | ATGTTTTGATTTTTTTACAT+TGG | + | chr2.2:73967242-73967261 | MS.gene047243:intron | 15.0% |
!!! | ATTCTTTTCTGAAATAATAC+TGG | + | chr2.2:73966296-73966315 | MS.gene047243:intron | 20.0% |
!!! | GTGTACTCAAATTTAAAATT+AGG | - | chr2.2:73965976-73965995 | None:intergenic | 20.0% |
!!! | TTATTGATTAACAACCTTTA+TGG | - | chr2.2:73966220-73966239 | None:intergenic | 20.0% |
! | AAAAAAAACAAACTAGCACA+AGG | - | chr2.2:73966456-73966475 | None:intergenic | 25.0% |
! | AAATTCCAGAAAATTCAAAC+TGG | - | chr2.2:73967755-73967774 | None:intergenic | 25.0% |
! | AAATTTATGAACATTCCACA+AGG | - | chr2.2:73966561-73966580 | None:intergenic | 25.0% |
! | AACCAGTGTAAATTAAAGAA+TGG | - | chr2.2:73966734-73966753 | None:intergenic | 25.0% |
! | AAGAATGTGCAGAAATATTA+AGG | + | chr2.2:73965942-73965961 | MS.gene047243:CDS | 25.0% |
! | AATTTATGAACATTCCACAA+GGG | - | chr2.2:73966560-73966579 | None:intergenic | 25.0% |
! | AGTTAAGCTATTCCAAAATA+TGG | + | chr2.2:73967914-73967933 | MS.gene047243:CDS | 25.0% |
! | ATCCAATTGTATGATATCTT+CGG | + | chr2.2:73966048-73966067 | MS.gene047243:CDS | 25.0% |
! | ATTTAGTATCTCCAAAAAGT+AGG | - | chr2.2:73967408-73967427 | None:intergenic | 25.0% |
! | TATTTCAGAAAAGAATCCAA+GGG | - | chr2.2:73966292-73966311 | None:intergenic | 25.0% |
! | TTATTAGCGTCTATATCATT+TGG | + | chr2.2:73966241-73966260 | MS.gene047243:intron | 25.0% |
! | TTATTTCAGAAAAGAATCCA+AGG | - | chr2.2:73966293-73966312 | None:intergenic | 25.0% |
!! | AACCATTCTTTAATTTACAC+TGG | + | chr2.2:73966729-73966748 | MS.gene047243:intron | 25.0% |
!! | ATATTTGCCTTTTACTGAAA+AGG | + | chr2.2:73965855-73965874 | MS.gene047243:CDS | 25.0% |
!! | CCAATTTTATAAAATGGTGA+AGG | + | chr2.2:73966492-73966511 | MS.gene047243:intron | 25.0% |
!! | CCTTCACCATTTTATAAAAT+TGG | - | chr2.2:73966495-73966514 | None:intergenic | 25.0% |
!! | GATCTAATTTTCTAAATGAC+TGG | - | chr2.2:73965897-73965916 | None:intergenic | 25.0% |
!! | TAAATTAACAATGTGTCGAT+TGG | - | chr2.2:73967053-73967072 | None:intergenic | 25.0% |
!! | TGGATTGGGATAAATAATTA+TGG | + | chr2.2:73966132-73966151 | MS.gene047243:CDS | 25.0% |
!! | TTAGAGATGAAACCATATTT+TGG | - | chr2.2:73967929-73967948 | None:intergenic | 25.0% |
!!! | AATTTTCTGGAATTTTGTGT+AGG | + | chr2.2:73967760-73967779 | MS.gene047243:CDS | 25.0% |
!!! | CTTTCTTAGGTTTTATGAAT+GGG | + | chr2.2:73966777-73966796 | MS.gene047243:CDS | 25.0% |
!!! | GTTGATTTTAAAGATCAAAC+TGG | + | chr2.2:73967480-73967499 | MS.gene047243:CDS | 25.0% |
!!! | TTTTGAAGAATCTTAGAAGA+AGG | - | chr2.2:73967870-73967889 | None:intergenic | 25.0% |
!!! | TTTTGATTCAAATTGTGTTG+TGG | + | chr2.2:73966265-73966284 | MS.gene047243:intron | 25.0% |
AATAGAAAATCTTCCAGATG+TGG | + | chr2.2:73965592-73965611 | MS.gene047243:CDS | 30.0% | |
AGAAAATGGCTTCTTAGATA+TGG | - | chr2.2:73967103-73967122 | None:intergenic | 30.0% | |
AGCTTATAATTCCTTCATGA+GGG | - | chr2.2:73967722-73967741 | None:intergenic | 30.0% | |
ATAAAAAAACTGCACTGTCT+TGG | + | chr2.2:73966371-73966390 | MS.gene047243:intron | 30.0% | |
ATAAGCAAAACCACTGAATT+TGG | + | chr2.2:73965634-73965653 | MS.gene047243:CDS | 30.0% | |
ATCTAATCGTTCTTTAGACT+TGG | - | chr2.2:73967964-73967983 | None:intergenic | 30.0% | |
ATTTCAGAAAAGAATCCAAG+GGG | - | chr2.2:73966291-73966310 | None:intergenic | 30.0% | |
CAATGATCATTCACATTTCA+TGG | + | chr2.2:73967270-73967289 | MS.gene047243:intron | 30.0% | |
CCAAAATTCACAGAAAGATA+AGG | - | chr2.2:73967431-73967450 | None:intergenic | 30.0% | |
GAAGATATCATACAATTGGA+TGG | - | chr2.2:73966049-73966068 | None:intergenic | 30.0% | |
GATTTGTATTAACCTCCATT+TGG | - | chr2.2:73966402-73966421 | None:intergenic | 30.0% | |
GCACATTCTTAACAAATCTA+GGG | - | chr2.2:73965932-73965951 | None:intergenic | 30.0% | |
GGAAAAAAAAAACTAGCACA+AGG | - | chr2.2:73966595-73966614 | None:intergenic | 30.0% | |
GTCTAAAGAACGATTAGATA+TGG | + | chr2.2:73967965-73967984 | MS.gene047243:CDS | 30.0% | |
GTTCCAAAAGTTCATGATTA+TGG | - | chr2.2:73965696-73965715 | None:intergenic | 30.0% | |
TAAGCAAAACCACTGAATTT+GGG | + | chr2.2:73965635-73965654 | MS.gene047243:CDS | 30.0% | |
TATCAGATGCTGACAAAAAT+CGG | + | chr2.2:73965752-73965771 | MS.gene047243:CDS | 30.0% | |
TCATCAAATGATGAGACTTA+TGG | + | chr2.2:73965807-73965826 | MS.gene047243:CDS | 30.0% | |
TGATCAGTTAATATAGTCTG+TGG | - | chr2.2:73966809-73966828 | None:intergenic | 30.0% | |
TGCACATTCTTAACAAATCT+AGG | - | chr2.2:73965933-73965952 | None:intergenic | 30.0% | |
TTGGAATAGCTTAACTCTTT+CGG | - | chr2.2:73967910-73967929 | None:intergenic | 30.0% | |
! | ACCAGGCAATATTTTCTAAA+CGG | - | chr2.2:73966014-73966033 | None:intergenic | 30.0% |
! | CCTTATCTTTCTGTGAATTT+TGG | + | chr2.2:73967428-73967447 | MS.gene047243:intron | 30.0% |
! | GAAGATTTTCTATTTCGTTG+AGG | - | chr2.2:73965586-73965605 | None:intergenic | 30.0% |
! | TTTTTATTCACCTTCTTGGT+AGG | + | chr2.2:73966754-73966773 | MS.gene047243:intron | 30.0% |
!! | GCTTTCTTAGGTTTTATGAA+TGG | + | chr2.2:73966776-73966795 | MS.gene047243:CDS | 30.0% |
!! | GTGAACTTTATCCTACTTTT+TGG | + | chr2.2:73967394-73967413 | MS.gene047243:intron | 30.0% |
!! | TTTCTGAAATAATACTGGTG+TGG | + | chr2.2:73966301-73966320 | MS.gene047243:intron | 30.0% |
!!! | CTTTTATTTTTACTCCCTTG+TGG | + | chr2.2:73966543-73966562 | MS.gene047243:intron | 30.0% |
!!! | GGTTTTTTTATTCACCTTCT+TGG | + | chr2.2:73966750-73966769 | MS.gene047243:intron | 30.0% |
AAGTTCATGATTATGGTGGT+TGG | - | chr2.2:73965689-73965708 | None:intergenic | 35.0% | |
ACAAATCAAAGCCTACACTT+TGG | + | chr2.2:73966415-73966434 | MS.gene047243:intron | 35.0% | |
ACCGTTTAGAAAATATTGCC+TGG | + | chr2.2:73966010-73966029 | MS.gene047243:CDS | 35.0% | |
ACTGTCTTGGATATACCAAA+TGG | + | chr2.2:73966384-73966403 | MS.gene047243:intron | 35.0% | |
ACTTAGAAACCGTTGAATGA+AGG | - | chr2.2:73967167-73967186 | None:intergenic | 35.0% | |
AGACATCACACAAAAGTTGA+AGG | + | chr2.2:73967675-73967694 | MS.gene047243:CDS | 35.0% | |
ATCATACAATTGGATGGATG+AGG | - | chr2.2:73966043-73966062 | None:intergenic | 35.0% | |
ATCCTTATGTTTGCCAAAAC+AGG | + | chr2.2:73965775-73965794 | MS.gene047243:CDS | 35.0% | |
ATTTCGTTGAGGCTTAGTTT+GGG | - | chr2.2:73965575-73965594 | None:intergenic | 35.0% | |
CAAAACATGCTTTCTGCATA+TGG | + | chr2.2:73966873-73966892 | MS.gene047243:CDS | 35.0% | |
CAATTAACGCCTTCATTCAA+CGG | + | chr2.2:73967155-73967174 | MS.gene047243:CDS | 35.0% | |
CACCGAAGATATCATACAAT+TGG | - | chr2.2:73966053-73966072 | None:intergenic | 35.0% | |
CAGCTTATAATTCCTTCATG+AGG | - | chr2.2:73967723-73967742 | None:intergenic | 35.0% | |
CCAAAAGTTCATGATTATGG+TGG | - | chr2.2:73965693-73965712 | None:intergenic | 35.0% | |
CTGGCACATTGTAATGAAAT+TGG | - | chr2.2:73968035-73968054 | None:intergenic | 35.0% | |
GCTTATAATTCCTTCATGAG+GGG | - | chr2.2:73967721-73967740 | None:intergenic | 35.0% | |
TAAACGGTTGTTTGCATCAA+GGG | - | chr2.2:73965998-73966017 | None:intergenic | 35.0% | |
TATTTCGTTGAGGCTTAGTT+TGG | - | chr2.2:73965576-73965595 | None:intergenic | 35.0% | |
TCAGTAAAAGGCAAATATCC+AGG | - | chr2.2:73965853-73965872 | None:intergenic | 35.0% | |
TCCTTATGTTTGCCAAAACA+GGG | + | chr2.2:73965776-73965795 | MS.gene047243:CDS | 35.0% | |
TGCATACATTTCCAAAGTGT+AGG | - | chr2.2:73966429-73966448 | None:intergenic | 35.0% | |
TTGTTCTTGAAGCTTCGAAA+AGG | - | chr2.2:73967601-73967620 | None:intergenic | 35.0% | |
! | AAATCTAGGGTTTCTTCTTC+TGG | - | chr2.2:73965919-73965938 | None:intergenic | 35.0% |
! | ATATAGTTCTGTATGCAGGA+AGG | - | chr2.2:73965735-73965754 | None:intergenic | 35.0% |
! | ATGAACAGAAATCCCTGTTT+TGG | - | chr2.2:73965791-73965810 | None:intergenic | 35.0% |
! | CAAAATGTTAGCCTCAAAAC+AGG | + | chr2.2:73967531-73967550 | MS.gene047243:CDS | 35.0% |
! | CCACCATAATCATGAACTTT+TGG | + | chr2.2:73965690-73965709 | MS.gene047243:CDS | 35.0% |
! | CTTACGTCCTTTTCAGTAAA+AGG | - | chr2.2:73965865-73965884 | None:intergenic | 35.0% |
! | CTTTTACTGAAAAGGACGTA+AGG | + | chr2.2:73965863-73965882 | MS.gene047243:CDS | 35.0% |
! | TCTGATATAGTTCTGTATGC+AGG | - | chr2.2:73965739-73965758 | None:intergenic | 35.0% |
! | TGTCACCAGTTTGAATTTTC+TGG | + | chr2.2:73967747-73967766 | MS.gene047243:CDS | 35.0% |
!! | CTTAGGTTTTATGAATGGGA+AGG | + | chr2.2:73966781-73966800 | MS.gene047243:CDS | 35.0% |
!! | CTTAGTTTGGGTTGATGATT+TGG | - | chr2.2:73965563-73965582 | None:intergenic | 35.0% |
!! | TCTAAGAAGCCATTTTCTTG+CGG | + | chr2.2:73967105-73967124 | MS.gene047243:CDS | 35.0% |
!!! | CTGTTTTGAGGCTAACATTT+TGG | - | chr2.2:73967533-73967552 | None:intergenic | 35.0% |
!!! | GCATCTTTTTCAGTTGAAGA+TGG | + | chr2.2:73967642-73967661 | MS.gene047243:CDS | 35.0% |
ATTAACAACCTTTATGGCCC+AGG | - | chr2.2:73966214-73966233 | None:intergenic | 40.0% | |
CATCACACAAAAGTTGAAGG+AGG | + | chr2.2:73967678-73967697 | MS.gene047243:CDS | 40.0% | |
CCAGAGATACTTCTACCATT+AGG | + | chr2.2:73968051-73968070 | MS.gene047243:CDS | 40.0% | |
CTAAACGGTTGTTTGCATCA+AGG | - | chr2.2:73965999-73966018 | None:intergenic | 40.0% | |
GAGACAGAAGAATGGAAACT+TGG | - | chr2.2:73967998-73968017 | None:intergenic | 40.0% | |
GCTTCAAGAACAACTTGTGT+TGG | + | chr2.2:73967608-73967627 | MS.gene047243:CDS | 40.0% | |
GTCTTGGATATACCAAATGG+AGG | + | chr2.2:73966387-73966406 | MS.gene047243:intron | 40.0% | |
TACTGCAAGATGAAACTGTC+CGG | + | chr2.2:73966181-73966200 | MS.gene047243:CDS | 40.0% | |
TAGTAGCAAAGTTTCCGTCT+TGG | + | chr2.2:73966900-73966919 | MS.gene047243:CDS | 40.0% | |
TAGTCATTCCCGCAAGAAAA+TGG | - | chr2.2:73967117-73967136 | None:intergenic | 40.0% | |
TCAGTTGACGACTTTGAACT+AGG | + | chr2.2:73966992-73967011 | MS.gene047243:CDS | 40.0% | |
TCTTATGCGAGACAGAAGAA+TGG | - | chr2.2:73968006-73968025 | None:intergenic | 40.0% | |
TCTTGGTTCAATGCTGTTCT+AGG | + | chr2.2:73966917-73966936 | MS.gene047243:CDS | 40.0% | |
TGAAGCTTCGAAAAGGCAAA+AGG | - | chr2.2:73967594-73967613 | None:intergenic | 40.0% | |
! | AGAACAGCATTGAACCAAGA+CGG | - | chr2.2:73966917-73966936 | None:intergenic | 40.0% |
! | TCTCTGAGAGTTCTTTCAAC+AGG | + | chr2.2:73967786-73967805 | MS.gene047243:CDS | 40.0% |
!! | ATTTTGGAGATTCTGCTGCA+TGG | - | chr2.2:73967517-73967536 | None:intergenic | 40.0% |
!! | CCTAATGGTAGAAGTATCTC+TGG | - | chr2.2:73968054-73968073 | None:intergenic | 40.0% |
!! | CTAAGAAGCCATTTTCTTGC+GGG | + | chr2.2:73967106-73967125 | MS.gene047243:CDS | 40.0% |
!!! | TCCCTGTTTTGGCAAACATA+AGG | - | chr2.2:73965780-73965799 | None:intergenic | 40.0% |
ATAAGCCTGACAACCACATC+TGG | - | chr2.2:73965608-73965627 | None:intergenic | 45.0% | |
ATATAGCTCGCGCTCACTTT+GGG | + | chr2.2:73967072-73967091 | MS.gene047243:CDS | 45.0% | |
ATCTTCCAGATGTGGTTGTC+AGG | + | chr2.2:73965600-73965619 | MS.gene047243:CDS | 45.0% | |
ATGCAGGAAGGAATCGAACT+TGG | - | chr2.2:73965723-73965742 | None:intergenic | 45.0% | |
ATGCATATCTTCCCATCCGA+TGG | + | chr2.2:73967829-73967848 | MS.gene047243:CDS | 45.0% | |
ATTAGACGTCATCGTACCGA+AGG | + | chr2.2:73965469-73965488 | MS.gene047243:CDS | 45.0% | |
CATCGTACCGAAGGAAAAGA+CGG | + | chr2.2:73965478-73965497 | MS.gene047243:CDS | 45.0% | |
CCTAAGAAAGCCTACCAAGA+AGG | - | chr2.2:73966767-73966786 | None:intergenic | 45.0% | |
CCTTCTTGGTAGGCTTTCTT+AGG | + | chr2.2:73966764-73966783 | MS.gene047243:intron | 45.0% | |
GCTTGCTCACTTTGTTGAAC+AGG | + | chr2.2:73967198-73967217 | MS.gene047243:CDS | 45.0% | |
GGAAGGAATCGAACTTGGTT+TGG | - | chr2.2:73965718-73965737 | None:intergenic | 45.0% | |
GGATGGGAAGATATGCATCT+GGG | - | chr2.2:73967827-73967846 | None:intergenic | 45.0% | |
GGTTTCTAAGTGCACAGACA+CGG | + | chr2.2:73967176-73967195 | MS.gene047243:CDS | 45.0% | |
TAGGTGAACGCTACAATGAC+TGG | + | chr2.2:73966936-73966955 | MS.gene047243:CDS | 45.0% | |
TATATAGCTCGCGCTCACTT+TGG | + | chr2.2:73967071-73967090 | MS.gene047243:CDS | 45.0% | |
TATGGAATGCCCTGCTTCTT+TGG | + | chr2.2:73966150-73966169 | MS.gene047243:CDS | 45.0% | |
TCATAAGCAGCATCGTGAGT+GGG | - | chr2.2:73965412-73965431 | None:intergenic | 45.0% | |
TCGAAAAGGCAAAAGGAGTG+AGG | - | chr2.2:73967587-73967606 | None:intergenic | 45.0% | |
TGAACGCTACAATGACTGGA+AGG | + | chr2.2:73966940-73966959 | MS.gene047243:CDS | 45.0% | |
TGATATCTTCGGTGATGCTG+TGG | + | chr2.2:73966059-73966078 | MS.gene047243:CDS | 45.0% | |
TTATGGCCCAGGAAAATGAC+CGG | - | chr2.2:73966203-73966222 | None:intergenic | 45.0% | |
TTGACGACTTTGAACTAGGC+TGG | + | chr2.2:73966996-73967015 | MS.gene047243:CDS | 45.0% | |
! | ACTCATTTTGCCAAGACCTG+CGG | + | chr2.2:73965439-73965458 | MS.gene047243:CDS | 45.0% |
! | AGGGAGATGGTCTGTTCTTT+TGG | + | chr2.2:73967019-73967038 | MS.gene047243:CDS | 45.0% |
! | GGGAGATGGTCTGTTCTTTT+GGG | + | chr2.2:73967020-73967039 | MS.gene047243:CDS | 45.0% |
! | TACTTTGTTTGTCACCGTGC+TGG | + | chr2.2:73965526-73965545 | MS.gene047243:CDS | 45.0% |
! | TTTGGTTCGCTTTGCACAAC+AGG | + | chr2.2:73967446-73967465 | MS.gene047243:intron | 45.0% |
!! | AAACTGTCCGGTCATTTTCC+TGG | + | chr2.2:73966193-73966212 | MS.gene047243:CDS | 45.0% |
!! | AACTGTCCGGTCATTTTCCT+GGG | + | chr2.2:73966194-73966213 | MS.gene047243:CDS | 45.0% |
!! | GTCATTTTCCTGGGCCATAA+AGG | + | chr2.2:73966203-73966222 | MS.gene047243:CDS | 45.0% |
!! | GTTTGGGTTGATGATTTGGC+AGG | - | chr2.2:73965559-73965578 | None:intergenic | 45.0% |
AAGGAGGTCGCAGAGTTTAC+TGG | + | chr2.2:73967694-73967713 | MS.gene047243:CDS | 50.0% | |
AATAGAGAAGCCGCAGGTCT+TGG | - | chr2.2:73965452-73965471 | None:intergenic | 50.0% | |
ACCGAAGGAAAAGACGGTGT+TGG | + | chr2.2:73965484-73965503 | MS.gene047243:CDS | 50.0% | |
ACGACTTTGAACTAGGCTGG+AGG | + | chr2.2:73966999-73967018 | MS.gene047243:CDS | 50.0% | |
ACGTCTAATAGAGAAGCCGC+AGG | - | chr2.2:73965458-73965477 | None:intergenic | 50.0% | |
ACTCTTTCGGCATGATCGCT+AGG | - | chr2.2:73967897-73967916 | None:intergenic | 50.0% | |
ACTGCATTTGACATGCCGCT+GGG | + | chr2.2:73966105-73966124 | MS.gene047243:CDS | 50.0% | |
AGCACACAGCCAAAGAAGCA+GGG | - | chr2.2:73966162-73966181 | None:intergenic | 50.0% | |
ATCCCAATCCATATCCCCAG+CGG | - | chr2.2:73966123-73966142 | None:intergenic | 50.0% | |
CAAATTGTGTTGTGGCCCCT+TGG | + | chr2.2:73966273-73966292 | MS.gene047243:intron | 50.0% | |
CGACTTTGAACTAGGCTGGA+GGG | + | chr2.2:73967000-73967019 | MS.gene047243:CDS | 50.0% | |
CGGATGGGAAGATATGCATC+TGG | - | chr2.2:73967828-73967847 | None:intergenic | 50.0% | |
CTGAATTTGGGCCTCCAGAA+TGG | + | chr2.2:73965647-73965666 | MS.gene047243:CDS | 50.0% | |
CTTGCGGGAATGACTACAAC+TGG | + | chr2.2:73967121-73967140 | MS.gene047243:CDS | 50.0% | |
GTCATAAGCAGCATCGTGAG+TGG | - | chr2.2:73965413-73965432 | None:intergenic | 50.0% | |
GTTTACTGGTCCCCTCATGA+AGG | + | chr2.2:73967708-73967727 | MS.gene047243:CDS | 50.0% | |
TAGCACACAGCCAAAGAAGC+AGG | - | chr2.2:73966163-73966182 | None:intergenic | 50.0% | |
! | GCCAACACCGTCTTTTCCTT+CGG | - | chr2.2:73965488-73965507 | None:intergenic | 50.0% |
! | TTCTGGAGGCCCAAATTCAG+TGG | - | chr2.2:73965647-73965666 | None:intergenic | 50.0% |
!! | GGAAAAGACGGTGTTGGCAA+AGG | + | chr2.2:73965490-73965509 | MS.gene047243:CDS | 50.0% |
!! | TGGTGAAGGTACTTCAGCTG+TGG | + | chr2.2:73966643-73966662 | MS.gene047243:intron | 50.0% |
AAACCAGTGACGCGCCATTC+TGG | - | chr2.2:73965664-73965683 | None:intergenic | 55.0% | |
ACTGATACGACGCCATCGGA+TGG | - | chr2.2:73967844-73967863 | None:intergenic | 55.0% | |
ATGCCGCTGGGGATATGGAT+TGG | + | chr2.2:73966117-73966136 | MS.gene047243:CDS | 55.0% | |
CACTGCATTTGACATGCCGC+TGG | + | chr2.2:73966104-73966123 | MS.gene047243:CDS | 55.0% | |
CATGGAATCGCACGCTGCTA+CGG | + | chr2.2:73967560-73967579 | MS.gene047243:CDS | 55.0% | |
CTGATACGACGCCATCGGAT+GGG | - | chr2.2:73967843-73967862 | None:intergenic | 55.0% | |
CTGCATTTGACATGCCGCTG+GGG | + | chr2.2:73966106-73966125 | MS.gene047243:CDS | 55.0% | |
GATGGATGAGGCATACGACC+AGG | - | chr2.2:73966031-73966050 | None:intergenic | 55.0% | |
GCACACTGATACGACGCCAT+CGG | - | chr2.2:73967848-73967867 | None:intergenic | 55.0% | |
GTAGCAGCGTGCGATTCCAT+GGG | - | chr2.2:73967561-73967580 | None:intergenic | 55.0% | |
TAGCAGCGTGCGATTCCATG+GGG | - | chr2.2:73967560-73967579 | None:intergenic | 55.0% | |
TGAACTAGGCTGGAGGGAGA+TGG | + | chr2.2:73967006-73967025 | MS.gene047243:CDS | 55.0% | |
TGCCGCTGGGGATATGGATT+GGG | + | chr2.2:73966118-73966137 | MS.gene047243:CDS | 55.0% | |
TTGACATGCCGCTGGGGATA+TGG | + | chr2.2:73966112-73966131 | MS.gene047243:CDS | 55.0% | |
! | CTTGAGAAGTGCGTCGAACC+TGG | + | chr2.2:73965832-73965851 | MS.gene047243:CDS | 55.0% |
! | TGGTGAAGGTACGTCAGCTG+TGG | + | chr2.2:73966506-73966525 | MS.gene047243:intron | 55.0% |
AGCAGCGTGCGATTCCATGG+GGG | - | chr2.2:73967559-73967578 | None:intergenic | 60.0% | |
CCTCAAAACAGGAGCCCCCA+TGG | + | chr2.2:73967542-73967561 | MS.gene047243:CDS | 60.0% | |
CGTAGCAGCGTGCGATTCCA+TGG | - | chr2.2:73967562-73967581 | None:intergenic | 60.0% | |
! | CCATGGGGGCTCCTGTTTTG+AGG | - | chr2.2:73967545-73967564 | None:intergenic | 60.0% |
!! | TGGCAGGAGTGTTGCCAGCA+CGG | - | chr2.2:73965543-73965562 | None:intergenic | 60.0% |
CCAGTGACGCGCCATTCTGG+AGG | - | chr2.2:73965661-73965680 | None:intergenic | 65.0% | |
CCTCCAGAATGGCGCGTCAC+TGG | + | chr2.2:73965658-73965677 | MS.gene047243:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.2 | gene | 73965403 | 73968082 | 73965403 | ID=MS.gene047243 |
chr2.2 | mRNA | 73965403 | 73968082 | 73965403 | ID=MS.gene047243.t1;Parent=MS.gene047243 |
chr2.2 | exon | 73965403 | 73966224 | 73965403 | ID=MS.gene047243.t1.exon1;Parent=MS.gene047243.t1 |
chr2.2 | CDS | 73965403 | 73966224 | 73965403 | ID=cds.MS.gene047243.t1;Parent=MS.gene047243.t1 |
chr2.2 | exon | 73966776 | 73967219 | 73966776 | ID=MS.gene047243.t1.exon2;Parent=MS.gene047243.t1 |
chr2.2 | CDS | 73966776 | 73967219 | 73966776 | ID=cds.MS.gene047243.t1;Parent=MS.gene047243.t1 |
chr2.2 | exon | 73967468 | 73968082 | 73967468 | ID=MS.gene047243.t1.exon3;Parent=MS.gene047243.t1 |
chr2.2 | CDS | 73967468 | 73968082 | 73967468 | ID=cds.MS.gene047243.t1;Parent=MS.gene047243.t1 |
Gene Sequence |
Protein sequence |