Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene047480.t1 | KEH36934.1 | 69.7 | 561 | 79 | 2 | 1 | 561 | 1 | 470 | 8.20E-173 | 617.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene047480.t1 | Q9FLX8 | 52.5 | 99 | 45 | 2 | 319 | 417 | 143 | 239 | 7.8e-23 | 110.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene047480.t1 | A0A072V4M0 | 69.7 | 561 | 79 | 2 | 1 | 561 | 1 | 470 | 5.9e-173 | 617.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene047480.t1 | TF | WRKY |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene047480.t1 | MTR_2g024380 | 89.744 | 312 | 32 | 0 | 250 | 561 | 159 | 470 | 0.0 | 593 |
MS.gene047480.t1 | MTR_2g024380 | 79.583 | 240 | 34 | 2 | 1 | 240 | 1 | 225 | 2.91e-96 | 301 |
MS.gene047480.t1 | MTR_2g024350 | 90.308 | 227 | 22 | 0 | 335 | 561 | 1 | 227 | 4.16e-151 | 432 |
MS.gene047480.t1 | MTR_6g053200 | 41.066 | 319 | 156 | 4 | 260 | 561 | 233 | 536 | 7.00e-71 | 237 |
MS.gene047480.t1 | MTR_6g053200 | 51.613 | 93 | 39 | 1 | 1 | 87 | 1 | 93 | 2.82e-15 | 79.0 |
MS.gene047480.t1 | MTR_7g104980 | 54.271 | 199 | 90 | 1 | 363 | 561 | 18 | 215 | 5.08e-59 | 196 |
MS.gene047480.t1 | MTR_8g067650 | 37.920 | 327 | 132 | 8 | 265 | 560 | 233 | 519 | 7.52e-57 | 199 |
MS.gene047480.t1 | MTR_8g067635 | 35.215 | 372 | 168 | 6 | 175 | 474 | 134 | 504 | 9.55e-56 | 196 |
MS.gene047480.t1 | MTR_8g069935 | 46.927 | 179 | 65 | 1 | 261 | 409 | 220 | 398 | 3.59e-45 | 166 |
MS.gene047480.t1 | MTR_8g069935 | 59.259 | 81 | 31 | 2 | 1 | 81 | 1 | 79 | 1.26e-12 | 70.5 |
MS.gene047480.t1 | MTR_1g099600 | 52.941 | 102 | 46 | 2 | 319 | 420 | 163 | 262 | 2.17e-30 | 121 |
MS.gene047480.t1 | MTR_7g079040 | 46.226 | 106 | 56 | 1 | 311 | 416 | 123 | 227 | 3.06e-25 | 107 |
MS.gene047480.t1 | MTR_8g028565 | 49.038 | 104 | 48 | 3 | 319 | 420 | 134 | 234 | 4.13e-25 | 107 |
MS.gene047480.t1 | MTR_7g105000 | 42.667 | 150 | 48 | 3 | 241 | 362 | 201 | 340 | 7.28e-24 | 103 |
MS.gene047480.t1 | MTR_7g105000 | 54.762 | 84 | 37 | 1 | 1 | 84 | 1 | 83 | 4.24e-11 | 65.1 |
MS.gene047480.t1 | MTR_1g070455 | 66.102 | 59 | 20 | 0 | 343 | 401 | 294 | 352 | 3.29e-22 | 99.0 |
MS.gene047480.t1 | MTR_4g052030 | 68.852 | 61 | 7 | 1 | 340 | 400 | 3 | 51 | 3.88e-21 | 87.0 |
MS.gene047480.t1 | MTR_8g098945 | 53.425 | 73 | 33 | 1 | 343 | 415 | 130 | 201 | 8.99e-21 | 92.8 |
MS.gene047480.t1 | MTR_3g108960 | 42.857 | 91 | 51 | 1 | 318 | 407 | 289 | 379 | 9.80e-21 | 95.1 |
MS.gene047480.t1 | MTR_8g087000 | 60.000 | 60 | 24 | 0 | 343 | 402 | 78 | 137 | 1.40e-20 | 91.7 |
MS.gene047480.t1 | MTR_4g094908 | 36.232 | 138 | 69 | 4 | 277 | 400 | 192 | 324 | 1.48e-20 | 93.6 |
MS.gene047480.t1 | MTR_4g127040 | 57.143 | 63 | 27 | 0 | 339 | 401 | 242 | 304 | 1.71e-20 | 92.8 |
MS.gene047480.t1 | MTR_8g087000 | 60.000 | 60 | 24 | 0 | 343 | 402 | 77 | 136 | 1.81e-20 | 91.3 |
MS.gene047480.t1 | MTR_2g032030 | 52.778 | 72 | 33 | 1 | 343 | 414 | 268 | 338 | 2.04e-20 | 94.4 |
MS.gene047480.t1 | MTR_2g032030 | 52.778 | 72 | 33 | 1 | 343 | 414 | 268 | 338 | 3.67e-20 | 94.0 |
MS.gene047480.t1 | MTR_2g083870 | 60.000 | 60 | 24 | 0 | 343 | 402 | 81 | 140 | 7.91e-20 | 89.7 |
MS.gene047480.t1 | MTR_5g016610 | 60.345 | 58 | 23 | 0 | 343 | 400 | 200 | 257 | 8.21e-20 | 90.1 |
MS.gene047480.t1 | MTR_2g016770 | 60.000 | 60 | 24 | 0 | 343 | 402 | 36 | 95 | 1.53e-19 | 87.8 |
MS.gene047480.t1 | MTR_2g016770 | 60.000 | 60 | 24 | 0 | 343 | 402 | 28 | 87 | 1.58e-19 | 87.8 |
MS.gene047480.t1 | MTR_1g009613 | 63.158 | 57 | 21 | 0 | 343 | 399 | 263 | 319 | 3.71e-19 | 89.4 |
MS.gene047480.t1 | MTR_7g109600 | 50.725 | 69 | 34 | 0 | 335 | 403 | 46 | 114 | 2.82e-18 | 85.5 |
MS.gene047480.t1 | MTR_1g086790 | 43.333 | 90 | 49 | 2 | 322 | 411 | 139 | 226 | 4.80e-18 | 85.9 |
MS.gene047480.t1 | MTR_0117s0040 | 53.125 | 64 | 30 | 0 | 336 | 399 | 68 | 131 | 5.40e-18 | 84.0 |
MS.gene047480.t1 | MTR_2g045360 | 35.345 | 116 | 69 | 1 | 287 | 402 | 162 | 271 | 8.27e-18 | 86.3 |
MS.gene047480.t1 | MTR_3g053330 | 50.000 | 60 | 30 | 0 | 343 | 402 | 252 | 311 | 2.57e-17 | 85.1 |
MS.gene047480.t1 | MTR_4g094588 | 48.684 | 76 | 37 | 2 | 328 | 403 | 165 | 238 | 9.13e-17 | 82.0 |
MS.gene047480.t1 | MTR_7g100510 | 49.425 | 87 | 42 | 2 | 327 | 413 | 174 | 258 | 1.11e-16 | 83.2 |
MS.gene047480.t1 | MTR_7g100510 | 37.624 | 101 | 48 | 2 | 319 | 405 | 324 | 423 | 3.23e-15 | 78.6 |
MS.gene047480.t1 | MTR_3g106060 | 50.847 | 59 | 29 | 0 | 342 | 400 | 138 | 196 | 1.62e-16 | 80.9 |
MS.gene047480.t1 | MTR_7g011820 | 53.731 | 67 | 30 | 1 | 337 | 403 | 405 | 470 | 2.59e-16 | 82.4 |
MS.gene047480.t1 | MTR_7g011820 | 50.704 | 71 | 33 | 2 | 338 | 408 | 224 | 292 | 1.70e-15 | 79.7 |
MS.gene047480.t1 | MTR_3g056100 | 47.945 | 73 | 37 | 1 | 335 | 407 | 395 | 466 | 3.41e-16 | 82.0 |
MS.gene047480.t1 | MTR_3g056100 | 37.374 | 99 | 56 | 3 | 338 | 432 | 239 | 335 | 3.21e-11 | 66.2 |
MS.gene047480.t1 | MTR_7g110720 | 48.485 | 66 | 34 | 0 | 337 | 402 | 184 | 249 | 3.67e-16 | 81.3 |
MS.gene047480.t1 | MTR_3g056100 | 47.945 | 73 | 37 | 1 | 335 | 407 | 408 | 479 | 3.92e-16 | 82.0 |
MS.gene047480.t1 | MTR_3g056100 | 43.243 | 74 | 40 | 2 | 338 | 411 | 239 | 310 | 3.72e-11 | 66.2 |
MS.gene047480.t1 | MTR_7g110720 | 48.485 | 66 | 34 | 0 | 337 | 402 | 211 | 276 | 4.39e-16 | 81.3 |
MS.gene047480.t1 | MTR_5g094430 | 50.000 | 68 | 33 | 1 | 335 | 402 | 357 | 423 | 4.66e-16 | 81.6 |
MS.gene047480.t1 | MTR_5g094430 | 48.387 | 62 | 30 | 2 | 341 | 402 | 199 | 258 | 6.60e-11 | 65.5 |
MS.gene047480.t1 | MTR_3g056100 | 47.945 | 73 | 37 | 1 | 335 | 407 | 251 | 322 | 5.49e-16 | 80.9 |
MS.gene047480.t1 | MTR_3g056100 | 37.374 | 99 | 56 | 3 | 338 | 432 | 95 | 191 | 5.84e-11 | 65.1 |
MS.gene047480.t1 | MTR_3g056100 | 47.945 | 73 | 37 | 1 | 335 | 407 | 264 | 335 | 5.86e-16 | 80.9 |
MS.gene047480.t1 | MTR_3g056100 | 37.234 | 94 | 53 | 3 | 338 | 427 | 95 | 186 | 6.63e-11 | 65.1 |
MS.gene047480.t1 | MTR_5g094430 | 49.275 | 69 | 34 | 1 | 335 | 403 | 245 | 312 | 6.57e-16 | 80.5 |
MS.gene047480.t1 | MTR_5g094430 | 48.387 | 62 | 30 | 2 | 341 | 402 | 87 | 146 | 9.68e-11 | 64.3 |
MS.gene047480.t1 | MTR_5g094430 | 49.275 | 69 | 34 | 1 | 335 | 403 | 223 | 290 | 7.05e-16 | 80.5 |
MS.gene047480.t1 | MTR_5g042920 | 50.704 | 71 | 34 | 1 | 337 | 407 | 315 | 384 | 8.01e-16 | 80.5 |
MS.gene047480.t1 | MTR_5g042920 | 52.174 | 69 | 31 | 2 | 338 | 406 | 147 | 213 | 2.66e-14 | 75.5 |
MS.gene047480.t1 | MTR_1g013790 | 47.541 | 61 | 32 | 0 | 342 | 402 | 101 | 161 | 8.42e-16 | 77.8 |
MS.gene047480.t1 | MTR_4g132430 | 45.455 | 66 | 36 | 0 | 337 | 402 | 122 | 187 | 1.47e-15 | 79.0 |
MS.gene047480.t1 | MTR_2g088000 | 46.970 | 66 | 35 | 0 | 337 | 402 | 344 | 409 | 2.12e-15 | 79.7 |
MS.gene047480.t1 | MTR_4g082580 | 49.275 | 69 | 34 | 1 | 339 | 407 | 275 | 342 | 2.24e-15 | 78.6 |
MS.gene047480.t1 | MTR_4g082580 | 39.796 | 98 | 47 | 3 | 338 | 426 | 141 | 235 | 1.31e-11 | 67.0 |
MS.gene047480.t1 | MTR_3g031220 | 56.061 | 66 | 27 | 2 | 341 | 406 | 197 | 260 | 2.80e-15 | 78.2 |
MS.gene047480.t1 | MTR_2g023930 | 45.455 | 66 | 36 | 0 | 337 | 402 | 300 | 365 | 3.10e-15 | 79.0 |
MS.gene047480.t1 | MTR_3g009470 | 50.000 | 72 | 34 | 2 | 341 | 412 | 279 | 348 | 3.18e-15 | 79.3 |
MS.gene047480.t1 | MTR_3g009470 | 49.254 | 67 | 33 | 1 | 337 | 403 | 490 | 555 | 3.26e-14 | 76.3 |
MS.gene047480.t1 | MTR_3g031220 | 56.061 | 66 | 27 | 2 | 341 | 406 | 197 | 260 | 3.89e-15 | 78.6 |
MS.gene047480.t1 | MTR_3g031220 | 50.820 | 61 | 29 | 1 | 343 | 403 | 366 | 425 | 1.01e-13 | 74.3 |
MS.gene047480.t1 | MTR_4g007060 | 47.541 | 61 | 32 | 0 | 342 | 402 | 128 | 188 | 4.31e-15 | 76.3 |
MS.gene047480.t1 | MTR_3g009470 | 50.000 | 72 | 34 | 2 | 341 | 412 | 279 | 348 | 4.82e-15 | 78.2 |
MS.gene047480.t1 | MTR_4g007060 | 47.541 | 61 | 32 | 0 | 342 | 402 | 162 | 222 | 4.85e-15 | 76.6 |
MS.gene047480.t1 | MTR_4g132430 | 45.455 | 66 | 36 | 0 | 337 | 402 | 256 | 321 | 5.04e-15 | 78.2 |
MS.gene047480.t1 | MTR_4g107970 | 50.000 | 60 | 30 | 0 | 343 | 402 | 179 | 238 | 5.96e-15 | 78.2 |
MS.gene047480.t1 | MTR_2g033820 | 44.737 | 76 | 40 | 2 | 328 | 403 | 190 | 263 | 6.85e-15 | 77.0 |
MS.gene047480.t1 | MTR_7g062220 | 43.182 | 88 | 42 | 4 | 329 | 415 | 113 | 193 | 7.54e-15 | 76.3 |
MS.gene047480.t1 | MTR_5g074400 | 50.769 | 65 | 31 | 1 | 339 | 403 | 417 | 480 | 8.61e-15 | 77.8 |
MS.gene047480.t1 | MTR_5g074400 | 56.452 | 62 | 25 | 2 | 341 | 402 | 242 | 301 | 4.67e-14 | 75.5 |
MS.gene047480.t1 | MTR_4g049790 | 42.857 | 77 | 44 | 0 | 337 | 413 | 307 | 383 | 8.92e-15 | 77.8 |
MS.gene047480.t1 | MTR_4g049760 | 45.070 | 71 | 39 | 0 | 343 | 413 | 291 | 361 | 9.19e-15 | 77.4 |
MS.gene047480.t1 | MTR_4g107970 | 50.000 | 60 | 30 | 0 | 343 | 402 | 256 | 315 | 1.06e-14 | 77.4 |
MS.gene047480.t1 | MTR_7g080020 | 46.341 | 82 | 42 | 2 | 332 | 413 | 270 | 349 | 1.09e-14 | 77.8 |
MS.gene047480.t1 | MTR_7g080020 | 44.000 | 75 | 41 | 1 | 339 | 413 | 490 | 563 | 4.43e-14 | 75.9 |
MS.gene047480.t1 | MTR_5g043880 | 38.776 | 98 | 58 | 2 | 313 | 410 | 96 | 191 | 1.63e-14 | 74.7 |
MS.gene047480.t1 | MTR_4g130900 | 46.269 | 67 | 35 | 1 | 340 | 406 | 357 | 422 | 1.63e-14 | 76.6 |
MS.gene047480.t1 | MTR_7g109800 | 38.889 | 90 | 53 | 2 | 321 | 410 | 125 | 212 | 1.68e-14 | 74.7 |
MS.gene047480.t1 | MTR_7g009730 | 50.877 | 57 | 28 | 0 | 343 | 399 | 220 | 276 | 1.81e-14 | 76.6 |
MS.gene047480.t1 | MTR_5g097490 | 51.471 | 68 | 31 | 2 | 338 | 405 | 88 | 153 | 1.85e-14 | 75.9 |
MS.gene047480.t1 | MTR_5g097490 | 49.254 | 67 | 33 | 1 | 337 | 403 | 247 | 312 | 2.65e-14 | 75.5 |
MS.gene047480.t1 | MTR_4g094412 | 50.000 | 60 | 30 | 0 | 343 | 402 | 235 | 294 | 2.41e-14 | 75.9 |
MS.gene047480.t1 | MTR_4g094412 | 50.000 | 60 | 30 | 0 | 343 | 402 | 244 | 303 | 2.96e-14 | 75.9 |
MS.gene047480.t1 | MTR_7g071120 | 49.315 | 73 | 35 | 2 | 334 | 406 | 158 | 228 | 3.85e-14 | 75.5 |
MS.gene047480.t1 | MTR_7g071120 | 51.667 | 60 | 28 | 1 | 343 | 402 | 325 | 383 | 6.55e-12 | 68.6 |
MS.gene047480.t1 | MTR_2g033110 | 46.961 | 181 | 55 | 4 | 1 | 144 | 1 | 177 | 5.81e-14 | 71.2 |
MS.gene047480.t1 | MTR_7g080000 | 42.268 | 97 | 49 | 3 | 342 | 438 | 234 | 323 | 6.66e-14 | 75.1 |
MS.gene047480.t1 | MTR_7g080000 | 50.820 | 61 | 29 | 1 | 343 | 403 | 433 | 492 | 1.73e-13 | 73.9 |
MS.gene047480.t1 | MTR_3g095040 | 43.750 | 64 | 35 | 1 | 339 | 402 | 115 | 177 | 1.02e-13 | 70.9 |
MS.gene047480.t1 | MTR_5g091390 | 46.774 | 62 | 32 | 1 | 342 | 403 | 157 | 217 | 1.06e-13 | 72.8 |
MS.gene047480.t1 | MTR_2g105060 | 45.161 | 62 | 34 | 0 | 342 | 403 | 94 | 155 | 1.16e-13 | 71.2 |
MS.gene047480.t1 | MTR_1g013760 | 46.552 | 58 | 31 | 0 | 343 | 400 | 141 | 198 | 1.25e-13 | 72.0 |
MS.gene047480.t1 | MTR_4g013260 | 48.485 | 66 | 33 | 1 | 337 | 402 | 331 | 395 | 1.36e-13 | 73.6 |
MS.gene047480.t1 | MTR_4g013260 | 42.857 | 77 | 43 | 1 | 326 | 402 | 168 | 243 | 1.18e-12 | 70.9 |
MS.gene047480.t1 | MTR_2g105060 | 45.161 | 62 | 34 | 0 | 342 | 403 | 169 | 230 | 1.93e-13 | 72.0 |
MS.gene047480.t1 | MTR_1g015140 | 45.902 | 61 | 32 | 1 | 339 | 399 | 99 | 158 | 6.17e-13 | 67.4 |
MS.gene047480.t1 | MTR_8g092010 | 43.939 | 66 | 36 | 1 | 337 | 402 | 103 | 167 | 6.25e-13 | 67.8 |
MS.gene047480.t1 | MTR_4g122530 | 39.130 | 69 | 41 | 1 | 343 | 411 | 209 | 276 | 6.95e-13 | 71.2 |
MS.gene047480.t1 | MTR_8g007270 | 50.000 | 58 | 28 | 1 | 343 | 400 | 155 | 211 | 7.78e-13 | 68.6 |
MS.gene047480.t1 | MTR_7g079010 | 45.161 | 62 | 33 | 1 | 338 | 399 | 137 | 197 | 8.96e-13 | 68.2 |
MS.gene047480.t1 | MTR_3g095080 | 40.845 | 71 | 39 | 2 | 332 | 400 | 156 | 225 | 1.00e-12 | 68.6 |
MS.gene047480.t1 | MTR_8g092140 | 46.552 | 58 | 30 | 1 | 343 | 400 | 161 | 217 | 1.24e-12 | 68.2 |
MS.gene047480.t1 | MTR_3g095080 | 40.845 | 71 | 39 | 2 | 332 | 400 | 132 | 201 | 1.72e-12 | 67.4 |
MS.gene047480.t1 | MTR_7g028415 | 42.623 | 61 | 34 | 1 | 339 | 399 | 90 | 149 | 5.00e-12 | 65.1 |
MS.gene047480.t1 | MTR_7g028710 | 42.623 | 61 | 34 | 1 | 339 | 399 | 90 | 149 | 5.00e-12 | 65.1 |
MS.gene047480.t1 | MTR_1g078260 | 31.667 | 120 | 59 | 4 | 318 | 415 | 209 | 327 | 6.61e-12 | 68.2 |
MS.gene047480.t1 | MTR_5g067680 | 48.276 | 58 | 28 | 1 | 342 | 397 | 202 | 259 | 8.36e-12 | 67.4 |
MS.gene047480.t1 | MTR_1g077780 | 46.154 | 65 | 34 | 1 | 339 | 403 | 59 | 122 | 1.25e-11 | 63.2 |
MS.gene047480.t1 | MTR_6g086555 | 43.662 | 71 | 37 | 3 | 337 | 406 | 202 | 270 | 2.32e-11 | 66.2 |
MS.gene047480.t1 | MTR_3g104750 | 44.444 | 63 | 34 | 1 | 337 | 399 | 99 | 160 | 3.18e-11 | 62.4 |
MS.gene047480.t1 | MTR_8g099350 | 36.471 | 85 | 48 | 2 | 319 | 397 | 105 | 189 | 7.25e-11 | 64.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene047480.t1 | AT5G52830 | 52.525 | 99 | 45 | 2 | 319 | 417 | 143 | 239 | 5.02e-27 | 112 |
MS.gene047480.t1 | AT4G01250 | 46.392 | 97 | 51 | 1 | 320 | 416 | 106 | 201 | 3.09e-25 | 106 |
MS.gene047480.t1 | AT5G28650 | 64.407 | 59 | 21 | 0 | 343 | 401 | 263 | 321 | 6.18e-22 | 97.4 |
MS.gene047480.t1 | AT4G24240 | 44.231 | 104 | 54 | 2 | 301 | 400 | 236 | 339 | 8.22e-22 | 97.4 |
MS.gene047480.t1 | AT3G04670 | 64.407 | 59 | 21 | 0 | 343 | 401 | 263 | 321 | 1.08e-21 | 96.7 |
MS.gene047480.t1 | AT2G24570 | 59.091 | 66 | 27 | 0 | 343 | 408 | 244 | 309 | 2.41e-21 | 95.5 |
MS.gene047480.t1 | AT4G23550 | 46.154 | 91 | 48 | 1 | 326 | 416 | 124 | 213 | 2.97e-21 | 95.1 |
MS.gene047480.t1 | AT4G31550 | 44.681 | 94 | 49 | 1 | 318 | 408 | 218 | 311 | 4.15e-21 | 95.1 |
MS.gene047480.t1 | AT4G31550 | 57.576 | 66 | 28 | 0 | 343 | 408 | 247 | 312 | 4.85e-21 | 94.7 |
MS.gene047480.t1 | AT5G45050 | 43.878 | 98 | 53 | 2 | 315 | 411 | 1013 | 1109 | 1.02e-20 | 97.4 |
MS.gene047480.t1 | AT5G45050 | 43.878 | 98 | 53 | 2 | 315 | 411 | 1152 | 1248 | 1.12e-20 | 97.1 |
MS.gene047480.t1 | AT5G45050 | 43.878 | 98 | 53 | 2 | 315 | 411 | 1124 | 1220 | 1.24e-20 | 97.1 |
MS.gene047480.t1 | AT2G30590 | 41.026 | 117 | 65 | 2 | 288 | 401 | 257 | 372 | 1.95e-20 | 94.0 |
MS.gene047480.t1 | AT2G23320 | 62.069 | 58 | 22 | 0 | 343 | 400 | 241 | 298 | 2.29e-20 | 92.8 |
MS.gene047480.t1 | AT2G34830 | 55.072 | 69 | 30 | 1 | 343 | 411 | 216 | 283 | 6.33e-20 | 92.8 |
MS.gene047480.t1 | AT2G34830 | 55.072 | 69 | 30 | 1 | 343 | 411 | 225 | 292 | 7.09e-20 | 92.8 |
MS.gene047480.t1 | AT1G29280 | 45.055 | 91 | 41 | 1 | 321 | 402 | 44 | 134 | 1.81e-19 | 89.0 |
MS.gene047480.t1 | AT1G30650 | 53.623 | 69 | 31 | 1 | 343 | 411 | 218 | 285 | 5.00e-19 | 90.1 |
MS.gene047480.t1 | AT3G58710 | 37.391 | 115 | 58 | 2 | 343 | 443 | 71 | 185 | 7.16e-19 | 87.4 |
MS.gene047480.t1 | AT3G58710 | 37.391 | 115 | 58 | 2 | 343 | 443 | 72 | 186 | 7.49e-19 | 87.4 |
MS.gene047480.t1 | AT3G01080 | 54.545 | 66 | 29 | 1 | 337 | 402 | 339 | 403 | 6.03e-17 | 84.0 |
MS.gene047480.t1 | AT3G01080 | 40.206 | 97 | 47 | 4 | 338 | 429 | 201 | 291 | 1.42e-14 | 76.6 |
MS.gene047480.t1 | AT3G01080 | 54.545 | 66 | 29 | 1 | 337 | 402 | 301 | 365 | 8.61e-17 | 83.2 |
MS.gene047480.t1 | AT3G01080 | 40.206 | 97 | 47 | 4 | 338 | 429 | 163 | 253 | 1.76e-14 | 76.3 |
MS.gene047480.t1 | AT2G47260 | 36.667 | 120 | 65 | 3 | 321 | 440 | 154 | 262 | 2.29e-16 | 80.9 |
MS.gene047480.t1 | AT2G03340 | 53.030 | 66 | 30 | 1 | 337 | 402 | 410 | 474 | 2.38e-16 | 82.4 |
MS.gene047480.t1 | AT2G03340 | 48.571 | 70 | 34 | 2 | 338 | 407 | 246 | 313 | 3.17e-13 | 72.8 |
MS.gene047480.t1 | AT4G22070 | 50.000 | 60 | 30 | 0 | 343 | 402 | 298 | 357 | 7.85e-16 | 80.9 |
MS.gene047480.t1 | AT4G22070 | 50.000 | 60 | 30 | 0 | 343 | 402 | 298 | 357 | 7.85e-16 | 80.9 |
MS.gene047480.t1 | AT4G22070 | 50.000 | 60 | 30 | 0 | 343 | 402 | 298 | 357 | 7.85e-16 | 80.9 |
MS.gene047480.t1 | AT4G22070 | 50.000 | 60 | 30 | 0 | 343 | 402 | 298 | 357 | 7.85e-16 | 80.9 |
MS.gene047480.t1 | AT1G62300 | 50.000 | 60 | 30 | 0 | 343 | 402 | 313 | 372 | 8.36e-16 | 80.9 |
MS.gene047480.t1 | AT1G69810 | 44.872 | 78 | 42 | 1 | 337 | 413 | 140 | 217 | 8.92e-16 | 79.3 |
MS.gene047480.t1 | AT1G69810 | 45.833 | 72 | 38 | 1 | 343 | 413 | 204 | 275 | 1.09e-15 | 79.7 |
MS.gene047480.t1 | AT1G13960 | 51.515 | 66 | 31 | 1 | 337 | 402 | 404 | 468 | 1.37e-15 | 80.1 |
MS.gene047480.t1 | AT1G13960 | 45.570 | 79 | 37 | 3 | 324 | 402 | 215 | 287 | 2.74e-13 | 72.8 |
MS.gene047480.t1 | AT4G04450 | 50.000 | 60 | 30 | 0 | 343 | 402 | 199 | 258 | 1.55e-15 | 79.3 |
MS.gene047480.t1 | AT2G38470 | 50.000 | 76 | 36 | 2 | 327 | 402 | 169 | 242 | 2.31e-15 | 79.3 |
MS.gene047480.t1 | AT2G38470 | 55.000 | 60 | 26 | 1 | 343 | 402 | 363 | 421 | 6.64e-15 | 77.8 |
MS.gene047480.t1 | AT4G04450 | 50.000 | 60 | 30 | 0 | 343 | 402 | 293 | 352 | 2.58e-15 | 79.3 |
MS.gene047480.t1 | AT1G13960 | 51.515 | 66 | 31 | 1 | 337 | 402 | 251 | 315 | 3.19e-15 | 77.8 |
MS.gene047480.t1 | AT1G13960 | 45.570 | 79 | 37 | 3 | 324 | 402 | 62 | 134 | 9.71e-13 | 70.5 |
MS.gene047480.t1 | AT3G01080 | 40.206 | 97 | 47 | 4 | 338 | 429 | 201 | 291 | 4.48e-15 | 77.0 |
MS.gene047480.t1 | AT4G18170 | 43.902 | 82 | 44 | 2 | 322 | 403 | 153 | 232 | 4.60e-15 | 77.0 |
MS.gene047480.t1 | AT4G26640 | 47.826 | 69 | 35 | 1 | 335 | 403 | 334 | 401 | 4.81e-15 | 78.6 |
MS.gene047480.t1 | AT4G26640 | 37.143 | 105 | 59 | 4 | 340 | 441 | 169 | 269 | 4.14e-11 | 65.9 |
MS.gene047480.t1 | AT4G26640 | 47.826 | 69 | 35 | 1 | 335 | 403 | 374 | 441 | 5.95e-15 | 78.2 |
MS.gene047480.t1 | AT4G26640 | 37.143 | 105 | 59 | 4 | 340 | 441 | 209 | 309 | 4.40e-11 | 65.9 |
MS.gene047480.t1 | AT1G29860 | 46.053 | 76 | 39 | 2 | 328 | 403 | 123 | 196 | 6.05e-15 | 75.9 |
MS.gene047480.t1 | AT4G26640 | 47.826 | 69 | 35 | 1 | 335 | 403 | 198 | 265 | 6.48e-15 | 77.0 |
MS.gene047480.t1 | AT4G26640 | 37.143 | 105 | 59 | 4 | 340 | 441 | 33 | 133 | 5.99e-11 | 65.1 |
MS.gene047480.t1 | AT4G26640 | 47.826 | 69 | 35 | 1 | 335 | 403 | 198 | 265 | 6.48e-15 | 77.0 |
MS.gene047480.t1 | AT4G26640 | 37.143 | 105 | 59 | 4 | 340 | 441 | 33 | 133 | 5.99e-11 | 65.1 |
MS.gene047480.t1 | AT4G26640 | 47.826 | 69 | 35 | 1 | 335 | 403 | 198 | 265 | 6.48e-15 | 77.0 |
MS.gene047480.t1 | AT4G26640 | 37.143 | 105 | 59 | 4 | 340 | 441 | 33 | 133 | 5.99e-11 | 65.1 |
MS.gene047480.t1 | AT4G26640 | 47.826 | 69 | 35 | 1 | 335 | 403 | 198 | 265 | 6.48e-15 | 77.0 |
MS.gene047480.t1 | AT4G26640 | 37.143 | 105 | 59 | 4 | 340 | 441 | 33 | 133 | 5.99e-11 | 65.1 |
MS.gene047480.t1 | AT4G26640 | 47.826 | 69 | 35 | 1 | 335 | 403 | 302 | 369 | 6.49e-15 | 77.8 |
MS.gene047480.t1 | AT4G26640 | 37.143 | 105 | 59 | 4 | 340 | 441 | 137 | 237 | 5.27e-11 | 65.5 |
MS.gene047480.t1 | AT2G04880 | 51.667 | 60 | 28 | 1 | 343 | 402 | 308 | 366 | 8.37e-15 | 77.4 |
MS.gene047480.t1 | AT5G43290 | 55.000 | 60 | 26 | 1 | 340 | 399 | 112 | 170 | 8.48e-15 | 75.5 |
MS.gene047480.t1 | AT2G04880 | 51.667 | 60 | 28 | 1 | 343 | 402 | 284 | 342 | 9.34e-15 | 77.4 |
MS.gene047480.t1 | AT1G18860 | 50.000 | 60 | 30 | 0 | 343 | 402 | 240 | 299 | 1.36e-14 | 77.0 |
MS.gene047480.t1 | AT1G64000 | 44.444 | 63 | 34 | 1 | 337 | 399 | 109 | 170 | 1.37e-14 | 73.2 |
MS.gene047480.t1 | AT1G69310 | 39.130 | 92 | 54 | 2 | 319 | 410 | 125 | 214 | 1.73e-14 | 74.7 |
MS.gene047480.t1 | AT1G69310 | 39.130 | 92 | 54 | 2 | 319 | 410 | 125 | 214 | 1.73e-14 | 74.7 |
MS.gene047480.t1 | AT1G69310 | 39.130 | 92 | 54 | 2 | 319 | 410 | 125 | 214 | 1.73e-14 | 74.7 |
MS.gene047480.t1 | AT5G07100 | 48.529 | 68 | 34 | 1 | 343 | 410 | 235 | 301 | 1.87e-14 | 75.1 |
MS.gene047480.t1 | AT5G07100 | 35.345 | 116 | 68 | 3 | 335 | 444 | 110 | 224 | 5.13e-13 | 70.5 |
MS.gene047480.t1 | AT1G80840 | 43.548 | 62 | 35 | 0 | 342 | 403 | 146 | 207 | 2.12e-14 | 74.7 |
MS.gene047480.t1 | AT5G15130 | 48.333 | 60 | 31 | 0 | 343 | 402 | 186 | 245 | 2.22e-14 | 76.3 |
MS.gene047480.t1 | AT5G15130 | 48.333 | 60 | 31 | 0 | 343 | 402 | 228 | 287 | 2.40e-14 | 76.3 |
MS.gene047480.t1 | AT5G46350 | 44.737 | 76 | 40 | 2 | 328 | 403 | 170 | 243 | 2.76e-14 | 74.7 |
MS.gene047480.t1 | AT2G37260 | 40.476 | 84 | 46 | 2 | 319 | 399 | 323 | 405 | 2.86e-14 | 75.5 |
MS.gene047480.t1 | AT2G37260 | 54.545 | 66 | 28 | 2 | 338 | 403 | 161 | 224 | 2.93e-14 | 75.5 |
MS.gene047480.t1 | AT5G26170 | 50.000 | 64 | 31 | 1 | 337 | 400 | 108 | 170 | 3.02e-14 | 71.6 |
MS.gene047480.t1 | AT1G68150 | 50.000 | 60 | 30 | 0 | 343 | 402 | 236 | 295 | 3.14e-14 | 75.1 |
MS.gene047480.t1 | AT2G30250 | 50.820 | 61 | 29 | 1 | 343 | 403 | 329 | 388 | 3.96e-14 | 74.7 |
MS.gene047480.t1 | AT2G30250 | 45.570 | 79 | 40 | 3 | 328 | 406 | 153 | 228 | 1.59e-12 | 69.7 |
MS.gene047480.t1 | AT4G30935 | 47.692 | 65 | 33 | 1 | 343 | 407 | 332 | 395 | 4.19e-14 | 75.1 |
MS.gene047480.t1 | AT5G07100 | 48.529 | 68 | 34 | 1 | 343 | 410 | 142 | 208 | 4.60e-14 | 72.0 |
MS.gene047480.t1 | AT5G07100 | 35.345 | 116 | 68 | 3 | 335 | 444 | 17 | 131 | 1.52e-12 | 67.4 |
MS.gene047480.t1 | AT5G07100 | 48.529 | 68 | 34 | 1 | 343 | 410 | 142 | 208 | 4.60e-14 | 72.0 |
MS.gene047480.t1 | AT5G07100 | 35.345 | 116 | 68 | 3 | 335 | 444 | 17 | 131 | 1.52e-12 | 67.4 |
MS.gene047480.t1 | AT5G07100 | 48.529 | 68 | 34 | 1 | 343 | 410 | 142 | 208 | 4.60e-14 | 72.0 |
MS.gene047480.t1 | AT5G07100 | 35.345 | 116 | 68 | 3 | 335 | 444 | 17 | 131 | 1.52e-12 | 67.4 |
MS.gene047480.t1 | AT5G07100 | 48.529 | 68 | 34 | 1 | 343 | 410 | 142 | 208 | 4.60e-14 | 72.0 |
MS.gene047480.t1 | AT5G07100 | 35.345 | 116 | 68 | 3 | 335 | 444 | 17 | 131 | 1.52e-12 | 67.4 |
MS.gene047480.t1 | AT2G37260 | 54.545 | 66 | 28 | 2 | 338 | 403 | 81 | 144 | 4.81e-14 | 74.3 |
MS.gene047480.t1 | AT2G37260 | 40.476 | 84 | 46 | 2 | 319 | 399 | 243 | 325 | 4.94e-14 | 74.3 |
MS.gene047480.t1 | AT2G37260 | 40.476 | 84 | 46 | 2 | 319 | 399 | 241 | 323 | 5.04e-14 | 73.9 |
MS.gene047480.t1 | AT2G37260 | 54.545 | 66 | 28 | 2 | 338 | 403 | 79 | 142 | 5.13e-14 | 73.9 |
MS.gene047480.t1 | AT4G31800 | 44.262 | 61 | 34 | 0 | 342 | 402 | 111 | 171 | 5.75e-14 | 72.4 |
MS.gene047480.t1 | AT5G56270 | 52.459 | 61 | 28 | 1 | 343 | 403 | 488 | 547 | 6.18e-14 | 75.5 |
MS.gene047480.t1 | AT5G56270 | 50.000 | 66 | 31 | 2 | 341 | 406 | 272 | 335 | 3.87e-13 | 72.8 |
MS.gene047480.t1 | AT4G01720 | 48.333 | 60 | 31 | 0 | 343 | 402 | 240 | 299 | 6.21e-14 | 74.7 |
MS.gene047480.t1 | AT5G41570 | 44.444 | 63 | 34 | 1 | 337 | 399 | 93 | 154 | 6.86e-14 | 70.5 |
MS.gene047480.t1 | AT5G49520 | 48.333 | 60 | 30 | 1 | 343 | 402 | 222 | 280 | 1.11e-13 | 73.6 |
MS.gene047480.t1 | AT4G31800 | 44.262 | 61 | 34 | 0 | 342 | 402 | 176 | 236 | 1.27e-13 | 72.4 |
MS.gene047480.t1 | AT4G26440 | 46.575 | 73 | 37 | 2 | 341 | 413 | 177 | 247 | 1.75e-13 | 73.6 |
MS.gene047480.t1 | AT4G26440 | 42.254 | 71 | 40 | 1 | 343 | 413 | 373 | 442 | 1.63e-11 | 67.4 |
MS.gene047480.t1 | AT3G62340 | 38.636 | 88 | 46 | 3 | 343 | 429 | 119 | 199 | 1.80e-13 | 71.6 |
MS.gene047480.t1 | AT2G44745 | 50.877 | 57 | 27 | 1 | 343 | 399 | 146 | 201 | 2.70e-13 | 69.7 |
MS.gene047480.t1 | AT1G55600 | 41.096 | 73 | 41 | 2 | 331 | 402 | 295 | 366 | 9.10e-13 | 71.2 |
MS.gene047480.t1 | AT2G21900 | 47.541 | 61 | 31 | 1 | 343 | 403 | 110 | 169 | 9.25e-13 | 67.8 |
MS.gene047480.t1 | AT2G25000 | 42.623 | 61 | 35 | 0 | 342 | 402 | 103 | 163 | 1.47e-12 | 67.8 |
MS.gene047480.t1 | AT2G25000 | 42.623 | 61 | 35 | 0 | 342 | 402 | 103 | 163 | 1.47e-12 | 67.8 |
MS.gene047480.t1 | AT5G45260 | 46.970 | 66 | 33 | 1 | 343 | 406 | 1209 | 1274 | 1.52e-12 | 71.2 |
MS.gene047480.t1 | AT2G25000 | 42.623 | 61 | 35 | 0 | 342 | 402 | 125 | 185 | 1.63e-12 | 68.2 |
MS.gene047480.t1 | AT4G39410 | 40.845 | 71 | 39 | 2 | 332 | 400 | 211 | 280 | 4.70e-12 | 67.8 |
MS.gene047480.t1 | AT2G25000 | 42.623 | 61 | 35 | 0 | 342 | 402 | 146 | 206 | 4.86e-12 | 67.0 |
MS.gene047480.t1 | AT3G01970 | 47.692 | 65 | 31 | 2 | 343 | 405 | 66 | 129 | 5.44e-12 | 64.3 |
MS.gene047480.t1 | AT5G13080 | 43.860 | 57 | 31 | 1 | 343 | 399 | 68 | 123 | 6.55e-12 | 63.9 |
MS.gene047480.t1 | AT4G12020 | 31.250 | 176 | 92 | 7 | 338 | 512 | 397 | 544 | 1.73e-11 | 67.8 |
MS.gene047480.t1 | AT4G12020 | 31.250 | 176 | 92 | 7 | 338 | 512 | 464 | 611 | 1.74e-11 | 67.8 |
MS.gene047480.t1 | AT4G12020 | 31.250 | 176 | 92 | 7 | 338 | 512 | 464 | 611 | 1.74e-11 | 67.8 |
MS.gene047480.t1 | AT2G40740 | 37.624 | 101 | 57 | 3 | 303 | 397 | 130 | 230 | 1.90e-11 | 65.5 |
MS.gene047480.t1 | AT4G12020 | 31.250 | 176 | 92 | 7 | 338 | 512 | 464 | 611 | 2.02e-11 | 67.8 |
MS.gene047480.t1 | AT4G12020 | 31.250 | 176 | 92 | 7 | 338 | 512 | 464 | 611 | 2.44e-11 | 67.4 |
MS.gene047480.t1 | AT4G12020 | 31.250 | 176 | 92 | 7 | 338 | 512 | 464 | 611 | 2.46e-11 | 67.4 |
MS.gene047480.t1 | AT4G12020 | 31.250 | 176 | 92 | 7 | 338 | 512 | 464 | 611 | 2.46e-11 | 67.4 |
MS.gene047480.t1 | AT4G12020 | 31.250 | 176 | 92 | 7 | 338 | 512 | 464 | 611 | 2.46e-11 | 67.4 |
MS.gene047480.t1 | AT4G12020 | 31.250 | 176 | 92 | 7 | 338 | 512 | 464 | 611 | 2.57e-11 | 67.4 |
MS.gene047480.t1 | AT2G46130 | 37.500 | 80 | 49 | 1 | 320 | 399 | 8 | 86 | 2.68e-11 | 61.2 |
MS.gene047480.t1 | AT4G12020 | 31.250 | 176 | 92 | 7 | 338 | 512 | 464 | 611 | 2.82e-11 | 67.4 |
MS.gene047480.t1 | AT2G40740 | 37.624 | 101 | 57 | 3 | 303 | 397 | 139 | 239 | 2.96e-11 | 65.1 |
MS.gene047480.t1 | AT4G12020 | 45.714 | 70 | 36 | 2 | 338 | 407 | 464 | 531 | 9.77e-11 | 65.5 |
Find 150 sgRNAs with CRISPR-Local
Find 182 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCTACAAACATCACAAATTT+AGG | 0.187343 | 2.4:-63212860 | MS.gene047480:CDS |
GTTGGTGGTGCTGGTGGTGG+TGG | 0.202175 | 2.4:+63214234 | None:intergenic |
CTCTCTAATAGTTCCATTTC+CGG | 0.214380 | 2.4:+63212752 | None:intergenic |
AAATTTAGGTTCGCCTAATA+TGG | 0.245558 | 2.4:-63212846 | MS.gene047480:CDS |
GGTTGTGGTGGCAGTGATAA+TGG | 0.263983 | 2.4:+63214093 | None:intergenic |
ATGAGTCCAGTTTCAGAATA+AGG | 0.269380 | 2.4:+63212596 | None:intergenic |
GGTGGGGATGGTGGTGGTCA+AGG | 0.277140 | 2.4:+63214198 | None:intergenic |
GGTGGTGCTGGTGGTGGTGG+GGG | 0.282046 | 2.4:+63214237 | None:intergenic |
ATCTGTAACATCACCATATT+AGG | 0.294748 | 2.4:+63212833 | None:intergenic |
TGGTGGTGCTGGTGGTGGTG+GGG | 0.299381 | 2.4:+63214236 | None:intergenic |
GGTGATGTGGGTGGGGATGG+TGG | 0.303024 | 2.4:+63214189 | None:intergenic |
TCAATGCATGCAACAGGTTT+AGG | 0.303961 | 2.4:+63213905 | None:intergenic |
TCGTGGGCGTGGAGGAAATA+TGG | 0.318270 | 2.4:-63213397 | MS.gene047480:CDS |
GAGTATTGGAAAATTATATT+TGG | 0.320543 | 2.4:+63213748 | None:intergenic |
TATAATTTCCGAATACTTGC+TGG | 0.320932 | 2.4:-63213971 | MS.gene047480:CDS |
TGGGGATGGTGGTGGTCAAG+GGG | 0.326902 | 2.4:+63214200 | None:intergenic |
TGATAGGGGTAGTGGTGGTC+GGG | 0.328659 | 2.4:+63214059 | None:intergenic |
GTTGTGGTGGCAGTGATAAT+GGG | 0.330481 | 2.4:+63214094 | None:intergenic |
ATGAAGTCATTTGGTTTAAG+TGG | 0.330576 | 2.4:+63214349 | None:intergenic |
TACTAGTGGTAGCTGGGGTT+GGG | 0.331153 | 2.4:+63214290 | None:intergenic |
TTGGTGGTGCTGGTGGTGGT+GGG | 0.333587 | 2.4:+63214235 | None:intergenic |
GTGGGGATGGTGGTGGTCAA+GGG | 0.334475 | 2.4:+63214199 | None:intergenic |
ATAGTTCCATTTCCGGATAA+AGG | 0.337415 | 2.4:+63212759 | None:intergenic |
ATCAATGCATGCAACAGGTT+TGG | 0.338091 | 2.4:+63213676 | None:intergenic |
TGAGATAGTGTTGGTGGTGC+TGG | 0.338766 | 2.4:+63214225 | None:intergenic |
CACTATGCAGATCGAGAAAA+AGG | 0.340622 | 2.4:-63213607 | MS.gene047480:intron |
AAGTATTCGGAAATTATAAT+TGG | 0.345263 | 2.4:+63213976 | None:intergenic |
CAGTCTCTGGTGACTTGCGC+TGG | 0.347837 | 2.4:+63212912 | None:intergenic |
GGGGATGGTGGTGGTCAAGG+GGG | 0.349141 | 2.4:+63214201 | None:intergenic |
TGATTGGGGTAGTGGTGGTC+GGG | 0.349837 | 2.4:+63213831 | None:intergenic |
AACCTCCCTTATTCTGAAAC+TGG | 0.353308 | 2.4:-63212602 | MS.gene047480:CDS |
TCAATGCATGCAACAGGTTT+GGG | 0.360204 | 2.4:+63213677 | None:intergenic |
GATGTGGGTGGGGATGGTGG+TGG | 0.361535 | 2.4:+63214192 | None:intergenic |
TCTAGATCTATGAAGTCATT+TGG | 0.366608 | 2.4:+63214340 | None:intergenic |
ATAATTGGTGGGATATTGAT+TGG | 0.368833 | 2.4:+63213991 | None:intergenic |
TATTCTGAAACTGGACTCAT+TGG | 0.369961 | 2.4:-63212593 | MS.gene047480:CDS |
TTGAGGGAATGTGATGTTAT+TGG | 0.370353 | 2.4:+63214438 | None:intergenic |
ATATTTGGTGAGATATTGAT+TGG | 0.376688 | 2.4:+63213763 | None:intergenic |
GTTGGTGATGTGGGTGGGGA+TGG | 0.376997 | 2.4:+63214186 | None:intergenic |
TCTGACCAAGCTGTTATGTT+TGG | 0.377584 | 2.4:+63212539 | None:intergenic |
TTGGTCAGAAGATTATTTAA+TGG | 0.378102 | 2.4:-63212525 | MS.gene047480:CDS |
GTTGTTGTCCAGCAAGTATT+CGG | 0.385639 | 2.4:+63213963 | None:intergenic |
TGCTCGTAGCAGATATGATT+GGG | 0.388493 | 2.4:+63213816 | None:intergenic |
ATACTAGTGGTAGCTGGGGT+TGG | 0.393487 | 2.4:+63214289 | None:intergenic |
GTGATAGGGGTAGTGGTGGT+CGG | 0.394478 | 2.4:+63214058 | None:intergenic |
GTGGTGGTGGTATTGAATTT+TGG | 0.397057 | 2.4:+63214265 | None:intergenic |
CCACAAAGTAGGAATGTTAC+AGG | 0.397474 | 2.4:-63212641 | MS.gene047480:CDS |
TTGGTAGTGGTTTCGATTTG+AGG | 0.403044 | 2.4:+63214457 | None:intergenic |
TAATGTTGGTGATGTGGGTG+GGG | 0.404886 | 2.4:+63214182 | None:intergenic |
TTGATTGATCAGCGAGAACC+TGG | 0.406949 | 2.4:+63212786 | None:intergenic |
TTTAATAAGAATGTTGTTGT+TGG | 0.409716 | 2.4:-63212941 | MS.gene047480:CDS |
CAAAATGGTGTGACACTTTG+AGG | 0.411481 | 2.4:+63214421 | None:intergenic |
TTAATGTTGGTGATGTGGGT+GGG | 0.412823 | 2.4:+63214181 | None:intergenic |
GTGCTCGCAACAGATGTGAT+AGG | 0.414305 | 2.4:+63214043 | None:intergenic |
AGTGTTGGTGGTGCTGGTGG+TGG | 0.418934 | 2.4:+63214231 | None:intergenic |
CCTGTAACATTCCTACTTTG+TGG | 0.419186 | 2.4:+63212641 | None:intergenic |
AGTGGTAGCTGGGGTTGGGA+TGG | 0.428496 | 2.4:+63214294 | None:intergenic |
GTGATATCAATGCATGCAAC+AGG | 0.433021 | 2.4:+63213671 | None:intergenic |
GGAATGTTACAGGTGTTGTC+GGG | 0.434516 | 2.4:-63212631 | MS.gene047480:CDS |
ATGATTGGGGTAGTGGTGGT+CGG | 0.440238 | 2.4:+63213830 | None:intergenic |
ACAACATTCTTATTAAATGT+TGG | 0.443200 | 2.4:+63212947 | None:intergenic |
GTGGTAGCTGGGGTTGGGAT+GGG | 0.443309 | 2.4:+63214295 | None:intergenic |
TTGTGGTGGCAGTGATAATG+GGG | 0.443656 | 2.4:+63214095 | None:intergenic |
GTGCTCGTAGCAGATATGAT+TGG | 0.445306 | 2.4:+63213815 | None:intergenic |
TTAAGTGGGGCAAAAGAGAC+TGG | 0.447663 | 2.4:+63214364 | None:intergenic |
TGAGTCCAGTTTCAGAATAA+GGG | 0.453523 | 2.4:+63212597 | None:intergenic |
GTAGGATTATCAGAGCAAAA+TGG | 0.453647 | 2.4:+63214406 | None:intergenic |
GATCCAACTTCTTCGACAAC+AGG | 0.455140 | 2.4:+63212722 | None:intergenic |
TATAACACATCAATGCCATT+TGG | 0.456145 | 2.4:+63213446 | None:intergenic |
CAGCGCAAGTCACCAGAGAC+TGG | 0.456474 | 2.4:-63212911 | MS.gene047480:CDS |
GAATGTGATGTTATTGGTAG+TGG | 0.458828 | 2.4:+63214444 | None:intergenic |
GTGATATCAATGCATGCAAC+AGG | 0.463584 | 2.4:+63213899 | None:intergenic |
GGGAGTGGTGGGAGTAGTGA+TGG | 0.464500 | 2.4:+63214129 | None:intergenic |
TGTTGTTGTCCAGCGAGTAT+TGG | 0.468656 | 2.4:+63213734 | None:intergenic |
GTTAATGTTGGTGATGTGGG+TGG | 0.469111 | 2.4:+63214180 | None:intergenic |
ACCTGGGCATTGCTGCTCTC+CGG | 0.469412 | 2.4:+63212803 | None:intergenic |
AGCAGATATGATTGGGGTAG+TGG | 0.472211 | 2.4:+63213823 | None:intergenic |
TTACCTGTTGTCGAAGAAGT+TGG | 0.474676 | 2.4:-63212725 | MS.gene047480:CDS |
CGGGGTGATTATAGTGGTTG+TGG | 0.477731 | 2.4:+63214078 | None:intergenic |
GGTAATGGTAGAGGGAGTGG+TGG | 0.480162 | 2.4:+63214117 | None:intergenic |
TGAAGTCATTTGGTTTAAGT+GGG | 0.485609 | 2.4:+63214350 | None:intergenic |
GTTTCGATTTGAGGTGGCGG+TGG | 0.486220 | 2.4:+63214466 | None:intergenic |
TTGGCATACTAGTGGTAGCT+GGG | 0.487890 | 2.4:+63214284 | None:intergenic |
GATGTTACAGATTGATCATC+CGG | 0.490780 | 2.4:-63212822 | MS.gene047480:CDS |
TTACACTCTGCAGAAGAAGC+TGG | 0.498625 | 2.4:-63212887 | MS.gene047480:CDS |
ATGGACTTCAACCGCCTCAA+TGG | 0.499646 | 2.4:-63212506 | MS.gene047480:CDS |
TGCTCGCAACAGATGTGATA+GGG | 0.504965 | 2.4:+63214044 | None:intergenic |
TATTCGGAAATTATAATTGG+TGG | 0.506758 | 2.4:+63213979 | None:intergenic |
AGGAATGTTACAGGTGTTGT+CGG | 0.507063 | 2.4:-63212632 | MS.gene047480:CDS |
TGGCATTGATGTGTTATATG+AGG | 0.512049 | 2.4:-63213441 | MS.gene047480:CDS |
GCAGAGTGTAATCCAGTCTC+TGG | 0.513748 | 2.4:+63212899 | None:intergenic |
AGTGGTGGGAGTAGTGATGG+TGG | 0.515197 | 2.4:+63214132 | None:intergenic |
TTTGGCATACTAGTGGTAGC+TGG | 0.515752 | 2.4:+63214283 | None:intergenic |
TAGAAAACATAATAACCAAA+TGG | 0.516057 | 2.4:-63213461 | MS.gene047480:CDS |
AGTCTCTGGTGACTTGCGCT+GGG | 0.516218 | 2.4:+63212913 | None:intergenic |
GTGGTGGGAGTAGTGATGGT+GGG | 0.519264 | 2.4:+63214133 | None:intergenic |
ACTTATATTGTAACATATGA+AGG | 0.520110 | 2.4:-63212989 | MS.gene047480:CDS |
GAGTAGTGATGGTGGGAGTG+TGG | 0.520200 | 2.4:+63214140 | None:intergenic |
GATTGGGGTAGTGGTGGTCG+GGG | 0.520285 | 2.4:+63213832 | None:intergenic |
GGTGTTAATGTTGGTGATGT+GGG | 0.527208 | 2.4:+63214177 | None:intergenic |
AACAGATGTGATAGGGGTAG+TGG | 0.528816 | 2.4:+63214051 | None:intergenic |
TCCGGAGAGCAGCAATGCCC+AGG | 0.531466 | 2.4:-63212804 | MS.gene047480:CDS |
GGTGGTAGGAGTAGTAAAAG+TGG | 0.531469 | 2.4:+63214501 | None:intergenic |
TGGTGTTAATGTTGGTGATG+TGG | 0.531937 | 2.4:+63214176 | None:intergenic |
ATTCGGAAATTATAATTGGT+GGG | 0.535054 | 2.4:+63213980 | None:intergenic |
GATAGGGGTAGTGGTGGTCG+GGG | 0.546614 | 2.4:+63214060 | None:intergenic |
GGTGGTCGGGGTGATTATAG+TGG | 0.549679 | 2.4:+63214072 | None:intergenic |
AAAATGGTGTGACACTTTGA+GGG | 0.550963 | 2.4:+63214422 | None:intergenic |
TTTCAAAAGACTCGTGGGCG+TGG | 0.554710 | 2.4:-63213408 | MS.gene047480:CDS |
GTAATGGTAGAGGGAGTGGT+GGG | 0.555015 | 2.4:+63214118 | None:intergenic |
TGATACCAAACATAACAGCT+TGG | 0.570214 | 2.4:-63212544 | MS.gene047480:CDS |
TTAAAGGGTCTCCACATCCA+AGG | 0.571232 | 2.4:-63213363 | MS.gene047480:intron |
TGATTGTCCAGCAAGAAGAA+AGG | 0.574441 | 2.4:-63213038 | MS.gene047480:CDS |
TCGGGGTGATAGCTGATGGA+TGG | 0.591717 | 2.4:+63213849 | None:intergenic |
GATAGTGTTGGTGGTGCTGG+TGG | 0.594465 | 2.4:+63214228 | None:intergenic |
GTGGTTTCGATTTGAGGTGG+CGG | 0.594576 | 2.4:+63214463 | None:intergenic |
GACTTCAACCGCCTCAATGG+TGG | 0.595091 | 2.4:-63212503 | MS.gene047480:CDS |
GTAGTGGTTTCGATTTGAGG+TGG | 0.597682 | 2.4:+63214460 | None:intergenic |
GGAATATAGCACCACCATTG+AGG | 0.603269 | 2.4:+63212492 | None:intergenic |
AATTTGATGAACCACAAAGT+AGG | 0.604187 | 2.4:-63212652 | MS.gene047480:CDS |
ATGAACACTAGTCTTTGTCA+TGG | 0.605141 | 2.4:+63213790 | None:intergenic |
TGGCATACTAGTGGTAGCTG+GGG | 0.606085 | 2.4:+63214285 | None:intergenic |
ATGAACACTGGTGTTAATGT+TGG | 0.608499 | 2.4:+63214168 | None:intergenic |
GGCATTGATGTGTTATATGA+GGG | 0.611463 | 2.4:-63213440 | MS.gene047480:CDS |
GTGGTCGGGGTGATAGCTGA+TGG | 0.611835 | 2.4:+63213845 | None:intergenic |
ATGAACACTAGTGTTTGTCA+TGG | 0.612356 | 2.4:+63214018 | None:intergenic |
GTCCAGTTTCAGAATAAGGG+AGG | 0.616537 | 2.4:+63212600 | None:intergenic |
GAAGTCATTTGGTTTAAGTG+GGG | 0.620194 | 2.4:+63214351 | None:intergenic |
ATATGTGTAAACCTTGGATG+TGG | 0.620653 | 2.4:+63213352 | None:intergenic |
GCTATTACAAATGTAGCACT+TGG | 0.620926 | 2.4:-63213063 | MS.gene047480:CDS |
TGCATAGTGCAACTGATGGA+TGG | 0.623878 | 2.4:+63213621 | None:intergenic |
CAAAAGACTCGTGGGCGTGG+AGG | 0.623998 | 2.4:-63213405 | MS.gene047480:CDS |
CTCTGGTGACTTGCGCTGGG+AGG | 0.626715 | 2.4:+63212916 | None:intergenic |
TGAGCTTTCAAAAGACTCGT+GGG | 0.628685 | 2.4:-63213413 | MS.gene047480:CDS |
ATTGATGTGTTATATGAGGG+AGG | 0.631085 | 2.4:-63213437 | MS.gene047480:CDS |
GATCTGCATAGTGCAACTGA+TGG | 0.634706 | 2.4:+63213617 | None:intergenic |
GAATGTTACAGGTGTTGTCG+GGG | 0.638149 | 2.4:-63212630 | MS.gene047480:CDS |
ATGAGCTTTCAAAAGACTCG+TGG | 0.638619 | 2.4:-63213414 | MS.gene047480:CDS |
GCATGCACGTTCAAAATGAG+CGG | 0.640778 | 2.4:+63213646 | None:intergenic |
AGATGTGATAGGGGTAGTGG+TGG | 0.641506 | 2.4:+63214054 | None:intergenic |
AGATATGATTGGGGTAGTGG+TGG | 0.642708 | 2.4:+63213826 | None:intergenic |
TGATTGATCAGCGAGAACCT+GGG | 0.643075 | 2.4:+63212787 | None:intergenic |
GGTGATTATAGTGGTTGTGG+TGG | 0.648806 | 2.4:+63214081 | None:intergenic |
GCTCGCAACAGATGTGATAG+GGG | 0.666943 | 2.4:+63214045 | None:intergenic |
GTATGCACATTCAAAATGAG+TGG | 0.673260 | 2.4:+63213874 | None:intergenic |
TATGCACATTCAAAATGAGT+GGG | 0.679056 | 2.4:+63213875 | None:intergenic |
ATATAGCACCACCATTGAGG+CGG | 0.679111 | 2.4:+63212495 | None:intergenic |
TGTGGTGGCAGTGATAATGG+GGG | 0.691274 | 2.4:+63214096 | None:intergenic |
GCTCGTAGCAGATATGATTG+GGG | 0.709067 | 2.4:+63213817 | None:intergenic |
AGTGTGGATAACATGAACAC+TGG | 0.712481 | 2.4:+63214156 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTTTGAAAACATCAAAAAT+TGG | - | chr2.4:63213899-63213918 | MS.gene047480:CDS | 15.0% |
!! | AAGTATTCGGAAATTATAAT+TGG | + | chr2.4:63213067-63213086 | None:intergenic | 20.0% |
!! | ACAACATTCTTATTAAATGT+TGG | + | chr2.4:63214096-63214115 | None:intergenic | 20.0% |
!! | ACTTATATTGTAACATATGA+AGG | - | chr2.4:63214051-63214070 | MS.gene047480:CDS | 20.0% |
!! | ATTTCTTTCAACATCATTTA+TGG | + | chr2.4:63213937-63213956 | None:intergenic | 20.0% |
!! | TAGAAAACATAATAACCAAA+TGG | - | chr2.4:63213579-63213598 | MS.gene047480:intron | 20.0% |
!! | TTTAATAAGAATGTTGTTGT+TGG | - | chr2.4:63214099-63214118 | MS.gene047480:CDS | 20.0% |
!!! | ATCATCAAATTTTAGAAACT+TGG | - | chr2.4:63214341-63214360 | MS.gene047480:CDS | 20.0% |
!!! | GAGTATTGGAAAATTATATT+TGG | + | chr2.4:63213295-63213314 | None:intergenic | 20.0% |
!!! | TCATCAAATTTTAGAAACTT+GGG | - | chr2.4:63214342-63214361 | MS.gene047480:CDS | 20.0% |
!!! | TGTTTTCTATAAGAAAAGAA+AGG | + | chr2.4:63213568-63213587 | None:intergenic | 20.0% |
! | AAATCAATAAATGATGTTGC+AGG | - | chr2.4:63213953-63213972 | MS.gene047480:CDS | 25.0% |
! | AACACATCTTATCTTAATCA+TGG | - | chr2.4:63213860-63213879 | MS.gene047480:CDS | 25.0% |
! | ATGGACAAAAAGCTATTAAA+GGG | - | chr2.4:63213662-63213681 | MS.gene047480:CDS | 25.0% |
! | ATTCGGAAATTATAATTGGT+GGG | + | chr2.4:63213063-63213082 | None:intergenic | 25.0% |
! | TACTATTATATGCACTAACA+AGG | + | chr2.4:63213831-63213850 | None:intergenic | 25.0% |
! | TATGGACAAAAAGCTATTAA+AGG | - | chr2.4:63213661-63213680 | MS.gene047480:CDS | 25.0% |
! | TATTCGGAAATTATAATTGG+TGG | + | chr2.4:63213064-63213083 | None:intergenic | 25.0% |
! | TCAATCAAAAATCCTTTATC+CGG | - | chr2.4:63214269-63214288 | MS.gene047480:CDS | 25.0% |
! | TCTACAAACATCACAAATTT+AGG | - | chr2.4:63214180-63214199 | MS.gene047480:CDS | 25.0% |
! | TTGGTCAGAAGATTATTTAA+TGG | - | chr2.4:63214515-63214534 | MS.gene047480:CDS | 25.0% |
! | TTGTTACATAAAACAAACAC+TGG | - | chr2.4:63213766-63213785 | MS.gene047480:CDS | 25.0% |
!! | ATATTTGGTGAGATATTGAT+TGG | + | chr2.4:63213280-63213299 | None:intergenic | 25.0% |
!! | CTATTTTCTTGGTTAAAAGT+AGG | + | chr2.4:63212655-63212674 | None:intergenic | 25.0% |
!! | TTTTGAATATGTGTAAACCT+TGG | + | chr2.4:63213697-63213716 | None:intergenic | 25.0% |
AAAAATCCTTTATCCGGAAA+TGG | - | chr2.4:63214275-63214294 | MS.gene047480:CDS | 30.0% | |
AATTTGATGAACCACAAAGT+AGG | - | chr2.4:63214388-63214407 | MS.gene047480:CDS | 30.0% | |
ATAATTGGTGGGATATTGAT+TGG | + | chr2.4:63213052-63213071 | None:intergenic | 30.0% | |
ATCTGTAACATCACCATATT+AGG | + | chr2.4:63214210-63214229 | None:intergenic | 30.0% | |
GGATTTATAAAAATGGTGGT+AGG | + | chr2.4:63212556-63212575 | None:intergenic | 30.0% | |
TATAACACATCAATGCCATT+TGG | + | chr2.4:63213597-63213616 | None:intergenic | 30.0% | |
TATAATTTCCGAATACTTGC+TGG | - | chr2.4:63213069-63213088 | MS.gene047480:intron | 30.0% | |
TATGCACATTCAAAATGAGT+GGG | + | chr2.4:63213168-63213187 | None:intergenic | 30.0% | |
TCTAGATCTATGAAGTCATT+TGG | + | chr2.4:63212703-63212722 | None:intergenic | 30.0% | |
! | AAATTTAGGTTCGCCTAATA+TGG | - | chr2.4:63214194-63214213 | MS.gene047480:CDS | 30.0% |
! | ATGAAGTCATTTGGTTTAAG+TGG | + | chr2.4:63212694-63212713 | None:intergenic | 30.0% |
! | TATAATTTTCCAATACTCGC+TGG | - | chr2.4:63213297-63213316 | MS.gene047480:intron | 30.0% |
! | TGAAGTCATTTGGTTTAAGT+GGG | + | chr2.4:63212693-63212712 | None:intergenic | 30.0% |
!! | ATTGAATTTTGGCATACTAG+TGG | + | chr2.4:63212767-63212786 | None:intergenic | 30.0% |
!!! | AATCACCTTTTAAAACACGA+CGG | + | chr2.4:63213794-63213813 | None:intergenic | 30.0% |
AAAATGGTGTGACACTTTGA+GGG | + | chr2.4:63212621-63212640 | None:intergenic | 35.0% | |
ATAGTTCCATTTCCGGATAA+AGG | + | chr2.4:63214284-63214303 | None:intergenic | 35.0% | |
ATATGTGTAAACCTTGGATG+TGG | + | chr2.4:63213691-63213710 | None:intergenic | 35.0% | |
ATGAACACTAGTGTTTGTCA+TGG | + | chr2.4:63213025-63213044 | None:intergenic | 35.0% | |
ATGAGTCCAGTTTCAGAATA+AGG | + | chr2.4:63214447-63214466 | None:intergenic | 35.0% | |
ATTGATGTGTTATATGAGGG+AGG | - | chr2.4:63213603-63213622 | MS.gene047480:intron | 35.0% | |
CTCTCTAATAGTTCCATTTC+CGG | + | chr2.4:63214291-63214310 | None:intergenic | 35.0% | |
GAATGTGATGTTATTGGTAG+TGG | + | chr2.4:63212599-63212618 | None:intergenic | 35.0% | |
GATGTTACAGATTGATCATC+CGG | - | chr2.4:63214218-63214237 | MS.gene047480:CDS | 35.0% | |
GCTATTACAAATGTAGCACT+TGG | - | chr2.4:63213977-63213996 | MS.gene047480:CDS | 35.0% | |
GTAGGATTATCAGAGCAAAA+TGG | + | chr2.4:63212637-63212656 | None:intergenic | 35.0% | |
GTATGCACATTCAAAATGAG+TGG | + | chr2.4:63213169-63213188 | None:intergenic | 35.0% | |
TGAGTCCAGTTTCAGAATAA+GGG | + | chr2.4:63214446-63214465 | None:intergenic | 35.0% | |
TGATACCAAACATAACAGCT+TGG | - | chr2.4:63214496-63214515 | MS.gene047480:CDS | 35.0% | |
TTGAGGGAATGTGATGTTAT+TGG | + | chr2.4:63212605-63212624 | None:intergenic | 35.0% | |
! | AAGAGACTGGACTATTTTCT+TGG | + | chr2.4:63212666-63212685 | None:intergenic | 35.0% |
! | ATGAACACTGGTGTTAATGT+TGG | + | chr2.4:63212875-63212894 | None:intergenic | 35.0% |
! | CGGTGGATTTATAAAAATGG+TGG | + | chr2.4:63212560-63212579 | None:intergenic | 35.0% |
! | GAAGTCATTTGGTTTAAGTG+GGG | + | chr2.4:63212692-63212711 | None:intergenic | 35.0% |
! | TGGCGGTGGATTTATAAAAA+TGG | + | chr2.4:63212563-63212582 | None:intergenic | 35.0% |
! | TTTTCAACCTTTCTTCTTGC+TGG | + | chr2.4:63214012-63214031 | None:intergenic | 35.0% |
!! | ATGAACACTAGTCTTTGTCA+TGG | + | chr2.4:63213253-63213272 | None:intergenic | 35.0% |
!! | GGCATTGATGTGTTATATGA+GGG | - | chr2.4:63213600-63213619 | MS.gene047480:intron | 35.0% |
!! | TATTCTGAAACTGGACTCAT+TGG | - | chr2.4:63214447-63214466 | MS.gene047480:CDS | 35.0% |
!! | TGGCATTGATGTGTTATATG+AGG | - | chr2.4:63213599-63213618 | MS.gene047480:intron | 35.0% |
AGTGTGGATAACATGAACAC+TGG | + | chr2.4:63212887-63212906 | None:intergenic | 40.0% | |
ATCAATGCATGCAACAGGTT+TGG | + | chr2.4:63213139-63213158 | None:intergenic | 40.0% | |
ATGAGCTTTCAAAAGACTCG+TGG | - | chr2.4:63213626-63213645 | MS.gene047480:CDS | 40.0% | |
CAAAATGGTGTGACACTTTG+AGG | + | chr2.4:63212622-63212641 | None:intergenic | 40.0% | |
CACTATGCAGATCGAGAAAA+AGG | - | chr2.4:63213433-63213452 | MS.gene047480:CDS | 40.0% | |
CCACAAAGTAGGAATGTTAC+AGG | - | chr2.4:63214399-63214418 | MS.gene047480:CDS | 40.0% | |
CCTGTAACATTCCTACTTTG+TGG | + | chr2.4:63214402-63214421 | None:intergenic | 40.0% | |
GTGATATCAATGCATGCAAC+AGG | + | chr2.4:63213144-63213163 | None:intergenic | 40.0% | |
GTTGTTGTCCAGCAAGTATT+CGG | + | chr2.4:63213080-63213099 | None:intergenic | 40.0% | |
TCAATGCATGCAACAGGTTT+AGG | + | chr2.4:63213138-63213157 | None:intergenic | 40.0% | |
TCAATGCATGCAACAGGTTT+GGG | + | chr2.4:63213138-63213157 | None:intergenic | 40.0% | |
TCTGACCAAGCTGTTATGTT+TGG | + | chr2.4:63214504-63214523 | None:intergenic | 40.0% | |
TGAGCTTTCAAAAGACTCGT+GGG | - | chr2.4:63213627-63213646 | MS.gene047480:CDS | 40.0% | |
TGATTGTCCAGCAAGAAGAA+AGG | - | chr2.4:63214002-63214021 | MS.gene047480:CDS | 40.0% | |
TGCTCGTAGCAGATATGATT+GGG | + | chr2.4:63213227-63213246 | None:intergenic | 40.0% | |
TTACCTGTTGTCGAAGAAGT+TGG | - | chr2.4:63214315-63214334 | MS.gene047480:CDS | 40.0% | |
! | AGGAATGTTACAGGTGTTGT+CGG | - | chr2.4:63214408-63214427 | MS.gene047480:CDS | 40.0% |
! | ATAATGGGGGTAATGGTAGA+GGG | + | chr2.4:63212934-63212953 | None:intergenic | 40.0% |
!! | AACCTCCCTTATTCTGAAAC+TGG | - | chr2.4:63214438-63214457 | MS.gene047480:CDS | 40.0% |
!! | GGTGTTAATGTTGGTGATGT+GGG | + | chr2.4:63212866-63212885 | None:intergenic | 40.0% |
!! | TGGTGTTAATGTTGGTGATG+TGG | + | chr2.4:63212867-63212886 | None:intergenic | 40.0% |
!! | TTAATGTTGGTGATGTGGGT+GGG | + | chr2.4:63212862-63212881 | None:intergenic | 40.0% |
!! | TTGGTAGTGGTTTCGATTTG+AGG | + | chr2.4:63212586-63212605 | None:intergenic | 40.0% |
!!! | GTGGTGGTGGTATTGAATTT+TGG | + | chr2.4:63212778-63212797 | None:intergenic | 40.0% |
AACAGATGTGATAGGGGTAG+TGG | + | chr2.4:63212992-63213011 | None:intergenic | 45.0% | |
AGCAGATATGATTGGGGTAG+TGG | + | chr2.4:63213220-63213239 | None:intergenic | 45.0% | |
ATATAGCACCACCATTGAGG+CGG | + | chr2.4:63214548-63214567 | None:intergenic | 45.0% | |
GATCCAACTTCTTCGACAAC+AGG | + | chr2.4:63214321-63214340 | None:intergenic | 45.0% | |
GATCTGCATAGTGCAACTGA+TGG | + | chr2.4:63213426-63213445 | None:intergenic | 45.0% | |
GCATGCACGTTCAAAATGAG+CGG | + | chr2.4:63213397-63213416 | None:intergenic | 45.0% | |
GCTCGTAGCAGATATGATTG+GGG | + | chr2.4:63213226-63213245 | None:intergenic | 45.0% | |
GGAATATAGCACCACCATTG+AGG | + | chr2.4:63214551-63214570 | None:intergenic | 45.0% | |
GGTGATTATAGTGGTTGTGG+TGG | + | chr2.4:63212962-63212981 | None:intergenic | 45.0% | |
GGTGGTAGGAGTAGTAAAAG+TGG | + | chr2.4:63212542-63212561 | None:intergenic | 45.0% | |
GTCCAGTTTCAGAATAAGGG+AGG | + | chr2.4:63214443-63214462 | None:intergenic | 45.0% | |
GTGCTCGTAGCAGATATGAT+TGG | + | chr2.4:63213228-63213247 | None:intergenic | 45.0% | |
GTTGTGGTGGCAGTGATAAT+GGG | + | chr2.4:63212949-63212968 | None:intergenic | 45.0% | |
TGATTGATCAGCGAGAACCT+GGG | + | chr2.4:63214256-63214275 | None:intergenic | 45.0% | |
TGCATAGTGCAACTGATGGA+TGG | + | chr2.4:63213422-63213441 | None:intergenic | 45.0% | |
TGCTCGCAACAGATGTGATA+GGG | + | chr2.4:63212999-63213018 | None:intergenic | 45.0% | |
TGTTGTTGTCCAGCGAGTAT+TGG | + | chr2.4:63213309-63213328 | None:intergenic | 45.0% | |
TTAAAGGGTCTCCACATCCA+AGG | - | chr2.4:63213677-63213696 | MS.gene047480:CDS | 45.0% | |
TTAAGTGGGGCAAAAGAGAC+TGG | + | chr2.4:63212679-63212698 | None:intergenic | 45.0% | |
TTACACTCTGCAGAAGAAGC+TGG | - | chr2.4:63214153-63214172 | MS.gene047480:CDS | 45.0% | |
TTGATTGATCAGCGAGAACC+TGG | + | chr2.4:63214257-63214276 | None:intergenic | 45.0% | |
TTGGCATACTAGTGGTAGCT+GGG | + | chr2.4:63212759-63212778 | None:intergenic | 45.0% | |
TTTGGCATACTAGTGGTAGC+TGG | + | chr2.4:63212760-63212779 | None:intergenic | 45.0% | |
! | AGATATGATTGGGGTAGTGG+TGG | + | chr2.4:63213217-63213236 | None:intergenic | 45.0% |
! | GAATGTTACAGGTGTTGTCG+GGG | - | chr2.4:63214410-63214429 | MS.gene047480:CDS | 45.0% |
! | GGAATGTTACAGGTGTTGTC+GGG | - | chr2.4:63214409-63214428 | MS.gene047480:CDS | 45.0% |
! | GTAGTGGTTTCGATTTGAGG+TGG | + | chr2.4:63212583-63212602 | None:intergenic | 45.0% |
! | TTGTGGTGGCAGTGATAATG+GGG | + | chr2.4:63212948-63212967 | None:intergenic | 45.0% |
!! | GATAATGGGGGTAATGGTAG+AGG | + | chr2.4:63212935-63212954 | None:intergenic | 45.0% |
!! | GTTAATGTTGGTGATGTGGG+TGG | + | chr2.4:63212863-63212882 | None:intergenic | 45.0% |
!! | TAATGTTGGTGATGTGGGTG+GGG | + | chr2.4:63212861-63212880 | None:intergenic | 45.0% |
!! | TGGCACCGTCGTGTTTTAAA+AGG | - | chr2.4:63213786-63213805 | MS.gene047480:CDS | 45.0% |
ATACTAGTGGTAGCTGGGGT+TGG | + | chr2.4:63212754-63212773 | None:intergenic | 50.0% | |
ATGGACTTCAACCGCCTCAA+TGG | - | chr2.4:63214534-63214553 | MS.gene047480:CDS | 50.0% | |
CAAGGGGGATGAGATAGTGT+TGG | + | chr2.4:63212827-63212846 | None:intergenic | 50.0% | |
CGGGGTGATTATAGTGGTTG+TGG | + | chr2.4:63212965-63212984 | None:intergenic | 50.0% | |
GCAGAGTGTAATCCAGTCTC+TGG | + | chr2.4:63214144-63214163 | None:intergenic | 50.0% | |
GCTCGCAACAGATGTGATAG+GGG | + | chr2.4:63212998-63213017 | None:intergenic | 50.0% | |
GGTTGTGGTGGCAGTGATAA+TGG | + | chr2.4:63212950-63212969 | None:intergenic | 50.0% | |
GTAATGGTAGAGGGAGTGGT+GGG | + | chr2.4:63212925-63212944 | None:intergenic | 50.0% | |
GTGCTCGCAACAGATGTGAT+AGG | + | chr2.4:63213000-63213019 | None:intergenic | 50.0% | |
TACTAGTGGTAGCTGGGGTT+GGG | + | chr2.4:63212753-63212772 | None:intergenic | 50.0% | |
TGGCATACTAGTGGTAGCTG+GGG | + | chr2.4:63212758-63212777 | None:intergenic | 50.0% | |
TTTCAAAAGACTCGTGGGCG+TGG | - | chr2.4:63213632-63213651 | MS.gene047480:CDS | 50.0% | |
! | AGATGTGATAGGGGTAGTGG+TGG | + | chr2.4:63212989-63213008 | None:intergenic | 50.0% |
! | ATGATTGGGGTAGTGGTGGT+CGG | + | chr2.4:63213213-63213232 | None:intergenic | 50.0% |
! | GTGGTTTCGATTTGAGGTGG+CGG | + | chr2.4:63212580-63212599 | None:intergenic | 50.0% |
!! | GGCAGTGATAATGGGGGTAA+TGG | + | chr2.4:63212941-63212960 | None:intergenic | 50.0% |
!! | TGAGATAGTGTTGGTGGTGC+TGG | + | chr2.4:63212818-63212837 | None:intergenic | 50.0% |
!! | TGTGGTGGCAGTGATAATGG+GGG | + | chr2.4:63212947-63212966 | None:intergenic | 50.0% |
GACTTCAACCGCCTCAATGG+TGG | - | chr2.4:63214537-63214556 | MS.gene047480:CDS | 55.0% | |
GGTGGTCGGGGTGATTATAG+TGG | + | chr2.4:63212971-63212990 | None:intergenic | 55.0% | |
TCGGGGTGATAGCTGATGGA+TGG | + | chr2.4:63213194-63213213 | None:intergenic | 55.0% | |
TCGTGGGCGTGGAGGAAATA+TGG | - | chr2.4:63213643-63213662 | MS.gene047480:CDS | 55.0% | |
! | AGTCTCTGGTGACTTGCGCT+GGG | + | chr2.4:63214130-63214149 | None:intergenic | 55.0% |
! | AGTGGTGGGAGTAGTGATGG+TGG | + | chr2.4:63212911-63212930 | None:intergenic | 55.0% |
! | GGGGGATGAGATAGTGTTGG+TGG | + | chr2.4:63212824-63212843 | None:intergenic | 55.0% |
! | GGTAATGGTAGAGGGAGTGG+TGG | + | chr2.4:63212926-63212945 | None:intergenic | 55.0% |
! | GTGATAGGGGTAGTGGTGGT+CGG | + | chr2.4:63212985-63213004 | None:intergenic | 55.0% |
! | GTGGTGGGAGTAGTGATGGT+GGG | + | chr2.4:63212910-63212929 | None:intergenic | 55.0% |
! | GTTTCGATTTGAGGTGGCGG+TGG | + | chr2.4:63212577-63212596 | None:intergenic | 55.0% |
! | TGATAGGGGTAGTGGTGGTC+GGG | + | chr2.4:63212984-63213003 | None:intergenic | 55.0% |
! | TGATTGGGGTAGTGGTGGTC+GGG | + | chr2.4:63213212-63213231 | None:intergenic | 55.0% |
!! | GAGTAGTGATGGTGGGAGTG+TGG | + | chr2.4:63212903-63212922 | None:intergenic | 55.0% |
!! | GATAGTGTTGGTGGTGCTGG+TGG | + | chr2.4:63212815-63212834 | None:intergenic | 55.0% |
AGTGGTAGCTGGGGTTGGGA+TGG | + | chr2.4:63212749-63212768 | None:intergenic | 60.0% | |
CAAAAGACTCGTGGGCGTGG+AGG | - | chr2.4:63213635-63213654 | MS.gene047480:CDS | 60.0% | |
CAGCGCAAGTCACCAGAGAC+TGG | - | chr2.4:63214129-63214148 | MS.gene047480:CDS | 60.0% | |
GTGGTAGCTGGGGTTGGGAT+GGG | + | chr2.4:63212748-63212767 | None:intergenic | 60.0% | |
GTGGTCGGGGTGATAGCTGA+TGG | + | chr2.4:63213198-63213217 | None:intergenic | 60.0% | |
! | ACCTGGGCATTGCTGCTCTC+CGG | + | chr2.4:63214240-63214259 | None:intergenic | 60.0% |
! | CAGTCTCTGGTGACTTGCGC+TGG | + | chr2.4:63214131-63214150 | None:intergenic | 60.0% |
! | GATAGGGGTAGTGGTGGTCG+GGG | + | chr2.4:63212983-63213002 | None:intergenic | 60.0% |
! | GATTGGGGTAGTGGTGGTCG+GGG | + | chr2.4:63213211-63213230 | None:intergenic | 60.0% |
! | GGGAGTGGTGGGAGTAGTGA+TGG | + | chr2.4:63212914-63212933 | None:intergenic | 60.0% |
! | GGGGGTAATGGTAGAGGGAG+TGG | + | chr2.4:63212929-63212948 | None:intergenic | 60.0% |
!! | AGTGTTGGTGGTGCTGGTGG+TGG | + | chr2.4:63212812-63212831 | None:intergenic | 60.0% |
!! | GTGGGGATGGTGGTGGTCAA+GGG | + | chr2.4:63212844-63212863 | None:intergenic | 60.0% |
!! | GTTGGTGATGTGGGTGGGGA+TGG | + | chr2.4:63212857-63212876 | None:intergenic | 60.0% |
!! | TGGGGATGGTGGTGGTCAAG+GGG | + | chr2.4:63212843-63212862 | None:intergenic | 60.0% |
!! | TTGGTGGTGCTGGTGGTGGT+GGG | + | chr2.4:63212808-63212827 | None:intergenic | 60.0% |
GGTGATGTGGGTGGGGATGG+TGG | + | chr2.4:63212854-63212873 | None:intergenic | 65.0% | |
GGTGGGGGAAGATGTGGTGG+TGG | + | chr2.4:63212791-63212810 | None:intergenic | 65.0% | |
TCCGGAGAGCAGCAATGCCC+AGG | - | chr2.4:63214236-63214255 | MS.gene047480:CDS | 65.0% | |
! | CTCTGGTGACTTGCGCTGGG+AGG | + | chr2.4:63214127-63214146 | None:intergenic | 65.0% |
! | GATGTGGGTGGGGATGGTGG+TGG | + | chr2.4:63212851-63212870 | None:intergenic | 65.0% |
!! | GGGGATGGTGGTGGTCAAGG+GGG | + | chr2.4:63212842-63212861 | None:intergenic | 65.0% |
!! | GGTGGGGATGGTGGTGGTCA+AGG | + | chr2.4:63212845-63212864 | None:intergenic | 65.0% |
!! | GGTGGTGGGGGAAGATGTGG+TGG | + | chr2.4:63212794-63212813 | None:intergenic | 65.0% |
!! | GGTGGTGGTGGGGGAAGATG+TGG | + | chr2.4:63212797-63212816 | None:intergenic | 65.0% |
!! | GTTGGTGGTGCTGGTGGTGG+TGG | + | chr2.4:63212809-63212828 | None:intergenic | 65.0% |
!! | TGGTGGTGCTGGTGGTGGTG+GGG | + | chr2.4:63212807-63212826 | None:intergenic | 65.0% |
!! | GGTGGTGCTGGTGGTGGTGG+GGG | + | chr2.4:63212806-63212825 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.4 | gene | 63212487 | 63214575 | 63212487 | ID=MS.gene047480 |
chr2.4 | mRNA | 63212487 | 63214575 | 63212487 | ID=MS.gene047480.t1;Parent=MS.gene047480 |
chr2.4 | exon | 63213608 | 63214575 | 63213608 | ID=MS.gene047480.t1.exon1;Parent=MS.gene047480.t1 |
chr2.4 | CDS | 63213608 | 63214575 | 63213608 | ID=cds.MS.gene047480.t1;Parent=MS.gene047480.t1 |
chr2.4 | exon | 63213364 | 63213480 | 63213364 | ID=MS.gene047480.t1.exon2;Parent=MS.gene047480.t1 |
chr2.4 | CDS | 63213364 | 63213480 | 63213364 | ID=cds.MS.gene047480.t1;Parent=MS.gene047480.t1 |
chr2.4 | exon | 63212487 | 63213087 | 63212487 | ID=MS.gene047480.t1.exon3;Parent=MS.gene047480.t1 |
chr2.4 | CDS | 63212487 | 63213087 | 63212487 | ID=cds.MS.gene047480.t1;Parent=MS.gene047480.t1 |
Gene Sequence |
Protein sequence |