Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene047277.t1 | XP_024632961.1 | 84.9 | 793 | 92 | 4 | 1 | 765 | 1 | 793 | 0.00E+00 | 1344.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene047277.t1 | Q9SZL8 | 26.1 | 725 | 455 | 14 | 32 | 745 | 70 | 724 | 6.9e-62 | 240.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene047277.t1 | D3YBB9 | 76.9 | 774 | 159 | 4 | 1 | 764 | 49 | 812 | 0.0e+00 | 1192.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene047277.t1 | TF | FAR1 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene047277.t1 | MTR_0558s0020 | 87.500 | 296 | 36 | 1 | 1 | 295 | 1 | 296 | 0.0 | 548 |
MS.gene047277.t1 | MTR_1g083640 | 83.099 | 284 | 32 | 1 | 1 | 268 | 1 | 284 | 1.76e-172 | 497 |
MS.gene047277.t1 | MTR_8g446020 | 73.898 | 295 | 38 | 1 | 1 | 295 | 1 | 256 | 1.04e-152 | 445 |
MS.gene047277.t1 | MTR_6g090505 | 83.544 | 237 | 39 | 0 | 65 | 301 | 1 | 237 | 1.62e-142 | 423 |
MS.gene047277.t1 | MTR_6g090505 | 66.667 | 102 | 7 | 2 | 396 | 495 | 230 | 306 | 1.16e-33 | 133 |
MS.gene047277.t1 | MTR_6g090505 | 77.551 | 49 | 11 | 0 | 567 | 615 | 314 | 362 | 9.15e-12 | 67.8 |
MS.gene047277.t1 | MTR_2g014100 | 82.041 | 245 | 35 | 1 | 1 | 236 | 1 | 245 | 1.13e-141 | 417 |
MS.gene047277.t1 | MTR_0337s0040 | 72.308 | 260 | 32 | 2 | 1 | 259 | 1 | 221 | 3.03e-124 | 371 |
MS.gene047277.t1 | MTR_3g008240 | 84.236 | 203 | 31 | 1 | 1 | 202 | 1 | 203 | 5.75e-118 | 354 |
MS.gene047277.t1 | MTR_4g040430 | 83.663 | 202 | 29 | 1 | 1 | 202 | 1 | 198 | 1.91e-117 | 352 |
MS.gene047277.t1 | MTR_0337s0060 | 59.177 | 316 | 29 | 4 | 447 | 759 | 21 | 239 | 5.93e-110 | 334 |
MS.gene047277.t1 | MTR_5g071590 | 73.333 | 180 | 35 | 2 | 1 | 167 | 1 | 180 | 3.07e-89 | 278 |
MS.gene047277.t1 | MTR_1g055240 | 88.028 | 142 | 17 | 0 | 91 | 232 | 3 | 144 | 5.17e-87 | 271 |
MS.gene047277.t1 | MTR_0019s0290 | 82.237 | 152 | 27 | 0 | 82 | 233 | 9 | 160 | 2.42e-86 | 270 |
MS.gene047277.t1 | MTR_3g028680 | 80.795 | 151 | 26 | 1 | 618 | 765 | 1 | 151 | 2.57e-79 | 253 |
MS.gene047277.t1 | MTR_2g067090 | 77.703 | 148 | 30 | 1 | 621 | 765 | 99 | 246 | 3.21e-70 | 232 |
MS.gene047277.t1 | MTR_4g133495 | 63.536 | 181 | 40 | 2 | 576 | 753 | 88 | 245 | 7.41e-68 | 225 |
MS.gene047277.t1 | MTR_4g133340 | 63.536 | 181 | 40 | 2 | 576 | 753 | 88 | 245 | 7.41e-68 | 225 |
MS.gene047277.t1 | MTR_1281s0010 | 80.734 | 109 | 21 | 0 | 19 | 127 | 1 | 109 | 2.89e-56 | 188 |
MS.gene047277.t1 | MTR_6g051425 | 32.075 | 318 | 185 | 6 | 40 | 341 | 22 | 324 | 1.15e-38 | 147 |
MS.gene047277.t1 | MTR_4g008820 | 70.000 | 100 | 29 | 1 | 1 | 99 | 125 | 224 | 1.73e-31 | 131 |
MS.gene047277.t1 | MTR_8g046060 | 77.273 | 88 | 11 | 2 | 1 | 79 | 91 | 178 | 4.23e-31 | 121 |
MS.gene047277.t1 | MTR_1g070355 | 26.543 | 324 | 217 | 6 | 41 | 362 | 80 | 384 | 5.14e-19 | 92.0 |
MS.gene047277.t1 | MTR_2g067130 | 67.164 | 67 | 16 | 2 | 702 | 765 | 53 | 116 | 2.82e-18 | 82.8 |
MS.gene047277.t1 | MTR_0402s0040 | 25.405 | 185 | 119 | 4 | 49 | 233 | 40 | 205 | 1.59e-14 | 77.4 |
MS.gene047277.t1 | MTR_0337s0050 | 75.000 | 36 | 9 | 0 | 259 | 294 | 14 | 49 | 1.70e-13 | 66.6 |
MS.gene047277.t1 | MTR_4g035820 | 22.414 | 290 | 192 | 7 | 17 | 299 | 61 | 324 | 1.02e-12 | 72.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene047277.t1 | AT4G38180 | 27.457 | 641 | 385 | 13 | 32 | 665 | 70 | 637 | 1.26e-69 | 244 |
MS.gene047277.t1 | AT4G15090 | 24.688 | 721 | 449 | 16 | 50 | 753 | 66 | 709 | 1.24e-59 | 217 |
MS.gene047277.t1 | AT4G15090 | 24.688 | 721 | 449 | 16 | 50 | 753 | 66 | 709 | 1.24e-59 | 217 |
MS.gene047277.t1 | AT4G15090 | 24.688 | 721 | 449 | 16 | 50 | 753 | 66 | 709 | 1.24e-59 | 217 |
MS.gene047277.t1 | AT4G15090 | 24.688 | 721 | 449 | 16 | 50 | 753 | 66 | 709 | 1.24e-59 | 217 |
MS.gene047277.t1 | AT4G15090 | 24.688 | 721 | 449 | 16 | 50 | 753 | 66 | 709 | 1.24e-59 | 217 |
MS.gene047277.t1 | AT2G27110 | 26.298 | 597 | 366 | 15 | 127 | 719 | 108 | 634 | 5.72e-53 | 198 |
MS.gene047277.t1 | AT2G27110 | 26.298 | 597 | 366 | 15 | 127 | 719 | 108 | 634 | 5.72e-53 | 198 |
MS.gene047277.t1 | AT2G27110 | 27.308 | 509 | 313 | 11 | 213 | 719 | 36 | 489 | 1.16e-52 | 195 |
MS.gene047277.t1 | AT3G06250 | 24.961 | 633 | 352 | 16 | 34 | 661 | 189 | 703 | 7.79e-52 | 193 |
MS.gene047277.t1 | AT3G06250 | 24.961 | 633 | 352 | 16 | 34 | 661 | 189 | 703 | 7.79e-52 | 193 |
MS.gene047277.t1 | AT3G06250 | 24.961 | 633 | 352 | 16 | 34 | 661 | 189 | 703 | 7.79e-52 | 193 |
MS.gene047277.t1 | AT1G76320 | 24.704 | 676 | 413 | 19 | 50 | 719 | 12 | 597 | 7.56e-50 | 186 |
MS.gene047277.t1 | AT1G76320 | 24.704 | 676 | 413 | 19 | 50 | 719 | 12 | 597 | 2.07e-49 | 186 |
MS.gene047277.t1 | AT1G76320 | 24.704 | 676 | 413 | 19 | 50 | 719 | 12 | 597 | 2.07e-49 | 186 |
MS.gene047277.t1 | AT1G76320 | 24.704 | 676 | 413 | 19 | 50 | 719 | 12 | 597 | 2.25e-49 | 186 |
MS.gene047277.t1 | AT3G22170 | 23.259 | 675 | 410 | 17 | 34 | 696 | 69 | 647 | 3.72e-48 | 183 |
MS.gene047277.t1 | AT3G22170 | 23.259 | 675 | 410 | 17 | 34 | 696 | 69 | 647 | 3.72e-48 | 183 |
MS.gene047277.t1 | AT5G18960 | 24.420 | 647 | 361 | 18 | 24 | 661 | 200 | 727 | 2.89e-46 | 177 |
MS.gene047277.t1 | AT5G18960 | 24.420 | 647 | 361 | 18 | 24 | 661 | 200 | 727 | 2.89e-46 | 177 |
MS.gene047277.t1 | AT4G38170 | 25.058 | 431 | 265 | 11 | 235 | 662 | 24 | 399 | 1.32e-43 | 166 |
MS.gene047277.t1 | AT5G28530 | 24.257 | 639 | 387 | 17 | 40 | 660 | 60 | 619 | 1.42e-42 | 165 |
MS.gene047277.t1 | AT1G10240 | 24.719 | 623 | 377 | 19 | 49 | 659 | 62 | 604 | 4.49e-42 | 164 |
MS.gene047277.t1 | AT1G10240 | 24.719 | 623 | 377 | 19 | 49 | 659 | 62 | 604 | 4.49e-42 | 164 |
MS.gene047277.t1 | AT5G28530 | 24.100 | 639 | 384 | 18 | 40 | 660 | 60 | 615 | 9.95e-42 | 162 |
MS.gene047277.t1 | AT5G28530 | 24.100 | 639 | 384 | 18 | 40 | 660 | 60 | 615 | 9.95e-42 | 162 |
MS.gene047277.t1 | AT2G32250 | 24.027 | 745 | 429 | 21 | 4 | 743 | 10 | 622 | 1.54e-40 | 160 |
MS.gene047277.t1 | AT2G32250 | 24.027 | 745 | 429 | 21 | 4 | 743 | 10 | 622 | 1.97e-40 | 160 |
MS.gene047277.t1 | AT2G32250 | 24.027 | 745 | 429 | 21 | 4 | 743 | 10 | 622 | 1.97e-40 | 160 |
MS.gene047277.t1 | AT2G32250 | 24.027 | 745 | 429 | 21 | 4 | 743 | 10 | 622 | 2.04e-40 | 160 |
MS.gene047277.t1 | AT2G32250 | 24.027 | 745 | 429 | 21 | 4 | 743 | 10 | 622 | 2.04e-40 | 160 |
MS.gene047277.t1 | AT2G32250 | 24.027 | 745 | 429 | 21 | 4 | 743 | 10 | 622 | 2.04e-40 | 160 |
MS.gene047277.t1 | AT2G32250 | 24.034 | 699 | 397 | 19 | 50 | 743 | 12 | 581 | 9.52e-40 | 157 |
MS.gene047277.t1 | AT2G32250 | 24.034 | 699 | 397 | 19 | 50 | 743 | 12 | 581 | 1.27e-39 | 157 |
MS.gene047277.t1 | AT1G80010 | 23.890 | 653 | 374 | 23 | 41 | 662 | 101 | 661 | 4.31e-37 | 149 |
MS.gene047277.t1 | AT1G52520 | 22.311 | 623 | 408 | 15 | 41 | 662 | 91 | 638 | 1.42e-33 | 138 |
MS.gene047277.t1 | AT4G19990 | 28.358 | 268 | 185 | 4 | 219 | 483 | 163 | 426 | 4.23e-27 | 118 |
MS.gene047277.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 1.58e-12 | 71.6 |
MS.gene047277.t1 | AT4G19990 | 28.358 | 268 | 185 | 4 | 219 | 483 | 177 | 440 | 4.62e-27 | 118 |
MS.gene047277.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 509 | 629 | 1.71e-12 | 71.6 |
MS.gene047277.t1 | AT4G19990 | 28.358 | 268 | 185 | 4 | 219 | 483 | 106 | 369 | 4.70e-27 | 117 |
MS.gene047277.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 438 | 558 | 1.53e-12 | 71.6 |
MS.gene047277.t1 | AT4G19990 | 28.358 | 268 | 185 | 4 | 219 | 483 | 163 | 426 | 5.47e-27 | 117 |
MS.gene047277.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 1.61e-12 | 71.6 |
MS.gene047277.t1 | AT4G19990 | 28.358 | 268 | 185 | 4 | 219 | 483 | 163 | 426 | 5.47e-27 | 117 |
MS.gene047277.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 1.61e-12 | 71.6 |
MS.gene047277.t1 | AT4G19990 | 28.358 | 268 | 185 | 4 | 219 | 483 | 163 | 426 | 6.22e-27 | 117 |
MS.gene047277.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 1.54e-12 | 71.6 |
MS.gene047277.t1 | AT4G19990 | 28.358 | 268 | 185 | 4 | 219 | 483 | 163 | 426 | 6.22e-27 | 117 |
MS.gene047277.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 1.54e-12 | 71.6 |
MS.gene047277.t1 | AT5G28530 | 21.940 | 629 | 351 | 20 | 40 | 660 | 60 | 556 | 3.52e-23 | 105 |
MS.gene047277.t1 | AT5G28530 | 21.781 | 629 | 348 | 21 | 40 | 660 | 60 | 552 | 1.83e-22 | 103 |
Find 113 sgRNAs with CRISPR-Local
Find 169 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCATGCTGAGTTGGACTTTA+AGG | 0.133287 | 2.1:+64090184 | MS.gene047277:CDS |
TTTCGATGAGTTAACTAATT+TGG | 0.156761 | 2.1:+64089875 | MS.gene047277:CDS |
AGTCGCTTCTTTGACCTAAT+TGG | 0.186128 | 2.1:-64091010 | None:intergenic |
CTTTAGTCATTTCAACATTA+TGG | 0.194287 | 2.1:+64090142 | MS.gene047277:CDS |
CAACAAGATTATGCTCTATT+TGG | 0.198611 | 2.1:+64089091 | MS.gene047277:CDS |
TTCATTTCAGCTGCCTTTCT+TGG | 0.201003 | 2.1:+64089594 | MS.gene047277:intron |
CATCGTAAGAGTGTGTTATT+TGG | 0.276792 | 2.1:+64089627 | MS.gene047277:CDS |
TATGGTTTGAGGTTTCTTAT+TGG | 0.280533 | 2.1:-64089721 | None:intergenic |
TTCTTTGACCTAATTGGATT+TGG | 0.299426 | 2.1:-64091004 | None:intergenic |
AATCAGATTTCGACTACAAT+TGG | 0.318540 | 2.1:+64089916 | MS.gene047277:CDS |
TGTTCTTGAGGCAGGGAAAA+AGG | 0.322946 | 2.1:+64090856 | MS.gene047277:CDS |
GCCGATATTTATTGTTTGTT+CGG | 0.341758 | 2.1:-64089141 | None:intergenic |
GGTTTCGAATGTTGATGTTT+TGG | 0.354913 | 2.1:+64090439 | MS.gene047277:CDS |
ACTAGCCTGGTCTGTGTATA+TGG | 0.360230 | 2.1:-64089739 | None:intergenic |
TATGCATTGGTCTTCAGTTT+GGG | 0.370760 | 2.1:+64090016 | MS.gene047277:CDS |
CTCAACGGTGTTCTTGAGGC+AGG | 0.386173 | 2.1:+64090848 | MS.gene047277:CDS |
AACAATAAATATCGGCCATT+AGG | 0.388497 | 2.1:+64089148 | MS.gene047277:CDS |
ACCGAACAAACAATAAATAT+CGG | 0.389395 | 2.1:+64089140 | MS.gene047277:CDS |
GTATGCATTGGTCTTCAGTT+TGG | 0.392120 | 2.1:+64090015 | MS.gene047277:CDS |
GTCTTTAGTGCCAACATTCA+TGG | 0.395146 | 2.1:-64090732 | None:intergenic |
TTCTCATACTCAACAAGAAC+TGG | 0.395633 | 2.1:-64088611 | None:intergenic |
AAGAAAGACCAAATCCAATT+AGG | 0.397771 | 2.1:+64090996 | MS.gene047277:CDS |
TTTGGTCTTTCTTTGAACTT+TGG | 0.398856 | 2.1:-64090986 | None:intergenic |
TTCCTTCAAATACTATTATG+AGG | 0.399583 | 2.1:+64090316 | MS.gene047277:CDS |
GAGGAGTTTCTTATTTCTAA+AGG | 0.403538 | 2.1:+64090881 | MS.gene047277:CDS |
TAAAGAATCATGGAAGTCTT+TGG | 0.408500 | 2.1:+64088382 | MS.gene047277:CDS |
CATGTCGTATGTTTGAGAAC+CGG | 0.411671 | 2.1:+64090564 | MS.gene047277:CDS |
GATTATGATCTTCAAACCTT+GGG | 0.413114 | 2.1:-64090487 | None:intergenic |
ATAACACTGGATTCTCTGTT+AGG | 0.417808 | 2.1:+64088453 | MS.gene047277:CDS |
GGGTTGTCACAGTCGACATT+AGG | 0.419786 | 2.1:+64090522 | MS.gene047277:CDS |
CGATTATGATCTTCAAACCT+TGG | 0.425681 | 2.1:-64090488 | None:intergenic |
CGAGAAGTAAATGAAGTTCA+AGG | 0.430014 | 2.1:+64088788 | MS.gene047277:CDS |
AGCTGGAATATATTTGAAGT+TGG | 0.433136 | 2.1:+64088670 | MS.gene047277:CDS |
TGGTCTGTGTATATGGTTTG+AGG | 0.447350 | 2.1:-64089732 | None:intergenic |
GAAAGGGTTGGTTGTAAAGC+TGG | 0.447509 | 2.1:+64088653 | MS.gene047277:CDS |
CGCTTTAAAACATATTGTGC+AGG | 0.447633 | 2.1:-64090665 | None:intergenic |
CGTTATGCTTGTAACAAAGA+AGG | 0.449439 | 2.1:+64088536 | MS.gene047277:CDS |
GCTTTAATAAATTCTAAAGC+TGG | 0.450264 | 2.1:+64088818 | MS.gene047277:CDS |
ATCTGAGAGTGGACAATTGA+CGG | 0.452529 | 2.1:+64088307 | MS.gene047277:CDS |
TGGTCTTTGCTCATGGCACA+TGG | 0.452802 | 2.1:+64089806 | MS.gene047277:CDS |
GGCCTACTTCGGACTTTAAG+TGG | 0.458978 | 2.1:+64089970 | MS.gene047277:CDS |
ATGTCGTATGTTTGAGAACC+GGG | 0.461344 | 2.1:+64090565 | MS.gene047277:CDS |
ACAAAATAAGAAATCGGATA+AGG | 0.469178 | 2.1:+64088502 | MS.gene047277:CDS |
GAAGTGATGGGTCAAGGAGT+TGG | 0.484292 | 2.1:+64088863 | MS.gene047277:CDS |
CTCCTCATAATAGTATTTGA+AGG | 0.485089 | 2.1:-64090318 | None:intergenic |
TTACAACCAACCCTTTCCTC+TGG | 0.485330 | 2.1:-64088647 | None:intergenic |
TTTAATTATGCATATAACAC+TGG | 0.485542 | 2.1:+64088440 | MS.gene047277:CDS |
TCTAATGACAACTCGTCAAA+AGG | 0.488137 | 2.1:+64088931 | MS.gene047277:CDS |
CTCAAGTAGCACAAATGCTC+TGG | 0.489977 | 2.1:-64088758 | None:intergenic |
CAATTCACAAAATAAGAAAT+CGG | 0.490263 | 2.1:+64088496 | MS.gene047277:CDS |
TATGAGGAGGACACAACAAA+AGG | 0.490908 | 2.1:+64090332 | MS.gene047277:CDS |
ATGATTGTCAAAACCAAGAA+AGG | 0.491378 | 2.1:-64089607 | None:intergenic |
CTGTCTATGAACCATCTGTT+GGG | 0.491412 | 2.1:+64090957 | MS.gene047277:CDS |
ATCAGATTTCGACTACAATT+GGG | 0.491708 | 2.1:+64089917 | MS.gene047277:CDS |
CGTCAAAAGGAGATGGTGGC+TGG | 0.492100 | 2.1:+64088944 | MS.gene047277:CDS |
ACATTATGGTTCAGAGAATG+AGG | 0.494022 | 2.1:+64090156 | MS.gene047277:CDS |
GACCGCATAAGCTGACTGTT+GGG | 0.496307 | 2.1:-64090236 | None:intergenic |
GAGAACATCTTATGAAGTGA+TGG | 0.499875 | 2.1:+64088850 | MS.gene047277:CDS |
TGTCTTCTGCAGCATCAACT+TGG | 0.502977 | 2.1:-64089036 | None:intergenic |
AAATGCTCTGGTTTATGTAA+TGG | 0.504865 | 2.1:-64088746 | None:intergenic |
CTCATTCAAATCGTATGCAT+TGG | 0.507227 | 2.1:+64090003 | MS.gene047277:CDS |
ATCATAATCGACTTGATGAA+AGG | 0.507955 | 2.1:+64090501 | MS.gene047277:CDS |
TTTAAGTCCGAAAATCGAAA+AGG | 0.508080 | 2.1:-64088902 | None:intergenic |
GAGGGATAATCATGCTGAGT+TGG | 0.508852 | 2.1:+64090175 | MS.gene047277:CDS |
ATTGGTCTTCAGTTTGGGTG+AGG | 0.509410 | 2.1:+64090021 | MS.gene047277:CDS |
TGTCTATAAGATATATAAGT+GGG | 0.514682 | 2.1:+64088706 | MS.gene047277:CDS |
GATCTTCAAACCTTGGGGAA+AGG | 0.519004 | 2.1:-64090481 | None:intergenic |
TAAAGAATCGAACAAGTGAA+TGG | 0.519618 | 2.1:-64090124 | None:intergenic |
TCATAATCGACTTGATGAAA+GGG | 0.526860 | 2.1:+64090502 | MS.gene047277:CDS |
CATAATAGTATTTGAAGGAA+AGG | 0.529686 | 2.1:-64090313 | None:intergenic |
ACTTCAACAACGCACTAGCC+TGG | 0.534735 | 2.1:-64089752 | None:intergenic |
TAACAAAGAAGGTTTCAAGA+AGG | 0.538422 | 2.1:+64088547 | MS.gene047277:CDS |
AATCGAACAAGTGAATGGTC+TGG | 0.540971 | 2.1:-64090119 | None:intergenic |
ATGAGGAGGACACAACAAAA+GGG | 0.542065 | 2.1:+64090333 | MS.gene047277:CDS |
AACAAAGAAGGTTTCAAGAA+GGG | 0.545537 | 2.1:+64088548 | MS.gene047277:CDS |
CATTTAGTGATAAAGAATCA+TGG | 0.546005 | 2.1:+64088372 | MS.gene047277:CDS |
CTGAAATCCACCATGAATGT+TGG | 0.557140 | 2.1:+64090722 | MS.gene047277:CDS |
TACATGTGTTTGCGCAGATG+CGG | 0.559018 | 2.1:+64090808 | MS.gene047277:CDS |
AATGAAGCTCTCTCGAAACC+AGG | 0.565261 | 2.1:+64088998 | MS.gene047277:CDS |
GCTGTCTATGAACCATCTGT+TGG | 0.568181 | 2.1:+64090956 | MS.gene047277:CDS |
GTGATGGGTCAAGGAGTTGG+AGG | 0.568802 | 2.1:+64088866 | MS.gene047277:CDS |
ATGTCTATAAGATATATAAG+TGG | 0.572287 | 2.1:+64088705 | MS.gene047277:CDS |
GGACCGCATAAGCTGACTGT+TGG | 0.579264 | 2.1:-64090237 | None:intergenic |
TTTGGTGCAGTCCCAACAGA+TGG | 0.581566 | 2.1:-64090968 | None:intergenic |
ATGTGTTTGCGCAGATGCGG+AGG | 0.585249 | 2.1:+64090811 | MS.gene047277:CDS |
TGGTGTATACTTGTTTACTA+CGG | 0.585960 | 2.1:-64090258 | None:intergenic |
ATATTAACTTCATCTGAGAG+TGG | 0.588105 | 2.1:+64088296 | MS.gene047277:CDS |
TCTTATGAAGTGATGGGTCA+AGG | 0.589029 | 2.1:+64088857 | MS.gene047277:CDS |
TCAACGGTGTTCTTGAGGCA+GGG | 0.590097 | 2.1:+64090849 | MS.gene047277:CDS |
ATTTCTCAACGGTGTTCTTG+AGG | 0.591378 | 2.1:+64090844 | MS.gene047277:CDS |
TTGAAGAAAACCTTTCCCCA+AGG | 0.594796 | 2.1:+64090471 | MS.gene047277:CDS |
TGAAGACTTAGAAGGCGTAA+CGG | 0.598405 | 2.1:-64090924 | None:intergenic |
GACAACTCGTCAAAAGGAGA+TGG | 0.599038 | 2.1:+64088937 | MS.gene047277:CDS |
TTGATATCGTTGTGCTTGAG+TGG | 0.601464 | 2.1:-64090756 | None:intergenic |
AGAACATCTTATGAAGTGAT+GGG | 0.601988 | 2.1:+64088851 | MS.gene047277:CDS |
AACTCGTCAAAAGGAGATGG+TGG | 0.603142 | 2.1:+64088940 | MS.gene047277:CDS |
ATCCCAACAGTCAGCTTATG+CGG | 0.606153 | 2.1:+64090234 | MS.gene047277:CDS |
CTTCAAATACTATTATGAGG+AGG | 0.607664 | 2.1:+64090319 | MS.gene047277:CDS |
AGAACTGGACTGTCACATGT+TGG | 0.620791 | 2.1:-64088596 | None:intergenic |
AGCCACTTAAAGTCCGAAGT+AGG | 0.621799 | 2.1:-64089972 | None:intergenic |
GGGTCAAGGAGTTGGAGGCA+CGG | 0.621882 | 2.1:+64088871 | MS.gene047277:CDS |
ATTATGATCTTCAAACCTTG+GGG | 0.630358 | 2.1:-64090486 | None:intergenic |
GGTCTTTGCTCATGGCACAT+GGG | 0.639768 | 2.1:+64089807 | MS.gene047277:CDS |
TTTAGTGCCAACATTCATGG+TGG | 0.641441 | 2.1:-64090729 | None:intergenic |
CATTATGGTTCAGAGAATGA+GGG | 0.643278 | 2.1:+64090157 | MS.gene047277:CDS |
GATTTCAGCTTATCGACAGA+CGG | 0.644926 | 2.1:-64090707 | None:intergenic |
TGAATAAATGAAAAGCAAGA+TGG | 0.655697 | 2.1:-64090278 | None:intergenic |
GCATCTGAAATATTTCTCAA+CGG | 0.661104 | 2.1:+64090833 | MS.gene047277:CDS |
CATGTCGACATAAGAAACCC+CGG | 0.663279 | 2.1:-64090583 | None:intergenic |
TGTCGTATGTTTGAGAACCG+GGG | 0.673760 | 2.1:+64090566 | MS.gene047277:CDS |
ATGTTGATAATGATAATGAG+AGG | 0.683310 | 2.1:+64090417 | MS.gene047277:CDS |
TCAAACCATATACACAGACC+AGG | 0.683597 | 2.1:+64089734 | MS.gene047277:CDS |
TGTTGATAATGATAATGAGA+GGG | 0.689129 | 2.1:+64090418 | MS.gene047277:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATGTCTATAAGATATATAAG+TGG | + | chr2.1:64088705-64088724 | MS.gene047277:CDS | 20.0% |
!! | CAATTCACAAAATAAGAAAT+CGG | + | chr2.1:64088496-64088515 | MS.gene047277:CDS | 20.0% |
!! | TGTCTATAAGATATATAAGT+GGG | + | chr2.1:64088706-64088725 | MS.gene047277:CDS | 20.0% |
!! | TTTAATTATGCATATAACAC+TGG | + | chr2.1:64088440-64088459 | MS.gene047277:CDS | 20.0% |
!!! | AATTTAATGTTCTGGTTTAT+GGG | + | chr2.1:64089323-64089342 | MS.gene047277:intron | 20.0% |
!!! | ATGATGAAAAACTGTTTTAA+TGG | + | chr2.1:64089945-64089964 | MS.gene047277:CDS | 20.0% |
!!! | TGAATGTTTATATTGATTGA+AGG | + | chr2.1:64089295-64089314 | MS.gene047277:intron | 20.0% |
! | AAAACACCTTGAAAAACATT+CGG | - | chr2.1:64089783-64089802 | None:intergenic | 25.0% |
! | ACAAAATAAGAAATCGGATA+AGG | + | chr2.1:64088502-64088521 | MS.gene047277:CDS | 25.0% |
! | ACCGAACAAACAATAAATAT+CGG | + | chr2.1:64089140-64089159 | MS.gene047277:CDS | 25.0% |
! | AGTACAAAATACTAACCTAA+TGG | - | chr2.1:64089166-64089185 | None:intergenic | 25.0% |
! | CATAATAGTATTTGAAGGAA+AGG | - | chr2.1:64090316-64090335 | None:intergenic | 25.0% |
! | CATTTAGTGATAAAGAATCA+TGG | + | chr2.1:64088372-64088391 | MS.gene047277:CDS | 25.0% |
! | CTTTAGTCATTTCAACATTA+TGG | + | chr2.1:64090142-64090161 | MS.gene047277:CDS | 25.0% |
! | TGAAATTTGAATGAATGTTC+TGG | + | chr2.1:64089213-64089232 | MS.gene047277:intron | 25.0% |
! | TGAATAAATGAAAAGCAAGA+TGG | - | chr2.1:64090281-64090300 | None:intergenic | 25.0% |
! | TTCCTTCAAATACTATTATG+AGG | + | chr2.1:64090316-64090335 | MS.gene047277:CDS | 25.0% |
! | TTTCGATGAGTTAACTAATT+TGG | + | chr2.1:64089875-64089894 | MS.gene047277:CDS | 25.0% |
!! | AGGTTTAGAATTTAATGTTC+TGG | + | chr2.1:64089315-64089334 | MS.gene047277:intron | 25.0% |
!! | TGTTGTATTTTGTTCTGATT+TGG | + | chr2.1:64089571-64089590 | MS.gene047277:intron | 25.0% |
!!! | ATGTTGATAATGATAATGAG+AGG | + | chr2.1:64090417-64090436 | MS.gene047277:CDS | 25.0% |
!!! | CTTATTTTGTGAATTGTTCT+TGG | - | chr2.1:64088492-64088511 | None:intergenic | 25.0% |
!!! | GAATTTAATGTTCTGGTTTA+TGG | + | chr2.1:64089322-64089341 | MS.gene047277:intron | 25.0% |
!!! | GCTTTAATAAATTCTAAAGC+TGG | + | chr2.1:64088818-64088837 | MS.gene047277:CDS | 25.0% |
!!! | TGAAAAACTGTTTTAATGGA+AGG | + | chr2.1:64089949-64089968 | MS.gene047277:CDS | 25.0% |
!!! | TGTTGATAATGATAATGAGA+GGG | + | chr2.1:64090418-64090437 | MS.gene047277:CDS | 25.0% |
AAACACATATGATCTTTCCA+TGG | - | chr2.1:64089386-64089405 | None:intergenic | 30.0% | |
AACAAAGAAGGTTTCAAGAA+GGG | + | chr2.1:64088548-64088567 | MS.gene047277:CDS | 30.0% | |
AACAATAAATATCGGCCATT+AGG | + | chr2.1:64089148-64089167 | MS.gene047277:CDS | 30.0% | |
AAGAAAGACCAAATCCAATT+AGG | + | chr2.1:64090996-64091015 | MS.gene047277:CDS | 30.0% | |
AATCAGATTTCGACTACAAT+TGG | + | chr2.1:64089916-64089935 | MS.gene047277:CDS | 30.0% | |
AGAACATCTTATGAAGTGAT+GGG | + | chr2.1:64088851-64088870 | MS.gene047277:CDS | 30.0% | |
ATATTAACTTCATCTGAGAG+TGG | + | chr2.1:64088296-64088315 | MS.gene047277:CDS | 30.0% | |
ATCAGATTTCGACTACAATT+GGG | + | chr2.1:64089917-64089936 | MS.gene047277:CDS | 30.0% | |
ATGATTGTCAAAACCAAGAA+AGG | - | chr2.1:64089610-64089629 | None:intergenic | 30.0% | |
ATTATGATCTTCAAACCTTG+GGG | - | chr2.1:64090489-64090508 | None:intergenic | 30.0% | |
CAACAAGATTATGCTCTATT+TGG | + | chr2.1:64089091-64089110 | MS.gene047277:CDS | 30.0% | |
CTCCTCATAATAGTATTTGA+AGG | - | chr2.1:64090321-64090340 | None:intergenic | 30.0% | |
CTGGTATATGTGTGTTAATT+TGG | + | chr2.1:64089252-64089271 | MS.gene047277:intron | 30.0% | |
CTTCAAATACTATTATGAGG+AGG | + | chr2.1:64090319-64090338 | MS.gene047277:CDS | 30.0% | |
GAGAATGCAAAGAAAAATCT+CGG | + | chr2.1:64089831-64089850 | MS.gene047277:CDS | 30.0% | |
GATTATGATCTTCAAACCTT+GGG | - | chr2.1:64090490-64090509 | None:intergenic | 30.0% | |
GCCGATATTTATTGTTTGTT+CGG | - | chr2.1:64089144-64089163 | None:intergenic | 30.0% | |
TAAAGAAAAACCAGAGGAAA+GGG | + | chr2.1:64088637-64088656 | MS.gene047277:CDS | 30.0% | |
TAAAGAATCATGGAAGTCTT+TGG | + | chr2.1:64088382-64088401 | MS.gene047277:CDS | 30.0% | |
TAAAGAATCGAACAAGTGAA+TGG | - | chr2.1:64090127-64090146 | None:intergenic | 30.0% | |
TAACAAAGAAGGTTTCAAGA+AGG | + | chr2.1:64088547-64088566 | MS.gene047277:CDS | 30.0% | |
TGGATATCATAGTAAAAACC+TGG | - | chr2.1:64089019-64089038 | None:intergenic | 30.0% | |
TGGTGTATACTTGTTTACTA+CGG | - | chr2.1:64090261-64090280 | None:intergenic | 30.0% | |
TTCTTTGACCTAATTGGATT+TGG | - | chr2.1:64091007-64091026 | None:intergenic | 30.0% | |
TTTAAGTCCGAAAATCGAAA+AGG | - | chr2.1:64088905-64088924 | None:intergenic | 30.0% | |
TTTCTATTTACACAGCACAA+TGG | + | chr2.1:64089530-64089549 | MS.gene047277:intron | 30.0% | |
! | AAATGCTCTGGTTTATGTAA+TGG | - | chr2.1:64088749-64088768 | None:intergenic | 30.0% |
! | AGCTGGAATATATTTGAAGT+TGG | + | chr2.1:64088670-64088689 | MS.gene047277:CDS | 30.0% |
! | CAAAGTTTTCACAATTGAGA+AGG | + | chr2.1:64090376-64090395 | MS.gene047277:CDS | 30.0% |
! | GAATCTTCCTTTTCGATTTT+CGG | + | chr2.1:64088895-64088914 | MS.gene047277:CDS | 30.0% |
! | GCATCTGAAATATTTCTCAA+CGG | + | chr2.1:64090833-64090852 | MS.gene047277:CDS | 30.0% |
! | TATGGTTTGAGGTTTCTTAT+TGG | - | chr2.1:64089724-64089743 | None:intergenic | 30.0% |
! | TCAATTCCGAATGTTTTTCA+AGG | + | chr2.1:64089774-64089793 | MS.gene047277:CDS | 30.0% |
! | TGAGGCTTTAACAATTTAAG+CGG | + | chr2.1:64091105-64091124 | MS.gene047277:intron | 30.0% |
! | TTTGGTCTTTCTTTGAACTT+TGG | - | chr2.1:64090989-64091008 | None:intergenic | 30.0% |
!! | ACATGTTTTCAAGATTTTGG+AGG | + | chr2.1:64090601-64090620 | MS.gene047277:CDS | 30.0% |
!! | ATCATAATCGACTTGATGAA+AGG | + | chr2.1:64090501-64090520 | MS.gene047277:CDS | 30.0% |
!! | ATGTTCTGGTTTAGAATTGA+AGG | + | chr2.1:64089227-64089246 | MS.gene047277:intron | 30.0% |
!! | GAGGAGTTTCTTATTTCTAA+AGG | + | chr2.1:64090881-64090900 | MS.gene047277:CDS | 30.0% |
!! | TCATAATCGACTTGATGAAA+GGG | + | chr2.1:64090502-64090521 | MS.gene047277:CDS | 30.0% |
!! | TCGACATGTTTTCAAGATTT+TGG | + | chr2.1:64090598-64090617 | MS.gene047277:CDS | 30.0% |
!!! | AAGACATAGCCAGTATTTTT+TGG | + | chr2.1:64089053-64089072 | MS.gene047277:CDS | 30.0% |
!!! | AGACATAGCCAGTATTTTTT+GGG | + | chr2.1:64089054-64089073 | MS.gene047277:CDS | 30.0% |
!!! | CTGCACAATATGTTTTAAAG+CGG | + | chr2.1:64090666-64090685 | MS.gene047277:CDS | 30.0% |
!!! | GTTTTTCAAGGTGTTTTTCA+TGG | + | chr2.1:64089786-64089805 | MS.gene047277:CDS | 30.0% |
ACATTATGGTTCAGAGAATG+AGG | + | chr2.1:64090156-64090175 | MS.gene047277:CDS | 35.0% | |
ATAACACTGGATTCTCTGTT+AGG | + | chr2.1:64088453-64088472 | MS.gene047277:CDS | 35.0% | |
CATAAATTCCAAGGCAAGAT+AGG | - | chr2.1:64089353-64089372 | None:intergenic | 35.0% | |
CATTATGGTTCAGAGAATGA+GGG | + | chr2.1:64090157-64090176 | MS.gene047277:CDS | 35.0% | |
CGAGAAGTAAATGAAGTTCA+AGG | + | chr2.1:64088788-64088807 | MS.gene047277:CDS | 35.0% | |
CGATTATGATCTTCAAACCT+TGG | - | chr2.1:64090491-64090510 | None:intergenic | 35.0% | |
CGTTATGCTTGTAACAAAGA+AGG | + | chr2.1:64088536-64088555 | MS.gene047277:CDS | 35.0% | |
CTAAAGAAAAACCAGAGGAA+AGG | + | chr2.1:64088636-64088655 | MS.gene047277:CDS | 35.0% | |
CTCATTCAAATCGTATGCAT+TGG | + | chr2.1:64090003-64090022 | MS.gene047277:CDS | 35.0% | |
GAAAGCTAAAGAAAAACCAG+AGG | + | chr2.1:64088631-64088650 | MS.gene047277:CDS | 35.0% | |
GAAGCAAAAGAAAGATGATG+AGG | + | chr2.1:64091087-64091106 | MS.gene047277:intron | 35.0% | |
GACAGAAATTCCTTATAGCT+CGG | + | chr2.1:64091062-64091081 | MS.gene047277:intron | 35.0% | |
GAGAACATCTTATGAAGTGA+TGG | + | chr2.1:64088850-64088869 | MS.gene047277:CDS | 35.0% | |
GTCTGCTTAATCCTAAAAAC+AGG | + | chr2.1:64088573-64088592 | MS.gene047277:CDS | 35.0% | |
TCTAATGACAACTCGTCAAA+AGG | + | chr2.1:64088931-64088950 | MS.gene047277:CDS | 35.0% | |
TGTACAGAGCATAAATTCCA+AGG | - | chr2.1:64089362-64089381 | None:intergenic | 35.0% | |
TTCTCATACTCAACAAGAAC+TGG | - | chr2.1:64088614-64088633 | None:intergenic | 35.0% | |
! | CATCGTAAGAGTGTGTTATT+TGG | + | chr2.1:64089627-64089646 | MS.gene047277:CDS | 35.0% |
! | GAGGCTTTAACAATTTAAGC+GGG | + | chr2.1:64091106-64091125 | MS.gene047277:intron | 35.0% |
! | GGTTTCGAATGTTGATGTTT+TGG | + | chr2.1:64090439-64090458 | MS.gene047277:CDS | 35.0% |
! | TCTTTCAATGCTTTTCTTCG+TGG | + | chr2.1:64090086-64090105 | MS.gene047277:CDS | 35.0% |
! | TGGTTTAGAATTGAAGGTTC+TGG | + | chr2.1:64089233-64089252 | MS.gene047277:intron | 35.0% |
! | TTTTAATGGAAGGCCTACTT+CGG | + | chr2.1:64089959-64089978 | MS.gene047277:CDS | 35.0% |
! | TTTTTCATGGTCTTTGCTCA+TGG | + | chr2.1:64089799-64089818 | MS.gene047277:CDS | 35.0% |
!! | ACTGCTTTTGAAGACTTAGA+AGG | - | chr2.1:64090935-64090954 | None:intergenic | 35.0% |
!! | CGCTTTAAAACATATTGTGC+AGG | - | chr2.1:64090668-64090687 | None:intergenic | 35.0% |
!! | TATGCATTGGTCTTCAGTTT+GGG | + | chr2.1:64090016-64090035 | MS.gene047277:CDS | 35.0% |
!! | TTCAAGATTTTGGAGGTCTT+AGG | + | chr2.1:64090608-64090627 | MS.gene047277:CDS | 35.0% |
!!! | AGACATCAGCTACTTTTGAT+TGG | + | chr2.1:64089670-64089689 | MS.gene047277:CDS | 35.0% |
!!! | CACAATATGTTTTAAAGCGG+TGG | + | chr2.1:64090669-64090688 | MS.gene047277:CDS | 35.0% |
AATCGAACAAGTGAATGGTC+TGG | - | chr2.1:64090122-64090141 | None:intergenic | 40.0% | |
ACCTATGATCTTTGCATAGC+TGG | - | chr2.1:64089480-64089499 | None:intergenic | 40.0% | |
AGTCGCTTCTTTGACCTAAT+TGG | - | chr2.1:64091013-64091032 | None:intergenic | 40.0% | |
ATCTGAGAGTGGACAATTGA+CGG | + | chr2.1:64088307-64088326 | MS.gene047277:CDS | 40.0% | |
ATGAGGAGGACACAACAAAA+GGG | + | chr2.1:64090333-64090352 | MS.gene047277:CDS | 40.0% | |
ATGTCGTATGTTTGAGAACC+GGG | + | chr2.1:64090565-64090584 | MS.gene047277:CDS | 40.0% | |
ATTTATGCTCTGTACAGCCA+TGG | + | chr2.1:64089366-64089385 | MS.gene047277:intron | 40.0% | |
ATTTCTCAACGGTGTTCTTG+AGG | + | chr2.1:64090844-64090863 | MS.gene047277:CDS | 40.0% | |
CATGTCGTATGTTTGAGAAC+CGG | + | chr2.1:64090564-64090583 | MS.gene047277:CDS | 40.0% | |
CTGAAATCCACCATGAATGT+TGG | + | chr2.1:64090722-64090741 | MS.gene047277:CDS | 40.0% | |
CTGTCTATGAACCATCTGTT+GGG | + | chr2.1:64090957-64090976 | MS.gene047277:CDS | 40.0% | |
GATTTCAGCTTATCGACAGA+CGG | - | chr2.1:64090710-64090729 | None:intergenic | 40.0% | |
GTCTTTAGTGCCAACATTCA+TGG | - | chr2.1:64090735-64090754 | None:intergenic | 40.0% | |
TATGAGGAGGACACAACAAA+AGG | + | chr2.1:64090332-64090351 | MS.gene047277:CDS | 40.0% | |
TCAAACCATATACACAGACC+AGG | + | chr2.1:64089734-64089753 | MS.gene047277:CDS | 40.0% | |
TCCAGCTATGCAAAGATCAT+AGG | + | chr2.1:64089476-64089495 | MS.gene047277:intron | 40.0% | |
TCCATCTGCCCAAAAAATAC+TGG | - | chr2.1:64089065-64089084 | None:intergenic | 40.0% | |
TGGTCTGTGTATATGGTTTG+AGG | - | chr2.1:64089735-64089754 | None:intergenic | 40.0% | |
TTCATTTCAGCTGCCTTTCT+TGG | + | chr2.1:64089594-64089613 | MS.gene047277:intron | 40.0% | |
TTGAAGAAAACCTTTCCCCA+AGG | + | chr2.1:64090471-64090490 | MS.gene047277:CDS | 40.0% | |
TTGATATCGTTGTGCTTGAG+TGG | - | chr2.1:64090759-64090778 | None:intergenic | 40.0% | |
TTTAGTGCCAACATTCATGG+TGG | - | chr2.1:64090732-64090751 | None:intergenic | 40.0% | |
TTTGCTTCTTCCGAGCTATA+AGG | - | chr2.1:64091075-64091094 | None:intergenic | 40.0% | |
! | TCATGCTGAGTTGGACTTTA+AGG | + | chr2.1:64090184-64090203 | MS.gene047277:CDS | 40.0% |
! | TGAAGACTTAGAAGGCGTAA+CGG | - | chr2.1:64090927-64090946 | None:intergenic | 40.0% |
!! | AAGATTTTGGAGGTCTTAGG+TGG | + | chr2.1:64090611-64090630 | MS.gene047277:CDS | 40.0% |
!! | GTATGCATTGGTCTTCAGTT+TGG | + | chr2.1:64090015-64090034 | MS.gene047277:CDS | 40.0% |
!! | TCACATGTTGGCCTGTTTTT+AGG | - | chr2.1:64088587-64088606 | None:intergenic | 40.0% |
!! | TCTTATGAAGTGATGGGTCA+AGG | + | chr2.1:64088857-64088876 | MS.gene047277:CDS | 40.0% |
AACTCGTCAAAAGGAGATGG+TGG | + | chr2.1:64088940-64088959 | MS.gene047277:CDS | 45.0% | |
AATGAAGCTCTCTCGAAACC+AGG | + | chr2.1:64088998-64089017 | MS.gene047277:CDS | 45.0% | |
AGAACTGGACTGTCACATGT+TGG | - | chr2.1:64088599-64088618 | None:intergenic | 45.0% | |
AGCCACTTAAAGTCCGAAGT+AGG | - | chr2.1:64089975-64089994 | None:intergenic | 45.0% | |
ATCCCAACAGTCAGCTTATG+CGG | + | chr2.1:64090234-64090253 | MS.gene047277:CDS | 45.0% | |
CATGTCGACATAAGAAACCC+CGG | - | chr2.1:64090586-64090605 | None:intergenic | 45.0% | |
CTCAAGTAGCACAAATGCTC+TGG | - | chr2.1:64088761-64088780 | None:intergenic | 45.0% | |
GAAAAACCAGAGGAAAGGGT+TGG | + | chr2.1:64088641-64088660 | MS.gene047277:CDS | 45.0% | |
GACAACTCGTCAAAAGGAGA+TGG | + | chr2.1:64088937-64088956 | MS.gene047277:CDS | 45.0% | |
GAGGGATAATCATGCTGAGT+TGG | + | chr2.1:64090175-64090194 | MS.gene047277:CDS | 45.0% | |
GATCTTCAAACCTTGGGGAA+AGG | - | chr2.1:64090484-64090503 | None:intergenic | 45.0% | |
GCTGTCTATGAACCATCTGT+TGG | + | chr2.1:64090956-64090975 | MS.gene047277:CDS | 45.0% | |
TACATGTGTTTGCGCAGATG+CGG | + | chr2.1:64090808-64090827 | MS.gene047277:CDS | 45.0% | |
TGTCGTATGTTTGAGAACCG+GGG | + | chr2.1:64090566-64090585 | MS.gene047277:CDS | 45.0% | |
TGTCTTCTGCAGCATCAACT+TGG | - | chr2.1:64089039-64089058 | None:intergenic | 45.0% | |
TGTTCTTGAGGCAGGGAAAA+AGG | + | chr2.1:64090856-64090875 | MS.gene047277:CDS | 45.0% | |
TTACAACCAACCCTTTCCTC+TGG | - | chr2.1:64088650-64088669 | None:intergenic | 45.0% | |
! | ACTAGCCTGGTCTGTGTATA+TGG | - | chr2.1:64089742-64089761 | None:intergenic | 45.0% |
! | GTGAGGTCACATTTTACAGC+TGG | + | chr2.1:64090038-64090057 | MS.gene047277:CDS | 45.0% |
!! | ATTGGTCTTCAGTTTGGGTG+AGG | + | chr2.1:64090021-64090040 | MS.gene047277:CDS | 45.0% |
!! | GAAAGGGTTGGTTGTAAAGC+TGG | + | chr2.1:64088653-64088672 | MS.gene047277:CDS | 45.0% |
!!! | GCCAGTATTTTTTGGGCAGA+TGG | + | chr2.1:64089061-64089080 | MS.gene047277:CDS | 45.0% |
ACTTCAACAACGCACTAGCC+TGG | - | chr2.1:64089755-64089774 | None:intergenic | 50.0% | |
GACCGCATAAGCTGACTGTT+GGG | - | chr2.1:64090239-64090258 | None:intergenic | 50.0% | |
GGCCTACTTCGGACTTTAAG+TGG | + | chr2.1:64089970-64089989 | MS.gene047277:CDS | 50.0% | |
GGGTTGTCACAGTCGACATT+AGG | + | chr2.1:64090522-64090541 | MS.gene047277:CDS | 50.0% | |
GGTCTTTGCTCATGGCACAT+GGG | + | chr2.1:64089807-64089826 | MS.gene047277:CDS | 50.0% | |
TCAACGGTGTTCTTGAGGCA+GGG | + | chr2.1:64090849-64090868 | MS.gene047277:CDS | 50.0% | |
TGGGTGATCCTATCTTGCCT+TGG | + | chr2.1:64089342-64089361 | MS.gene047277:intron | 50.0% | |
TGGTCTTTGCTCATGGCACA+TGG | + | chr2.1:64089806-64089825 | MS.gene047277:CDS | 50.0% | |
! | TTTGGTGCAGTCCCAACAGA+TGG | - | chr2.1:64090971-64090990 | None:intergenic | 50.0% |
!! | GAAGTGATGGGTCAAGGAGT+TGG | + | chr2.1:64088863-64088882 | MS.gene047277:CDS | 50.0% |
ATGTGTTTGCGCAGATGCGG+AGG | + | chr2.1:64090811-64090830 | MS.gene047277:CDS | 55.0% | |
CTCAACGGTGTTCTTGAGGC+AGG | + | chr2.1:64090848-64090867 | MS.gene047277:CDS | 55.0% | |
GGACCGCATAAGCTGACTGT+TGG | - | chr2.1:64090240-64090259 | None:intergenic | 55.0% | |
TGAGGCAGGGAAAAAGGCAG+AGG | + | chr2.1:64090862-64090881 | MS.gene047277:CDS | 55.0% | |
! | CGTCAAAAGGAGATGGTGGC+TGG | + | chr2.1:64088944-64088963 | MS.gene047277:CDS | 55.0% |
!! | GTGATGGGTCAAGGAGTTGG+AGG | + | chr2.1:64088866-64088885 | MS.gene047277:CDS | 55.0% |
GGGTCAAGGAGTTGGAGGCA+CGG | + | chr2.1:64088871-64088890 | MS.gene047277:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.1 | gene | 64088287 | 64091134 | 64088287 | ID=MS.gene047277 |
chr2.1 | mRNA | 64088287 | 64091134 | 64088287 | ID=MS.gene047277.t1;Parent=MS.gene047277 |
chr2.1 | exon | 64088287 | 64089169 | 64088287 | ID=MS.gene047277.t1.exon1;Parent=MS.gene047277.t1 |
chr2.1 | CDS | 64088287 | 64089169 | 64088287 | ID=cds.MS.gene047277.t1;Parent=MS.gene047277.t1 |
chr2.1 | exon | 64089604 | 64091017 | 64089604 | ID=MS.gene047277.t1.exon2;Parent=MS.gene047277.t1 |
chr2.1 | CDS | 64089604 | 64091017 | 64089604 | ID=cds.MS.gene047277.t1;Parent=MS.gene047277.t1 |
chr2.1 | exon | 64091125 | 64091134 | 64091125 | ID=MS.gene047277.t1.exon3;Parent=MS.gene047277.t1 |
chr2.1 | CDS | 64091125 | 64091134 | 64091125 | ID=cds.MS.gene047277.t1;Parent=MS.gene047277.t1 |
Gene Sequence |
Protein sequence |