Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene047334.t1 | XP_003593614.1 | 80.8 | 297 | 41 | 4 | 1 | 297 | 29 | 309 | 9.30E-83 | 317 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene047334.t1 | Q9FZA4 | 45.4 | 304 | 122 | 12 | 18 | 297 | 28 | 311 | 3.6e-27 | 123.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene047334.t1 | G7ISD2 | 80.8 | 297 | 41 | 4 | 1 | 297 | 29 | 309 | 6.7e-83 | 317.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene047334.t1 | TF | C2C2-Dof |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene047334.t1 | MTR_2g014170 | 89.226 | 297 | 16 | 4 | 1 | 297 | 29 | 309 | 1.60e-143 | 406 |
MS.gene047334.t1 | MTR_4g088580 | 45.682 | 359 | 119 | 17 | 1 | 297 | 40 | 384 | 2.57e-58 | 191 |
MS.gene047334.t1 | MTR_4g063780 | 59.223 | 103 | 26 | 2 | 14 | 115 | 72 | 159 | 1.39e-32 | 123 |
MS.gene047334.t1 | MTR_4g022370 | 57.018 | 114 | 47 | 2 | 1 | 112 | 66 | 179 | 4.61e-32 | 122 |
MS.gene047334.t1 | MTR_8g479350 | 71.429 | 70 | 20 | 0 | 12 | 81 | 63 | 132 | 1.02e-31 | 120 |
MS.gene047334.t1 | MTR_2g096740 | 62.500 | 88 | 19 | 1 | 17 | 104 | 62 | 135 | 1.26e-31 | 119 |
MS.gene047334.t1 | MTR_2g096740 | 62.500 | 88 | 19 | 1 | 17 | 104 | 77 | 150 | 1.57e-31 | 119 |
MS.gene047334.t1 | MTR_1g056810 | 48.872 | 133 | 64 | 2 | 7 | 139 | 2 | 130 | 1.73e-31 | 119 |
MS.gene047334.t1 | MTR_8g079060 | 67.647 | 68 | 22 | 0 | 13 | 80 | 25 | 92 | 7.08e-31 | 115 |
MS.gene047334.t1 | MTR_7g024670 | 65.753 | 73 | 25 | 0 | 7 | 79 | 67 | 139 | 1.05e-30 | 119 |
MS.gene047334.t1 | MTR_4g461080 | 84.211 | 57 | 9 | 0 | 13 | 69 | 25 | 81 | 1.28e-30 | 116 |
MS.gene047334.t1 | MTR_1g077600 | 70.312 | 64 | 19 | 0 | 10 | 73 | 36 | 99 | 1.76e-30 | 115 |
MS.gene047334.t1 | MTR_1g077600 | 70.312 | 64 | 19 | 0 | 10 | 73 | 36 | 99 | 2.15e-30 | 116 |
MS.gene047334.t1 | MTR_8g068210 | 61.176 | 85 | 27 | 1 | 12 | 96 | 27 | 105 | 9.47e-30 | 115 |
MS.gene047334.t1 | MTR_8g015840 | 72.727 | 66 | 16 | 1 | 13 | 78 | 16 | 79 | 1.40e-29 | 112 |
MS.gene047334.t1 | MTR_3g091820 | 76.562 | 64 | 12 | 1 | 12 | 75 | 38 | 98 | 2.07e-29 | 114 |
MS.gene047334.t1 | MTR_2g093220 | 72.059 | 68 | 18 | 1 | 3 | 69 | 25 | 92 | 2.38e-29 | 113 |
MS.gene047334.t1 | MTR_7g059400 | 62.105 | 95 | 32 | 1 | 13 | 103 | 72 | 166 | 2.45e-29 | 114 |
MS.gene047334.t1 | MTR_8g027295 | 54.369 | 103 | 34 | 3 | 3 | 105 | 11 | 100 | 4.01e-29 | 112 |
MS.gene047334.t1 | MTR_2g013370 | 69.118 | 68 | 20 | 1 | 6 | 73 | 35 | 101 | 8.87e-29 | 111 |
MS.gene047334.t1 | MTR_5g031440 | 79.630 | 54 | 11 | 0 | 14 | 67 | 40 | 93 | 1.81e-28 | 112 |
MS.gene047334.t1 | MTR_3g090430 | 73.016 | 63 | 17 | 0 | 16 | 78 | 50 | 112 | 9.56e-28 | 110 |
MS.gene047334.t1 | MTR_4g109980 | 81.132 | 53 | 10 | 0 | 15 | 67 | 38 | 90 | 1.06e-27 | 109 |
MS.gene047334.t1 | MTR_2g059540 | 86.000 | 50 | 7 | 0 | 16 | 65 | 30 | 79 | 1.33e-27 | 106 |
MS.gene047334.t1 | MTR_2g014060 | 77.586 | 58 | 13 | 0 | 11 | 68 | 19 | 76 | 1.35e-27 | 109 |
MS.gene047334.t1 | MTR_4g089095 | 75.000 | 60 | 14 | 1 | 15 | 74 | 48 | 106 | 2.02e-27 | 108 |
MS.gene047334.t1 | MTR_3g077750 | 82.692 | 52 | 9 | 0 | 16 | 67 | 60 | 111 | 2.27e-27 | 108 |
MS.gene047334.t1 | MTR_4g089095 | 75.000 | 60 | 14 | 1 | 15 | 74 | 14 | 72 | 2.54e-27 | 107 |
MS.gene047334.t1 | MTR_3g435480 | 62.687 | 67 | 25 | 0 | 6 | 72 | 125 | 191 | 3.21e-26 | 107 |
MS.gene047334.t1 | MTR_4g082060 | 53.947 | 76 | 35 | 0 | 6 | 81 | 111 | 186 | 7.07e-25 | 103 |
MS.gene047334.t1 | MTR_8g044220 | 50.588 | 85 | 38 | 1 | 6 | 90 | 107 | 187 | 1.32e-24 | 102 |
MS.gene047334.t1 | MTR_7g010950 | 63.934 | 61 | 22 | 0 | 11 | 71 | 129 | 189 | 1.58e-24 | 103 |
MS.gene047334.t1 | MTR_6g012450 | 64.407 | 59 | 21 | 0 | 11 | 69 | 130 | 188 | 5.35e-24 | 101 |
MS.gene047334.t1 | MTR_2g016030 | 61.017 | 59 | 23 | 0 | 10 | 68 | 40 | 98 | 5.93e-24 | 95.9 |
MS.gene047334.t1 | MTR_7g086780 | 55.882 | 68 | 30 | 0 | 2 | 69 | 84 | 151 | 8.11e-24 | 100 |
MS.gene047334.t1 | MTR_5g041420 | 59.375 | 64 | 26 | 0 | 6 | 69 | 127 | 190 | 1.11e-23 | 99.0 |
MS.gene047334.t1 | MTR_5g041380 | 44.828 | 116 | 61 | 1 | 1 | 113 | 111 | 226 | 1.28e-23 | 99.4 |
MS.gene047334.t1 | MTR_6g027450 | 57.812 | 64 | 27 | 0 | 6 | 69 | 78 | 141 | 1.59e-23 | 98.6 |
MS.gene047334.t1 | MTR_5g041400 | 46.535 | 101 | 54 | 0 | 1 | 101 | 103 | 203 | 3.26e-23 | 98.2 |
MS.gene047334.t1 | MTR_6g027460 | 56.250 | 64 | 28 | 0 | 6 | 69 | 85 | 148 | 1.26e-22 | 96.7 |
MS.gene047334.t1 | MTR_5g041530 | 58.209 | 67 | 28 | 0 | 6 | 72 | 129 | 195 | 2.64e-22 | 95.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene047334.t1 | AT1G28310 | 43.182 | 308 | 125 | 13 | 17 | 297 | 27 | 311 | 1.13e-45 | 157 |
MS.gene047334.t1 | AT1G28310 | 43.182 | 308 | 125 | 13 | 17 | 297 | 51 | 335 | 1.96e-45 | 157 |
MS.gene047334.t1 | AT1G51700 | 42.945 | 163 | 81 | 5 | 3 | 162 | 21 | 174 | 2.96e-32 | 118 |
MS.gene047334.t1 | AT3G55370 | 70.588 | 68 | 20 | 0 | 14 | 81 | 73 | 140 | 4.40e-32 | 121 |
MS.gene047334.t1 | AT3G55370 | 70.588 | 68 | 20 | 0 | 14 | 81 | 73 | 140 | 5.37e-32 | 122 |
MS.gene047334.t1 | AT3G55370 | 70.588 | 68 | 20 | 0 | 14 | 81 | 118 | 185 | 7.64e-32 | 122 |
MS.gene047334.t1 | AT3G50410 | 65.333 | 75 | 26 | 0 | 1 | 75 | 14 | 88 | 1.00e-31 | 119 |
MS.gene047334.t1 | AT3G45610 | 41.212 | 165 | 77 | 5 | 14 | 178 | 37 | 181 | 3.54e-31 | 117 |
MS.gene047334.t1 | AT2G28810 | 81.034 | 58 | 11 | 0 | 11 | 68 | 71 | 128 | 5.15e-31 | 118 |
MS.gene047334.t1 | AT1G07640 | 78.689 | 61 | 13 | 0 | 17 | 77 | 21 | 81 | 5.16e-31 | 117 |
MS.gene047334.t1 | AT1G07640 | 78.689 | 61 | 13 | 0 | 17 | 77 | 77 | 137 | 6.49e-31 | 118 |
MS.gene047334.t1 | AT2G28810 | 81.034 | 58 | 11 | 0 | 11 | 68 | 88 | 145 | 7.18e-31 | 118 |
MS.gene047334.t1 | AT1G07640 | 78.689 | 61 | 13 | 0 | 17 | 77 | 85 | 145 | 8.67e-31 | 118 |
MS.gene047334.t1 | AT5G65590 | 73.846 | 65 | 17 | 0 | 12 | 76 | 36 | 100 | 1.23e-30 | 117 |
MS.gene047334.t1 | AT2G37590 | 65.753 | 73 | 25 | 0 | 1 | 73 | 73 | 145 | 1.79e-30 | 117 |
MS.gene047334.t1 | AT5G60200 | 64.865 | 74 | 26 | 0 | 11 | 84 | 49 | 122 | 2.42e-30 | 115 |
MS.gene047334.t1 | AT2G28510 | 39.891 | 183 | 81 | 6 | 15 | 189 | 46 | 207 | 1.10e-29 | 114 |
MS.gene047334.t1 | AT5G02460 | 87.037 | 54 | 7 | 0 | 16 | 69 | 94 | 147 | 1.14e-29 | 116 |
MS.gene047334.t1 | AT3G21270 | 78.947 | 57 | 12 | 0 | 17 | 73 | 29 | 85 | 2.25e-29 | 111 |
MS.gene047334.t1 | AT5G60850 | 55.670 | 97 | 26 | 2 | 13 | 109 | 47 | 126 | 7.40e-29 | 112 |
MS.gene047334.t1 | AT4G38000 | 78.947 | 57 | 12 | 0 | 14 | 70 | 38 | 94 | 1.48e-28 | 110 |
MS.gene047334.t1 | AT5G66940 | 48.305 | 118 | 56 | 3 | 13 | 128 | 28 | 142 | 3.55e-28 | 108 |
MS.gene047334.t1 | AT4G24060 | 66.154 | 65 | 22 | 0 | 5 | 69 | 41 | 105 | 5.88e-28 | 110 |
MS.gene047334.t1 | AT1G21340 | 42.949 | 156 | 55 | 6 | 10 | 136 | 31 | 181 | 6.67e-28 | 108 |
MS.gene047334.t1 | AT3G61850 | 66.667 | 63 | 21 | 0 | 7 | 69 | 52 | 114 | 1.39e-27 | 108 |
MS.gene047334.t1 | AT3G61850 | 66.667 | 63 | 21 | 0 | 7 | 69 | 52 | 114 | 1.39e-27 | 108 |
MS.gene047334.t1 | AT3G61850 | 65.217 | 69 | 21 | 1 | 7 | 75 | 52 | 117 | 1.90e-27 | 108 |
MS.gene047334.t1 | AT3G61850 | 66.667 | 63 | 21 | 0 | 7 | 69 | 64 | 126 | 2.14e-27 | 108 |
MS.gene047334.t1 | AT3G61850 | 65.217 | 69 | 21 | 1 | 7 | 75 | 64 | 129 | 2.41e-27 | 108 |
MS.gene047334.t1 | AT3G52440 | 74.194 | 62 | 14 | 1 | 19 | 78 | 27 | 88 | 1.61e-26 | 105 |
MS.gene047334.t1 | AT3G52440 | 74.194 | 62 | 14 | 1 | 19 | 78 | 46 | 107 | 2.23e-26 | 105 |
MS.gene047334.t1 | AT4G00940 | 75.000 | 56 | 14 | 0 | 14 | 69 | 65 | 120 | 7.05e-26 | 104 |
MS.gene047334.t1 | AT4G00940 | 75.000 | 56 | 14 | 0 | 14 | 69 | 65 | 120 | 7.05e-26 | 104 |
MS.gene047334.t1 | AT4G00940 | 75.000 | 56 | 14 | 0 | 14 | 69 | 65 | 120 | 7.05e-26 | 104 |
MS.gene047334.t1 | AT5G62940 | 82.000 | 50 | 9 | 0 | 18 | 67 | 74 | 123 | 8.08e-26 | 105 |
MS.gene047334.t1 | AT1G64620 | 75.926 | 54 | 13 | 0 | 12 | 65 | 44 | 97 | 1.06e-25 | 104 |
MS.gene047334.t1 | AT5G39660 | 63.636 | 66 | 24 | 0 | 6 | 71 | 127 | 192 | 1.09e-25 | 106 |
MS.gene047334.t1 | AT5G39660 | 63.636 | 66 | 24 | 0 | 6 | 71 | 127 | 192 | 1.09e-25 | 106 |
MS.gene047334.t1 | AT5G39660 | 63.636 | 66 | 24 | 0 | 6 | 71 | 127 | 192 | 1.09e-25 | 106 |
MS.gene047334.t1 | AT3G47500 | 71.930 | 57 | 16 | 0 | 15 | 71 | 108 | 164 | 1.25e-25 | 105 |
MS.gene047334.t1 | AT2G46590 | 78.431 | 51 | 11 | 0 | 14 | 64 | 65 | 115 | 1.31e-25 | 104 |
MS.gene047334.t1 | AT2G46590 | 78.431 | 51 | 11 | 0 | 14 | 64 | 77 | 127 | 1.47e-25 | 104 |
MS.gene047334.t1 | AT5G62430 | 62.903 | 62 | 23 | 0 | 11 | 72 | 48 | 109 | 4.28e-25 | 102 |
MS.gene047334.t1 | AT1G47655 | 72.549 | 51 | 14 | 0 | 15 | 65 | 27 | 77 | 3.67e-24 | 97.8 |
MS.gene047334.t1 | AT4G21050 | 76.000 | 50 | 12 | 0 | 19 | 68 | 26 | 75 | 8.35e-24 | 96.7 |
MS.gene047334.t1 | AT1G26790 | 57.353 | 68 | 27 | 1 | 2 | 69 | 98 | 163 | 8.57e-24 | 100 |
MS.gene047334.t1 | AT1G29160 | 56.923 | 65 | 28 | 0 | 10 | 74 | 55 | 119 | 1.13e-23 | 95.5 |
MS.gene047334.t1 | AT2G34140 | 56.923 | 65 | 28 | 0 | 10 | 74 | 51 | 115 | 1.56e-23 | 95.1 |
MS.gene047334.t1 | AT1G69570 | 56.716 | 67 | 29 | 0 | 11 | 77 | 126 | 192 | 5.28e-23 | 98.2 |
MS.gene047334.t1 | AT4G21040 | 75.510 | 49 | 12 | 0 | 19 | 67 | 27 | 75 | 1.04e-21 | 91.7 |
MS.gene047334.t1 | AT4G21080 | 71.429 | 49 | 14 | 0 | 19 | 67 | 27 | 75 | 1.13e-20 | 89.4 |
MS.gene047334.t1 | AT4G21030 | 60.870 | 46 | 18 | 0 | 19 | 64 | 23 | 68 | 5.50e-13 | 67.0 |
Find 52 sgRNAs with CRISPR-Local
Find 58 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGGCTTGGAATTTAACAATT+TGG | 0.140338 | 2.3:+70602422 | MS.gene047334:CDS |
GCAAAGCTTGCAAACGTTAT+TGG | 0.143992 | 2.3:+70601854 | MS.gene047334:CDS |
AGGACTAATATTATGATTTA+AGG | 0.162696 | 2.3:-70602055 | None:intergenic |
CACCAGCTTCTTCACTTTAC+TGG | 0.188996 | 2.3:+70602514 | MS.gene047334:CDS |
GGCTTGGAATTTAACAATTT+GGG | 0.228469 | 2.3:+70602423 | MS.gene047334:CDS |
AACGATCAAGCTTCTAATAT+TGG | 0.247824 | 2.3:+70602570 | MS.gene047334:CDS |
TGTATAACCATTATGATCAT+TGG | 0.338919 | 2.3:-70602238 | None:intergenic |
GGACAAGAGGTGGTACTCTT+AGG | 0.348242 | 2.3:+70601875 | MS.gene047334:CDS |
TCTAGAATCTCAACAAGTTC+AGG | 0.387293 | 2.3:+70602147 | MS.gene047334:CDS |
CATCATCAGCTATTGGTGTT+TGG | 0.393178 | 2.3:+70602547 | MS.gene047334:CDS |
GTGGTGTTTGGTTTGGAAGT+AGG | 0.405131 | 2.3:-70602018 | None:intergenic |
GATCATAATGGTTATACAAA+TGG | 0.418978 | 2.3:+70602243 | MS.gene047334:CDS |
ATTATGATCATTGGCTTCGC+TGG | 0.424556 | 2.3:-70602229 | None:intergenic |
CTTAGGAATGTTCCTGTTGG+TGG | 0.434008 | 2.3:+70601892 | MS.gene047334:CDS |
GAATTTGAAGAAGTGGTGTT+TGG | 0.444730 | 2.3:-70602030 | None:intergenic |
ACAGCATCATCATCAGCTAT+TGG | 0.454258 | 2.3:+70602540 | MS.gene047334:CDS |
TGAAGAAGTGGTGTTTGGTT+TGG | 0.459504 | 2.3:-70602025 | None:intergenic |
TTGGGGAATGGAAGTGAGAA+AGG | 0.465690 | 2.3:+70602441 | MS.gene047334:CDS |
AGAAGAATTAGTAGTATCAA+TGG | 0.471958 | 2.3:-70601980 | None:intergenic |
CTTCTGTAACCACCACCAAC+AGG | 0.474357 | 2.3:-70601904 | None:intergenic |
GAATTTAACAATTTGGGGAA+TGG | 0.481892 | 2.3:+70602429 | MS.gene047334:CDS |
TAAGGTTGAATTTGAAGAAG+TGG | 0.481982 | 2.3:-70602037 | None:intergenic |
CAACATAAATTCATGAATGA+TGG | 0.486443 | 2.3:+70602384 | MS.gene047334:CDS |
CAAGCTTTGCAGAAATGTCT+TGG | 0.496012 | 2.3:-70601841 | None:intergenic |
CAGCCTCAGATGAATACCAT+TGG | 0.500808 | 2.3:+70602180 | MS.gene047334:CDS |
AAAGGAATGAAGAAAGATGA+AGG | 0.500974 | 2.3:+70602459 | MS.gene047334:CDS |
GAAGAAAGATGAAGGAGAGA+TGG | 0.502257 | 2.3:+70602467 | MS.gene047334:CDS |
GGCATAACTGATGCATTACT+TGG | 0.503446 | 2.3:-70602336 | None:intergenic |
GAGATATTGAACCTTGAGAA+TGG | 0.505952 | 2.3:-70602126 | None:intergenic |
TTGGAAGTAGGAGTTGAAGA+AGG | 0.509651 | 2.3:-70602006 | None:intergenic |
AGGAATGTTCCTGTTGGTGG+TGG | 0.516563 | 2.3:+70601895 | MS.gene047334:CDS |
AGCGAAGCCAATGATCATAA+TGG | 0.521310 | 2.3:+70602231 | MS.gene047334:CDS |
ATGTGAATCTTCCATTCTCA+AGG | 0.533312 | 2.3:+70602115 | MS.gene047334:CDS |
CTTGATAAACCATAAAACAT+AGG | 0.540160 | 2.3:-70602075 | None:intergenic |
GGCTTCGCTGGACGTAAACC+CGG | 0.542853 | 2.3:-70602217 | None:intergenic |
GCTTGGAATTTAACAATTTG+GGG | 0.544684 | 2.3:+70602424 | MS.gene047334:CDS |
ATTAGTAGTATCAATGGTGG+AGG | 0.545112 | 2.3:-70601974 | None:intergenic |
AGAATTAGTAGTATCAATGG+TGG | 0.550623 | 2.3:-70601977 | None:intergenic |
CAGATGAATACCATTGGAGT+AGG | 0.575150 | 2.3:+70602186 | MS.gene047334:CDS |
TGCAAACGTTATTGGACAAG+AGG | 0.578125 | 2.3:+70601862 | MS.gene047334:CDS |
ACTCTTAGGAATGTTCCTGT+TGG | 0.582456 | 2.3:+70601889 | MS.gene047334:CDS |
TTCCAGTAAAGTGAAGAAGC+TGG | 0.599918 | 2.3:-70602516 | None:intergenic |
TGAAGGAGAGATGGAACATG+TGG | 0.611078 | 2.3:+70602476 | MS.gene047334:CDS |
ACTCCAATGGTATTCATCTG+AGG | 0.617945 | 2.3:-70602183 | None:intergenic |
AGAGCAGAACTCAACAGAGA+AGG | 0.622062 | 2.3:-70602357 | None:intergenic |
GGATGAAAAGCCTACTCCAA+TGG | 0.628438 | 2.3:-70602196 | None:intergenic |
AAACGTTATTGGACAAGAGG+TGG | 0.639210 | 2.3:+70601865 | MS.gene047334:CDS |
CAGTAAAGTGAAGAAGCTGG+TGG | 0.648703 | 2.3:-70602513 | None:intergenic |
GAAGGAGAGATGGAACATGT+GGG | 0.678274 | 2.3:+70602477 | MS.gene047334:CDS |
TTAGTAGTATCAATGGTGGA+GGG | 0.679047 | 2.3:-70601973 | None:intergenic |
GGAGAGATGGAACATGTGGG+TGG | 0.710445 | 2.3:+70602480 | MS.gene047334:CDS |
GTGTTTGATGAGTCACAACG+TGG | 0.749573 | 2.3:-70601781 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AGGACTAATATTATGATTTA+AGG | - | chr2.3:70602058-70602077 | None:intergenic | 20.0% |
!!! | AATATTAGTCCTATGTTTTA+TGG | + | chr2.3:70602066-70602085 | MS.gene047334:CDS | 20.0% |
! | AGAAGAATTAGTAGTATCAA+TGG | - | chr2.3:70601983-70602002 | None:intergenic | 25.0% |
! | CAACATAAATTCATGAATGA+TGG | + | chr2.3:70602384-70602403 | MS.gene047334:CDS | 25.0% |
! | CTTGATAAACCATAAAACAT+AGG | - | chr2.3:70602078-70602097 | None:intergenic | 25.0% |
! | GATCATAATGGTTATACAAA+TGG | + | chr2.3:70602243-70602262 | MS.gene047334:CDS | 25.0% |
! | TGTATAACCATTATGATCAT+TGG | - | chr2.3:70602241-70602260 | None:intergenic | 25.0% |
AAAGGAATGAAGAAAGATGA+AGG | + | chr2.3:70602459-70602478 | MS.gene047334:CDS | 30.0% | |
AACGATCAAGCTTCTAATAT+TGG | + | chr2.3:70602570-70602589 | MS.gene047334:CDS | 30.0% | |
AGAATTAGTAGTATCAATGG+TGG | - | chr2.3:70601980-70601999 | None:intergenic | 30.0% | |
GAATTTAACAATTTGGGGAA+TGG | + | chr2.3:70602429-70602448 | MS.gene047334:CDS | 30.0% | |
GCTTGGAATTTAACAATTTG+GGG | + | chr2.3:70602424-70602443 | MS.gene047334:CDS | 30.0% | |
GGCTTGGAATTTAACAATTT+GGG | + | chr2.3:70602423-70602442 | MS.gene047334:CDS | 30.0% | |
TAAGGTTGAATTTGAAGAAG+TGG | - | chr2.3:70602040-70602059 | None:intergenic | 30.0% | |
ATGTGAATCTTCCATTCTCA+AGG | + | chr2.3:70602115-70602134 | MS.gene047334:CDS | 35.0% | |
ATTAGTAGTATCAATGGTGG+AGG | - | chr2.3:70601977-70601996 | None:intergenic | 35.0% | |
GAATTTGAAGAAGTGGTGTT+TGG | - | chr2.3:70602033-70602052 | None:intergenic | 35.0% | |
GAGATATTGAACCTTGAGAA+TGG | - | chr2.3:70602129-70602148 | None:intergenic | 35.0% | |
GGGCTTGGAATTTAACAATT+TGG | + | chr2.3:70602422-70602441 | MS.gene047334:CDS | 35.0% | |
! | TCTAGAATCTCAACAAGTTC+AGG | + | chr2.3:70602147-70602166 | MS.gene047334:CDS | 35.0% |
! | TTAGTAGTATCAATGGTGGA+GGG | - | chr2.3:70601976-70601995 | None:intergenic | 35.0% |
AAACGTTATTGGACAAGAGG+TGG | + | chr2.3:70601865-70601884 | MS.gene047334:CDS | 40.0% | |
ACAGCATCATCATCAGCTAT+TGG | + | chr2.3:70602540-70602559 | MS.gene047334:CDS | 40.0% | |
ACTCCAATGGTATTCATCTG+AGG | - | chr2.3:70602186-70602205 | None:intergenic | 40.0% | |
ACTCTTAGGAATGTTCCTGT+TGG | + | chr2.3:70601889-70601908 | MS.gene047334:CDS | 40.0% | |
AGCGAAGCCAATGATCATAA+TGG | + | chr2.3:70602231-70602250 | MS.gene047334:CDS | 40.0% | |
CAAGCTTTGCAGAAATGTCT+TGG | - | chr2.3:70601844-70601863 | None:intergenic | 40.0% | |
CAGATGAATACCATTGGAGT+AGG | + | chr2.3:70602186-70602205 | MS.gene047334:CDS | 40.0% | |
GAAGAAAGATGAAGGAGAGA+TGG | + | chr2.3:70602467-70602486 | MS.gene047334:CDS | 40.0% | |
GCAAAGCTTGCAAACGTTAT+TGG | + | chr2.3:70601854-70601873 | MS.gene047334:CDS | 40.0% | |
GGCATAACTGATGCATTACT+TGG | - | chr2.3:70602339-70602358 | None:intergenic | 40.0% | |
TGAAGAAGTGGTGTTTGGTT+TGG | - | chr2.3:70602028-70602047 | None:intergenic | 40.0% | |
TGCAAACGTTATTGGACAAG+AGG | + | chr2.3:70601862-70601881 | MS.gene047334:CDS | 40.0% | |
TTCCAGTAAAGTGAAGAAGC+TGG | - | chr2.3:70602519-70602538 | None:intergenic | 40.0% | |
TTGGAAGTAGGAGTTGAAGA+AGG | - | chr2.3:70602009-70602028 | None:intergenic | 40.0% | |
! | ATTGGAGTAGGCTTTTCATC+CGG | + | chr2.3:70602198-70602217 | MS.gene047334:CDS | 40.0% |
! | CATCATCAGCTATTGGTGTT+TGG | + | chr2.3:70602547-70602566 | MS.gene047334:CDS | 40.0% |
! | GATGGTAGCAACACTTTTCA+GGG | + | chr2.3:70602402-70602421 | MS.gene047334:CDS | 40.0% |
! | TGATGGTAGCAACACTTTTC+AGG | + | chr2.3:70602401-70602420 | MS.gene047334:CDS | 40.0% |
!! | ATTATGATCATTGGCTTCGC+TGG | - | chr2.3:70602232-70602251 | None:intergenic | 40.0% |
AGAGCAGAACTCAACAGAGA+AGG | - | chr2.3:70602360-70602379 | None:intergenic | 45.0% | |
CACCAGCTTCTTCACTTTAC+TGG | + | chr2.3:70602514-70602533 | MS.gene047334:CDS | 45.0% | |
CAGCCTCAGATGAATACCAT+TGG | + | chr2.3:70602180-70602199 | MS.gene047334:CDS | 45.0% | |
CAGTAAAGTGAAGAAGCTGG+TGG | - | chr2.3:70602516-70602535 | None:intergenic | 45.0% | |
CTTAGGAATGTTCCTGTTGG+TGG | + | chr2.3:70601892-70601911 | MS.gene047334:CDS | 45.0% | |
GAAGGAGAGATGGAACATGT+GGG | + | chr2.3:70602477-70602496 | MS.gene047334:CDS | 45.0% | |
GGATGAAAAGCCTACTCCAA+TGG | - | chr2.3:70602199-70602218 | None:intergenic | 45.0% | |
GTGTTTGATGAGTCACAACG+TGG | - | chr2.3:70601784-70601803 | None:intergenic | 45.0% | |
TGAAGGAGAGATGGAACATG+TGG | + | chr2.3:70602476-70602495 | MS.gene047334:CDS | 45.0% | |
TTGGGGAATGGAAGTGAGAA+AGG | + | chr2.3:70602441-70602460 | MS.gene047334:CDS | 45.0% | |
! | TTGGAGTAGGCTTTTCATCC+GGG | + | chr2.3:70602199-70602218 | MS.gene047334:CDS | 45.0% |
!! | GTGGTGTTTGGTTTGGAAGT+AGG | - | chr2.3:70602021-70602040 | None:intergenic | 45.0% |
!! | TAGCAACACTTTTCAGGGCT+TGG | + | chr2.3:70602407-70602426 | MS.gene047334:CDS | 45.0% |
CTTCTGTAACCACCACCAAC+AGG | - | chr2.3:70601907-70601926 | None:intergenic | 50.0% | |
GGACAAGAGGTGGTACTCTT+AGG | + | chr2.3:70601875-70601894 | MS.gene047334:CDS | 50.0% | |
! | AGGAATGTTCCTGTTGGTGG+TGG | + | chr2.3:70601895-70601914 | MS.gene047334:CDS | 50.0% |
GGAGAGATGGAACATGTGGG+TGG | + | chr2.3:70602480-70602499 | MS.gene047334:CDS | 55.0% | |
GGCTTCGCTGGACGTAAACC+CGG | - | chr2.3:70602220-70602239 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.3 | gene | 70601724 | 70602617 | 70601724 | ID=MS.gene047334 |
chr2.3 | mRNA | 70601724 | 70602617 | 70601724 | ID=MS.gene047334.t1;Parent=MS.gene047334 |
chr2.3 | exon | 70601724 | 70602617 | 70601724 | ID=MS.gene047334.t1.exon1;Parent=MS.gene047334.t1 |
chr2.3 | CDS | 70601724 | 70602617 | 70601724 | ID=cds.MS.gene047334.t1;Parent=MS.gene047334.t1 |
Gene Sequence |
Protein sequence |