Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene047351.t1 | XP_003613728.2 | 87.2 | 351 | 38 | 3 | 1 | 349 | 1 | 346 | 3.00E-141 | 511.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene047351.t1 | Q8RWD7 | 38.1 | 113 | 63 | 3 | 22 | 132 | 64 | 171 | 2.7e-13 | 77.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene047351.t1 | G7KDV8 | 87.2 | 351 | 38 | 3 | 1 | 349 | 1 | 346 | 2.2e-141 | 511.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene047351.t1 | TR | Others |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene047351.t1 | MTR_7g039520 | 88.034 | 351 | 35 | 3 | 1 | 349 | 1 | 346 | 0.0 | 625 |
| MS.gene047351.t1 | MTR_5g040080 | 88.319 | 351 | 34 | 3 | 1 | 349 | 1 | 346 | 0.0 | 615 |
| MS.gene047351.t1 | MTR_2g014410 | 85.771 | 253 | 16 | 2 | 96 | 347 | 42 | 275 | 1.07e-144 | 412 |
| MS.gene047351.t1 | MTR_1g069015 | 33.099 | 142 | 81 | 6 | 1 | 132 | 1 | 138 | 1.54e-15 | 77.8 |
| MS.gene047351.t1 | MTR_1g069020 | 35.294 | 119 | 63 | 4 | 22 | 134 | 28 | 138 | 1.99e-14 | 74.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene047351.t1 | AT1G58210 | 38.053 | 113 | 63 | 3 | 22 | 132 | 64 | 171 | 1.23e-17 | 82.4 |
Find 73 sgRNAs with CRISPR-Local
Find 106 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCACTTTACGTAAAGAAAT+TGG | 0.221596 | 2.3:+70397766 | MS.gene047351:CDS |
| CCTTGTGGTCACTTGATAAT+TGG | 0.239096 | 2.3:-70397796 | None:intergenic |
| GTGTGGTGGTGGAACGTATT+GGG | 0.250160 | 2.3:-70396576 | None:intergenic |
| GGTGGAACGTATTGGGGTTT+TGG | 0.271264 | 2.3:-70396569 | None:intergenic |
| TCCAATTTCTTTACGTAAAG+TGG | 0.301497 | 2.3:-70397767 | None:intergenic |
| GTGATTTATAATGGTGAAAA+TGG | 0.304153 | 2.3:+70397443 | MS.gene047351:CDS |
| CAGTTGGATTTCCACACAAT+TGG | 0.315477 | 2.3:+70397249 | MS.gene047351:CDS |
| GTGATTTCTAATGGTGAAAA+TGG | 0.338731 | 2.3:+70397653 | MS.gene047351:CDS |
| GCCTCACATACATCTCAAAA+TGG | 0.350427 | 2.3:+70396990 | MS.gene047351:CDS |
| GTTGGAGAGGGGTGTGGTGG+TGG | 0.351038 | 2.3:-70396587 | None:intergenic |
| TGTGGTGGTGGAACGTATTG+GGG | 0.352785 | 2.3:-70396575 | None:intergenic |
| CAAGTTGGCGTGATTTATAA+TGG | 0.357302 | 2.3:+70397434 | MS.gene047351:CDS |
| TGCAAGGGTTTAGCTCTTGC+TGG | 0.372413 | 2.3:+70396765 | MS.gene047351:CDS |
| GGTGTGGTGGTGGAACGTAT+TGG | 0.373524 | 2.3:-70396577 | None:intergenic |
| AATTATTCAGCTCATAGTTC+AGG | 0.376079 | 2.3:+70397275 | MS.gene047351:CDS |
| GCTAAACCCTTGCATTGGTT+TGG | 0.379957 | 2.3:-70396756 | None:intergenic |
| AGCAGCTGATGAAACTTTGC+AGG | 0.381501 | 2.3:+70397508 | MS.gene047351:CDS |
| AAGTCACATGATGCTTATAA+AGG | 0.387819 | 2.3:+70397901 | MS.gene047351:CDS |
| TGAAACTTTGCAGGAAGATA+TGG | 0.392140 | 2.3:+70397517 | MS.gene047351:CDS |
| TCTTGCTGGCATTGCTTCAA+TGG | 0.402134 | 2.3:+70396779 | MS.gene047351:CDS |
| ATACCGGTAACTTGTGTAGT+AGG | 0.407561 | 2.3:+70397852 | MS.gene047351:CDS |
| ACAACAATATTGCGAGTCTA+AGG | 0.409478 | 2.3:+70397399 | MS.gene047351:CDS |
| CAGGTTGCCGTGATTTCTAA+TGG | 0.414513 | 2.3:+70397644 | MS.gene047351:CDS |
| CACCCTACTACACAAGTTAC+CGG | 0.426920 | 2.3:-70397855 | None:intergenic |
| CCCATGAGCCAGGCAGTGTT+AGG | 0.434002 | 2.3:+70397741 | MS.gene047351:CDS |
| TTTGAAGATTGAGTTGGAGA+GGG | 0.438182 | 2.3:-70396599 | None:intergenic |
| GGGTCTTGAGTTGTCTCAAC+AGG | 0.439702 | 2.3:+70397565 | MS.gene047351:CDS |
| GAACACGTGGATAAAGTTAC+TGG | 0.442596 | 2.3:+70397308 | MS.gene047351:CDS |
| AAACCCTTGCATTGGTTTGG+AGG | 0.442882 | 2.3:-70396753 | None:intergenic |
| ATCTTGAGTCTCTACAACAT+TGG | 0.448912 | 2.3:-70396934 | None:intergenic |
| GCAATGTTGTCATTACCTTC+AGG | 0.449864 | 2.3:-70397542 | None:intergenic |
| GAAGGTAATGACAACATTGC+GGG | 0.450334 | 2.3:+70397545 | MS.gene047351:CDS |
| CACATGATGCTTATAAAGGA+TGG | 0.459002 | 2.3:+70397905 | MS.gene047351:CDS |
| TTTAGATTTGAAGATTGAGT+TGG | 0.459049 | 2.3:-70396605 | None:intergenic |
| TCTTGAGTCTCTACAACATT+GGG | 0.460912 | 2.3:-70396933 | None:intergenic |
| CTTCTGTTAGAAGATCTACC+AGG | 0.478887 | 2.3:+70397951 | MS.gene047351:CDS |
| ACCTAACACTGCCTGGCTCA+TGG | 0.480484 | 2.3:-70397742 | None:intergenic |
| GCAATGTTGTCATTACCTTC+CGG | 0.481010 | 2.3:-70397599 | None:intergenic |
| TGAGTTGGAGAGGGGTGTGG+TGG | 0.489080 | 2.3:-70396590 | None:intergenic |
| ATTTGAAGATTGAGTTGGAG+AGG | 0.496033 | 2.3:-70396600 | None:intergenic |
| TTATGTCGCCGTTTCTCAGT+TGG | 0.496930 | 2.3:+70397233 | MS.gene047351:CDS |
| TGATACATTTCTTATCCTTG+TGG | 0.504839 | 2.3:-70397811 | None:intergenic |
| GTTGTCTCAACAGGAAGATA+TGG | 0.506535 | 2.3:+70397574 | MS.gene047351:CDS |
| GATTGAGTTGGAGAGGGGTG+TGG | 0.509260 | 2.3:-70396593 | None:intergenic |
| TTGAAGATTGAGTTGGAGAG+GGG | 0.510736 | 2.3:-70396598 | None:intergenic |
| TCTTGATTTGTCTCAACCGC+AGG | 0.523290 | 2.3:+70397625 | MS.gene047351:CDS |
| CCTAACACTGCCTGGCTCAT+GGG | 0.526114 | 2.3:-70397741 | None:intergenic |
| CAAGAGCTAAACCCTTGCAT+TGG | 0.528805 | 2.3:-70396761 | None:intergenic |
| TCAACAGGAAGATATGGAAC+CGG | 0.540435 | 2.3:+70397580 | MS.gene047351:CDS |
| TTTGATCCTACCCATGAGCC+AGG | 0.541769 | 2.3:+70397731 | MS.gene047351:CDS |
| AAGAAGAATGTAGATGATAC+CGG | 0.549093 | 2.3:+70397836 | MS.gene047351:CDS |
| AGTGGAGACCTAACACTGCC+TGG | 0.549411 | 2.3:-70397749 | None:intergenic |
| GTGGAAATCCAACTGAGAAA+CGG | 0.556021 | 2.3:-70397241 | None:intergenic |
| ACATGATGCTTATAAAGGAT+GGG | 0.566978 | 2.3:+70397906 | MS.gene047351:CDS |
| GGCATCACTGTAATGTTCCA+CGG | 0.577101 | 2.3:+70396957 | MS.gene047351:CDS |
| TTATAAATCACGCCAACTTG+AGG | 0.591187 | 2.3:-70397431 | None:intergenic |
| TACCGGTAACTTGTGTAGTA+GGG | 0.605302 | 2.3:+70397853 | MS.gene047351:CDS |
| GAAACCTCCAAACCAATGCA+AGG | 0.605866 | 2.3:+70396749 | MS.gene047351:CDS |
| ACACTGCCTGGCTCATGGGT+AGG | 0.608929 | 2.3:-70397737 | None:intergenic |
| CCAATTATCAAGTGACCACA+AGG | 0.618748 | 2.3:+70397796 | MS.gene047351:CDS |
| CAGGAAGATATGGAACCTGA+AGG | 0.622434 | 2.3:+70397527 | MS.gene047351:CDS |
| AAACCTCCAAACCAATGCAA+GGG | 0.637222 | 2.3:+70396750 | MS.gene047351:CDS |
| AGGTTGTCTCAACCTCAAGT+TGG | 0.639538 | 2.3:+70397419 | MS.gene047351:CDS |
| GTTACCTTCAGCTTCCTGTG+AGG | 0.642766 | 2.3:-70397378 | None:intergenic |
| GAGACCTCACAGGAAGCTGA+AGG | 0.643008 | 2.3:+70397374 | MS.gene047351:CDS |
| AACAGCTGATGAGACCTCAC+AGG | 0.646895 | 2.3:+70397364 | MS.gene047351:CDS |
| AATGTTGTAGAGACTCAAGA+TGG | 0.656225 | 2.3:+70396936 | MS.gene047351:CDS |
| CAGGAAGATATGGAACCGGA+AGG | 0.662654 | 2.3:+70397584 | MS.gene047351:CDS |
| AGGAAATGAATGTGAACACG+TGG | 0.663886 | 2.3:+70397295 | MS.gene047351:CDS |
| TTCTGTTAGAAGATCTACCA+GGG | 0.673391 | 2.3:+70397952 | MS.gene047351:CDS |
| TTAGAAATCACGGCAACCTG+CGG | 0.679371 | 2.3:-70397641 | None:intergenic |
| TGAAGGTAATGACAACATTG+CGG | 0.680073 | 2.3:+70397544 | MS.gene047351:CDS |
| GTGAGGCGTTAATCAAACCG+TGG | 0.715788 | 2.3:-70396974 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCTAATTGGTTATTTGTTT+GGG | + | chr2.3:70396832-70396851 | MS.gene047351:intron | 20.0% |
| !! | TTGAATATAATTAGTGTGTT+TGG | + | chr2.3:70397108-70397127 | MS.gene047351:intron | 20.0% |
| !! | TTTCTAATTGGTTATTTGTT+TGG | + | chr2.3:70396831-70396850 | MS.gene047351:intron | 20.0% |
| !!! | TTTTTTATAATTTAGTACCC+TGG | - | chr2.3:70397972-70397991 | None:intergenic | 20.0% |
| !!! | TTTTTTCATTTTCACTTTGT+AGG | + | chr2.3:70396808-70396827 | MS.gene047351:intron | 20.0% |
| ! | AAGAGAAATGAGAAAGAAAA+AGG | - | chr2.3:70397038-70397057 | None:intergenic | 25.0% |
| ! | AGAGAAATGAGAAAGAAAAA+GGG | - | chr2.3:70397037-70397056 | None:intergenic | 25.0% |
| ! | GTGATTTATAATGGTGAAAA+TGG | + | chr2.3:70397443-70397462 | MS.gene047351:CDS | 25.0% |
| ! | TTTAGATTTGAAGATTGAGT+TGG | - | chr2.3:70396608-70396627 | None:intergenic | 25.0% |
| !! | ATTTTCACCATTAGAAATCA+CGG | - | chr2.3:70397654-70397673 | None:intergenic | 25.0% |
| !! | GAATAATTTTTCCAATTGTG+TGG | - | chr2.3:70397263-70397282 | None:intergenic | 25.0% |
| AAGAAGAATGTAGATGATAC+CGG | + | chr2.3:70397836-70397855 | MS.gene047351:CDS | 30.0% | |
| AAGTCACATGATGCTTATAA+AGG | + | chr2.3:70397901-70397920 | MS.gene047351:CDS | 30.0% | |
| AATTATTCAGCTCATAGTTC+AGG | + | chr2.3:70397275-70397294 | MS.gene047351:CDS | 30.0% | |
| ACATGATGCTTATAAAGGAT+GGG | + | chr2.3:70397906-70397925 | MS.gene047351:CDS | 30.0% | |
| ATCTGCAAAAATAAGCAAGT+AGG | - | chr2.3:70396705-70396724 | None:intergenic | 30.0% | |
| GTGATTTCTAATGGTGAAAA+TGG | + | chr2.3:70397653-70397672 | MS.gene047351:CDS | 30.0% | |
| TCACTTTGTAGGTTTCTAAT+TGG | + | chr2.3:70396819-70396838 | MS.gene047351:intron | 30.0% | |
| TCCAATTTCTTTACGTAAAG+TGG | - | chr2.3:70397770-70397789 | None:intergenic | 30.0% | |
| TCCACTTTACGTAAAGAAAT+TGG | + | chr2.3:70397766-70397785 | MS.gene047351:CDS | 30.0% | |
| TGATACATTTCTTATCCTTG+TGG | - | chr2.3:70397814-70397833 | None:intergenic | 30.0% | |
| ! | AGATTTTCTTACATGAATGG+TGG | + | chr2.3:70396721-70396740 | MS.gene047351:intron | 30.0% |
| ! | TCAAAATGGTTTTTCTTCTG+AGG | + | chr2.3:70397004-70397023 | MS.gene047351:CDS | 30.0% |
| ! | TGCAGATTTTCTTACATGAA+TGG | + | chr2.3:70396718-70396737 | MS.gene047351:intron | 30.0% |
| AAACAAGAGAGAAGAGTGAA+TGG | - | chr2.3:70396641-70396660 | None:intergenic | 35.0% | |
| AACAAGAGAGAAGAGTGAAT+GGG | - | chr2.3:70396640-70396659 | None:intergenic | 35.0% | |
| AATGTTGTAGAGACTCAAGA+TGG | + | chr2.3:70396936-70396955 | MS.gene047351:CDS | 35.0% | |
| ACAACAATATTGCGAGTCTA+AGG | + | chr2.3:70397399-70397418 | MS.gene047351:CDS | 35.0% | |
| ATCTTGAGTCTCTACAACAT+TGG | - | chr2.3:70396937-70396956 | None:intergenic | 35.0% | |
| CACATGATGCTTATAAAGGA+TGG | + | chr2.3:70397905-70397924 | MS.gene047351:CDS | 35.0% | |
| TCTTGAGTCTCTACAACATT+GGG | - | chr2.3:70396936-70396955 | None:intergenic | 35.0% | |
| TGAAACTTTGCAGGAAGATA+TGG | + | chr2.3:70397517-70397536 | MS.gene047351:CDS | 35.0% | |
| TGAAGGTAATGACAACATTG+CGG | + | chr2.3:70397544-70397563 | MS.gene047351:CDS | 35.0% | |
| TTATAAATCACGCCAACTTG+AGG | - | chr2.3:70397434-70397453 | None:intergenic | 35.0% | |
| TTCTGTTAGAAGATCTACCA+GGG | + | chr2.3:70397952-70397971 | MS.gene047351:CDS | 35.0% | |
| ! | AAGCATCATGTGACTTTTCT+TGG | - | chr2.3:70397897-70397916 | None:intergenic | 35.0% |
| ! | CAAGTTGGCGTGATTTATAA+TGG | + | chr2.3:70397434-70397453 | MS.gene047351:CDS | 35.0% |
| !! | AAATGGTTTTTCTTCTGAGG+TGG | + | chr2.3:70397007-70397026 | MS.gene047351:intron | 35.0% |
| !! | ATTTGAAGATTGAGTTGGAG+AGG | - | chr2.3:70396603-70396622 | None:intergenic | 35.0% |
| !! | TTTGAAGATTGAGTTGGAGA+GGG | - | chr2.3:70396602-70396621 | None:intergenic | 35.0% |
| !!! | AATGGTTTTTCTTCTGAGGT+GGG | + | chr2.3:70397008-70397027 | MS.gene047351:intron | 35.0% |
| !!! | ACCATTTTGAGATGTATGTG+AGG | - | chr2.3:70396994-70397013 | None:intergenic | 35.0% |
| !!! | CTCATCAGCTGTTTTTTTGT+GGG | - | chr2.3:70397357-70397376 | None:intergenic | 35.0% |
| !!! | TCTCATCAGCTGTTTTTTTG+TGG | - | chr2.3:70397358-70397377 | None:intergenic | 35.0% |
| !!! | TTCATCAGCTGCTTTTTTGT+GGG | - | chr2.3:70397501-70397520 | None:intergenic | 35.0% |
| !!! | TTTCATCAGCTGCTTTTTTG+TGG | - | chr2.3:70397502-70397521 | None:intergenic | 35.0% |
| AAACCTCCAAACCAATGCAA+GGG | + | chr2.3:70396750-70396769 | MS.gene047351:CDS | 40.0% | |
| AGGAAATGAATGTGAACACG+TGG | + | chr2.3:70397295-70397314 | MS.gene047351:CDS | 40.0% | |
| CAGTTGGATTTCCACACAAT+TGG | + | chr2.3:70397249-70397268 | MS.gene047351:CDS | 40.0% | |
| CCAATTATCAAGTGACCACA+AGG | + | chr2.3:70397796-70397815 | MS.gene047351:CDS | 40.0% | |
| CTTCTGTTAGAAGATCTACC+AGG | + | chr2.3:70397951-70397970 | MS.gene047351:CDS | 40.0% | |
| GAACACGTGGATAAAGTTAC+TGG | + | chr2.3:70397308-70397327 | MS.gene047351:CDS | 40.0% | |
| GAAGGTAATGACAACATTGC+GGG | + | chr2.3:70397545-70397564 | MS.gene047351:CDS | 40.0% | |
| GCAATGTTGTCATTACCTTC+AGG | - | chr2.3:70397545-70397564 | None:intergenic | 40.0% | |
| GCAATGTTGTCATTACCTTC+CGG | - | chr2.3:70397545-70397564 | None:intergenic | 40.0% | |
| GCCTCACATACATCTCAAAA+TGG | + | chr2.3:70396990-70397009 | MS.gene047351:CDS | 40.0% | |
| GTGGAAATCCAACTGAGAAA+CGG | - | chr2.3:70397244-70397263 | None:intergenic | 40.0% | |
| GTTGTCTCAACAGGAAGATA+TGG | + | chr2.3:70397574-70397593 | MS.gene047351:CDS | 40.0% | |
| TCAACAGGAAGATATGGAAC+CGG | + | chr2.3:70397580-70397599 | MS.gene047351:CDS | 40.0% | |
| TGAGAGTCATGTGGCAAAAA+TGG | + | chr2.3:70397137-70397156 | MS.gene047351:intron | 40.0% | |
| TTGTGACTATTGATGCATGC+AGG | + | chr2.3:70396865-70396884 | MS.gene047351:intron | 40.0% | |
| ! | ATACCGGTAACTTGTGTAGT+AGG | + | chr2.3:70397852-70397871 | MS.gene047351:CDS | 40.0% |
| ! | CCTTGTGGTCACTTGATAAT+TGG | - | chr2.3:70397799-70397818 | None:intergenic | 40.0% |
| ! | TACCGGTAACTTGTGTAGTA+GGG | + | chr2.3:70397853-70397872 | MS.gene047351:CDS | 40.0% |
| !! | TTGAAGATTGAGTTGGAGAG+GGG | - | chr2.3:70396601-70396620 | None:intergenic | 40.0% |
| AGCAGCTGATGAAACTTTGC+AGG | + | chr2.3:70397508-70397527 | MS.gene047351:CDS | 45.0% | |
| AGGTTGTCTCAACCTCAAGT+TGG | + | chr2.3:70397419-70397438 | MS.gene047351:CDS | 45.0% | |
| AGTACAATCAAACGAGCCCA+GGG | - | chr2.3:70397068-70397087 | None:intergenic | 45.0% | |
| ATTTCTCTTGACCCATCCCT+GGG | + | chr2.3:70397049-70397068 | MS.gene047351:intron | 45.0% | |
| CAAGAGCTAAACCCTTGCAT+TGG | - | chr2.3:70396764-70396783 | None:intergenic | 45.0% | |
| CACCCTACTACACAAGTTAC+CGG | - | chr2.3:70397858-70397877 | None:intergenic | 45.0% | |
| CAGGAAGATATGGAACCTGA+AGG | + | chr2.3:70397527-70397546 | MS.gene047351:CDS | 45.0% | |
| CAGGTTGCCGTGATTTCTAA+TGG | + | chr2.3:70397644-70397663 | MS.gene047351:CDS | 45.0% | |
| GAAACCTCCAAACCAATGCA+AGG | + | chr2.3:70396749-70396768 | MS.gene047351:CDS | 45.0% | |
| GGCATCACTGTAATGTTCCA+CGG | + | chr2.3:70396957-70396976 | MS.gene047351:CDS | 45.0% | |
| TAGTACAATCAAACGAGCCC+AGG | - | chr2.3:70397069-70397088 | None:intergenic | 45.0% | |
| TCTTGCTGGCATTGCTTCAA+TGG | + | chr2.3:70396779-70396798 | MS.gene047351:CDS | 45.0% | |
| TGGTTATGCTGAGAGTCATG+TGG | + | chr2.3:70397128-70397147 | MS.gene047351:intron | 45.0% | |
| TTAGAAATCACGGCAACCTG+CGG | - | chr2.3:70397644-70397663 | None:intergenic | 45.0% | |
| TTATGTCGCCGTTTCTCAGT+TGG | + | chr2.3:70397233-70397252 | MS.gene047351:CDS | 45.0% | |
| !! | AAACCCTTGCATTGGTTTGG+AGG | - | chr2.3:70396756-70396775 | None:intergenic | 45.0% |
| !! | GCTAAACCCTTGCATTGGTT+TGG | - | chr2.3:70396759-70396778 | None:intergenic | 45.0% |
| !! | TCTTGATTTGTCTCAACCGC+AGG | + | chr2.3:70397625-70397644 | MS.gene047351:CDS | 45.0% |
| AACAGCTGATGAGACCTCAC+AGG | + | chr2.3:70397364-70397383 | MS.gene047351:CDS | 50.0% | |
| AATCAAACGAGCCCAGGGAT+GGG | - | chr2.3:70397063-70397082 | None:intergenic | 50.0% | |
| CAGGAAGATATGGAACCGGA+AGG | + | chr2.3:70397584-70397603 | MS.gene047351:CDS | 50.0% | |
| CATTTCTCTTGACCCATCCC+TGG | + | chr2.3:70397048-70397067 | MS.gene047351:intron | 50.0% | |
| GTTACCTTCAGCTTCCTGTG+AGG | - | chr2.3:70397381-70397400 | None:intergenic | 50.0% | |
| TTTGATCCTACCCATGAGCC+AGG | + | chr2.3:70397731-70397750 | MS.gene047351:CDS | 50.0% | |
| ! | GGGTCTTGAGTTGTCTCAAC+AGG | + | chr2.3:70397565-70397584 | MS.gene047351:CDS | 50.0% |
| ! | GGTGGAACGTATTGGGGTTT+TGG | - | chr2.3:70396572-70396591 | None:intergenic | 50.0% |
| ! | GTGAGGCGTTAATCAAACCG+TGG | - | chr2.3:70396977-70396996 | None:intergenic | 50.0% |
| !! | GTGTGGTGGTGGAACGTATT+GGG | - | chr2.3:70396579-70396598 | None:intergenic | 50.0% |
| !! | TGCAAGGGTTTAGCTCTTGC+TGG | + | chr2.3:70396765-70396784 | MS.gene047351:CDS | 50.0% |
| !! | TGTGGTGGTGGAACGTATTG+GGG | - | chr2.3:70396578-70396597 | None:intergenic | 50.0% |
| ACCTAACACTGCCTGGCTCA+TGG | - | chr2.3:70397745-70397764 | None:intergenic | 55.0% | |
| AGTGGAGACCTAACACTGCC+TGG | - | chr2.3:70397752-70397771 | None:intergenic | 55.0% | |
| CAATCAAACGAGCCCAGGGA+TGG | - | chr2.3:70397064-70397083 | None:intergenic | 55.0% | |
| CCTAACACTGCCTGGCTCAT+GGG | - | chr2.3:70397744-70397763 | None:intergenic | 55.0% | |
| GAGACCTCACAGGAAGCTGA+AGG | + | chr2.3:70397374-70397393 | MS.gene047351:CDS | 55.0% | |
| !! | GATTGAGTTGGAGAGGGGTG+TGG | - | chr2.3:70396596-70396615 | None:intergenic | 55.0% |
| !! | GGTGTGGTGGTGGAACGTAT+TGG | - | chr2.3:70396580-70396599 | None:intergenic | 55.0% |
| ACACTGCCTGGCTCATGGGT+AGG | - | chr2.3:70397740-70397759 | None:intergenic | 60.0% | |
| CCCATGAGCCAGGCAGTGTT+AGG | + | chr2.3:70397741-70397760 | MS.gene047351:CDS | 60.0% | |
| ! | TGAGTTGGAGAGGGGTGTGG+TGG | - | chr2.3:70396593-70396612 | None:intergenic | 60.0% |
| ! | GTTGGAGAGGGGTGTGGTGG+TGG | - | chr2.3:70396590-70396609 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 70396562 | 70397994 | 70396562 | ID=MS.gene047351 |
| chr2.3 | mRNA | 70396562 | 70397994 | 70396562 | ID=MS.gene047351.t1;Parent=MS.gene047351 |
| chr2.3 | exon | 70396562 | 70396630 | 70396562 | ID=MS.gene047351.t1.exon1;Parent=MS.gene047351.t1 |
| chr2.3 | CDS | 70396562 | 70396630 | 70396562 | ID=cds.MS.gene047351.t1;Parent=MS.gene047351.t1 |
| chr2.3 | exon | 70396723 | 70396802 | 70396723 | ID=MS.gene047351.t1.exon2;Parent=MS.gene047351.t1 |
| chr2.3 | CDS | 70396723 | 70396802 | 70396723 | ID=cds.MS.gene047351.t1;Parent=MS.gene047351.t1 |
| chr2.3 | exon | 70396887 | 70397025 | 70396887 | ID=MS.gene047351.t1.exon3;Parent=MS.gene047351.t1 |
| chr2.3 | CDS | 70396887 | 70397025 | 70396887 | ID=cds.MS.gene047351.t1;Parent=MS.gene047351.t1 |
| chr2.3 | exon | 70397233 | 70397994 | 70397233 | ID=MS.gene047351.t1.exon4;Parent=MS.gene047351.t1 |
| chr2.3 | CDS | 70397233 | 70397994 | 70397233 | ID=cds.MS.gene047351.t1;Parent=MS.gene047351.t1 |
| Gene Sequence |
| Protein sequence |