Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene047305.t1 | XP_024631359.1 | 94 | 697 | 40 | 1 | 1 | 697 | 1 | 695 | 0.00E+00 | 1344.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene047305.t1 | Q9LKR4 | 56.7 | 670 | 284 | 3 | 5 | 670 | 8 | 675 | 7.3e-220 | 765.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene047305.t1 | A0A396J3Q9 | 94.0 | 697 | 40 | 1 | 1 | 697 | 1 | 695 | 0.0e+00 | 1344.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene047305.t1 | TF | FAR1 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene047305.t1 | MTR_3g450850 | 45.200 | 250 | 118 | 3 | 54 | 295 | 48 | 286 | 2.44e-63 | 214 |
MS.gene047305.t1 | MTR_4g035820 | 35.816 | 282 | 163 | 6 | 33 | 311 | 58 | 324 | 4.07e-46 | 174 |
MS.gene047305.t1 | MTR_6g051425 | 28.296 | 311 | 197 | 8 | 31 | 336 | 2 | 291 | 3.08e-24 | 105 |
MS.gene047305.t1 | MTR_3g012160 | 44.660 | 103 | 47 | 1 | 194 | 296 | 1 | 93 | 3.52e-23 | 94.7 |
MS.gene047305.t1 | MTR_1g070355 | 28.340 | 247 | 148 | 7 | 59 | 297 | 80 | 305 | 2.32e-19 | 92.8 |
MS.gene047305.t1 | MTR_5g076070 | 24.468 | 282 | 191 | 6 | 22 | 295 | 15 | 282 | 7.35e-17 | 82.0 |
MS.gene047305.t1 | MTR_6g014355 | 38.931 | 131 | 68 | 3 | 126 | 254 | 13 | 133 | 1.25e-16 | 80.5 |
MS.gene047305.t1 | MTR_6g022080 | 30.070 | 143 | 89 | 3 | 65 | 202 | 97 | 233 | 6.91e-12 | 66.6 |
MS.gene047305.t1 | MTR_7g446520 | 24.280 | 243 | 149 | 5 | 59 | 298 | 94 | 304 | 1.37e-11 | 67.0 |
MS.gene047305.t1 | MTR_2g101460 | 38.235 | 102 | 60 | 2 | 65 | 165 | 67 | 166 | 1.67e-11 | 64.7 |
MS.gene047305.t1 | MTR_2g101460 | 38.235 | 102 | 60 | 2 | 65 | 165 | 57 | 156 | 1.82e-11 | 64.3 |
MS.gene047305.t1 | MTR_3g095940 | 51.724 | 58 | 28 | 0 | 499 | 556 | 86 | 143 | 2.97e-11 | 62.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene047305.t1 | AT5G28530 | 56.907 | 666 | 285 | 2 | 5 | 670 | 8 | 671 | 0.0 | 791 |
MS.gene047305.t1 | AT5G28530 | 56.907 | 666 | 285 | 2 | 5 | 670 | 8 | 671 | 0.0 | 791 |
MS.gene047305.t1 | AT5G28530 | 56.716 | 670 | 284 | 3 | 5 | 670 | 8 | 675 | 0.0 | 786 |
MS.gene047305.t1 | AT5G28530 | 50.149 | 670 | 265 | 5 | 5 | 670 | 8 | 612 | 0.0 | 656 |
MS.gene047305.t1 | AT5G28530 | 48.498 | 666 | 278 | 5 | 5 | 670 | 8 | 608 | 0.0 | 634 |
MS.gene047305.t1 | AT1G10240 | 42.556 | 665 | 353 | 8 | 30 | 678 | 24 | 675 | 0.0 | 545 |
MS.gene047305.t1 | AT1G10240 | 42.556 | 665 | 353 | 8 | 30 | 678 | 24 | 675 | 0.0 | 545 |
MS.gene047305.t1 | AT4G38180 | 30.743 | 592 | 380 | 12 | 51 | 627 | 71 | 647 | 2.52e-70 | 244 |
MS.gene047305.t1 | AT4G15090 | 26.553 | 644 | 422 | 15 | 51 | 670 | 49 | 665 | 2.52e-62 | 223 |
MS.gene047305.t1 | AT4G15090 | 26.553 | 644 | 422 | 15 | 51 | 670 | 49 | 665 | 2.52e-62 | 223 |
MS.gene047305.t1 | AT4G15090 | 26.553 | 644 | 422 | 15 | 51 | 670 | 49 | 665 | 2.52e-62 | 223 |
MS.gene047305.t1 | AT4G15090 | 26.553 | 644 | 422 | 15 | 51 | 670 | 49 | 665 | 2.52e-62 | 223 |
MS.gene047305.t1 | AT4G15090 | 26.553 | 644 | 422 | 15 | 51 | 670 | 49 | 665 | 2.52e-62 | 223 |
MS.gene047305.t1 | AT2G27110 | 27.023 | 618 | 377 | 18 | 30 | 622 | 19 | 587 | 8.52e-56 | 205 |
MS.gene047305.t1 | AT2G27110 | 27.023 | 618 | 377 | 18 | 30 | 622 | 19 | 587 | 8.52e-56 | 205 |
MS.gene047305.t1 | AT3G06250 | 26.504 | 615 | 355 | 18 | 27 | 612 | 155 | 701 | 3.64e-50 | 187 |
MS.gene047305.t1 | AT3G06250 | 26.504 | 615 | 355 | 18 | 27 | 612 | 155 | 701 | 3.64e-50 | 187 |
MS.gene047305.t1 | AT3G06250 | 26.504 | 615 | 355 | 18 | 27 | 612 | 155 | 701 | 3.64e-50 | 187 |
MS.gene047305.t1 | AT3G22170 | 24.959 | 617 | 385 | 17 | 28 | 613 | 47 | 616 | 1.26e-49 | 187 |
MS.gene047305.t1 | AT3G22170 | 24.959 | 617 | 385 | 17 | 28 | 613 | 47 | 616 | 1.26e-49 | 187 |
MS.gene047305.t1 | AT2G27110 | 30.467 | 407 | 258 | 10 | 234 | 622 | 43 | 442 | 3.51e-49 | 184 |
MS.gene047305.t1 | AT1G76320 | 26.285 | 681 | 420 | 23 | 57 | 696 | 1 | 640 | 6.77e-49 | 182 |
MS.gene047305.t1 | AT5G18960 | 27.130 | 575 | 344 | 16 | 53 | 612 | 211 | 725 | 7.33e-49 | 184 |
MS.gene047305.t1 | AT5G18960 | 27.130 | 575 | 344 | 16 | 53 | 612 | 211 | 725 | 7.33e-49 | 184 |
MS.gene047305.t1 | AT1G76320 | 26.220 | 656 | 407 | 21 | 57 | 679 | 1 | 612 | 1.91e-48 | 182 |
MS.gene047305.t1 | AT1G76320 | 26.220 | 656 | 407 | 21 | 57 | 679 | 1 | 612 | 1.91e-48 | 182 |
MS.gene047305.t1 | AT1G76320 | 26.220 | 656 | 407 | 21 | 57 | 679 | 1 | 612 | 2.04e-48 | 182 |
MS.gene047305.t1 | AT1G52520 | 24.884 | 647 | 421 | 22 | 52 | 668 | 84 | 695 | 2.63e-42 | 164 |
MS.gene047305.t1 | AT1G80010 | 23.767 | 669 | 437 | 19 | 28 | 657 | 72 | 706 | 1.20e-39 | 156 |
MS.gene047305.t1 | AT2G32250 | 25.393 | 445 | 311 | 10 | 258 | 685 | 187 | 627 | 7.13e-39 | 154 |
MS.gene047305.t1 | AT2G32250 | 25.393 | 445 | 311 | 10 | 258 | 685 | 146 | 586 | 8.72e-39 | 154 |
MS.gene047305.t1 | AT2G32250 | 25.393 | 445 | 311 | 10 | 258 | 685 | 146 | 586 | 1.02e-38 | 154 |
MS.gene047305.t1 | AT4G19990 | 24.631 | 609 | 374 | 14 | 56 | 632 | 24 | 579 | 1.08e-38 | 153 |
MS.gene047305.t1 | AT4G19990 | 24.631 | 609 | 374 | 14 | 56 | 632 | 24 | 579 | 1.08e-38 | 153 |
MS.gene047305.t1 | AT2G32250 | 25.393 | 445 | 311 | 10 | 258 | 685 | 187 | 627 | 1.11e-38 | 154 |
MS.gene047305.t1 | AT2G32250 | 25.393 | 445 | 311 | 10 | 258 | 685 | 187 | 627 | 1.11e-38 | 154 |
MS.gene047305.t1 | AT2G32250 | 25.393 | 445 | 311 | 10 | 258 | 685 | 187 | 627 | 1.16e-38 | 154 |
MS.gene047305.t1 | AT2G32250 | 25.393 | 445 | 311 | 10 | 258 | 685 | 187 | 627 | 1.16e-38 | 154 |
MS.gene047305.t1 | AT2G32250 | 25.393 | 445 | 311 | 10 | 258 | 685 | 187 | 627 | 1.16e-38 | 154 |
MS.gene047305.t1 | AT4G19990 | 24.631 | 609 | 374 | 14 | 56 | 632 | 24 | 579 | 1.26e-38 | 153 |
MS.gene047305.t1 | AT4G19990 | 24.631 | 609 | 374 | 14 | 56 | 632 | 38 | 593 | 1.34e-38 | 153 |
MS.gene047305.t1 | AT4G19990 | 24.631 | 609 | 374 | 14 | 56 | 632 | 24 | 579 | 2.01e-38 | 153 |
MS.gene047305.t1 | AT4G19990 | 24.631 | 609 | 374 | 14 | 56 | 632 | 24 | 579 | 2.01e-38 | 153 |
MS.gene047305.t1 | AT4G19990 | 24.294 | 531 | 334 | 11 | 119 | 632 | 43 | 522 | 3.48e-34 | 139 |
MS.gene047305.t1 | AT4G38170 | 26.446 | 363 | 254 | 6 | 272 | 622 | 45 | 406 | 9.60e-34 | 136 |
Find 133 sgRNAs with CRISPR-Local
Find 189 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGCCAAATGGTTTCTGATTT+TGG | 0.102866 | 2.1:+63727492 | MS.gene047305:CDS |
CAGAGGAATTTGAACTTAAA+TGG | 0.181226 | 2.1:+63727469 | MS.gene047305:CDS |
TTATCTGCTTTCACCGATTC+TGG | 0.206477 | 2.1:-63726252 | None:intergenic |
TCTTATCGATCGATCACTTA+TGG | 0.237164 | 2.1:+63727032 | MS.gene047305:CDS |
AGGTGGACATTTGTCTTTCT+TGG | 0.238238 | 2.1:+63726758 | MS.gene047305:CDS |
CCATTTGCCTTCCTCTTAAC+CGG | 0.251085 | 2.1:-63726465 | None:intergenic |
AAGCCTTCAAACTAGCTATT+TGG | 0.254902 | 2.1:-63728748 | None:intergenic |
CGTGCATAATCACGAGCTTT+TGG | 0.255977 | 2.1:+63726599 | MS.gene047305:CDS |
TGTATTCAGTTCGAGCATAT+TGG | 0.297881 | 2.1:+63727544 | MS.gene047305:CDS |
ACCTGCTTATCGGAAGATTC+AGG | 0.316823 | 2.1:+63726644 | MS.gene047305:CDS |
GAAAAGGGAAAATGATGTTT+TGG | 0.322914 | 2.1:+63726851 | MS.gene047305:CDS |
GTATTCAGTTCGAGCATATT+GGG | 0.339529 | 2.1:+63727545 | MS.gene047305:CDS |
GCTTTCGAAAGCTGGGTTTC+CGG | 0.342293 | 2.1:+63726692 | MS.gene047305:CDS |
ATACTCTTGCTTTCGAAAGC+TGG | 0.354980 | 2.1:+63726684 | MS.gene047305:CDS |
AAATCGAAAGAAGGTTATTC+AGG | 0.356354 | 2.1:+63726806 | MS.gene047305:CDS |
TTCTTTCATCAGTTCTTTGC+GGG | 0.358476 | 2.1:-63728635 | None:intergenic |
ATTGAATGTGGATTTAAATT+CGG | 0.362006 | 2.1:-63727424 | None:intergenic |
TGCAAGGAATTTGAATCATC+GGG | 0.363156 | 2.1:+63728391 | MS.gene047305:CDS |
TACCAAACCACACTCCAAAA+AGG | 0.366681 | 2.1:-63727058 | None:intergenic |
CTCAGGAAATTCACTTCTAA+TGG | 0.369848 | 2.1:-63727322 | None:intergenic |
AACAATGTCCTTGTGGAGAT+TGG | 0.375018 | 2.1:+63726178 | MS.gene047305:CDS |
TTAAACACCATTCCAACATA+AGG | 0.399971 | 2.1:-63726303 | None:intergenic |
TCTAGAATTAGCCCTCAATT+AGG | 0.402768 | 2.1:+63726399 | MS.gene047305:CDS |
GATGATTCTGATGAAGGTTC+TGG | 0.406482 | 2.1:+63726225 | MS.gene047305:CDS |
AGGCATTGCTTAATGAGAAA+AGG | 0.415782 | 2.1:+63726835 | MS.gene047305:CDS |
GTCATCATCTGCTTCTTTCG+CGG | 0.417036 | 2.1:-63726895 | None:intergenic |
TCTAATGGCATCTTTAAGTC+CGG | 0.417527 | 2.1:-63727307 | None:intergenic |
TAAACACCATTCCAACATAA+GGG | 0.418566 | 2.1:-63726302 | None:intergenic |
CCGGGTTTGCCCCGGTTAAG+AGG | 0.420690 | 2.1:+63726454 | MS.gene047305:CDS |
GAAAATATAGCTTGGTCATA+TGG | 0.423296 | 2.1:+63726957 | MS.gene047305:CDS |
CCACGTTTAAAGATCGTTCT+CGG | 0.425296 | 2.1:-63728498 | None:intergenic |
GACATCTTCCTTTCATGAAC+CGG | 0.427391 | 2.1:-63727257 | None:intergenic |
GAAAATGCTTGAGCTTGAAA+AGG | 0.428355 | 2.1:+63726728 | MS.gene047305:CDS |
GTCCAAAATCAGAAACCATT+TGG | 0.428679 | 2.1:-63727494 | None:intergenic |
ATTTCTCAGCAATAAAACTT+TGG | 0.431448 | 2.1:-63728537 | None:intergenic |
CGGTTAAGAGGAAGGCAAAT+GGG | 0.435855 | 2.1:+63726466 | MS.gene047305:CDS |
TGCTAAAATGTATCTGTCTA+AGG | 0.437024 | 2.1:+63726530 | MS.gene047305:CDS |
ACAAATACTACTTAAGTAGA+TGG | 0.437071 | 2.1:+63728473 | MS.gene047305:CDS |
TACTCTTGCTTTCGAAAGCT+GGG | 0.437822 | 2.1:+63726685 | MS.gene047305:CDS |
ATGGAGAGCGACACGTGTTA+TGG | 0.440990 | 2.1:+63728338 | MS.gene047305:CDS |
GTTAATAAGAATGTCGTGTT+TGG | 0.444083 | 2.1:+63726987 | MS.gene047305:CDS |
GAGCTTGAAAAGGGAATTCA+AGG | 0.444538 | 2.1:+63726738 | MS.gene047305:CDS |
CGATGCTTTGCAGCAAGAGT+TGG | 0.446058 | 2.1:+63728243 | MS.gene047305:CDS |
CTACTTAAGTAGTATTTGTC+GGG | 0.448293 | 2.1:-63728469 | None:intergenic |
CATTTGCCTTCCTCTTAACC+GGG | 0.453188 | 2.1:-63726464 | None:intergenic |
CTTCAAAAGACGTATGGATT+CGG | 0.455725 | 2.1:+63726151 | MS.gene047305:CDS |
ACATTTGTCTTTCTTGGAAA+GGG | 0.456261 | 2.1:+63726764 | MS.gene047305:CDS |
CGTGTTATGGCTACCAGAAA+AGG | 0.458295 | 2.1:+63728351 | MS.gene047305:CDS |
CAATATACAAATCTTAGAAC+TGG | 0.459994 | 2.1:+63728172 | MS.gene047305:CDS |
CTCCGCGCATGCTCTTCAAT+TGG | 0.460247 | 2.1:-63728199 | None:intergenic |
AACCTTCTCATTCTCATCCA+TGG | 0.461287 | 2.1:-63726934 | None:intergenic |
GTTCTTTCATCAGTTCTTTG+CGG | 0.462201 | 2.1:-63728636 | None:intergenic |
CTAATGGCATCTTTAAGTCC+GGG | 0.464686 | 2.1:-63727306 | None:intergenic |
CCTTGATGCAGGTGTTTCTC+CGG | 0.465256 | 2.1:+63727238 | MS.gene047305:intron |
TTCTAAACAAGGTATCTAGT+TGG | 0.469074 | 2.1:+63727373 | MS.gene047305:CDS |
ATGGGGAGCATCATAGAGAT+AGG | 0.469186 | 2.1:+63726484 | MS.gene047305:CDS |
TCCTGAATCTTCCGATAAGC+AGG | 0.470635 | 2.1:-63726645 | None:intergenic |
GGCATTGCTTAATGAGAAAA+GGG | 0.476407 | 2.1:+63726836 | MS.gene047305:CDS |
TTATCGATCCGGGTTTGCCC+CGG | 0.478798 | 2.1:+63726446 | MS.gene047305:CDS |
CTGTCTAAGGAGGTTGTTGA+CGG | 0.480756 | 2.1:+63726543 | MS.gene047305:CDS |
AATATCATTACCCCTTATGT+TGG | 0.483803 | 2.1:+63726291 | MS.gene047305:CDS |
CCTCTTAACCGGGGCAAACC+CGG | 0.485059 | 2.1:-63726454 | None:intergenic |
CCGGTTAAGAGGAAGGCAAA+TGG | 0.486458 | 2.1:+63726465 | MS.gene047305:CDS |
TCTACTTAAGTAGTATTTGT+CGG | 0.487675 | 2.1:-63728470 | None:intergenic |
GACATTTGTCTTTCTTGGAA+AGG | 0.490686 | 2.1:+63726763 | MS.gene047305:CDS |
TGTCTAAGGAGGTTGTTGAC+GGG | 0.496899 | 2.1:+63726544 | MS.gene047305:CDS |
TGAGACTAAACACGTCATTC+CGG | 0.497303 | 2.1:+63727341 | MS.gene047305:CDS |
TCTAGATCTTGCTTTCCTCA+TGG | 0.497710 | 2.1:-63726382 | None:intergenic |
CGCTTGTAAACGCCTAATTG+AGG | 0.499806 | 2.1:-63726411 | None:intergenic |
TTGCAAGGAATTTGAATCAT+CGG | 0.500581 | 2.1:+63728390 | MS.gene047305:CDS |
TGAACTTAAATGGAGCCAAA+TGG | 0.503893 | 2.1:+63727479 | MS.gene047305:CDS |
AAAATGCTTGAGCTTGAAAA+GGG | 0.510249 | 2.1:+63726729 | MS.gene047305:CDS |
TGCAAAGCATCGAAAGCATA+AGG | 0.512230 | 2.1:-63728232 | None:intergenic |
CATTACCCCTTATGTTGGAA+TGG | 0.512394 | 2.1:+63726296 | MS.gene047305:CDS |
AGGTTCTGGAGCACCAGAAT+CGG | 0.513036 | 2.1:+63726239 | MS.gene047305:CDS |
AGGTCAGATAGAATTGTTTG+TGG | 0.513189 | 2.1:-63727279 | None:intergenic |
CATAAAAGCATATATAGACT+TGG | 0.513319 | 2.1:-63727622 | None:intergenic |
AATCATCGGGAATATTATGC+AGG | 0.520423 | 2.1:+63728404 | MS.gene047305:CDS |
CTTTGTGCAAAATCGAAAGA+AGG | 0.525916 | 2.1:+63726797 | MS.gene047305:CDS |
CAATGGCTTCAAAAGACGTA+TGG | 0.527901 | 2.1:+63726145 | None:intergenic |
CATCTTTAAGTCCGGGGTCA+AGG | 0.529096 | 2.1:-63727299 | None:intergenic |
GTTTGCCCCGGTTAAGAGGA+AGG | 0.530147 | 2.1:+63726458 | MS.gene047305:CDS |
GCTTGTAAACGCCTAATTGA+GGG | 0.531080 | 2.1:-63726410 | None:intergenic |
GGAATGACGTGTTTAGTCTC+AGG | 0.531762 | 2.1:-63727339 | None:intergenic |
GAGGGTGATGATTCTGATGA+AGG | 0.535697 | 2.1:+63726219 | MS.gene047305:CDS |
TTCAGAATCATCAATTACAA+AGG | 0.545164 | 2.1:+63728597 | MS.gene047305:CDS |
GTGTTTCTCCGGTTCATGAA+AGG | 0.545182 | 2.1:+63727249 | MS.gene047305:CDS |
ACTTACTAGAATTCTTAATG+AGG | 0.548103 | 2.1:+63728657 | MS.gene047305:CDS |
GCTACATCTGAGCTGTATAA+CGG | 0.548265 | 2.1:+63728283 | MS.gene047305:CDS |
GATAGGAAATCAGTGAGGTG+TGG | 0.551495 | 2.1:+63726501 | MS.gene047305:CDS |
ACCGATGGGGTCGAGACCGA+TGG | 0.554843 | 2.1:+63728697 | MS.gene047305:CDS |
GAGATATGTCTAAGACCGAT+GGG | 0.555361 | 2.1:+63728683 | MS.gene047305:CDS |
GAAGGTTATTCAGGAGAATG+AGG | 0.556385 | 2.1:+63726815 | MS.gene047305:CDS |
AGAAGGTTGAAAATATAGCT+TGG | 0.556814 | 2.1:+63726949 | MS.gene047305:CDS |
AGAGATATGTCTAAGACCGA+TGG | 0.562467 | 2.1:+63728682 | MS.gene047305:CDS |
AAATAACCTCTCACATAGGA+TGG | 0.565070 | 2.1:-63727570 | None:intergenic |
ATTCATGCTGCAAACTCCAT+CGG | 0.569005 | 2.1:-63728713 | None:intergenic |
ATTCTATCTGACCTTGACCC+CGG | 0.577694 | 2.1:+63727288 | MS.gene047305:CDS |
ACAAATACTCTGCTCTTGCA+AGG | 0.578215 | 2.1:+63728375 | MS.gene047305:CDS |
TACCATGGATGAGAATGAGA+AGG | 0.581496 | 2.1:+63726932 | MS.gene047305:CDS |
CTTTCTTGGAAAGGGATGTG+AGG | 0.596394 | 2.1:+63726772 | MS.gene047305:CDS |
TGAGTCTCCTTATGTGATTG+AGG | 0.600028 | 2.1:-63728151 | None:intergenic |
TACCAATTGAAGAGCATGCG+CGG | 0.607691 | 2.1:+63728197 | MS.gene047305:CDS |
TAATGGCATCTTTAAGTCCG+GGG | 0.609613 | 2.1:-63727305 | None:intergenic |
GATTTAAATTCGGCATAACG+AGG | 0.612578 | 2.1:-63727414 | None:intergenic |
GTCTAAGGAGGTTGTTGACG+GGG | 0.619389 | 2.1:+63726545 | MS.gene047305:CDS |
AAACACCATTCCAACATAAG+GGG | 0.620023 | 2.1:-63726301 | None:intergenic |
CGGAAACAACAATGTCCTTG+TGG | 0.620981 | 2.1:+63726171 | MS.gene047305:CDS |
AAGCTGGGTTTCCGGTACAC+CGG | 0.621789 | 2.1:+63726700 | MS.gene047305:CDS |
GGTTAAGAGGAAGGCAAATG+GGG | 0.628905 | 2.1:+63726467 | MS.gene047305:CDS |
TCGGCATAACGAGGCCCAAG+AGG | 0.630511 | 2.1:-63727405 | None:intergenic |
TGGTTTGGTATCAATAGTTG+TGG | 0.630835 | 2.1:+63727071 | MS.gene047305:CDS |
TCCATCGGTCTCGACCCCAT+CGG | 0.633244 | 2.1:-63728698 | None:intergenic |
GTGGAATAAGGCATTGAATG+TGG | 0.639736 | 2.1:-63727436 | None:intergenic |
TGGAGTTTGCAGCATGAATG+TGG | 0.649735 | 2.1:+63728717 | MS.gene047305:CDS |
TAAAATGTATCTGTCTAAGG+AGG | 0.650992 | 2.1:+63726533 | MS.gene047305:CDS |
TTGTTGACGGGGTTTCACAG+TGG | 0.656963 | 2.1:+63726556 | MS.gene047305:CDS |
ATTTGCCTTCCTCTTAACCG+GGG | 0.662005 | 2.1:-63726463 | None:intergenic |
TGGGCACCATCCTATGTGAG+AGG | 0.663195 | 2.1:+63727564 | MS.gene047305:CDS |
TTGTTTAGAATATTCCACAC+CGG | 0.665129 | 2.1:-63727360 | None:intergenic |
CCGAGAACGATCTTTAAACG+TGG | 0.667057 | 2.1:+63728498 | MS.gene047305:CDS |
GGTGTGGAATATTCTAAACA+AGG | 0.670977 | 2.1:+63727362 | MS.gene047305:CDS |
AATGCCCATGAAAATGATTG+TGG | 0.675484 | 2.1:-63727137 | None:intergenic |
TGCTTATCGGAAGATTCAGG+AGG | 0.685781 | 2.1:+63726647 | MS.gene047305:CDS |
AGAACGATCTTTAAACGTGG+AGG | 0.689325 | 2.1:+63728501 | MS.gene047305:CDS |
CTTGAAAAGGGAATTCAAGG+TGG | 0.689739 | 2.1:+63726741 | MS.gene047305:CDS |
AAGTGTTACATTACAAACGA+GGG | 0.690032 | 2.1:+63726201 | MS.gene047305:CDS |
TAACACTTCCAATCTCCACA+AGG | 0.707021 | 2.1:-63726186 | None:intergenic |
ATTCCACATCGAGAAAACAG+AGG | 0.714783 | 2.1:+63727452 | MS.gene047305:CDS |
GAAGTGTTACATTACAAACG+AGG | 0.716498 | 2.1:+63726200 | MS.gene047305:CDS |
CTAAACACGTCATTCCGGTG+TGG | 0.723440 | 2.1:+63727346 | MS.gene047305:CDS |
AGATATGTCTAAGACCGATG+GGG | 0.747503 | 2.1:+63728684 | MS.gene047305:CDS |
ATAGAGATAGGAAATCAGTG+AGG | 0.812534 | 2.1:+63726496 | MS.gene047305:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAATTCACAATTCATAAAAT+AGG | + | chr2.1:63728019-63728038 | MS.gene047305:intron | 15.0% |
!! | ATAATTCATTAGAATGCATT+GGG | - | chr2.1:63727837-63727856 | None:intergenic | 20.0% |
!! | ATTGAATGTGGATTTAAATT+CGG | - | chr2.1:63727427-63727446 | None:intergenic | 20.0% |
!!! | GTCATTTTTATTGTATCTTA+CGG | + | chr2.1:63727982-63728001 | MS.gene047305:intron | 20.0% |
!!! | TGAAAATAAATTTTCAGCTT+CGG | - | chr2.1:63728581-63728600 | None:intergenic | 20.0% |
! | AAAAGATTGACTATACAATG+TGG | - | chr2.1:63727904-63727923 | None:intergenic | 25.0% |
! | ACAAATACTACTTAAGTAGA+TGG | + | chr2.1:63728473-63728492 | MS.gene047305:CDS | 25.0% |
! | ACTTACTAGAATTCTTAATG+AGG | + | chr2.1:63728657-63728676 | MS.gene047305:CDS | 25.0% |
! | ATTTCTCAGCAATAAAACTT+TGG | - | chr2.1:63728540-63728559 | None:intergenic | 25.0% |
! | CAATATACAAATCTTAGAAC+TGG | + | chr2.1:63728172-63728191 | MS.gene047305:CDS | 25.0% |
! | CATAAGAGGAATATTTATGA+AGG | - | chr2.1:63727209-63727228 | None:intergenic | 25.0% |
! | CATAATTCATTAGAATGCAT+TGG | - | chr2.1:63727838-63727857 | None:intergenic | 25.0% |
! | TAAAACACAACCGAAAAAAA+TGG | - | chr2.1:63727102-63727121 | None:intergenic | 25.0% |
! | TCTACTTAAGTAGTATTTGT+CGG | - | chr2.1:63728473-63728492 | None:intergenic | 25.0% |
! | TTCAGAATCATCAATTACAA+AGG | + | chr2.1:63728597-63728616 | MS.gene047305:CDS | 25.0% |
!! | CATAAAAGCATATATAGACT+TGG | - | chr2.1:63727625-63727644 | None:intergenic | 25.0% |
!!! | AAAGTTTTATTGCTGAGAAA+TGG | + | chr2.1:63728539-63728558 | MS.gene047305:CDS | 25.0% |
!!! | CTTTGTTTATGATTTTACCA+TGG | + | chr2.1:63726917-63726936 | MS.gene047305:CDS | 25.0% |
!!! | TCTTTGTTTTGTATGGTTTT+CGG | + | chr2.1:63727733-63727752 | MS.gene047305:intron | 25.0% |
AAAACAAAGAGCAAGCATAT+GGG | - | chr2.1:63727723-63727742 | None:intergenic | 30.0% | |
AAAATGCTTGAGCTTGAAAA+GGG | + | chr2.1:63726729-63726748 | MS.gene047305:CDS | 30.0% | |
AAATCGAAAGAAGGTTATTC+AGG | + | chr2.1:63726806-63726825 | MS.gene047305:CDS | 30.0% | |
AAGTGTTACATTACAAACGA+GGG | + | chr2.1:63726201-63726220 | MS.gene047305:CDS | 30.0% | |
AATATCATTACCCCTTATGT+TGG | + | chr2.1:63726291-63726310 | MS.gene047305:CDS | 30.0% | |
ACATTTGTCTTTCTTGGAAA+GGG | + | chr2.1:63726764-63726783 | MS.gene047305:CDS | 30.0% | |
AGAAGGTTGAAAATATAGCT+TGG | + | chr2.1:63726949-63726968 | MS.gene047305:CDS | 30.0% | |
ATCAAGTTCCAAATCTGAAA+TGG | - | chr2.1:63728049-63728068 | None:intergenic | 30.0% | |
CAAAAAATAACCTCTCACAT+AGG | - | chr2.1:63727577-63727596 | None:intergenic | 30.0% | |
CAAGGAATAATCATCATAAG+AGG | - | chr2.1:63727223-63727242 | None:intergenic | 30.0% | |
CAGAGGAATTTGAACTTAAA+TGG | + | chr2.1:63727469-63727488 | MS.gene047305:CDS | 30.0% | |
CTACTTAAGTAGTATTTGTC+GGG | - | chr2.1:63728472-63728491 | None:intergenic | 30.0% | |
GAAAATATAGCTTGGTCATA+TGG | + | chr2.1:63726957-63726976 | MS.gene047305:CDS | 30.0% | |
GTTAATAAGAATGTCGTGTT+TGG | + | chr2.1:63726987-63727006 | MS.gene047305:CDS | 30.0% | |
TAAAATGTATCTGTCTAAGG+AGG | + | chr2.1:63726533-63726552 | MS.gene047305:CDS | 30.0% | |
TAAACACCATTCCAACATAA+GGG | - | chr2.1:63726305-63726324 | None:intergenic | 30.0% | |
TAGGTATTCCATTTCAGATT+TGG | + | chr2.1:63728038-63728057 | MS.gene047305:intron | 30.0% | |
TATGAATCACCACTTAAACT+TGG | + | chr2.1:63727854-63727873 | MS.gene047305:intron | 30.0% | |
TGCTAAAATGTATCTGTCTA+AGG | + | chr2.1:63726530-63726549 | MS.gene047305:CDS | 30.0% | |
TTAAACACCATTCCAACATA+AGG | - | chr2.1:63726306-63726325 | None:intergenic | 30.0% | |
TTGCAAGGAATTTGAATCAT+CGG | + | chr2.1:63728390-63728409 | MS.gene047305:CDS | 30.0% | |
! | AAACACCACAATCATTTTCA+TGG | + | chr2.1:63727132-63727151 | MS.gene047305:CDS | 30.0% |
! | AACACCACAATCATTTTCAT+GGG | + | chr2.1:63727133-63727152 | MS.gene047305:CDS | 30.0% |
! | ATCACTTATGGATTCCTTTT+TGG | + | chr2.1:63727044-63727063 | MS.gene047305:CDS | 30.0% |
! | GAAAAGGGAAAATGATGTTT+TGG | + | chr2.1:63726851-63726870 | MS.gene047305:CDS | 30.0% |
! | TTCTAAACAAGGTATCTAGT+TGG | + | chr2.1:63727373-63727392 | MS.gene047305:CDS | 30.0% |
! | TTGTTTAGAATATTCCACAC+CGG | - | chr2.1:63727363-63727382 | None:intergenic | 30.0% |
! | TTTTCATCCTCAATCACATA+AGG | + | chr2.1:63728144-63728163 | MS.gene047305:CDS | 30.0% |
!!! | ATTTTGTTTGTTATCGATCC+GGG | + | chr2.1:63726436-63726455 | MS.gene047305:CDS | 30.0% |
!!! | CTATGTGAGAGGTTATTTTT+TGG | + | chr2.1:63727575-63727594 | MS.gene047305:CDS | 30.0% |
!!! | GATTTTGTTTGTTATCGATC+CGG | + | chr2.1:63726435-63726454 | MS.gene047305:CDS | 30.0% |
AAACACCATTCCAACATAAG+GGG | - | chr2.1:63726304-63726323 | None:intergenic | 35.0% | |
AAATAACCTCTCACATAGGA+TGG | - | chr2.1:63727573-63727592 | None:intergenic | 35.0% | |
AATCATCGGGAATATTATGC+AGG | + | chr2.1:63728404-63728423 | MS.gene047305:CDS | 35.0% | |
AATGCCCATGAAAATGATTG+TGG | - | chr2.1:63727140-63727159 | None:intergenic | 35.0% | |
AGAGAAATGTCATAAGAGCA+TGG | - | chr2.1:63728079-63728098 | None:intergenic | 35.0% | |
AGGTCAGATAGAATTGTTTG+TGG | - | chr2.1:63727282-63727301 | None:intergenic | 35.0% | |
ATAGAGATAGGAAATCAGTG+AGG | + | chr2.1:63726496-63726515 | MS.gene047305:CDS | 35.0% | |
CAAAACAAAGAGCAAGCATA+TGG | - | chr2.1:63727724-63727743 | None:intergenic | 35.0% | |
CTCAGGAAATTCACTTCTAA+TGG | - | chr2.1:63727325-63727344 | None:intergenic | 35.0% | |
CTTCAAAAGACGTATGGATT+CGG | + | chr2.1:63726151-63726170 | MS.gene047305:CDS | 35.0% | |
CTTTGTGCAAAATCGAAAGA+AGG | + | chr2.1:63726797-63726816 | MS.gene047305:CDS | 35.0% | |
GAAAATGCTTGAGCTTGAAA+AGG | + | chr2.1:63726728-63726747 | MS.gene047305:CDS | 35.0% | |
GACATTTGTCTTTCTTGGAA+AGG | + | chr2.1:63726763-63726782 | MS.gene047305:CDS | 35.0% | |
GATTTAAATTCGGCATAACG+AGG | - | chr2.1:63727417-63727436 | None:intergenic | 35.0% | |
GGCATTGCTTAATGAGAAAA+GGG | + | chr2.1:63726836-63726855 | MS.gene047305:CDS | 35.0% | |
GGTGTGGAATATTCTAAACA+AGG | + | chr2.1:63727362-63727381 | MS.gene047305:CDS | 35.0% | |
GTATTCAGTTCGAGCATATT+GGG | + | chr2.1:63727545-63727564 | MS.gene047305:CDS | 35.0% | |
GTCCAAAATCAGAAACCATT+TGG | - | chr2.1:63727497-63727516 | None:intergenic | 35.0% | |
GTTCTTTCATCAGTTCTTTG+CGG | - | chr2.1:63728639-63728658 | None:intergenic | 35.0% | |
TACAACAGTATCCATGAGAA+GGG | - | chr2.1:63728106-63728125 | None:intergenic | 35.0% | |
TCTAATGGCATCTTTAAGTC+CGG | - | chr2.1:63727310-63727329 | None:intergenic | 35.0% | |
TCTTATCGATCGATCACTTA+TGG | + | chr2.1:63727032-63727051 | MS.gene047305:CDS | 35.0% | |
TGAACTTAAATGGAGCCAAA+TGG | + | chr2.1:63727479-63727498 | MS.gene047305:CDS | 35.0% | |
TGATGATTATTCCTTGATGC+AGG | + | chr2.1:63727227-63727246 | MS.gene047305:intron | 35.0% | |
TGCAAGGAATTTGAATCATC+GGG | + | chr2.1:63728391-63728410 | MS.gene047305:CDS | 35.0% | |
TGTACGACACTTCAAAAAGT+TGG | + | chr2.1:63728315-63728334 | MS.gene047305:CDS | 35.0% | |
TGTATTCAGTTCGAGCATAT+TGG | + | chr2.1:63727544-63727563 | MS.gene047305:CDS | 35.0% | |
TTCTTTCATCAGTTCTTTGC+GGG | - | chr2.1:63728638-63728657 | None:intergenic | 35.0% | |
! | AGCCAAATGGTTTCTGATTT+TGG | + | chr2.1:63727492-63727511 | MS.gene047305:CDS | 35.0% |
! | AGGCATTGCTTAATGAGAAA+AGG | + | chr2.1:63726835-63726854 | MS.gene047305:CDS | 35.0% |
! | ATCATTTTCATGGGCATTAC+AGG | + | chr2.1:63727142-63727161 | MS.gene047305:CDS | 35.0% |
! | ATGGTTTCTGATTTTGGACT+TGG | + | chr2.1:63727498-63727517 | MS.gene047305:CDS | 35.0% |
! | GAAGTGTTACATTACAAACG+AGG | + | chr2.1:63726200-63726219 | MS.gene047305:CDS | 35.0% |
! | GATGATGCTTTTGAGCATTA+TGG | + | chr2.1:63726333-63726352 | MS.gene047305:CDS | 35.0% |
! | TCTAGAATTAGCCCTCAATT+AGG | + | chr2.1:63726399-63726418 | MS.gene047305:CDS | 35.0% |
! | TGTTTTCTCGATGTGGAATA+AGG | - | chr2.1:63727451-63727470 | None:intergenic | 35.0% |
!! | CAGAGTATTTGTTCCTTTTC+TGG | - | chr2.1:63728367-63728386 | None:intergenic | 35.0% |
!! | TGGTTTGGTATCAATAGTTG+TGG | + | chr2.1:63727071-63727090 | MS.gene047305:CDS | 35.0% |
!! | TTTCGGTTGTGTTTTATTGC+AGG | + | chr2.1:63727106-63727125 | MS.gene047305:CDS | 35.0% |
!!! | GCTTTTTTGAACAGGTATGT+TGG | + | chr2.1:63727679-63727698 | MS.gene047305:intron | 35.0% |
!!! | TGCTTGCTCTTTGTTTTGTA+TGG | + | chr2.1:63727726-63727745 | MS.gene047305:intron | 35.0% |
!!! | TGTGGCAGAACCATTTTTTT+CGG | + | chr2.1:63727089-63727108 | MS.gene047305:CDS | 35.0% |
!!! | TTTGCGTAGCTTTTTTGAAC+AGG | + | chr2.1:63727671-63727690 | MS.gene047305:CDS | 35.0% |
AACAATGTCCTTGTGGAGAT+TGG | + | chr2.1:63726178-63726197 | MS.gene047305:CDS | 40.0% | |
AACCTTCTCATTCTCATCCA+TGG | - | chr2.1:63726937-63726956 | None:intergenic | 40.0% | |
ACAAATACTCTGCTCTTGCA+AGG | + | chr2.1:63728375-63728394 | MS.gene047305:CDS | 40.0% | |
AGAACGATCTTTAAACGTGG+AGG | + | chr2.1:63728501-63728520 | MS.gene047305:CDS | 40.0% | |
AGGTGGACATTTGTCTTTCT+TGG | + | chr2.1:63726758-63726777 | MS.gene047305:CDS | 40.0% | |
ATACTCTTGCTTTCGAAAGC+TGG | + | chr2.1:63726684-63726703 | MS.gene047305:CDS | 40.0% | |
ATTCATGCTGCAAACTCCAT+CGG | - | chr2.1:63728716-63728735 | None:intergenic | 40.0% | |
ATTCCACATCGAGAAAACAG+AGG | + | chr2.1:63727452-63727471 | MS.gene047305:CDS | 40.0% | |
CAATGTGGACAACACAAAAG+TGG | - | chr2.1:63727889-63727908 | None:intergenic | 40.0% | |
CATTACCCCTTATGTTGGAA+TGG | + | chr2.1:63726296-63726315 | MS.gene047305:CDS | 40.0% | |
CCACGTTTAAAGATCGTTCT+CGG | - | chr2.1:63728501-63728520 | None:intergenic | 40.0% | |
CGACACTTCAAAAAGTTGGA+TGG | + | chr2.1:63728319-63728338 | MS.gene047305:CDS | 40.0% | |
CTAATGGCATCTTTAAGTCC+GGG | - | chr2.1:63727309-63727328 | None:intergenic | 40.0% | |
CTACAACAGTATCCATGAGA+AGG | - | chr2.1:63728107-63728126 | None:intergenic | 40.0% | |
CTTCTCATGGATACTGTTGT+AGG | + | chr2.1:63728105-63728124 | MS.gene047305:intron | 40.0% | |
CTTGAAAAGGGAATTCAAGG+TGG | + | chr2.1:63726741-63726760 | MS.gene047305:CDS | 40.0% | |
GAAGGTTATTCAGGAGAATG+AGG | + | chr2.1:63726815-63726834 | MS.gene047305:CDS | 40.0% | |
GACATCTTCCTTTCATGAAC+CGG | - | chr2.1:63727260-63727279 | None:intergenic | 40.0% | |
GAGCTTGAAAAGGGAATTCA+AGG | + | chr2.1:63726738-63726757 | MS.gene047305:CDS | 40.0% | |
GATGATTCTGATGAAGGTTC+TGG | + | chr2.1:63726225-63726244 | MS.gene047305:CDS | 40.0% | |
GCTACATCTGAGCTGTATAA+CGG | + | chr2.1:63728283-63728302 | MS.gene047305:CDS | 40.0% | |
GCTTGTAAACGCCTAATTGA+GGG | - | chr2.1:63726413-63726432 | None:intergenic | 40.0% | |
TAACACTTCCAATCTCCACA+AGG | - | chr2.1:63726189-63726208 | None:intergenic | 40.0% | |
TAATGGCATCTTTAAGTCCG+GGG | - | chr2.1:63727308-63727327 | None:intergenic | 40.0% | |
TACCAAACCACACTCCAAAA+AGG | - | chr2.1:63727061-63727080 | None:intergenic | 40.0% | |
TACCATGGATGAGAATGAGA+AGG | + | chr2.1:63726932-63726951 | MS.gene047305:CDS | 40.0% | |
TACTCTTGCTTTCGAAAGCT+GGG | + | chr2.1:63726685-63726704 | MS.gene047305:CDS | 40.0% | |
TCATGGATACTGTTGTAGGT+TGG | + | chr2.1:63728109-63728128 | MS.gene047305:intron | 40.0% | |
TCTAGATCTTGCTTTCCTCA+TGG | - | chr2.1:63726385-63726404 | None:intergenic | 40.0% | |
TGAGACTAAACACGTCATTC+CGG | + | chr2.1:63727341-63727360 | MS.gene047305:CDS | 40.0% | |
TGAGTCTCCTTATGTGATTG+AGG | - | chr2.1:63728154-63728173 | None:intergenic | 40.0% | |
TTTCTCTTTCTCCCTTCTCA+TGG | + | chr2.1:63728092-63728111 | MS.gene047305:intron | 40.0% | |
! | AGAGATATGTCTAAGACCGA+TGG | + | chr2.1:63728682-63728701 | MS.gene047305:CDS | 40.0% |
! | AGATATGTCTAAGACCGATG+GGG | + | chr2.1:63728684-63728703 | MS.gene047305:CDS | 40.0% |
! | ATTCCTCTGTTTTCTCGATG+TGG | - | chr2.1:63727458-63727477 | None:intergenic | 40.0% |
! | ATTTTCACTATCCGGTGTAC+CGG | - | chr2.1:63726714-63726733 | None:intergenic | 40.0% |
! | GAGATATGTCTAAGACCGAT+GGG | + | chr2.1:63728683-63728702 | MS.gene047305:CDS | 40.0% |
! | GCTCAAGCATTTTCACTATC+CGG | - | chr2.1:63726722-63726741 | None:intergenic | 40.0% |
! | GGCAATTTTGCTAGAAAGCA+TGG | + | chr2.1:63726354-63726373 | MS.gene047305:CDS | 40.0% |
! | TGCGTCTTTTACCTGCTTAT+CGG | + | chr2.1:63726634-63726653 | MS.gene047305:CDS | 40.0% |
!! | GAAAGCATGGATTTTCCATG+AGG | + | chr2.1:63726367-63726386 | MS.gene047305:CDS | 40.0% |
!! | GTGGAATAAGGCATTGAATG+TGG | - | chr2.1:63727439-63727458 | None:intergenic | 40.0% |
!! | TGCAAAGCATCGAAAGCATA+AGG | - | chr2.1:63728235-63728254 | None:intergenic | 40.0% |
!! | TTATCTGCTTTCACCGATTC+TGG | - | chr2.1:63726255-63726274 | None:intergenic | 40.0% |
!!! | AGTTGGTTTTGTCTTCCTCT+TGG | + | chr2.1:63727390-63727409 | MS.gene047305:CDS | 40.0% |
!!! | ATGGATTCCTTTTTGGAGTG+TGG | + | chr2.1:63727051-63727070 | MS.gene047305:CDS | 40.0% |
!!! | GTTGGTTTTGTCTTCCTCTT+GGG | + | chr2.1:63727391-63727410 | MS.gene047305:CDS | 40.0% |
!!! | TTCCTTTTTGGAGTGTGGTT+TGG | + | chr2.1:63727056-63727075 | MS.gene047305:CDS | 40.0% |
ACCTGCTTATCGGAAGATTC+AGG | + | chr2.1:63726644-63726663 | MS.gene047305:CDS | 45.0% | |
ATTCTATCTGACCTTGACCC+CGG | + | chr2.1:63727288-63727307 | MS.gene047305:CDS | 45.0% | |
ATTTGCCTTCCTCTTAACCG+GGG | - | chr2.1:63726466-63726485 | None:intergenic | 45.0% | |
CATTTGCCTTCCTCTTAACC+GGG | - | chr2.1:63726467-63726486 | None:intergenic | 45.0% | |
CCATTTGCCTTCCTCTTAAC+CGG | - | chr2.1:63726468-63726487 | None:intergenic | 45.0% | |
CCGAGAACGATCTTTAAACG+TGG | + | chr2.1:63728498-63728517 | MS.gene047305:CDS | 45.0% | |
CGCTTGTAAACGCCTAATTG+AGG | - | chr2.1:63726414-63726433 | None:intergenic | 45.0% | |
CGGAAACAACAATGTCCTTG+TGG | + | chr2.1:63726171-63726190 | MS.gene047305:CDS | 45.0% | |
CGGTTAAGAGGAAGGCAAAT+GGG | + | chr2.1:63726466-63726485 | MS.gene047305:CDS | 45.0% | |
CGTGTTATGGCTACCAGAAA+AGG | + | chr2.1:63728351-63728370 | MS.gene047305:CDS | 45.0% | |
CTGTCTAAGGAGGTTGTTGA+CGG | + | chr2.1:63726543-63726562 | MS.gene047305:CDS | 45.0% | |
CTTTCTTGGAAAGGGATGTG+AGG | + | chr2.1:63726772-63726791 | MS.gene047305:CDS | 45.0% | |
GAGGGTGATGATTCTGATGA+AGG | + | chr2.1:63726219-63726238 | MS.gene047305:CDS | 45.0% | |
GATAGGAAATCAGTGAGGTG+TGG | + | chr2.1:63726501-63726520 | MS.gene047305:CDS | 45.0% | |
GGAATGACGTGTTTAGTCTC+AGG | - | chr2.1:63727342-63727361 | None:intergenic | 45.0% | |
GGTTAAGAGGAAGGCAAATG+GGG | + | chr2.1:63726467-63726486 | MS.gene047305:CDS | 45.0% | |
GTCATCATCTGCTTCTTTCG+CGG | - | chr2.1:63726898-63726917 | None:intergenic | 45.0% | |
GTGGACAACACAAAAGTGGT+TGG | - | chr2.1:63727885-63727904 | None:intergenic | 45.0% | |
GTGTTTCTCCGGTTCATGAA+AGG | + | chr2.1:63727249-63727268 | MS.gene047305:CDS | 45.0% | |
TCCTGAATCTTCCGATAAGC+AGG | - | chr2.1:63726648-63726667 | None:intergenic | 45.0% | |
TGCTTATCGGAAGATTCAGG+AGG | + | chr2.1:63726647-63726666 | MS.gene047305:CDS | 45.0% | |
TGGAGTTTGCAGCATGAATG+TGG | + | chr2.1:63728717-63728736 | MS.gene047305:CDS | 45.0% | |
TGTCTAAGGAGGTTGTTGAC+GGG | + | chr2.1:63726544-63726563 | MS.gene047305:CDS | 45.0% | |
TTGGCGTCACCAAGTTTAAG+TGG | - | chr2.1:63727866-63727885 | None:intergenic | 45.0% | |
! | CGTGCATAATCACGAGCTTT+TGG | + | chr2.1:63726599-63726618 | MS.gene047305:CDS | 45.0% |
! | TACCAATTGAAGAGCATGCG+CGG | + | chr2.1:63728197-63728216 | MS.gene047305:CDS | 45.0% |
!! | ATGGGGAGCATCATAGAGAT+AGG | + | chr2.1:63726484-63726503 | MS.gene047305:CDS | 45.0% |
ATGGAGAGCGACACGTGTTA+TGG | + | chr2.1:63728338-63728357 | MS.gene047305:CDS | 50.0% | |
CATCTTTAAGTCCGGGGTCA+AGG | - | chr2.1:63727302-63727321 | None:intergenic | 50.0% | |
CCGGTTAAGAGGAAGGCAAA+TGG | + | chr2.1:63726465-63726484 | MS.gene047305:CDS | 50.0% | |
CCTTGATGCAGGTGTTTCTC+CGG | + | chr2.1:63727238-63727257 | MS.gene047305:intron | 50.0% | |
CGATGCTTTGCAGCAAGAGT+TGG | + | chr2.1:63728243-63728262 | MS.gene047305:CDS | 50.0% | |
CTAAACACGTCATTCCGGTG+TGG | + | chr2.1:63727346-63727365 | MS.gene047305:CDS | 50.0% | |
GCTTTCGAAAGCTGGGTTTC+CGG | + | chr2.1:63726692-63726711 | MS.gene047305:CDS | 50.0% | |
GTCTAAGGAGGTTGTTGACG+GGG | + | chr2.1:63726545-63726564 | MS.gene047305:CDS | 50.0% | |
TTGTTGACGGGGTTTCACAG+TGG | + | chr2.1:63726556-63726575 | MS.gene047305:CDS | 50.0% | |
!! | AGGTTCTGGAGCACCAGAAT+CGG | + | chr2.1:63726239-63726258 | MS.gene047305:CDS | 50.0% |
AAGCTGGGTTTCCGGTACAC+CGG | + | chr2.1:63726700-63726719 | MS.gene047305:CDS | 55.0% | |
CCGGAGAAACACCTGCATCA+AGG | - | chr2.1:63727241-63727260 | None:intergenic | 55.0% | |
CTCCGCGCATGCTCTTCAAT+TGG | - | chr2.1:63728202-63728221 | None:intergenic | 55.0% | |
GTTTGCCCCGGTTAAGAGGA+AGG | + | chr2.1:63726458-63726477 | MS.gene047305:CDS | 55.0% | |
TGGGCACCATCCTATGTGAG+AGG | + | chr2.1:63727564-63727583 | MS.gene047305:CDS | 55.0% | |
TTATCGATCCGGGTTTGCCC+CGG | + | chr2.1:63726446-63726465 | MS.gene047305:CDS | 55.0% | |
CCTCTTAACCGGGGCAAACC+CGG | - | chr2.1:63726457-63726476 | None:intergenic | 60.0% | |
TCCATCGGTCTCGACCCCAT+CGG | - | chr2.1:63728701-63728720 | None:intergenic | 60.0% | |
TCGGCATAACGAGGCCCAAG+AGG | - | chr2.1:63727408-63727427 | None:intergenic | 60.0% | |
ACCGATGGGGTCGAGACCGA+TGG | + | chr2.1:63728697-63728716 | MS.gene047305:CDS | 65.0% | |
CCGGGTTTGCCCCGGTTAAG+AGG | + | chr2.1:63726454-63726473 | MS.gene047305:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.1 | gene | 63726147 | 63728759 | 63726147 | ID=MS.gene047305 |
chr2.1 | mRNA | 63726147 | 63728759 | 63726147 | ID=MS.gene047305.t1;Parent=MS.gene047305 |
chr2.1 | exon | 63726147 | 63727163 | 63726147 | ID=MS.gene047305.t1.exon1;Parent=MS.gene047305.t1 |
chr2.1 | CDS | 63726147 | 63727163 | 63726147 | ID=cds.MS.gene047305.t1;Parent=MS.gene047305.t1 |
chr2.1 | exon | 63727249 | 63727692 | 63727249 | ID=MS.gene047305.t1.exon2;Parent=MS.gene047305.t1 |
chr2.1 | CDS | 63727249 | 63727692 | 63727249 | ID=cds.MS.gene047305.t1;Parent=MS.gene047305.t1 |
chr2.1 | exon | 63728127 | 63728759 | 63728127 | ID=MS.gene047305.t1.exon3;Parent=MS.gene047305.t1 |
chr2.1 | CDS | 63728127 | 63728759 | 63728127 | ID=cds.MS.gene047305.t1;Parent=MS.gene047305.t1 |
Gene Sequence |
Protein sequence |