Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene047479.t1 | AAG27464.1 | 99.2 | 257 | 2 | 0 | 159 | 415 | 125 | 381 | 2.90E-143 | 518.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene047479.t1 | P46608 | 87.6 | 259 | 26 | 5 | 159 | 415 | 125 | 379 | 5.8e-124 | 445.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene047479.t1 | A5Y4G6 | 99.2 | 257 | 2 | 0 | 159 | 415 | 118 | 374 | 2.1e-143 | 518.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene047479.t1 | TF | HB-KNOX |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene047479.t1 | MTR_2g024390 | 97.333 | 375 | 5 | 3 | 41 | 415 | 5 | 374 | 0.0 | 756 |
MS.gene047479.t1 | MTR_5g085860 | 60.854 | 281 | 95 | 4 | 140 | 415 | 28 | 298 | 2.94e-103 | 308 |
MS.gene047479.t1 | MTR_1g017080 | 58.039 | 255 | 93 | 3 | 155 | 399 | 116 | 366 | 9.74e-90 | 276 |
MS.gene047479.t1 | MTR_5g033720 | 54.812 | 239 | 106 | 1 | 154 | 390 | 68 | 306 | 1.52e-82 | 256 |
MS.gene047479.t1 | MTR_1g084060 | 49.402 | 251 | 107 | 5 | 153 | 390 | 14 | 257 | 6.49e-67 | 214 |
MS.gene047479.t1 | MTR_1g084060 | 49.402 | 251 | 107 | 5 | 153 | 390 | 14 | 257 | 1.70e-66 | 214 |
MS.gene047479.t1 | MTR_1g012960 | 31.890 | 254 | 132 | 6 | 159 | 378 | 174 | 420 | 1.44e-36 | 139 |
MS.gene047479.t1 | MTR_2g461240 | 30.739 | 257 | 149 | 6 | 149 | 378 | 85 | 339 | 1.01e-35 | 135 |
MS.gene047479.t1 | MTR_4g116545 | 30.108 | 279 | 168 | 6 | 126 | 378 | 38 | 315 | 8.95e-35 | 132 |
MS.gene047479.t1 | MTR_4g116545 | 30.108 | 279 | 168 | 6 | 126 | 378 | 38 | 315 | 9.23e-35 | 131 |
MS.gene047479.t1 | MTR_3g106400 | 31.600 | 250 | 140 | 6 | 159 | 378 | 107 | 355 | 9.32e-35 | 132 |
MS.gene047479.t1 | MTR_3g106400 | 31.600 | 250 | 140 | 6 | 159 | 378 | 107 | 355 | 9.67e-35 | 132 |
MS.gene047479.t1 | MTR_3g106400 | 29.197 | 274 | 163 | 6 | 159 | 402 | 107 | 379 | 2.04e-34 | 132 |
MS.gene047479.t1 | MTR_5g011070 | 28.516 | 256 | 142 | 5 | 158 | 378 | 27 | 276 | 2.97e-29 | 116 |
MS.gene047479.t1 | MTR_4g019450 | 42.667 | 75 | 43 | 0 | 306 | 380 | 347 | 421 | 4.12e-12 | 68.2 |
MS.gene047479.t1 | MTR_3g112300 | 39.535 | 86 | 46 | 2 | 295 | 380 | 327 | 406 | 9.25e-12 | 67.4 |
MS.gene047479.t1 | MTR_3g112300 | 39.535 | 86 | 46 | 2 | 295 | 380 | 327 | 406 | 9.34e-12 | 67.0 |
MS.gene047479.t1 | MTR_7g065050 | 41.096 | 73 | 41 | 1 | 308 | 380 | 296 | 366 | 9.92e-12 | 67.0 |
MS.gene047479.t1 | MTR_8g078480 | 39.560 | 91 | 50 | 3 | 297 | 384 | 554 | 642 | 1.72e-11 | 66.6 |
MS.gene047479.t1 | MTR_1g023050 | 39.535 | 86 | 46 | 2 | 295 | 380 | 338 | 417 | 1.81e-11 | 66.2 |
MS.gene047479.t1 | MTR_3g112290 | 42.254 | 71 | 41 | 0 | 310 | 380 | 339 | 409 | 3.05e-11 | 65.1 |
MS.gene047479.t1 | MTR_4g051532 | 46.667 | 60 | 32 | 0 | 321 | 380 | 404 | 463 | 4.14e-11 | 65.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene047479.t1 | AT1G62360 | 79.087 | 263 | 49 | 5 | 158 | 415 | 121 | 382 | 1.80e-132 | 386 |
MS.gene047479.t1 | AT4G08150 | 51.090 | 321 | 127 | 9 | 102 | 399 | 72 | 385 | 7.17e-90 | 278 |
MS.gene047479.t1 | AT1G23380 | 49.609 | 256 | 109 | 3 | 154 | 399 | 81 | 326 | 2.67e-80 | 251 |
MS.gene047479.t1 | AT1G70510 | 50.410 | 244 | 121 | 0 | 154 | 397 | 65 | 308 | 5.39e-80 | 249 |
MS.gene047479.t1 | AT1G23380 | 49.225 | 258 | 109 | 4 | 154 | 399 | 81 | 328 | 2.48e-78 | 246 |
MS.gene047479.t1 | AT1G70510 | 49.597 | 248 | 121 | 1 | 154 | 397 | 65 | 312 | 1.08e-77 | 243 |
MS.gene047479.t1 | AT4G32040 | 27.424 | 361 | 221 | 6 | 57 | 378 | 4 | 362 | 4.96e-42 | 152 |
MS.gene047479.t1 | AT4G32040 | 27.424 | 361 | 221 | 6 | 57 | 378 | 4 | 362 | 5.55e-42 | 152 |
MS.gene047479.t1 | AT5G25220 | 30.970 | 268 | 154 | 6 | 141 | 378 | 137 | 403 | 7.71e-40 | 147 |
MS.gene047479.t1 | AT5G25220 | 30.970 | 268 | 154 | 6 | 141 | 378 | 137 | 403 | 9.76e-40 | 147 |
MS.gene047479.t1 | AT5G11060 | 31.020 | 245 | 143 | 6 | 159 | 378 | 124 | 367 | 1.98e-35 | 135 |
MS.gene047479.t1 | AT1G62990 | 30.924 | 249 | 142 | 6 | 158 | 378 | 29 | 275 | 1.70e-31 | 122 |
MS.gene047479.t1 | AT1G75430 | 49.091 | 55 | 28 | 0 | 326 | 380 | 209 | 263 | 2.95e-11 | 64.3 |
MS.gene047479.t1 | AT5G02030 | 46.667 | 60 | 32 | 0 | 321 | 380 | 350 | 409 | 3.77e-11 | 65.5 |
MS.gene047479.t1 | AT1G19700 | 46.667 | 60 | 32 | 0 | 321 | 380 | 353 | 412 | 5.08e-11 | 64.7 |
MS.gene047479.t1 | AT1G19700 | 46.667 | 60 | 32 | 0 | 321 | 380 | 353 | 412 | 5.08e-11 | 64.7 |
MS.gene047479.t1 | AT1G19700 | 46.667 | 60 | 32 | 0 | 321 | 380 | 353 | 412 | 5.08e-11 | 64.7 |
MS.gene047479.t1 | AT1G19700 | 46.667 | 60 | 32 | 0 | 321 | 380 | 353 | 412 | 5.08e-11 | 64.7 |
MS.gene047479.t1 | AT1G19700 | 46.667 | 60 | 32 | 0 | 321 | 380 | 353 | 412 | 5.08e-11 | 64.7 |
MS.gene047479.t1 | AT4G36870 | 39.024 | 82 | 46 | 2 | 301 | 380 | 480 | 559 | 8.18e-11 | 64.3 |
MS.gene047479.t1 | AT4G36870 | 39.024 | 82 | 46 | 2 | 301 | 380 | 480 | 559 | 8.18e-11 | 64.3 |
Find 85 sgRNAs with CRISPR-Local
Find 368 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTATTATTGTTAGTGGAATT+AGG | 0.210507 | 2.4:-63200434 | None:intergenic |
AGAACTTTCCAAACCCTTAA+AGG | 0.230018 | 2.4:+63201099 | MS.gene047479:CDS |
ATTAGTATTGTTGTGGTTAT+TGG | 0.247015 | 2.4:-63200378 | None:intergenic |
TCTTATGTGATGGGTGCTTT+TGG | 0.272814 | 2.4:+63200269 | MS.gene047479:CDS |
AGCAGAAGACAGGGAATTAA+AGG | 0.275275 | 2.4:+63204528 | MS.gene047479:CDS |
CATAGCTTCCTTTAAGGGTT+TGG | 0.275443 | 2.4:-63201107 | None:intergenic |
AATTGTTGCCTTGCCTCTTT+TGG | 0.282916 | 2.4:-63204631 | None:intergenic |
TTGTGGTTATTGGAATTTAT+TGG | 0.285636 | 2.4:-63200368 | None:intergenic |
TGGTTTAGGTTACTATTTCA+TGG | 0.291622 | 2.4:+63200526 | MS.gene047479:CDS |
CATCAAAACACTCCTGGTTT+AGG | 0.312805 | 2.4:+63200512 | MS.gene047479:CDS |
AAAAGCATAGCTTCCTTTAA+GGG | 0.321776 | 2.4:-63201112 | None:intergenic |
TCTTCTTCTTCAGATAATAT+TGG | 0.323037 | 2.4:+63201175 | MS.gene047479:CDS |
TATTATTGTTAGTGGAATTA+GGG | 0.324374 | 2.4:-63200433 | None:intergenic |
TTCTTCTTATTCTTATGTGA+TGG | 0.373753 | 2.4:+63200259 | MS.gene047479:CDS |
GCAGTTGGATCAGGTTGTTT+AGG | 0.376419 | 2.4:+63201013 | MS.gene047479:CDS |
GTGATTGTTATTATTGTTAG+TGG | 0.377361 | 2.4:-63200441 | None:intergenic |
ATCAGTGGCAGTGCAGAAAA+AGG | 0.384116 | 2.4:+63199634 | MS.gene047479:CDS |
TCAATGGAGGGTAGTTCTAA+TGG | 0.389732 | 2.4:+63200233 | MS.gene047479:intron |
ATCAGAAGCAAATAAACAAC+TGG | 0.411205 | 2.4:+63205528 | MS.gene047479:CDS |
TCTTCTTATTCTTATGTGAT+GGG | 0.426756 | 2.4:+63200260 | MS.gene047479:CDS |
CAAGGCAACAATTGCTTGAA+TGG | 0.428670 | 2.4:+63204641 | MS.gene047479:CDS |
AACCTTGCCACCACTTCACT+TGG | 0.434594 | 2.4:-63200950 | None:intergenic |
TCCAGCTCTAGATCAGTTCA+TGG | 0.439689 | 2.4:+63201042 | MS.gene047479:CDS |
GTGAGGATGAGCCATGATCT+TGG | 0.442354 | 2.4:-63200606 | None:intergenic |
AAGAAGAAGAAGAGCTTCCA+TGG | 0.445455 | 2.4:-63200562 | None:intergenic |
AATTCCCTGTCTTCTGCTTG+AGG | 0.446914 | 2.4:-63204523 | None:intergenic |
AGAGGTGTTGTTATTACAGT+TGG | 0.455218 | 2.4:-63200468 | None:intergenic |
AGCAAGAGTTTATGAAGAAA+AGG | 0.455849 | 2.4:+63204593 | MS.gene047479:CDS |
AGAAAATACAGTGGATACTT+AGG | 0.456169 | 2.4:+63204562 | MS.gene047479:CDS |
ACTAAAGGCATCATCATCAT+TGG | 0.476116 | 2.4:-63200317 | None:intergenic |
TCCTCACTATCACCGTCTCT+TGG | 0.481181 | 2.4:+63200622 | MS.gene047479:CDS |
TTCAGAGGACATGCAGTTTG+TGG | 0.481599 | 2.4:+63205583 | MS.gene047479:CDS |
TAGATCCTCAAGCAGAAGAC+AGG | 0.488640 | 2.4:+63204518 | MS.gene047479:CDS |
TTCTGTGAAATCCAAGATCA+TGG | 0.489126 | 2.4:+63200595 | MS.gene047479:CDS |
CTTGTAGTGAAGGTGGAGAT+AGG | 0.494451 | 2.4:+63204449 | MS.gene047479:CDS |
TCAATCAAAGGAAACGGCAC+TGG | 0.497928 | 2.4:+63205555 | MS.gene047479:CDS |
CTGGCTCTAGCAGAGTCAAC+AGG | 0.498247 | 2.4:+63205500 | MS.gene047479:CDS |
ATGTGCAACTGCAGTGAGAA+TGG | 0.501403 | 2.4:+63200982 | MS.gene047479:CDS |
ATTGTTAGTGGAATTAGGGA+TGG | 0.507470 | 2.4:-63200429 | None:intergenic |
GGTGGAGATGCAGTTGGATC+AGG | 0.509504 | 2.4:+63201004 | MS.gene047479:CDS |
GGACATGCAGTTTGTGGTGA+TGG | 0.522795 | 2.4:+63205589 | MS.gene047479:CDS |
GCAGAAGACAGGGAATTAAA+GGG | 0.524288 | 2.4:+63204529 | MS.gene047479:CDS |
AGCCTACATCAACTGTCAAA+AGG | 0.527463 | 2.4:+63200646 | MS.gene047479:CDS |
AAAAGGAAAGCTTCCAAAAG+AGG | 0.530019 | 2.4:+63204618 | MS.gene047479:CDS |
TAGTGGAATTAGGGATGGGA+AGG | 0.531021 | 2.4:-63200424 | None:intergenic |
GGTTTATCAATCAAAGGAAA+CGG | 0.544135 | 2.4:+63205549 | MS.gene047479:CDS |
AGTGAAGGTGGAGATAGGAA+TGG | 0.544711 | 2.4:+63204454 | MS.gene047479:CDS |
ATAACAGGAATCACAGAAGC+TGG | 0.544820 | 2.4:+63205481 | MS.gene047479:intron |
AATAACCATCAAAACACTCC+TGG | 0.547863 | 2.4:+63200506 | MS.gene047479:CDS |
TCCATGAACTGATCTAGAGC+TGG | 0.552608 | 2.4:-63201043 | None:intergenic |
TACTTCTTCATGTAACTGAC+TGG | 0.555243 | 2.4:+63199963 | MS.gene047479:CDS |
TTGTTAGTGGAATTAGGGAT+GGG | 0.555961 | 2.4:-63200428 | None:intergenic |
ATGTAATAGTGTGGATGACT+TGG | 0.557999 | 2.4:-63205614 | None:intergenic |
TGTTTGCATTAGTATTGTTG+TGG | 0.559213 | 2.4:-63200385 | None:intergenic |
ACAACTGGTTTATCAATCAA+AGG | 0.560044 | 2.4:+63205543 | MS.gene047479:CDS |
TTGTATGGCAGGGGTATCAG+TGG | 0.561037 | 2.4:+63199619 | None:intergenic |
CACCAAGTGAAGTGGTGGCA+AGG | 0.566973 | 2.4:+63200948 | MS.gene047479:CDS |
TGATGAGATGAAGTGACTAA+AGG | 0.572274 | 2.4:-63200332 | None:intergenic |
ATATGATCAGCTTGTAGTGA+AGG | 0.580233 | 2.4:+63204439 | MS.gene047479:intron |
AAAGGCATCATCATCATTGG+AGG | 0.581233 | 2.4:-63200314 | None:intergenic |
AAGTCATCCACACTATTACA+TGG | 0.581325 | 2.4:+63205616 | MS.gene047479:CDS |
CATGGTGTTAGATAGATCCA+TGG | 0.582210 | 2.4:-63205663 | None:intergenic |
TACATGAAGAAGTAGTGAAG+AGG | 0.589580 | 2.4:-63199954 | None:intergenic |
TGTGCAACTGCAGTGAGAAT+GGG | 0.589860 | 2.4:+63200983 | MS.gene047479:CDS |
GGTTGGAGCACCAAGTGAAG+TGG | 0.591898 | 2.4:+63200940 | MS.gene047479:intron |
TCTCAGCAATTCATATCCCA+TGG | 0.592615 | 2.4:+63205646 | MS.gene047479:CDS |
ACAAACTGCATGTCCTCTGA+AGG | 0.595663 | 2.4:-63205581 | None:intergenic |
TGATCAGCTTGTAGTGAAGG+TGG | 0.598391 | 2.4:+63204442 | MS.gene047479:intron |
GGCAACAATTGCTTGAATGG+TGG | 0.608396 | 2.4:+63204644 | MS.gene047479:CDS |
TCCAAGAGACGGTGATAGTG+AGG | 0.612274 | 2.4:-63200623 | None:intergenic |
TGGAGCACCAAGTGAAGTGG+TGG | 0.614555 | 2.4:+63200943 | MS.gene047479:CDS |
ACTAATGCAAACAACATAAG+CGG | 0.624162 | 2.4:+63200395 | MS.gene047479:CDS |
GAAAGCTTCCAAAAGAGGCA+AGG | 0.624760 | 2.4:+63204623 | MS.gene047479:CDS |
TGATGTAGGCTTCCAAGAGA+CGG | 0.625494 | 2.4:-63200634 | None:intergenic |
ACATTATCCATGTAATAGTG+TGG | 0.627160 | 2.4:-63205623 | None:intergenic |
ATGGACAACATCAACAACCA+TGG | 0.630008 | 2.4:+63200545 | MS.gene047479:CDS |
ACGGCACTGGAAGCCTTCAG+AGG | 0.633606 | 2.4:+63205568 | MS.gene047479:CDS |
GTGGTGCTTACAGATGGGTA+AGG | 0.637343 | 2.4:-63204685 | None:intergenic |
ATGGTGTTAGATAGATCCAT+GGG | 0.639715 | 2.4:-63205662 | None:intergenic |
AGATCCTCAAGCAGAAGACA+GGG | 0.640900 | 2.4:+63204519 | MS.gene047479:CDS |
ATGAAATAGTAACCTAAACC+AGG | 0.642596 | 2.4:-63200524 | None:intergenic |
CCGAGGTAATAACTAGAGCA+TGG | 0.644204 | 2.4:-63205681 | None:intergenic |
AGAATGGGTGGAGATGCAGT+TGG | 0.655702 | 2.4:+63200998 | MS.gene047479:CDS |
GCAACTGCAGTGAGAATGGG+TGG | 0.659150 | 2.4:+63200986 | MS.gene047479:CDS |
GGTGGAGCAGACATTACAAG+TGG | 0.680780 | 2.4:+63204662 | MS.gene047479:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATATATATATATATAAAA+AGG | - | chr2.4:63203994-63204013 | None:intergenic | 0.0% |
!! | AAATTTAATTAGAAATATTG+TGG | - | chr2.4:63204745-63204764 | None:intergenic | 10.0% |
!! | ATTCTAATAATTAATAACAA+TGG | + | chr2.4:63203112-63203131 | MS.gene047479:intron | 10.0% |
!! | TTTGAATATATGAAAATAAA+AGG | - | chr2.4:63204365-63204384 | None:intergenic | 10.0% |
!! | AAATAATAACCAATGAATTA+GGG | + | chr2.4:63201908-63201927 | MS.gene047479:intron | 15.0% |
!! | TAAATAATAACCAATGAATT+AGG | + | chr2.4:63201907-63201926 | MS.gene047479:intron | 15.0% |
!! | TAAATATAGAAATCTAACAT+TGG | - | chr2.4:63204049-63204068 | None:intergenic | 15.0% |
!! | TACTATAATTTATGAATAAC+AGG | + | chr2.4:63205466-63205485 | MS.gene047479:intron | 15.0% |
!! | TTGTCAATATTAGTAATAAA+TGG | - | chr2.4:63200809-63200828 | None:intergenic | 15.0% |
!!! | AAAGATTCAAATTTTTAAAG+TGG | - | chr2.4:63204707-63204726 | None:intergenic | 15.0% |
!!! | AAGTTTTTTTATGTTTTGAA+GGG | - | chr2.4:63202854-63202873 | None:intergenic | 15.0% |
!!! | TTCATAAATTTTTTACTTCA+TGG | + | chr2.4:63200906-63200925 | MS.gene047479:intron | 15.0% |
!! | AAACATGTATAATTGATAAG+TGG | - | chr2.4:63202883-63202902 | None:intergenic | 20.0% |
!! | AAACATTGAATTGAAAACTT+TGG | - | chr2.4:63202733-63202752 | None:intergenic | 20.0% |
!! | AATAAAATATTCCATCCATA+GGG | - | chr2.4:63202266-63202285 | None:intergenic | 20.0% |
!! | AATACATGTTTATATGGTTA+GGG | - | chr2.4:63205350-63205369 | None:intergenic | 20.0% |
!! | AGGTTAAAATATTAACAATG+TGG | - | chr2.4:63203974-63203993 | None:intergenic | 20.0% |
!! | ATGATATACTACAAAAATAG+AGG | - | chr2.4:63202778-63202797 | None:intergenic | 20.0% |
!! | ATTACTTCAAACATAATCAA+AGG | - | chr2.4:63203138-63203157 | None:intergenic | 20.0% |
!! | ATTTATTAAAATCCGTAACT+AGG | - | chr2.4:63204795-63204814 | None:intergenic | 20.0% |
!! | CAAAATACTTAACTTATGAA+GGG | - | chr2.4:63203265-63203284 | None:intergenic | 20.0% |
!! | CTAAGATAATCTTTCTATAT+AGG | - | chr2.4:63202944-63202963 | None:intergenic | 20.0% |
!! | CTATATAGAAAGATTATCTT+AGG | + | chr2.4:63202942-63202961 | MS.gene047479:intron | 20.0% |
!! | GCAAATAATATAACATTAGA+AGG | - | chr2.4:63204392-63204411 | None:intergenic | 20.0% |
!! | GTAGTACATATATATTTCAT+TGG | + | chr2.4:63201591-63201610 | MS.gene047479:intron | 20.0% |
!! | TAATAAAATATTCCATCCAT+AGG | - | chr2.4:63202267-63202286 | None:intergenic | 20.0% |
!! | TACATAAAAGTAAACCAATA+AGG | - | chr2.4:63203665-63203684 | None:intergenic | 20.0% |
!! | TATTATCATAGGGATAAAAA+TGG | - | chr2.4:63203174-63203193 | None:intergenic | 20.0% |
!! | TATTATTGTTAGTGGAATTA+GGG | - | chr2.4:63200436-63200455 | None:intergenic | 20.0% |
!! | TCCTATAATCAAATATATGT+GGG | - | chr2.4:63203778-63203797 | None:intergenic | 20.0% |
!! | TCTATATCAAATGTGTAAAT+TGG | + | chr2.4:63205108-63205127 | MS.gene047479:intron | 20.0% |
!! | TGATATACTACAAAAATAGA+GGG | - | chr2.4:63202777-63202796 | None:intergenic | 20.0% |
!! | TTATTATTGTTAGTGGAATT+AGG | - | chr2.4:63200437-63200456 | None:intergenic | 20.0% |
!! | TTGTACAATACATGTTTATA+TGG | - | chr2.4:63205356-63205375 | None:intergenic | 20.0% |
!! | TTTATCATCTATGCTTAAAA+GGG | - | chr2.4:63200861-63200880 | None:intergenic | 20.0% |
!! | TTTATGAAGAAAAGGAAAAA+AGG | + | chr2.4:63204601-63204620 | MS.gene047479:CDS | 20.0% |
!! | TTTGCAAATTTGAAAAATCA+TGG | - | chr2.4:63204960-63204979 | None:intergenic | 20.0% |
!! | TTTGTAATGAATCCAAAATT+TGG | + | chr2.4:63201841-63201860 | MS.gene047479:intron | 20.0% |
!!! | AAAATCTGAATAGTATTTTC+TGG | - | chr2.4:63201227-63201246 | None:intergenic | 20.0% |
!!! | AATTAAAAATAGGAGTACAA+GGG | + | chr2.4:63203704-63203723 | MS.gene047479:intron | 20.0% |
!!! | ATTTGAAGACTGATTTTTTA+AGG | + | chr2.4:63205036-63205055 | MS.gene047479:intron | 20.0% |
!!! | CAAGTTTTTTTATGTTTTGA+AGG | - | chr2.4:63202855-63202874 | None:intergenic | 20.0% |
!!! | CTTGATAGTATTGTTTTTAT+GGG | + | chr2.4:63201687-63201706 | MS.gene047479:intron | 20.0% |
!!! | GATCGATTTTCTTTATAAAA+TGG | - | chr2.4:63203011-63203030 | None:intergenic | 20.0% |
!!! | GTACAATTTACTTTTTTTGA+AGG | + | chr2.4:63205370-63205389 | MS.gene047479:intron | 20.0% |
!!! | TAATACAAGGTTTTTTATGA+AGG | - | chr2.4:63199788-63199807 | None:intergenic | 20.0% |
!!! | TACTTCATGGAAATTATTTT+AGG | + | chr2.4:63200919-63200938 | MS.gene047479:intron | 20.0% |
!!! | TGACTATAAATTGTTTTTAC+CGG | + | chr2.4:63204197-63204216 | MS.gene047479:intron | 20.0% |
!!! | TGCTTGTTTTTAACTAAAAA+TGG | + | chr2.4:63202437-63202456 | MS.gene047479:intron | 20.0% |
!!! | TTACTACTATATACTTCTTT+TGG | - | chr2.4:63202694-63202713 | None:intergenic | 20.0% |
!!! | TTTGATTTCTTTCATTTCAT+AGG | + | chr2.4:63204763-63204782 | MS.gene047479:intron | 20.0% |
!!! | TTTTATGGTAAAAAAGTAAC+AGG | - | chr2.4:63200049-63200068 | None:intergenic | 20.0% |
! | AAATGCATAGCTTAACTAAA+TGG | - | chr2.4:63203055-63203074 | None:intergenic | 25.0% |
! | AAATGTCATAACATAGAACT+TGG | + | chr2.4:63204267-63204286 | MS.gene047479:intron | 25.0% |
! | AAGCTAAGCTACTAAATTAT+TGG | - | chr2.4:63203558-63203577 | None:intergenic | 25.0% |
! | AAGGGTGAATGTTTAATTAA+AGG | - | chr2.4:63203513-63203532 | None:intergenic | 25.0% |
! | AATAATTTAGTAGCTTAGCT+TGG | + | chr2.4:63203557-63203576 | MS.gene047479:intron | 25.0% |
! | AGGCAAAAAGGTTAATAAAA+AGG | + | chr2.4:63200175-63200194 | MS.gene047479:intron | 25.0% |
! | AGTGGAAATCTATTATCATA+GGG | - | chr2.4:63203184-63203203 | None:intergenic | 25.0% |
! | ATATTTGATTATAGGACCTA+AGG | + | chr2.4:63203782-63203801 | MS.gene047479:intron | 25.0% |
! | ATTACTTACACATGAATAGA+AGG | - | chr2.4:63204112-63204131 | None:intergenic | 25.0% |
! | ATTAGTATTGTTGTGGTTAT+TGG | - | chr2.4:63200381-63200400 | None:intergenic | 25.0% |
! | CAAATGTGTAAATTGGATTT+GGG | + | chr2.4:63205115-63205134 | MS.gene047479:intron | 25.0% |
! | CAATACATGTTTATATGGTT+AGG | - | chr2.4:63205351-63205370 | None:intergenic | 25.0% |
! | CATATATATTTCATTGGTGT+TGG | + | chr2.4:63201597-63201616 | MS.gene047479:intron | 25.0% |
! | CCAAAATACTTAACTTATGA+AGG | - | chr2.4:63203266-63203285 | None:intergenic | 25.0% |
! | CCTATAATCAAATATATGTG+GGG | - | chr2.4:63203777-63203796 | None:intergenic | 25.0% |
! | CTATAATCAAATATATGTGG+GGG | - | chr2.4:63203776-63203795 | None:intergenic | 25.0% |
! | CTTTATCATCTATGCTTAAA+AGG | - | chr2.4:63200862-63200881 | None:intergenic | 25.0% |
! | GAAGAGTTCCAATTAAAAAT+AGG | + | chr2.4:63203694-63203713 | MS.gene047479:intron | 25.0% |
! | GATATACTACAAAAATAGAG+GGG | - | chr2.4:63202776-63202795 | None:intergenic | 25.0% |
! | GTCCTATAATCAAATATATG+TGG | - | chr2.4:63203779-63203798 | None:intergenic | 25.0% |
! | TAAACTCACCATTATTCTTA+AGG | - | chr2.4:63202180-63202199 | None:intergenic | 25.0% |
! | TAACTAAATCCAAGTTTGTA+AGG | + | chr2.4:63202974-63202993 | MS.gene047479:intron | 25.0% |
! | TAAGACAGTACATTACTAAA+AGG | - | chr2.4:63202831-63202850 | None:intergenic | 25.0% |
! | TATAATCAAATATATGTGGG+GGG | - | chr2.4:63203775-63203794 | None:intergenic | 25.0% |
! | TCAAATACTAAATGCATGTT+CGG | - | chr2.4:63205022-63205041 | None:intergenic | 25.0% |
! | TCAAATGTGTAAATTGGATT+TGG | + | chr2.4:63205114-63205133 | MS.gene047479:intron | 25.0% |
! | TCACAAGTTTCTTTCTAAAT+TGG | + | chr2.4:63201977-63201996 | MS.gene047479:intron | 25.0% |
! | TCTTCTTATTCTTATGTGAT+GGG | + | chr2.4:63200260-63200279 | MS.gene047479:CDS | 25.0% |
! | TCTTCTTCTTCAGATAATAT+TGG | + | chr2.4:63201175-63201194 | MS.gene047479:CDS | 25.0% |
! | TTCTTCTTATTCTTATGTGA+TGG | + | chr2.4:63200259-63200278 | MS.gene047479:CDS | 25.0% |
! | TTGAAGGAACTTAACTATAT+AGG | + | chr2.4:63201624-63201643 | MS.gene047479:intron | 25.0% |
! | TTGTGGTTATTGGAATTTAT+TGG | - | chr2.4:63200371-63200390 | None:intergenic | 25.0% |
!! | AAAAATCTTGCAAAGTTGAT+TGG | + | chr2.4:63202104-63202123 | MS.gene047479:intron | 25.0% |
!! | AAACTGTAAGATTTTTGAAC+TGG | - | chr2.4:63201156-63201175 | None:intergenic | 25.0% |
!! | AAGCTACTAAATTATTGGTT+AGG | - | chr2.4:63203553-63203572 | None:intergenic | 25.0% |
!! | ACTATGTTTGTTAACCTTAT+TGG | + | chr2.4:63203648-63203667 | MS.gene047479:intron | 25.0% |
!! | AGAAAGATTATCTTAGGTTT+TGG | + | chr2.4:63202948-63202967 | MS.gene047479:intron | 25.0% |
!! | AGTTGTTTGCATTAATTTGA+AGG | + | chr2.4:63205069-63205088 | MS.gene047479:intron | 25.0% |
!! | ATCAAAATGGTTAGGATTTT+TGG | - | chr2.4:63203945-63203964 | None:intergenic | 25.0% |
!! | ATTAAAAATAGGAGTACAAG+GGG | + | chr2.4:63203705-63203724 | MS.gene047479:intron | 25.0% |
!! | CAATTAAAAATAGGAGTACA+AGG | + | chr2.4:63203703-63203722 | MS.gene047479:intron | 25.0% |
!! | CCTTCATAAGTTAAGTATTT+TGG | + | chr2.4:63203263-63203282 | MS.gene047479:intron | 25.0% |
!! | GCATTTTTGTCTGAAAATAA+AGG | + | chr2.4:63201552-63201571 | MS.gene047479:intron | 25.0% |
!! | GTGATTGTTATTATTGTTAG+TGG | - | chr2.4:63200444-63200463 | None:intergenic | 25.0% |
!! | GTGGATTTTAGATTATGATA+TGG | + | chr2.4:63202066-63202085 | MS.gene047479:intron | 25.0% |
!! | TAATTTTGCATTCAGTTACT+TGG | - | chr2.4:63203870-63203889 | None:intergenic | 25.0% |
!! | TATTTGGAACTCACTTATTT+AGG | - | chr2.4:63201504-63201523 | None:intergenic | 25.0% |
!! | TCAAAATCTGCATTGATATT+TGG | + | chr2.4:63205242-63205261 | MS.gene047479:intron | 25.0% |
!! | TTAAAATTTCCCTTTTGATG+AGG | + | chr2.4:63201748-63201767 | MS.gene047479:intron | 25.0% |
!! | TTAAGCTATGCATTTTTCTT+CGG | + | chr2.4:63203060-63203079 | MS.gene047479:intron | 25.0% |
!! | TTTAACTTTGTCTTCTTTGA+AGG | + | chr2.4:63203322-63203341 | MS.gene047479:intron | 25.0% |
!! | TTTTCTATGATGTTCATTGT+TGG | + | chr2.4:63202482-63202501 | MS.gene047479:intron | 25.0% |
!!! | ATAATTGTACTTTGAAACTG+TGG | + | chr2.4:63200767-63200786 | MS.gene047479:intron | 25.0% |
!!! | ATTTTAATGTTCTGTTTACG+AGG | + | chr2.4:63204068-63204087 | MS.gene047479:intron | 25.0% |
!!! | CATAGCTTAATCTCTTTTTT+AGG | - | chr2.4:63202143-63202162 | None:intergenic | 25.0% |
!!! | CTTGTACTCCTATTTTTAAT+TGG | - | chr2.4:63203705-63203724 | None:intergenic | 25.0% |
!!! | CTTTTTTTGTTTGACAAGTT+TGG | + | chr2.4:63200725-63200744 | MS.gene047479:intron | 25.0% |
!!! | GCTTGATAGTATTGTTTTTA+TGG | + | chr2.4:63201686-63201705 | MS.gene047479:intron | 25.0% |
!!! | TAAATAGTGATAGTGTTTTG+TGG | - | chr2.4:63200008-63200027 | None:intergenic | 25.0% |
!!! | TAATTGTACTTTGAAACTGT+GGG | + | chr2.4:63200768-63200787 | MS.gene047479:intron | 25.0% |
!!! | TACTTTTTTACCATAAAACC+CGG | + | chr2.4:63200051-63200070 | MS.gene047479:intron | 25.0% |
!!! | TCATGGAAATTATTTTAGGT+TGG | + | chr2.4:63200923-63200942 | MS.gene047479:intron | 25.0% |
!!! | TTTGTTTTTGTTTCACACAA+GGG | - | chr2.4:63200085-63200104 | None:intergenic | 25.0% |
!!! | TTTTGTTTTTGTTTCACACA+AGG | - | chr2.4:63200086-63200105 | None:intergenic | 25.0% |
AAAGAAAAATCTGACCTAGA+AGG | + | chr2.4:63200155-63200174 | MS.gene047479:intron | 30.0% | |
AACCTTATCACATAATGCAT+TGG | + | chr2.4:63202608-63202627 | MS.gene047479:intron | 30.0% | |
AATGTGGAGTGAAATCAAAA+TGG | - | chr2.4:63203958-63203977 | None:intergenic | 30.0% | |
ACATTATCCATGTAATAGTG+TGG | - | chr2.4:63205626-63205645 | None:intergenic | 30.0% | |
ACTAATGCAAACAACATAAG+CGG | + | chr2.4:63200395-63200414 | MS.gene047479:CDS | 30.0% | |
AGAAAATACAGTGGATACTT+AGG | + | chr2.4:63204562-63204581 | MS.gene047479:CDS | 30.0% | |
AGACAAAAATGCATGAGTTA+AGG | - | chr2.4:63201544-63201563 | None:intergenic | 30.0% | |
AGCAAGAGTTTATGAAGAAA+AGG | + | chr2.4:63204593-63204612 | MS.gene047479:CDS | 30.0% | |
AGCTAGTTGAAATAGTATCA+TGG | + | chr2.4:63203609-63203628 | MS.gene047479:intron | 30.0% | |
AGTGAGTATTAATTCAATGG+AGG | + | chr2.4:63200220-63200239 | MS.gene047479:intron | 30.0% | |
ATCAGAAGCAAATAAACAAC+TGG | + | chr2.4:63205528-63205547 | MS.gene047479:CDS | 30.0% | |
ATCCAATGCATTATGTGATA+AGG | - | chr2.4:63202613-63202632 | None:intergenic | 30.0% | |
ATGAAATAGTAACCTAAACC+AGG | - | chr2.4:63200527-63200546 | None:intergenic | 30.0% | |
CAGTGGAAATCTATTATCAT+AGG | - | chr2.4:63203185-63203204 | None:intergenic | 30.0% | |
CATCATAGAAAAATGCATGT+AGG | - | chr2.4:63202474-63202493 | None:intergenic | 30.0% | |
CATTAAATGCTGAAAATGTG+TGG | + | chr2.4:63199858-63199877 | MS.gene047479:intron | 30.0% | |
CCCCACATATATTTGATTAT+AGG | + | chr2.4:63203774-63203793 | MS.gene047479:intron | 30.0% | |
CTATGATAATAGATTTCCAC+TGG | + | chr2.4:63203183-63203202 | MS.gene047479:intron | 30.0% | |
GAAAACTTTGGATCAATATG+TGG | - | chr2.4:63202721-63202740 | None:intergenic | 30.0% | |
GACAAAAATGCATGAGTTAA+GGG | - | chr2.4:63201543-63201562 | None:intergenic | 30.0% | |
GCAAATTTGAAAAATCATGG+TGG | - | chr2.4:63204957-63204976 | None:intergenic | 30.0% | |
GGTTTATCAATCAAAGGAAA+CGG | + | chr2.4:63205549-63205568 | MS.gene047479:CDS | 30.0% | |
GTAATGAATCCAAAATTTGG+AGG | + | chr2.4:63201844-63201863 | MS.gene047479:intron | 30.0% | |
GTGAGTATTAATTCAATGGA+GGG | + | chr2.4:63200221-63200240 | MS.gene047479:intron | 30.0% | |
GTGAGTGAGTATTAATTCAA+TGG | + | chr2.4:63200217-63200236 | MS.gene047479:intron | 30.0% | |
TAATTAAACATTCACCCTTG+TGG | + | chr2.4:63203514-63203533 | MS.gene047479:intron | 30.0% | |
TAGTAGGTCCTTAAGAATAA+TGG | + | chr2.4:63202169-63202188 | MS.gene047479:intron | 30.0% | |
TCAAATGTTAACCTTCAATG+TGG | + | chr2.4:63203447-63203466 | MS.gene047479:intron | 30.0% | |
TCAACAACAATAATTGCTAC+CGG | - | chr2.4:63204219-63204238 | None:intergenic | 30.0% | |
TGAAGGTTAACATTTGAACT+AGG | - | chr2.4:63203444-63203463 | None:intergenic | 30.0% | |
TGTCTGAAAATAAAGGTAGA+TGG | + | chr2.4:63201559-63201578 | MS.gene047479:intron | 30.0% | |
TGTTTGCATTAGTATTGTTG+TGG | - | chr2.4:63200388-63200407 | None:intergenic | 30.0% | |
TTAAGCTATGATGTGTTAGT+AGG | + | chr2.4:63202153-63202172 | MS.gene047479:intron | 30.0% | |
TTATTGCAAAAGCTACACAT+TGG | - | chr2.4:63204917-63204936 | None:intergenic | 30.0% | |
TTCCAAATACTTGAAACCAA+AGG | + | chr2.4:63201515-63201534 | MS.gene047479:intron | 30.0% | |
TTGGAGCTACAAAAAAATCA+CGG | - | chr2.4:63204898-63204917 | None:intergenic | 30.0% | |
! | AAAAAGCATAGCTTCCTTTA+AGG | - | chr2.4:63201116-63201135 | None:intergenic | 30.0% |
! | AAAAGCATAGCTTCCTTTAA+GGG | - | chr2.4:63201115-63201134 | None:intergenic | 30.0% |
! | ACAACTGGTTTATCAATCAA+AGG | + | chr2.4:63205543-63205562 | MS.gene047479:CDS | 30.0% |
! | ATCCAAGTTTGTAAGGTTTT+CGG | + | chr2.4:63202981-63203000 | MS.gene047479:intron | 30.0% |
! | GATTAACACTCATTTTCCAA+AGG | + | chr2.4:63199888-63199907 | MS.gene047479:intron | 30.0% |
! | GGAATCAACTTTTTGCAAAT+CGG | + | chr2.4:63204288-63204307 | MS.gene047479:intron | 30.0% |
! | TATTAACCTTTTTGCCTTCT+AGG | - | chr2.4:63200172-63200191 | None:intergenic | 30.0% |
! | TGGTTTAGGTTACTATTTCA+TGG | + | chr2.4:63200526-63200545 | MS.gene047479:CDS | 30.0% |
! | TGTTTATATGGTTAGGGTTT+TGG | - | chr2.4:63205344-63205363 | None:intergenic | 30.0% |
! | TTTGTCTTCTTTGAAGGAAA+AGG | + | chr2.4:63203328-63203347 | MS.gene047479:intron | 30.0% |
! | TTTTCTCATTTGTCTCATCA+AGG | + | chr2.4:63202222-63202241 | MS.gene047479:intron | 30.0% |
!! | AGTGATTTGCTAAAATTGTG+TGG | + | chr2.4:63204869-63204888 | MS.gene047479:intron | 30.0% |
!! | ATGTATATTTTTGTGTCTGC+AGG | + | chr2.4:63202336-63202355 | MS.gene047479:intron | 30.0% |
!! | GACAAATTTTGATACCACAA+GGG | - | chr2.4:63203531-63203550 | None:intergenic | 30.0% |
!! | TAAAAAGGAAGTGTTACTTG+TGG | + | chr2.4:63200190-63200209 | MS.gene047479:intron | 30.0% |
!!! | AAGCTATGCTTTTTCTTCAA+AGG | + | chr2.4:63201122-63201141 | MS.gene047479:CDS | 30.0% |
!!! | ACTTTTTTACCATAAAACCC+GGG | + | chr2.4:63200052-63200071 | MS.gene047479:intron | 30.0% |
!!! | ATTTTGAAGCATGATAGAAG+AGG | - | chr2.4:63200489-63200508 | None:intergenic | 30.0% |
AAAAGGAAAGCTTCCAAAAG+AGG | + | chr2.4:63204618-63204637 | MS.gene047479:CDS | 35.0% | |
AACATTTGAACTAGGTGCAT+AGG | - | chr2.4:63203436-63203455 | None:intergenic | 35.0% | |
AAGGTTGAGTTACAGAAGAA+GGG | - | chr2.4:63199719-63199738 | None:intergenic | 35.0% | |
AAGTCATCCACACTATTACA+TGG | + | chr2.4:63205616-63205635 | MS.gene047479:CDS | 35.0% | |
AATAACCATCAAAACACTCC+TGG | + | chr2.4:63200506-63200525 | MS.gene047479:CDS | 35.0% | |
AATGTTCTGTTTACGAGGAT+TGG | + | chr2.4:63204073-63204092 | MS.gene047479:intron | 35.0% | |
ACTCATCCATATACAACCAA+GGG | + | chr2.4:63203729-63203748 | MS.gene047479:intron | 35.0% | |
AGAACTTTCCAAACCCTTAA+AGG | + | chr2.4:63201099-63201118 | MS.gene047479:CDS | 35.0% | |
ATATGATCAGCTTGTAGTGA+AGG | + | chr2.4:63204439-63204458 | MS.gene047479:intron | 35.0% | |
ATCCAAAATTTGGAGGACTT+CGG | + | chr2.4:63201851-63201870 | MS.gene047479:intron | 35.0% | |
ATGTAATAGTGTGGATGACT+TGG | - | chr2.4:63205617-63205636 | None:intergenic | 35.0% | |
ATTGTTAGTGGAATTAGGGA+TGG | - | chr2.4:63200432-63200451 | None:intergenic | 35.0% | |
CAGAAGAAACCCTAATTCAT+TGG | - | chr2.4:63201920-63201939 | None:intergenic | 35.0% | |
CTAAACACCACTCAAAGAAA+AGG | + | chr2.4:63203821-63203840 | MS.gene047479:intron | 35.0% | |
CTACACATCCATTATTTCCA+AGG | - | chr2.4:63203388-63203407 | None:intergenic | 35.0% | |
GCATCTAAACCCTGAAATAA+TGG | - | chr2.4:63203359-63203378 | None:intergenic | 35.0% | |
GCTGAAACTAGCATATATGT+TGG | - | chr2.4:63203592-63203611 | None:intergenic | 35.0% | |
GGAGTGAAATCAAAATGGTT+AGG | - | chr2.4:63203953-63203972 | None:intergenic | 35.0% | |
GTCATATGAATTGCATCCTT+AGG | - | chr2.4:63203801-63203820 | None:intergenic | 35.0% | |
TACATGAAGAAGTAGTGAAG+AGG | - | chr2.4:63199957-63199976 | None:intergenic | 35.0% | |
TACTCATCCATATACAACCA+AGG | + | chr2.4:63203728-63203747 | MS.gene047479:intron | 35.0% | |
TACTTCTTCATGTAACTGAC+TGG | + | chr2.4:63199963-63199982 | MS.gene047479:CDS | 35.0% | |
TATTTCAGGGTTTAGATGCA+TGG | + | chr2.4:63203360-63203379 | MS.gene047479:intron | 35.0% | |
TCAATGATCCACTAAAAGCT+TGG | - | chr2.4:63202646-63202665 | None:intergenic | 35.0% | |
TGATGAGATGAAGTGACTAA+AGG | - | chr2.4:63200335-63200354 | None:intergenic | 35.0% | |
TGGTGCTTATCAAAAAACTG+TGG | + | chr2.4:63202502-63202521 | MS.gene047479:intron | 35.0% | |
TGTAGTATATCATCGTATGC+TGG | + | chr2.4:63202785-63202804 | MS.gene047479:intron | 35.0% | |
TTAAAGTGGTGCTTACAGAT+GGG | - | chr2.4:63204693-63204712 | None:intergenic | 35.0% | |
TTCTGTGAAATCCAAGATCA+TGG | + | chr2.4:63200595-63200614 | MS.gene047479:CDS | 35.0% | |
TTGATCACATTATTGACCGT+TGG | - | chr2.4:63205284-63205303 | None:intergenic | 35.0% | |
TTGGATCAAAATCAGACGAT+TGG | + | chr2.4:63205185-63205204 | MS.gene047479:intron | 35.0% | |
TTGTTAGTGGAATTAGGGAT+GGG | - | chr2.4:63200431-63200450 | None:intergenic | 35.0% | |
TTTCTGTGACCTCATCAAAA+GGG | - | chr2.4:63201760-63201779 | None:intergenic | 35.0% | |
TTTGCATTCAGTTACTTGGA+AGG | - | chr2.4:63203866-63203885 | None:intergenic | 35.0% | |
! | AAACATGACCAAGCTTTTAG+TGG | + | chr2.4:63202635-63202654 | MS.gene047479:intron | 35.0% |
! | AAAGAGGTAAAGTACTTTCC+TGG | + | chr2.4:63202030-63202049 | MS.gene047479:intron | 35.0% |
! | AAGAGGTAAAGTACTTTCCT+GGG | + | chr2.4:63202031-63202050 | MS.gene047479:intron | 35.0% |
! | AAGGAAGGTAGAGTTTTCAT+TGG | + | chr2.4:63199653-63199672 | MS.gene047479:CDS | 35.0% |
! | AGGAAGGTAGAGTTTTCATT+GGG | + | chr2.4:63199654-63199673 | MS.gene047479:CDS | 35.0% |
! | ATGGTGTTAGATAGATCCAT+GGG | - | chr2.4:63205665-63205684 | None:intergenic | 35.0% |
! | CACCTTTGGTTTCAAGTATT+TGG | - | chr2.4:63201520-63201539 | None:intergenic | 35.0% |
! | CTTTTCTTTGAGTGGTGTTT+AGG | - | chr2.4:63203823-63203842 | None:intergenic | 35.0% |
! | TATGCATTTTTCTTCGGCTT+TGG | + | chr2.4:63203066-63203085 | MS.gene047479:intron | 35.0% |
! | TCCAAGTTTGTAAGGTTTTC+GGG | + | chr2.4:63202982-63203001 | MS.gene047479:intron | 35.0% |
! | TCTAGCTAGTGGATAATACA+AGG | - | chr2.4:63199801-63199820 | None:intergenic | 35.0% |
! | TCTAGCTTCCAACTATGTAT+GGG | + | chr2.4:63202668-63202687 | MS.gene047479:intron | 35.0% |
! | TTTAAAGTGGTGCTTACAGA+TGG | - | chr2.4:63204694-63204713 | None:intergenic | 35.0% |
!! | AAAGGAGTGTCCATTATTTC+AGG | + | chr2.4:63203346-63203365 | MS.gene047479:intron | 35.0% |
!! | AAGGAGTGTCCATTATTTCA+GGG | + | chr2.4:63203347-63203366 | MS.gene047479:intron | 35.0% |
!! | ACTAAAGGCATCATCATCAT+TGG | - | chr2.4:63200320-63200339 | None:intergenic | 35.0% |
!! | AGAGGTGTTGTTATTACAGT+TGG | - | chr2.4:63200471-63200490 | None:intergenic | 35.0% |
!! | AGGAAAGTACTTTACCTCTT+TGG | - | chr2.4:63202031-63202050 | None:intergenic | 35.0% |
!! | ATAGTGATAGTGTTTTGTGG+TGG | - | chr2.4:63200005-63200024 | None:intergenic | 35.0% |
!! | CAGCTTTTGAGAAAATACAG+TGG | + | chr2.4:63204553-63204572 | MS.gene047479:CDS | 35.0% |
!! | GATTTTGATCCAATGACCTT+TGG | - | chr2.4:63205178-63205197 | None:intergenic | 35.0% |
!! | GGACAAATTTTGATACCACA+AGG | - | chr2.4:63203532-63203551 | None:intergenic | 35.0% |
!! | GTTACTTGGAAGGTATTTCA+TGG | - | chr2.4:63203856-63203875 | None:intergenic | 35.0% |
!! | TCATTGATTCACCACATTGA+AGG | - | chr2.4:63203461-63203480 | None:intergenic | 35.0% |
!! | TTCTAGCTTCCAACTATGTA+TGG | + | chr2.4:63202667-63202686 | MS.gene047479:intron | 35.0% |
!! | TTGAAAAATCATGGTGGACT+TGG | - | chr2.4:63204951-63204970 | None:intergenic | 35.0% |
!!! | GAAGTAGTGAAGAGGTTTTT+TGG | - | chr2.4:63199949-63199968 | None:intergenic | 35.0% |
!!! | GGGAAGGTAAAACCTTTTTT+TGG | + | chr2.4:63199674-63199693 | MS.gene047479:intron | 35.0% |
!!! | TGGTTTTGATTTCTGCATCT+AGG | + | chr2.4:63203203-63203222 | MS.gene047479:intron | 35.0% |
!!! | TTTTTGGCTTCTTCTACTAC+TGG | - | chr2.4:63199933-63199952 | None:intergenic | 35.0% |
AAGAAGAAGAAGAGCTTCCA+TGG | - | chr2.4:63200565-63200584 | None:intergenic | 40.0% | |
AAGGGCAAGCTAATTACAAG+GGG | + | chr2.4:63203747-63203766 | MS.gene047479:intron | 40.0% | |
ACCCGAAAACCTTACAAACT+TGG | - | chr2.4:63202986-63203005 | None:intergenic | 40.0% | |
ACCTTTCGATCTTGATCCAA+CGG | + | chr2.4:63205265-63205284 | MS.gene047479:intron | 40.0% | |
AGCAGAAGACAGGGAATTAA+AGG | + | chr2.4:63204528-63204547 | MS.gene047479:CDS | 40.0% | |
AGCCTACATCAACTGTCAAA+AGG | + | chr2.4:63200646-63200665 | MS.gene047479:CDS | 40.0% | |
ATAACAGGAATCACAGAAGC+TGG | + | chr2.4:63205481-63205500 | MS.gene047479:intron | 40.0% | |
ATAGTAGAGTAGCTCCAAAG+AGG | + | chr2.4:63202014-63202033 | MS.gene047479:intron | 40.0% | |
ATCTGACCTAGAAGGCAAAA+AGG | + | chr2.4:63200163-63200182 | MS.gene047479:intron | 40.0% | |
ATGGACAACATCAACAACCA+TGG | + | chr2.4:63200545-63200564 | MS.gene047479:CDS | 40.0% | |
CAAGGCAACAATTGCTTGAA+TGG | + | chr2.4:63204641-63204660 | MS.gene047479:CDS | 40.0% | |
CAAGGGCAAGCTAATTACAA+GGG | + | chr2.4:63203746-63203765 | MS.gene047479:intron | 40.0% | |
CACATGAATAGAAGGCAAGT+TGG | - | chr2.4:63204104-63204123 | None:intergenic | 40.0% | |
CAGAAACTCTCAGATTTCAC+TGG | + | chr2.4:63201774-63201793 | MS.gene047479:intron | 40.0% | |
CATAGGCAATCACCTAGTTA+CGG | + | chr2.4:63204780-63204799 | MS.gene047479:intron | 40.0% | |
CATAGGGAGTAGTGTTTACA+CGG | - | chr2.4:63202250-63202269 | None:intergenic | 40.0% | |
CATCAAAACACTCCTGGTTT+AGG | + | chr2.4:63200512-63200531 | MS.gene047479:CDS | 40.0% | |
GAAGGTTGAGTTACAGAAGA+AGG | - | chr2.4:63199720-63199739 | None:intergenic | 40.0% | |
GATGCAGAAATCAAAACCAG+TGG | - | chr2.4:63203202-63203221 | None:intergenic | 40.0% | |
GCAGAAGACAGGGAATTAAA+GGG | + | chr2.4:63204529-63204548 | MS.gene047479:CDS | 40.0% | |
GTATGAAGAGAGAGAGATGA+AGG | - | chr2.4:63199738-63199757 | None:intergenic | 40.0% | |
GTTTCTGTGACCTCATCAAA+AGG | - | chr2.4:63201761-63201780 | None:intergenic | 40.0% | |
TAAACACTACTCCCTATGGA+TGG | + | chr2.4:63202252-63202271 | MS.gene047479:intron | 40.0% | |
TAGCGTGACTTGAAAAACCA+TGG | - | chr2.4:63204997-63205016 | None:intergenic | 40.0% | |
TATCCATGCATGTCTGTGTT+TGG | + | chr2.4:63201293-63201312 | MS.gene047479:intron | 40.0% | |
TCTCAGCAATTCATATCCCA+TGG | + | chr2.4:63205646-63205665 | MS.gene047479:CDS | 40.0% | |
TGACAACTCATGTTTCGACT+TGG | + | chr2.4:63204828-63204847 | MS.gene047479:intron | 40.0% | |
TGCAAATCGGATTGAAGAGT+AGG | + | chr2.4:63204301-63204320 | MS.gene047479:intron | 40.0% | |
TGGTGAAGTATACATTCACG+AGG | + | chr2.4:63203283-63203302 | MS.gene047479:intron | 40.0% | |
TTTCCAAAGGAAATCTGTGC+AGG | + | chr2.4:63199901-63199920 | MS.gene047479:intron | 40.0% | |
! | AATTGTTGCCTTGCCTCTTT+TGG | - | chr2.4:63204634-63204653 | None:intergenic | 40.0% |
! | AGAGGTAAAGTACTTTCCTG+GGG | + | chr2.4:63202032-63202051 | MS.gene047479:intron | 40.0% |
! | AGGTAGAGTTTTCATTGGGA+AGG | + | chr2.4:63199658-63199677 | MS.gene047479:CDS | 40.0% |
! | CATAGCTTCCTTTAAGGGTT+TGG | - | chr2.4:63201110-63201129 | None:intergenic | 40.0% |
! | CATGGTGTTAGATAGATCCA+TGG | - | chr2.4:63205666-63205685 | None:intergenic | 40.0% |
! | GAAGATTGGTGGGTGAATTT+AGG | + | chr2.4:63201879-63201898 | MS.gene047479:intron | 40.0% |
! | GCAATAGCCTTTTCTTTGAG+TGG | - | chr2.4:63203831-63203850 | None:intergenic | 40.0% |
! | TCTTTTGGCCCATACATAGT+TGG | - | chr2.4:63202679-63202698 | None:intergenic | 40.0% |
! | TTCCGAAGTCCTCCAAATTT+TGG | - | chr2.4:63201856-63201875 | None:intergenic | 40.0% |
! | TTTTTACCATAAAACCCGGG+CGG | + | chr2.4:63200055-63200074 | MS.gene047479:intron | 40.0% |
!! | AAAGGCATCATCATCATTGG+AGG | - | chr2.4:63200317-63200336 | None:intergenic | 40.0% |
!! | ACTTGGAAGGTATTTCATGG+AGG | - | chr2.4:63203853-63203872 | None:intergenic | 40.0% |
!! | CTTTTGGAGAAAACAGTGGT+GGG | + | chr2.4:63200285-63200304 | MS.gene047479:CDS | 40.0% |
!! | GAAGCATTGGTGCCAAAAAA+AGG | - | chr2.4:63199689-63199708 | None:intergenic | 40.0% |
!! | GACCTTTTGACAGTTGATGT+AGG | - | chr2.4:63200651-63200670 | None:intergenic | 40.0% |
!! | TCAATGGAGGGTAGTTCTAA+TGG | + | chr2.4:63200233-63200252 | MS.gene047479:intron | 40.0% |
!! | TGGTTAGGATTTTTGGACCA+TGG | - | chr2.4:63203938-63203957 | None:intergenic | 40.0% |
!!! | CTAAACCAGGAGTGTTTTGA+TGG | - | chr2.4:63200514-63200533 | None:intergenic | 40.0% |
!!! | TCTTATGTGATGGGTGCTTT+TGG | + | chr2.4:63200269-63200288 | MS.gene047479:CDS | 40.0% |
AAAGTCACGTTGAACCACCA+TGG | + | chr2.4:63204977-63204996 | MS.gene047479:intron | 45.0% | |
AAGCCTGCACAGATTTCCTT+TGG | - | chr2.4:63199907-63199926 | None:intergenic | 45.0% | |
AATTCCCTGTCTTCTGCTTG+AGG | - | chr2.4:63204526-63204545 | None:intergenic | 45.0% | |
AATTTGGAGGACTTCGGAAC+AGG | + | chr2.4:63201857-63201876 | MS.gene047479:intron | 45.0% | |
ACAAACTGCATGTCCTCTGA+AGG | - | chr2.4:63205584-63205603 | None:intergenic | 45.0% | |
ACCGTTGGATCAAGATCGAA+AGG | - | chr2.4:63205269-63205288 | None:intergenic | 45.0% | |
ACCTCGCAATTACCACTTCT+GGG | - | chr2.4:63201951-63201970 | None:intergenic | 45.0% | |
ACTAGGGTCTCTTGTGTGTA+TGG | + | chr2.4:63203230-63203249 | MS.gene047479:intron | 45.0% | |
AGATCCTCAAGCAGAAGACA+GGG | + | chr2.4:63204519-63204538 | MS.gene047479:CDS | 45.0% | |
AGCTTGCCCTTGGTTGTATA+TGG | - | chr2.4:63203738-63203757 | None:intergenic | 45.0% | |
AGGTGCATAGGATAAAGAGC+CGG | - | chr2.4:63203424-63203443 | None:intergenic | 45.0% | |
AGTGAAGGTGGAGATAGGAA+TGG | + | chr2.4:63204454-63204473 | MS.gene047479:CDS | 45.0% | |
ATCAGTGGCAGTGCAGAAAA+AGG | + | chr2.4:63199634-63199653 | MS.gene047479:CDS | 45.0% | |
ATGTGCAACTGCAGTGAGAA+TGG | + | chr2.4:63200982-63201001 | MS.gene047479:CDS | 45.0% | |
CCAAGGGCAAGCTAATTACA+AGG | + | chr2.4:63203745-63203764 | MS.gene047479:intron | 45.0% | |
CGGATTGAAGAGTAGGTCTT+GGG | + | chr2.4:63204308-63204327 | MS.gene047479:intron | 45.0% | |
CGTGACTTGAAAAACCATGG+TGG | - | chr2.4:63204994-63205013 | None:intergenic | 45.0% | |
CGTGTAAACACTACTCCCTA+TGG | + | chr2.4:63202248-63202267 | MS.gene047479:intron | 45.0% | |
CTCTTTGTCTCTCTAGCTAG+TGG | - | chr2.4:63199812-63199831 | None:intergenic | 45.0% | |
CTTCCAAACACAGACATGCA+TGG | - | chr2.4:63201299-63201318 | None:intergenic | 45.0% | |
CTTGTAGTGAAGGTGGAGAT+AGG | + | chr2.4:63204449-63204468 | MS.gene047479:CDS | 45.0% | |
GAAAGCTTCCAAAAGAGGCA+AGG | + | chr2.4:63204623-63204642 | MS.gene047479:CDS | 45.0% | |
GCATGGAGCCTTGGAAATAA+TGG | + | chr2.4:63203377-63203396 | MS.gene047479:intron | 45.0% | |
GGCAACAATTGCTTGAATGG+TGG | + | chr2.4:63204644-63204663 | MS.gene047479:CDS | 45.0% | |
GTGTAGATTATGTGCCTTCC+CGG | + | chr2.4:63203402-63203421 | MS.gene047479:intron | 45.0% | |
TACCTCGCAATTACCACTTC+TGG | - | chr2.4:63201952-63201971 | None:intergenic | 45.0% | |
TAGATCCTCAAGCAGAAGAC+AGG | + | chr2.4:63204518-63204537 | MS.gene047479:CDS | 45.0% | |
TAGTGGAATTAGGGATGGGA+AGG | - | chr2.4:63200427-63200446 | None:intergenic | 45.0% | |
TCAATCAAAGGAAACGGCAC+TGG | + | chr2.4:63205555-63205574 | MS.gene047479:CDS | 45.0% | |
TCGGATTGAAGAGTAGGTCT+TGG | + | chr2.4:63204307-63204326 | MS.gene047479:intron | 45.0% | |
TCTGCATCTAGGCTTGACTA+GGG | + | chr2.4:63203214-63203233 | MS.gene047479:intron | 45.0% | |
TGATCAGCTTGTAGTGAAGG+TGG | + | chr2.4:63204442-63204461 | MS.gene047479:intron | 45.0% | |
TGATCCAATGACCTTTGGTG+TGG | - | chr2.4:63205173-63205192 | None:intergenic | 45.0% | |
TGATGTAGGCTTCCAAGAGA+CGG | - | chr2.4:63200637-63200656 | None:intergenic | 45.0% | |
TGTGCAACTGCAGTGAGAAT+GGG | + | chr2.4:63200983-63201002 | MS.gene047479:CDS | 45.0% | |
TTCAGAGGACATGCAGTTTG+TGG | + | chr2.4:63205583-63205602 | MS.gene047479:CDS | 45.0% | |
TTCGGAACAGGAAGATTGGT+GGG | + | chr2.4:63201869-63201888 | MS.gene047479:intron | 45.0% | |
TTCTGCATCTAGGCTTGACT+AGG | + | chr2.4:63203213-63203232 | MS.gene047479:intron | 45.0% | |
! | GAAGGGTTAGTGTGAAGCAT+TGG | - | chr2.4:63199702-63199721 | None:intergenic | 45.0% |
! | GCAGTTGGATCAGGTTGTTT+AGG | + | chr2.4:63201013-63201032 | MS.gene047479:CDS | 45.0% |
! | TCCATGAACTGATCTAGAGC+TGG | - | chr2.4:63201046-63201065 | None:intergenic | 45.0% |
! | TTTTACCATAAAACCCGGGC+GGG | + | chr2.4:63200056-63200075 | MS.gene047479:intron | 45.0% |
!! | CATTGGTGTTGGTGCATTGA+AGG | + | chr2.4:63201608-63201627 | MS.gene047479:intron | 45.0% |
!! | CCTTGTAATTAGCTTGCCCT+TGG | - | chr2.4:63203748-63203767 | None:intergenic | 45.0% |
!! | GCTTTTGGAGAAAACAGTGG+TGG | + | chr2.4:63200284-63200303 | MS.gene047479:CDS | 45.0% |
!! | GGTGCTTTTGGAGAAAACAG+TGG | + | chr2.4:63200281-63200300 | MS.gene047479:CDS | 45.0% |
!! | GTTTCGACTTGGTGCATGTT+TGG | + | chr2.4:63204839-63204858 | MS.gene047479:intron | 45.0% |
!! | TCCAGCTCTAGATCAGTTCA+TGG | + | chr2.4:63201042-63201061 | MS.gene047479:CDS | 45.0% |
AACCTTGCCACCACTTCACT+TGG | - | chr2.4:63200953-63200972 | None:intergenic | 50.0% | |
AGAATGGGTGGAGATGCAGT+TGG | + | chr2.4:63200998-63201017 | MS.gene047479:CDS | 50.0% | |
CACACCACACCAAAGGTCAT+TGG | + | chr2.4:63205166-63205185 | MS.gene047479:intron | 50.0% | |
CATAGGATAAAGAGCCGGGA+AGG | - | chr2.4:63203419-63203438 | None:intergenic | 50.0% | |
CTTCGGAACAGGAAGATTGG+TGG | + | chr2.4:63201868-63201887 | MS.gene047479:intron | 50.0% | |
GGACATGCAGTTTGTGGTGA+TGG | + | chr2.4:63205589-63205608 | MS.gene047479:CDS | 50.0% | |
GGACTTCGGAACAGGAAGAT+TGG | + | chr2.4:63201865-63201884 | MS.gene047479:intron | 50.0% | |
GGTGCATAGGATAAAGAGCC+GGG | - | chr2.4:63203423-63203442 | None:intergenic | 50.0% | |
GGTGGAGCAGACATTACAAG+TGG | + | chr2.4:63204662-63204681 | MS.gene047479:CDS | 50.0% | |
GGTTTAGATGCATGGAGCCT+TGG | + | chr2.4:63203368-63203387 | MS.gene047479:intron | 50.0% | |
GTGAGGATGAGCCATGATCT+TGG | - | chr2.4:63200609-63200628 | None:intergenic | 50.0% | |
GTGGCAGTGCAGAAAAAGGA+AGG | + | chr2.4:63199638-63199657 | MS.gene047479:CDS | 50.0% | |
GTGGTGCTTACAGATGGGTA+AGG | - | chr2.4:63204688-63204707 | None:intergenic | 50.0% | |
TCCCAGAAGTGGTAATTGCG+AGG | + | chr2.4:63201947-63201966 | MS.gene047479:intron | 50.0% | |
TCCTCACTATCACCGTCTCT+TGG | + | chr2.4:63200622-63200641 | MS.gene047479:CDS | 50.0% | |
TCTGCACTTGTTCCCAGAAG+TGG | + | chr2.4:63201936-63201955 | MS.gene047479:intron | 50.0% | |
! | TCCAAGAGACGGTGATAGTG+AGG | - | chr2.4:63200626-63200645 | None:intergenic | 50.0% |
! | TTTGGTGTGGTGTGACTGCA+CGG | - | chr2.4:63205160-63205179 | None:intergenic | 50.0% |
!! | GCATGAGTTAAGGGCACCTT+TGG | - | chr2.4:63201534-63201553 | None:intergenic | 50.0% |
AGAAGCAGTAGAGTGCACGC+GGG | - | chr2.4:63199761-63199780 | None:intergenic | 55.0% | |
CACCAAGTGAAGTGGTGGCA+AGG | + | chr2.4:63200948-63200967 | MS.gene047479:CDS | 55.0% | |
GAGAAGCAGTAGAGTGCACG+CGG | - | chr2.4:63199762-63199781 | None:intergenic | 55.0% | |
GCAACTGCAGTGAGAATGGG+TGG | + | chr2.4:63200986-63201005 | MS.gene047479:CDS | 55.0% | |
GGTGGAGATGCAGTTGGATC+AGG | + | chr2.4:63201004-63201023 | MS.gene047479:CDS | 55.0% | |
GTGCAGTCACACCACACCAA+AGG | + | chr2.4:63205159-63205178 | MS.gene047479:intron | 55.0% | |
TCCACTATGCACTTGTCCCC+AGG | - | chr2.4:63202051-63202070 | None:intergenic | 55.0% | |
TCCTGGGGACAAGTGCATAG+TGG | + | chr2.4:63202047-63202066 | MS.gene047479:intron | 55.0% | |
! | GGTTGGAGCACCAAGTGAAG+TGG | + | chr2.4:63200940-63200959 | MS.gene047479:intron | 55.0% |
! | TGGAGCACCAAGTGAAGTGG+TGG | + | chr2.4:63200943-63200962 | MS.gene047479:CDS | 55.0% |
!! | CTGGCTCTAGCAGAGTCAAC+AGG | + | chr2.4:63205500-63205519 | MS.gene047479:CDS | 55.0% |
GAAGCAGTAGAGTGCACGCG+GGG | - | chr2.4:63199760-63199779 | None:intergenic | 60.0% | |
! | ACGGCACTGGAAGCCTTCAG+AGG | + | chr2.4:63205568-63205587 | MS.gene047479:CDS | 60.0% |
! | GGGGGCGCAAGGAAAAGAGA+GGG | - | chr2.4:63203901-63203920 | None:intergenic | 60.0% |
! | TGGGGGCGCAAGGAAAAGAG+AGG | - | chr2.4:63203902-63203921 | None:intergenic | 60.0% |
TCACACAAGGGTCACCCGCC+CGG | - | chr2.4:63200073-63200092 | None:intergenic | 65.0% | |
! | GGTCACCCGCCCGGGTTTTA+TGG | - | chr2.4:63200064-63200083 | None:intergenic | 65.0% |
CACACAAGGGTCACCCGCCC+GGG | - | chr2.4:63200072-63200091 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.4 | gene | 63199623 | 63205691 | 63199623 | ID=MS.gene047479 |
chr2.4 | mRNA | 63199623 | 63205691 | 63199623 | ID=MS.gene047479.t1;Parent=MS.gene047479 |
chr2.4 | exon | 63199623 | 63199679 | 63199623 | ID=MS.gene047479.t1.exon1;Parent=MS.gene047479.t1 |
chr2.4 | CDS | 63199623 | 63199679 | 63199623 | ID=cds.MS.gene047479.t1;Parent=MS.gene047479.t1 |
chr2.4 | exon | 63199923 | 63199984 | 63199923 | ID=MS.gene047479.t1.exon2;Parent=MS.gene047479.t1 |
chr2.4 | CDS | 63199923 | 63199984 | 63199923 | ID=cds.MS.gene047479.t1;Parent=MS.gene047479.t1 |
chr2.4 | exon | 63200247 | 63200667 | 63200247 | ID=MS.gene047479.t1.exon3;Parent=MS.gene047479.t1 |
chr2.4 | CDS | 63200247 | 63200667 | 63200247 | ID=cds.MS.gene047479.t1;Parent=MS.gene047479.t1 |
chr2.4 | exon | 63200941 | 63201196 | 63200941 | ID=MS.gene047479.t1.exon4;Parent=MS.gene047479.t1 |
chr2.4 | CDS | 63200941 | 63201196 | 63200941 | ID=cds.MS.gene047479.t1;Parent=MS.gene047479.t1 |
chr2.4 | exon | 63204449 | 63204696 | 63204449 | ID=MS.gene047479.t1.exon5;Parent=MS.gene047479.t1 |
chr2.4 | CDS | 63204449 | 63204696 | 63204449 | ID=cds.MS.gene047479.t1;Parent=MS.gene047479.t1 |
chr2.4 | exon | 63205488 | 63205691 | 63205488 | ID=MS.gene047479.t1.exon6;Parent=MS.gene047479.t1 |
chr2.4 | CDS | 63205488 | 63205691 | 63205488 | ID=cds.MS.gene047479.t1;Parent=MS.gene047479.t1 |
Gene Sequence |
Protein sequence |