Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene047488.t1 | XP_013462889.1 | 88.4 | 696 | 60 | 4 | 2 | 687 | 141 | 825 | 0.00E+00 | 1278.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene047488.t1 | Q9SSE9 | 42.2 | 753 | 329 | 13 | 15 | 678 | 155 | 890 | 1.0e-157 | 558.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene047488.t1 | A0A072V4L2 | 88.4 | 696 | 60 | 4 | 2 | 687 | 141 | 825 | 0.0e+00 | 1278.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene047488.t1 | TR | Jumonji |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene047488.t1 | MTR_2g024270 | 88.218 | 696 | 61 | 4 | 2 | 687 | 141 | 825 | 0.0 | 1218 |
MS.gene047488.t1 | MTR_2g024140 | 84.604 | 682 | 92 | 2 | 2 | 683 | 21 | 689 | 0.0 | 1163 |
MS.gene047488.t1 | MTR_4g132540 | 61.813 | 728 | 222 | 8 | 2 | 685 | 155 | 870 | 0.0 | 891 |
MS.gene047488.t1 | MTR_1g114150 | 49.091 | 715 | 305 | 12 | 15 | 679 | 343 | 1048 | 0.0 | 640 |
MS.gene047488.t1 | MTR_5g065200 | 49.570 | 698 | 314 | 12 | 15 | 679 | 140 | 832 | 0.0 | 618 |
MS.gene047488.t1 | MTR_1g069565 | 47.651 | 745 | 303 | 14 | 14 | 679 | 143 | 879 | 0.0 | 613 |
MS.gene047488.t1 | MTR_1g114130 | 48.257 | 717 | 312 | 13 | 15 | 679 | 327 | 1036 | 0.0 | 606 |
MS.gene047488.t1 | MTR_1g114070 | 45.557 | 709 | 331 | 13 | 15 | 679 | 225 | 922 | 0.0 | 573 |
MS.gene047488.t1 | MTR_1g069565 | 43.142 | 802 | 312 | 16 | 14 | 679 | 143 | 936 | 0.0 | 561 |
MS.gene047488.t1 | MTR_5g047620 | 47.320 | 653 | 273 | 16 | 89 | 679 | 152 | 795 | 3.92e-179 | 531 |
MS.gene047488.t1 | MTR_2g024240 | 82.624 | 282 | 44 | 2 | 363 | 644 | 112 | 388 | 5.32e-165 | 479 |
MS.gene047488.t1 | MTR_2g024240 | 89.899 | 99 | 9 | 1 | 183 | 280 | 1 | 99 | 1.97e-52 | 186 |
MS.gene047488.t1 | MTR_1g114150 | 44.224 | 606 | 279 | 12 | 15 | 570 | 343 | 939 | 1.10e-153 | 469 |
MS.gene047488.t1 | MTR_0020s0100 | 43.106 | 631 | 296 | 19 | 77 | 664 | 81 | 691 | 1.06e-151 | 457 |
MS.gene047488.t1 | MTR_1g083120 | 35.076 | 727 | 387 | 13 | 13 | 682 | 196 | 894 | 7.87e-144 | 443 |
MS.gene047488.t1 | MTR_1g083120 | 35.076 | 727 | 387 | 13 | 13 | 682 | 213 | 911 | 1.28e-143 | 443 |
MS.gene047488.t1 | MTR_7g117445 | 40.755 | 530 | 274 | 9 | 15 | 507 | 140 | 666 | 2.35e-129 | 404 |
MS.gene047488.t1 | MTR_7g117445 | 46.875 | 160 | 72 | 3 | 461 | 620 | 719 | 865 | 1.88e-32 | 134 |
MS.gene047488.t1 | MTR_7g117445 | 40.755 | 530 | 274 | 9 | 15 | 507 | 140 | 666 | 3.60e-129 | 405 |
MS.gene047488.t1 | MTR_7g117445 | 51.131 | 221 | 95 | 3 | 461 | 681 | 719 | 926 | 3.16e-58 | 212 |
MS.gene047488.t1 | MTR_7g117445 | 40.755 | 530 | 274 | 9 | 15 | 507 | 140 | 666 | 6.11e-129 | 404 |
MS.gene047488.t1 | MTR_7g117445 | 51.131 | 221 | 95 | 3 | 461 | 681 | 719 | 926 | 4.16e-58 | 212 |
MS.gene047488.t1 | MTR_7g117445 | 40.755 | 530 | 274 | 9 | 15 | 507 | 140 | 666 | 7.70e-129 | 405 |
MS.gene047488.t1 | MTR_7g117445 | 51.131 | 221 | 95 | 3 | 461 | 681 | 719 | 926 | 3.72e-58 | 212 |
MS.gene047488.t1 | MTR_1g083120 | 34.661 | 678 | 357 | 14 | 13 | 632 | 196 | 845 | 2.26e-126 | 395 |
MS.gene047488.t1 | MTR_1g083120 | 34.783 | 667 | 350 | 13 | 13 | 622 | 196 | 834 | 3.14e-126 | 395 |
MS.gene047488.t1 | MTR_1g008060 | 42.944 | 496 | 235 | 13 | 15 | 487 | 870 | 1340 | 3.29e-114 | 377 |
MS.gene047488.t1 | MTR_1g008060 | 62.581 | 155 | 58 | 0 | 530 | 684 | 1546 | 1700 | 6.60e-56 | 207 |
MS.gene047488.t1 | MTR_1g008060 | 42.944 | 496 | 235 | 13 | 15 | 487 | 861 | 1331 | 3.35e-114 | 377 |
MS.gene047488.t1 | MTR_1g008060 | 62.581 | 155 | 58 | 0 | 530 | 684 | 1537 | 1691 | 7.02e-56 | 207 |
MS.gene047488.t1 | MTR_2g011630 | 31.968 | 757 | 416 | 14 | 13 | 678 | 205 | 953 | 5.41e-111 | 358 |
MS.gene047488.t1 | MTR_8g465700 | 82.000 | 200 | 28 | 3 | 295 | 492 | 1 | 194 | 1.43e-102 | 315 |
MS.gene047488.t1 | MTR_2g011630 | 31.897 | 696 | 373 | 12 | 77 | 678 | 21 | 709 | 2.21e-101 | 326 |
MS.gene047488.t1 | MTR_2g011630 | 31.897 | 696 | 373 | 12 | 77 | 678 | 53 | 741 | 2.42e-101 | 327 |
MS.gene047488.t1 | MTR_8g465720 | 65.789 | 190 | 13 | 4 | 509 | 688 | 18 | 165 | 3.64e-71 | 228 |
MS.gene047488.t1 | MTR_8g062940 | 35.735 | 347 | 192 | 8 | 15 | 347 | 33 | 362 | 6.07e-53 | 187 |
MS.gene047488.t1 | MTR_4g091520 | 34.641 | 306 | 176 | 4 | 219 | 505 | 648 | 948 | 5.47e-47 | 180 |
MS.gene047488.t1 | MTR_4g091520 | 34.146 | 246 | 146 | 7 | 13 | 245 | 258 | 500 | 1.17e-31 | 132 |
MS.gene047488.t1 | MTR_4g091520 | 34.641 | 306 | 176 | 4 | 219 | 505 | 683 | 983 | 5.49e-47 | 180 |
MS.gene047488.t1 | MTR_4g091520 | 34.146 | 246 | 146 | 7 | 13 | 245 | 258 | 500 | 1.23e-31 | 132 |
MS.gene047488.t1 | MTR_4g091520 | 34.641 | 306 | 176 | 4 | 219 | 505 | 718 | 1018 | 6.37e-47 | 180 |
MS.gene047488.t1 | MTR_4g091520 | 43.005 | 193 | 93 | 3 | 505 | 681 | 1087 | 1278 | 3.80e-41 | 162 |
MS.gene047488.t1 | MTR_4g091520 | 34.146 | 246 | 146 | 7 | 13 | 245 | 258 | 500 | 1.81e-31 | 132 |
MS.gene047488.t1 | MTR_4g091520 | 34.641 | 306 | 176 | 4 | 219 | 505 | 718 | 1018 | 6.40e-47 | 179 |
MS.gene047488.t1 | MTR_4g091520 | 34.146 | 246 | 146 | 7 | 13 | 245 | 258 | 500 | 1.75e-31 | 132 |
MS.gene047488.t1 | MTR_0295s0020 | 48.101 | 158 | 82 | 0 | 353 | 510 | 9 | 166 | 4.99e-45 | 159 |
MS.gene047488.t1 | MTR_8g013920 | 63.218 | 87 | 28 | 2 | 390 | 476 | 40 | 122 | 1.41e-28 | 113 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene047488.t1 | AT1G11950 | 55.102 | 686 | 289 | 8 | 12 | 682 | 190 | 871 | 0.0 | 770 |
MS.gene047488.t1 | AT1G11950 | 55.102 | 686 | 289 | 8 | 12 | 682 | 190 | 871 | 0.0 | 770 |
MS.gene047488.t1 | AT1G62310 | 55.244 | 677 | 280 | 5 | 9 | 663 | 203 | 878 | 0.0 | 751 |
MS.gene047488.t1 | AT1G11950 | 52.760 | 616 | 272 | 8 | 12 | 612 | 190 | 801 | 0.0 | 654 |
MS.gene047488.t1 | AT3G07610 | 47.695 | 499 | 214 | 8 | 213 | 680 | 410 | 892 | 4.78e-139 | 433 |
MS.gene047488.t1 | AT3G07610 | 42.781 | 187 | 102 | 4 | 15 | 197 | 155 | 340 | 8.64e-37 | 148 |
MS.gene047488.t1 | AT3G07610 | 44.981 | 518 | 222 | 9 | 213 | 680 | 410 | 914 | 8.77e-130 | 409 |
MS.gene047488.t1 | AT3G07610 | 42.781 | 187 | 102 | 4 | 15 | 197 | 155 | 340 | 8.68e-37 | 148 |
MS.gene047488.t1 | AT4G00990 | 42.436 | 509 | 254 | 12 | 14 | 497 | 79 | 573 | 2.28e-121 | 380 |
MS.gene047488.t1 | AT4G00990 | 63.636 | 88 | 32 | 0 | 533 | 620 | 683 | 770 | 1.04e-29 | 125 |
MS.gene047488.t1 | AT4G00990 | 42.436 | 509 | 254 | 12 | 14 | 497 | 79 | 573 | 2.68e-121 | 380 |
MS.gene047488.t1 | AT4G00990 | 59.375 | 96 | 39 | 0 | 533 | 628 | 683 | 778 | 1.73e-30 | 128 |
MS.gene047488.t1 | AT4G00990 | 42.436 | 509 | 254 | 12 | 14 | 497 | 79 | 573 | 4.45e-121 | 381 |
MS.gene047488.t1 | AT4G00990 | 57.516 | 153 | 65 | 0 | 533 | 685 | 683 | 835 | 1.05e-52 | 196 |
MS.gene047488.t1 | AT1G09060 | 32.773 | 714 | 408 | 13 | 15 | 682 | 220 | 907 | 3.60e-116 | 371 |
MS.gene047488.t1 | AT1G09060 | 32.773 | 714 | 408 | 13 | 15 | 682 | 220 | 907 | 3.60e-116 | 371 |
MS.gene047488.t1 | AT1G09060 | 32.773 | 714 | 408 | 13 | 15 | 682 | 206 | 893 | 4.71e-116 | 370 |
MS.gene047488.t1 | AT1G09060 | 32.773 | 714 | 408 | 13 | 15 | 682 | 206 | 893 | 4.71e-116 | 370 |
MS.gene047488.t1 | AT4G21430 | 29.041 | 730 | 423 | 18 | 15 | 686 | 227 | 919 | 2.45e-85 | 288 |
MS.gene047488.t1 | AT3G07610 | 41.581 | 291 | 140 | 5 | 213 | 483 | 410 | 690 | 7.69e-59 | 212 |
MS.gene047488.t1 | AT3G07610 | 42.781 | 187 | 102 | 4 | 15 | 197 | 155 | 340 | 1.81e-36 | 147 |
Find 121 sgRNAs with CRISPR-Local
Find 174 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGAAGTTATACCTTGTATTT+TGG | 0.175006 | 2.4:-63316455 | None:intergenic |
CCACAACCACCTAGTTCTTT+TGG | 0.232816 | 2.4:-63317086 | None:intergenic |
ATAAGTATGCCTAAATTCTT+TGG | 0.242870 | 2.4:-63318286 | None:intergenic |
CATATTTCAAAGGAACATTT+AGG | 0.255943 | 2.4:-63316864 | None:intergenic |
GATATCTCCAATTGACATAT+TGG | 0.276410 | 2.4:-63316139 | None:intergenic |
TCTCTTGCCCTGTGATTCTT+AGG | 0.277632 | 2.4:-63318853 | None:intergenic |
AGGAATGTTGGATAATATAT+TGG | 0.300780 | 2.4:+63315783 | None:intergenic |
GAAGGTCTTGTTCAAGATAA+TGG | 0.311719 | 2.4:+63318147 | MS.gene047488:CDS |
ATATCTCCAATTGACATATT+GGG | 0.312488 | 2.4:-63316138 | None:intergenic |
TTACTTGTATCACAAGTTAT+TGG | 0.332796 | 2.4:-63316996 | None:intergenic |
GAAAACACTCCAAAGAATTT+AGG | 0.338721 | 2.4:+63318277 | MS.gene047488:CDS |
AAGAAGCTAGAGGAAGAGTT+TGG | 0.361005 | 2.4:+63318462 | MS.gene047488:CDS |
TGACCAAGTTGTTAAAGAAT+TGG | 0.364202 | 2.4:+63319026 | MS.gene047488:CDS |
AGATGGGAGGATATATAAAT+TGG | 0.365687 | 2.4:+63317142 | MS.gene047488:CDS |
ATCACTATTCACATTCCATT+TGG | 0.366620 | 2.4:-63317045 | None:intergenic |
AGAAACAGCTGGTGCACTTT+GGG | 0.368153 | 2.4:+63318209 | MS.gene047488:CDS |
CTTCCAATTCTTTAACAACT+TGG | 0.368676 | 2.4:-63319029 | None:intergenic |
CAGATGTCAAGTGACCTTAT+AGG | 0.384738 | 2.4:+63317272 | MS.gene047488:CDS |
AGTTGCCACCAAATGTTATA+AGG | 0.385343 | 2.4:+63317815 | MS.gene047488:CDS |
TCCTCTGCCAAGCTCTTCTC+TGG | 0.390375 | 2.4:-63317875 | None:intergenic |
GACACTCGCCAGTTCTTTGA+AGG | 0.395120 | 2.4:+63317616 | MS.gene047488:CDS |
AAAGAATTGGAAGCTTTCAT+TGG | 0.399008 | 2.4:+63319039 | MS.gene047488:CDS |
TTGTGATACAAGTAATTTAG+AGG | 0.403494 | 2.4:+63317004 | MS.gene047488:CDS |
ATTGCAATTCTTACGGCAAA+AGG | 0.411110 | 2.4:-63316175 | None:intergenic |
GTTTAAGATGTATTAAAGAT+TGG | 0.412154 | 2.4:+63315994 | MS.gene047488:CDS |
GTTGGGAGCCAATGGTTACT+TGG | 0.413326 | 2.4:+63317381 | MS.gene047488:CDS |
ATTTAGGACAGCTTCTATAA+AGG | 0.417061 | 2.4:-63316848 | None:intergenic |
CATTGCAATTGCAATTCTTA+CGG | 0.420522 | 2.4:-63316182 | None:intergenic |
TTATCATGACATGGAGTTTG+TGG | 0.423540 | 2.4:-63316580 | None:intergenic |
CTTTATAACCTTCAAAGAAC+TGG | 0.427941 | 2.4:-63317624 | None:intergenic |
CACCGTTCCTCCAATACTCT+TGG | 0.432232 | 2.4:-63317313 | None:intergenic |
GAGCACATAAGGCTCAAGAT+AGG | 0.434348 | 2.4:+63318121 | MS.gene047488:CDS |
AAGTCAGGCCTTATAACATT+TGG | 0.438608 | 2.4:-63317823 | None:intergenic |
AGAACATCAGATATTAGAAC+AGG | 0.439067 | 2.4:-63317338 | None:intergenic |
AATTTATATATCCTCCCATC+TGG | 0.440912 | 2.4:-63317140 | None:intergenic |
GTGATAGATGATGGCACAAA+AGG | 0.451379 | 2.4:-63318174 | None:intergenic |
ACTTTGCAGTATCTTCTCTT+CGG | 0.452091 | 2.4:-63318239 | None:intergenic |
CAGAAACAGCTGGTGCACTT+TGG | 0.453707 | 2.4:+63318208 | MS.gene047488:CDS |
ATGTTGAGATATTTACCAAA+TGG | 0.459203 | 2.4:+63317030 | MS.gene047488:CDS |
TATTTAAATTCCAAGAGTAT+TGG | 0.460840 | 2.4:+63317303 | MS.gene047488:CDS |
GTATTTCTTTGCAACAACTA+AGG | 0.462093 | 2.4:-63316887 | None:intergenic |
AATGTTTGCTTGTGTTCAAA+AGG | 0.473646 | 2.4:+63316201 | MS.gene047488:CDS |
AGGTACCCCAATATGTCAAT+TGG | 0.473897 | 2.4:+63316132 | MS.gene047488:intron |
GGATCGCAATACTCTTGAAA+TGG | 0.475406 | 2.4:-63317763 | None:intergenic |
TTAAATTCCAAGAGTATTGG+AGG | 0.475955 | 2.4:+63317306 | MS.gene047488:CDS |
AAATGATAATTCAAATGTAC+AGG | 0.476218 | 2.4:+63317442 | MS.gene047488:CDS |
TTGCAATTCTTACGGCAAAA+GGG | 0.477440 | 2.4:-63316174 | None:intergenic |
TTATTGTTCTCCAGTAAAAG+AGG | 0.483787 | 2.4:+63318305 | MS.gene047488:CDS |
GTAGTAAATTAATCATATAT+CGG | 0.484803 | 2.4:-63316378 | None:intergenic |
GTTCTTTGAAGGTTATAAAG+AGG | 0.497551 | 2.4:+63317627 | MS.gene047488:CDS |
GTCGACTTCCTAAGAATCAC+AGG | 0.505039 | 2.4:+63318845 | MS.gene047488:CDS |
ACACCTTCAGATTTCTCACT+TGG | 0.506166 | 2.4:-63318634 | None:intergenic |
GTGTTCAAAAGGAATGATCA+AGG | 0.509692 | 2.4:+63316212 | MS.gene047488:CDS |
AACAAGGGACAGGATTGAGT+TGG | 0.510060 | 2.4:+63317363 | MS.gene047488:CDS |
ACAAACTCCATGTCATGATA+AGG | 0.516847 | 2.4:+63316582 | MS.gene047488:CDS |
TGTACAGGCTATCGATTGCT+TGG | 0.517879 | 2.4:+63317457 | MS.gene047488:CDS |
ATGTCATCAGTGCTTGAGAA+AGG | 0.520090 | 2.4:+63315926 | MS.gene047488:CDS |
TGGTTGTGGTGGCTGTGTGA+TGG | 0.522574 | 2.4:+63317100 | MS.gene047488:CDS |
AGGATTGAGTTGGGAGCCAA+TGG | 0.523462 | 2.4:+63317373 | MS.gene047488:CDS |
TTCAGATTTCTCACTTGGTG+AGG | 0.524957 | 2.4:-63318629 | None:intergenic |
AGCACATAAGGCTCAAGATA+GGG | 0.524973 | 2.4:+63318122 | MS.gene047488:CDS |
GAGTATTGCGATCCTCGAGC+TGG | 0.528942 | 2.4:+63317772 | MS.gene047488:CDS |
TCAGGCCTTATAACATTTGG+TGG | 0.529368 | 2.4:-63317820 | None:intergenic |
GTATCACAAGTTATTGGTAG+AGG | 0.529567 | 2.4:-63316990 | None:intergenic |
ACAAGGGACAGGATTGAGTT+GGG | 0.531143 | 2.4:+63317364 | MS.gene047488:CDS |
TCAGATTTCTCACTTGGTGA+GGG | 0.534163 | 2.4:-63318628 | None:intergenic |
CTGAAACGCATTCTTCCAGA+TGG | 0.536903 | 2.4:+63317125 | MS.gene047488:CDS |
AAGGCTCAAGATAGGGAAGA+AGG | 0.536972 | 2.4:+63318129 | MS.gene047488:CDS |
ATGATAAGGAGCGTATGTAT+TGG | 0.537974 | 2.4:+63316596 | MS.gene047488:CDS |
ACCAGAGAAGAGCTTGGCAG+AGG | 0.538284 | 2.4:+63317874 | MS.gene047488:CDS |
GATGTTCTCAAACAAGGGAC+AGG | 0.541890 | 2.4:+63317353 | MS.gene047488:CDS |
ATATCTGATGTTCTCAAACA+AGG | 0.545240 | 2.4:+63317347 | MS.gene047488:CDS |
CTTTGTGTCACCAGAAAATG+TGG | 0.546636 | 2.4:+63318792 | MS.gene047488:CDS |
TGCAATTCTTACGGCAAAAG+GGG | 0.547428 | 2.4:-63316173 | None:intergenic |
GAGATTGAAGCCAAAATACA+AGG | 0.547821 | 2.4:+63316445 | MS.gene047488:CDS |
ACTTGGTGAGGGCATCCAGC+AGG | 0.549347 | 2.4:-63318617 | None:intergenic |
AATGTTATAAGGCCTGACTT+AGG | 0.554124 | 2.4:+63317826 | MS.gene047488:CDS |
TTCTTTGAAGGTTATAAAGA+GGG | 0.554859 | 2.4:+63317628 | MS.gene047488:CDS |
CGATTGCTTGGCTAGTTGTG+AGG | 0.554938 | 2.4:+63317469 | MS.gene047488:CDS |
TTCCAAGAGTATTGGAGGAA+CGG | 0.556361 | 2.4:+63317311 | MS.gene047488:CDS |
TATCTGATGTTCTCAAACAA+GGG | 0.560966 | 2.4:+63317348 | MS.gene047488:CDS |
CCAAAAGAACTAGGTGGTTG+TGG | 0.561255 | 2.4:+63317086 | MS.gene047488:CDS |
ACAACTAAGGCATATTTCAA+AGG | 0.561651 | 2.4:-63316874 | None:intergenic |
AAAACAAAAGAATGTTGAGA+AGG | 0.573446 | 2.4:+63317208 | MS.gene047488:CDS |
AATGCTCTCCAAGTAACCAT+TGG | 0.575828 | 2.4:-63317389 | None:intergenic |
TGAAACTTCATTTCAAAGCG+TGG | 0.577340 | 2.4:-63316927 | None:intergenic |
TAACAACTTGGTCAACAGCA+TGG | 0.580070 | 2.4:-63319017 | None:intergenic |
AGATGCTCAAGCTAAAAGAC+TGG | 0.588373 | 2.4:+63317677 | MS.gene047488:CDS |
AAATGGAATGTGAATAGTGA+TGG | 0.595578 | 2.4:+63317047 | MS.gene047488:CDS |
TTGGTGGCAACTTTGCAGCA+AGG | 0.598809 | 2.4:-63317804 | None:intergenic |
AACGGATAAACTCGTCACAA+TGG | 0.599920 | 2.4:-63317735 | None:intergenic |
AAAGATACATCAGAAACAGC+TGG | 0.604136 | 2.4:+63318198 | MS.gene047488:CDS |
GGTATCTCAATCTCTGAACA+TGG | 0.604496 | 2.4:-63316559 | None:intergenic |
GAAGCAGTATTTATACCTGC+TGG | 0.606997 | 2.4:+63318602 | MS.gene047488:CDS |
TAAGGTCACTTGACATCTGA+CGG | 0.610508 | 2.4:-63317268 | None:intergenic |
TATCTCCAATTGACATATTG+GGG | 0.611778 | 2.4:-63316137 | None:intergenic |
TATGGAACCAGAGAAGAGCT+TGG | 0.615802 | 2.4:+63317868 | MS.gene047488:CDS |
TGTGATACAAGTAATTTAGA+GGG | 0.619079 | 2.4:+63317005 | MS.gene047488:CDS |
AGTTTCTGCTCAAAAGTCAA+AGG | 0.620576 | 2.4:-63318575 | None:intergenic |
TTTGTACAAGATACAAATTG+TGG | 0.620905 | 2.4:-63315954 | None:intergenic |
TGAGCATAAGAAGAAGCTAG+AGG | 0.629510 | 2.4:+63318452 | MS.gene047488:CDS |
GAATGTGCTCCAAAAGAACT+AGG | 0.632610 | 2.4:+63317077 | MS.gene047488:CDS |
TCACCAAGTGAGAAATCTGA+AGG | 0.633939 | 2.4:+63318631 | MS.gene047488:CDS |
ATCAGTGCTTGAGAAAGGAT+AGG | 0.639946 | 2.4:+63315931 | MS.gene047488:CDS |
CCATTGTGATATTGCAGACG+CGG | 0.646331 | 2.4:+63317915 | MS.gene047488:CDS |
AACGCATTCTTCCAGATGGG+AGG | 0.648445 | 2.4:+63317129 | MS.gene047488:CDS |
ACTCTTGAAATGGCAAACAA+CGG | 0.653289 | 2.4:-63317753 | None:intergenic |
ATACGCTCCTTATCATGACA+TGG | 0.656480 | 2.4:-63316589 | None:intergenic |
TGAAACGCATTCTTCCAGAT+GGG | 0.664559 | 2.4:+63317126 | MS.gene047488:CDS |
AGGTTGAGAATTCCAGCTCG+AGG | 0.678355 | 2.4:-63317784 | None:intergenic |
CCGCGTCTGCAATATCACAA+TGG | 0.685598 | 2.4:-63317915 | None:intergenic |
GGTCTTGTTCAAGATAATGG+AGG | 0.690295 | 2.4:+63318150 | MS.gene047488:CDS |
TGTTGCAAAGAAATACGCAA+CGG | 0.692822 | 2.4:+63316894 | MS.gene047488:CDS |
AAAGAACTAGGTGGTTGTGG+TGG | 0.707130 | 2.4:+63317089 | MS.gene047488:CDS |
AGAGGTGATGAATACATGCA+TGG | 0.707440 | 2.4:+63316960 | MS.gene047488:CDS |
ATAAACTCGTCACAATGGCG+CGG | 0.715284 | 2.4:-63317730 | None:intergenic |
TCGACTTCCTAAGAATCACA+GGG | 0.715729 | 2.4:+63318846 | MS.gene047488:CDS |
CAATTGGAGATATCGCAGAG+AGG | 0.732707 | 2.4:+63316148 | MS.gene047488:CDS |
GGCAAGAGAAGACAAACTTG+AGG | 0.737690 | 2.4:+63318867 | MS.gene047488:CDS |
TGTGCTCCAAAAGAACTAGG+TGG | 0.792037 | 2.4:+63317080 | MS.gene047488:CDS |
GGTGATGAATACATGCATGG+TGG | 0.798300 | 2.4:+63316963 | MS.gene047488:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAATTATTGTGTTTATTTAT+GGG | + | chr2.4:63318947-63318966 | MS.gene047488:intron | 10.0% |
!! | TTAATTATTGTGTTTATTTA+TGG | + | chr2.4:63318946-63318965 | MS.gene047488:intron | 10.0% |
!! | TTATAAAGAGAAATAAATAT+TGG | - | chr2.4:63317577-63317596 | None:intergenic | 10.0% |
!! | AATTATTGTGTTTATTTATG+GGG | + | chr2.4:63318948-63318967 | MS.gene047488:intron | 15.0% |
!! | AATTTGTGTTAAATAATTAC+AGG | + | chr2.4:63315881-63315900 | MS.gene047488:intron | 15.0% |
!! | GTAGTAAATTAATCATATAT+CGG | - | chr2.4:63316381-63316400 | None:intergenic | 15.0% |
!!! | TCTTTTGTATTTTGTTTTTT+TGG | + | chr2.4:63316793-63316812 | MS.gene047488:intron | 15.0% |
!! | AAATGATAATTCAAATGTAC+AGG | + | chr2.4:63317442-63317461 | MS.gene047488:CDS | 20.0% |
!! | AAGTTTCAATACAAAAATAG+AGG | + | chr2.4:63316942-63316961 | MS.gene047488:CDS | 20.0% |
!! | ATTATTGTGTTTATTTATGG+GGG | + | chr2.4:63318949-63318968 | MS.gene047488:intron | 20.0% |
!! | CAAAAGTCAAATAAAAACAT+TGG | - | chr2.4:63318434-63318453 | None:intergenic | 20.0% |
!! | CATTAGAGAAACAAATTTAA+GGG | - | chr2.4:63316262-63316281 | None:intergenic | 20.0% |
!! | GAAGAAGATATAAAAATTTC+TGG | + | chr2.4:63317650-63317669 | MS.gene047488:CDS | 20.0% |
!! | TCATTAGAGAAACAAATTTA+AGG | - | chr2.4:63316263-63316282 | None:intergenic | 20.0% |
!!! | AAAAATAAAAAGAGCACATA+AGG | + | chr2.4:63318110-63318129 | MS.gene047488:CDS | 20.0% |
!!! | ACATGTTTTGATATTTTGTT+TGG | - | chr2.4:63315910-63315929 | None:intergenic | 20.0% |
!!! | GTTTAAGATGTATTAAAGAT+TGG | + | chr2.4:63315994-63316013 | MS.gene047488:CDS | 20.0% |
!!! | TAAATAGCTTTTTTCCTATA+AGG | - | chr2.4:63317289-63317308 | None:intergenic | 20.0% |
!!! | TAAATTTTCCAAACTATTAC+TGG | + | chr2.4:63316695-63316714 | MS.gene047488:intron | 20.0% |
!!! | TAATAAAATACCTCTTTTAC+TGG | - | chr2.4:63318318-63318337 | None:intergenic | 20.0% |
!!! | TATTGTTCAATAATTTTGAC+AGG | + | chr2.4:63318026-63318045 | MS.gene047488:intron | 20.0% |
!!! | TATTTAAATTCCAAGAGTAT+TGG | + | chr2.4:63317303-63317322 | MS.gene047488:CDS | 20.0% |
!!! | TCACATATAATCAACATTTT+CGG | + | chr2.4:63318338-63318357 | MS.gene047488:intron | 20.0% |
!!! | TTTTTTTCATTTTTGCACAT+AGG | + | chr2.4:63316112-63316131 | MS.gene047488:intron | 20.0% |
! | AAAACAAAAGAATGTTGAGA+AGG | + | chr2.4:63317208-63317227 | MS.gene047488:CDS | 25.0% |
! | AACCAAAATAGTTGTCATAA+AGG | - | chr2.4:63315838-63315857 | None:intergenic | 25.0% |
! | ATAAGTATGCCTAAATTCTT+TGG | - | chr2.4:63318289-63318308 | None:intergenic | 25.0% |
! | ATATCTCCAATTGACATATT+GGG | - | chr2.4:63316141-63316160 | None:intergenic | 25.0% |
! | ATATGAGAGTTTATTGTTAG+TGG | - | chr2.4:63316531-63316550 | None:intergenic | 25.0% |
! | ATGTTGAGATATTTACCAAA+TGG | + | chr2.4:63317030-63317049 | MS.gene047488:CDS | 25.0% |
! | CAAGATTCTTAATCAATTAC+AGG | + | chr2.4:63318545-63318564 | MS.gene047488:intron | 25.0% |
! | CACAATAATTAAGCAAAGTT+TGG | - | chr2.4:63318938-63318957 | None:intergenic | 25.0% |
! | CATATTTCAAAGGAACATTT+AGG | - | chr2.4:63316867-63316886 | None:intergenic | 25.0% |
! | TAAAAACATTGGTCATGAAT+AGG | - | chr2.4:63318423-63318442 | None:intergenic | 25.0% |
! | TAACAATAAACTCTCATATC+AGG | + | chr2.4:63316532-63316551 | MS.gene047488:intron | 25.0% |
! | TATTAACAAATATGTGACCT+TGG | - | chr2.4:63316050-63316069 | None:intergenic | 25.0% |
! | TCAAAAATTAAGCAAAGAGA+TGG | - | chr2.4:63316406-63316425 | None:intergenic | 25.0% |
! | TGCAACATAGTAAGTATAAA+AGG | - | chr2.4:63316640-63316659 | None:intergenic | 25.0% |
! | TGTGATACAAGTAATTTAGA+GGG | + | chr2.4:63317005-63317024 | MS.gene047488:CDS | 25.0% |
! | TTACTTGTATCACAAGTTAT+TGG | - | chr2.4:63316999-63317018 | None:intergenic | 25.0% |
! | TTGTGATACAAGTAATTTAG+AGG | + | chr2.4:63317004-63317023 | MS.gene047488:CDS | 25.0% |
! | TTTCAATTTCAACGCTATAT+TGG | + | chr2.4:63317970-63317989 | MS.gene047488:intron | 25.0% |
! | TTTCGTAGTTAAATTTCCTT+TGG | + | chr2.4:63317497-63317516 | MS.gene047488:intron | 25.0% |
! | TTTGTACAAGATACAAATTG+TGG | - | chr2.4:63315957-63315976 | None:intergenic | 25.0% |
!! | ACATTTTCAAACTCATCATA+AGG | - | chr2.4:63317706-63317725 | None:intergenic | 25.0% |
!! | GTGATATTTTTCTATGAAAC+AGG | + | chr2.4:63318978-63318997 | MS.gene047488:intron | 25.0% |
!! | TGAAGTTATACCTTGTATTT+TGG | - | chr2.4:63316458-63316477 | None:intergenic | 25.0% |
!! | TTCCTTTATGACAACTATTT+TGG | + | chr2.4:63315833-63315852 | MS.gene047488:intron | 25.0% |
!! | TTCTTTGAAGGTTATAAAGA+GGG | + | chr2.4:63317628-63317647 | MS.gene047488:CDS | 25.0% |
!!! | ACATACATGTACTTTTAAAG+AGG | - | chr2.4:63318680-63318699 | None:intergenic | 25.0% |
!!! | TATTTTGACTCATATAACTG+AGG | + | chr2.4:63318053-63318072 | MS.gene047488:CDS | 25.0% |
AAAGAATTGGAAGCTTTCAT+TGG | + | chr2.4:63319039-63319058 | MS.gene047488:CDS | 30.0% | |
AAATGGAATGTGAATAGTGA+TGG | + | chr2.4:63317047-63317066 | MS.gene047488:CDS | 30.0% | |
AACCTAAGAAACAAAGAAGT+TGG | - | chr2.4:63318394-63318413 | None:intergenic | 30.0% | |
AATGTTTGCTTGTGTTCAAA+AGG | + | chr2.4:63316201-63316220 | MS.gene047488:CDS | 30.0% | |
AATTTATATATCCTCCCATC+TGG | - | chr2.4:63317143-63317162 | None:intergenic | 30.0% | |
ACAACTAAGGCATATTTCAA+AGG | - | chr2.4:63316877-63316896 | None:intergenic | 30.0% | |
ACATCTAAATAACCATTCCA+AGG | + | chr2.4:63316030-63316049 | MS.gene047488:intron | 30.0% | |
AGAACATCAGATATTAGAAC+AGG | - | chr2.4:63317341-63317360 | None:intergenic | 30.0% | |
AGATGGGAGGATATATAAAT+TGG | + | chr2.4:63317142-63317161 | MS.gene047488:CDS | 30.0% | |
ATATCTGATGTTCTCAAACA+AGG | + | chr2.4:63317347-63317366 | MS.gene047488:CDS | 30.0% | |
ATCACTATTCACATTCCATT+TGG | - | chr2.4:63317048-63317067 | None:intergenic | 30.0% | |
CATTGCAATTGCAATTCTTA+CGG | - | chr2.4:63316185-63316204 | None:intergenic | 30.0% | |
CCAAAAACTTACATTGCTTA+TGG | + | chr2.4:63317850-63317869 | MS.gene047488:CDS | 30.0% | |
CTTCCAATTCTTTAACAACT+TGG | - | chr2.4:63319032-63319051 | None:intergenic | 30.0% | |
CTTTATAACCTTCAAAGAAC+TGG | - | chr2.4:63317627-63317646 | None:intergenic | 30.0% | |
GAAAACACTCCAAAGAATTT+AGG | + | chr2.4:63318277-63318296 | MS.gene047488:CDS | 30.0% | |
GATATCTCCAATTGACATAT+TGG | - | chr2.4:63316142-63316161 | None:intergenic | 30.0% | |
GTATTTCTTTGCAACAACTA+AGG | - | chr2.4:63316890-63316909 | None:intergenic | 30.0% | |
TATCTCCAATTGACATATTG+GGG | - | chr2.4:63316140-63316159 | None:intergenic | 30.0% | |
TATCTGATGTTCTCAAACAA+GGG | + | chr2.4:63317348-63317367 | MS.gene047488:CDS | 30.0% | |
TGACCAAGTTGTTAAAGAAT+TGG | + | chr2.4:63319026-63319045 | MS.gene047488:CDS | 30.0% | |
TGGAATTCACATCAAAAGAA+AGG | - | chr2.4:63318918-63318937 | None:intergenic | 30.0% | |
TTATTGTTCTCCAGTAAAAG+AGG | + | chr2.4:63318305-63318324 | MS.gene047488:CDS | 30.0% | |
TTCTCTTTATAAACCTTTGC+AGG | + | chr2.4:63317585-63317604 | MS.gene047488:intron | 30.0% | |
! | ATGCATATATCCACATTTTC+TGG | - | chr2.4:63318805-63318824 | None:intergenic | 30.0% |
! | ATTTAGGACAGCTTCTATAA+AGG | - | chr2.4:63316851-63316870 | None:intergenic | 30.0% |
! | CCATAAGCAATGTAAGTTTT+TGG | - | chr2.4:63317853-63317872 | None:intergenic | 30.0% |
! | GTATCTTTTGTGATAGATGA+TGG | - | chr2.4:63318186-63318205 | None:intergenic | 30.0% |
! | GTTCTTTGAAGGTTATAAAG+AGG | + | chr2.4:63317627-63317646 | MS.gene047488:CDS | 30.0% |
! | TTTTCAAACTCATCATAAGG+TGG | - | chr2.4:63317703-63317722 | None:intergenic | 30.0% |
!! | TTAAATTCCAAGAGTATTGG+AGG | + | chr2.4:63317306-63317325 | MS.gene047488:CDS | 30.0% |
AAAGATACATCAGAAACAGC+TGG | + | chr2.4:63318198-63318217 | MS.gene047488:CDS | 35.0% | |
AATGTTATAAGGCCTGACTT+AGG | + | chr2.4:63317826-63317845 | MS.gene047488:CDS | 35.0% | |
ACAAACTCCATGTCATGATA+AGG | + | chr2.4:63316582-63316601 | MS.gene047488:CDS | 35.0% | |
ACAAATATGTGACCTTGGAA+TGG | - | chr2.4:63316045-63316064 | None:intergenic | 35.0% | |
ACTCTTGAAATGGCAAACAA+CGG | - | chr2.4:63317756-63317775 | None:intergenic | 35.0% | |
ACTTTGCAGTATCTTCTCTT+CGG | - | chr2.4:63318242-63318261 | None:intergenic | 35.0% | |
AGTTGCCACCAAATGTTATA+AGG | + | chr2.4:63317815-63317834 | MS.gene047488:CDS | 35.0% | |
AGTTTCTGCTCAAAAGTCAA+AGG | - | chr2.4:63318578-63318597 | None:intergenic | 35.0% | |
ATTGCAATTCTTACGGCAAA+AGG | - | chr2.4:63316178-63316197 | None:intergenic | 35.0% | |
CGTCAATACCAGTAATAGTT+TGG | - | chr2.4:63316706-63316725 | None:intergenic | 35.0% | |
GAGATTGAAGCCAAAATACA+AGG | + | chr2.4:63316445-63316464 | MS.gene047488:CDS | 35.0% | |
GTATCACAAGTTATTGGTAG+AGG | - | chr2.4:63316993-63317012 | None:intergenic | 35.0% | |
GTGTTCAAAAGGAATGATCA+AGG | + | chr2.4:63316212-63316231 | MS.gene047488:CDS | 35.0% | |
TGAAACTTCATTTCAAAGCG+TGG | - | chr2.4:63316930-63316949 | None:intergenic | 35.0% | |
TGTTGCAAAGAAATACGCAA+CGG | + | chr2.4:63316894-63316913 | MS.gene047488:CDS | 35.0% | |
TTATCATGACATGGAGTTTG+TGG | - | chr2.4:63316583-63316602 | None:intergenic | 35.0% | |
TTGCAATTCTTACGGCAAAA+GGG | - | chr2.4:63316177-63316196 | None:intergenic | 35.0% | |
! | AAGTCAGGCCTTATAACATT+TGG | - | chr2.4:63317826-63317845 | None:intergenic | 35.0% |
! | ATGATAAGGAGCGTATGTAT+TGG | + | chr2.4:63316596-63316615 | MS.gene047488:CDS | 35.0% |
! | CACCAACTTCTTTGTTTCTT+AGG | + | chr2.4:63318389-63318408 | MS.gene047488:intron | 35.0% |
! | GTGTCAATTTTTACCTGCAA+AGG | - | chr2.4:63317601-63317620 | None:intergenic | 35.0% |
! | TTGACTTTTGAGCAGAAACT+TGG | + | chr2.4:63318578-63318597 | MS.gene047488:CDS | 35.0% |
!! | GAAGGTCTTGTTCAAGATAA+TGG | + | chr2.4:63318147-63318166 | MS.gene047488:CDS | 35.0% |
!! | TAAGTTTTTGGACCTAAGTC+AGG | - | chr2.4:63317841-63317860 | None:intergenic | 35.0% |
AACGGATAAACTCGTCACAA+TGG | - | chr2.4:63317738-63317757 | None:intergenic | 40.0% | |
AAGAAGCTAGAGGAAGAGTT+TGG | + | chr2.4:63318462-63318481 | MS.gene047488:CDS | 40.0% | |
AATGCTCTCCAAGTAACCAT+TGG | - | chr2.4:63317392-63317411 | None:intergenic | 40.0% | |
ACACCTTCAGATTTCTCACT+TGG | - | chr2.4:63318637-63318656 | None:intergenic | 40.0% | |
AGAGGTGATGAATACATGCA+TGG | + | chr2.4:63316960-63316979 | MS.gene047488:CDS | 40.0% | |
AGATGCTCAAGCTAAAAGAC+TGG | + | chr2.4:63317677-63317696 | MS.gene047488:CDS | 40.0% | |
AGCACATAAGGCTCAAGATA+GGG | + | chr2.4:63318122-63318141 | MS.gene047488:CDS | 40.0% | |
AGGTACCCCAATATGTCAAT+TGG | + | chr2.4:63316132-63316151 | MS.gene047488:intron | 40.0% | |
ATACGCTCCTTATCATGACA+TGG | - | chr2.4:63316592-63316611 | None:intergenic | 40.0% | |
ATCAGTGCTTGAGAAAGGAT+AGG | + | chr2.4:63315931-63315950 | MS.gene047488:CDS | 40.0% | |
ATGTCATCAGTGCTTGAGAA+AGG | + | chr2.4:63315926-63315945 | MS.gene047488:CDS | 40.0% | |
CAGATGTCAAGTGACCTTAT+AGG | + | chr2.4:63317272-63317291 | MS.gene047488:CDS | 40.0% | |
CTTTGTGTCACCAGAAAATG+TGG | + | chr2.4:63318792-63318811 | MS.gene047488:CDS | 40.0% | |
GAAGCAGTATTTATACCTGC+TGG | + | chr2.4:63318602-63318621 | MS.gene047488:CDS | 40.0% | |
GAATGTGCTCCAAAAGAACT+AGG | + | chr2.4:63317077-63317096 | MS.gene047488:CDS | 40.0% | |
GGATCGCAATACTCTTGAAA+TGG | - | chr2.4:63317766-63317785 | None:intergenic | 40.0% | |
GGTATCTCAATCTCTGAACA+TGG | - | chr2.4:63316562-63316581 | None:intergenic | 40.0% | |
GTAAGAACGAACATCACCAA+AGG | - | chr2.4:63317516-63317535 | None:intergenic | 40.0% | |
TAACAACTTGGTCAACAGCA+TGG | - | chr2.4:63319020-63319039 | None:intergenic | 40.0% | |
TAAGGTCACTTGACATCTGA+CGG | - | chr2.4:63317271-63317290 | None:intergenic | 40.0% | |
TCACCAAGTGAGAAATCTGA+AGG | + | chr2.4:63318631-63318650 | MS.gene047488:CDS | 40.0% | |
TCGACTTCCTAAGAATCACA+GGG | + | chr2.4:63318846-63318865 | MS.gene047488:CDS | 40.0% | |
TGAAACGCATTCTTCCAGAT+GGG | + | chr2.4:63317126-63317145 | MS.gene047488:CDS | 40.0% | |
TGAGCATAAGAAGAAGCTAG+AGG | + | chr2.4:63318452-63318471 | MS.gene047488:CDS | 40.0% | |
TGCAATTCTTACGGCAAAAG+GGG | - | chr2.4:63316176-63316195 | None:intergenic | 40.0% | |
TTGGTGCGACAAGTATAAGA+TGG | + | chr2.4:63317989-63318008 | MS.gene047488:intron | 40.0% | |
! | GTGATAGATGATGGCACAAA+AGG | - | chr2.4:63318177-63318196 | None:intergenic | 40.0% |
! | TCAGATTTCTCACTTGGTGA+GGG | - | chr2.4:63318631-63318650 | None:intergenic | 40.0% |
! | TCAGGCCTTATAACATTTGG+TGG | - | chr2.4:63317823-63317842 | None:intergenic | 40.0% |
! | TTCAGATTTCTCACTTGGTG+AGG | - | chr2.4:63318632-63318651 | None:intergenic | 40.0% |
!! | GGTCTTGTTCAAGATAATGG+AGG | + | chr2.4:63318150-63318169 | MS.gene047488:CDS | 40.0% |
!! | TTCCAAGAGTATTGGAGGAA+CGG | + | chr2.4:63317311-63317330 | MS.gene047488:CDS | 40.0% |
!!! | TCTTTTAGCTTGAGCATCTC+TGG | - | chr2.4:63317676-63317695 | None:intergenic | 40.0% |
AAAGAACTAGGTGGTTGTGG+TGG | + | chr2.4:63317089-63317108 | MS.gene047488:CDS | 45.0% | |
AACAAGGGACAGGATTGAGT+TGG | + | chr2.4:63317363-63317382 | MS.gene047488:CDS | 45.0% | |
AAGGCTCAAGATAGGGAAGA+AGG | + | chr2.4:63318129-63318148 | MS.gene047488:CDS | 45.0% | |
ACAAGGGACAGGATTGAGTT+GGG | + | chr2.4:63317364-63317383 | MS.gene047488:CDS | 45.0% | |
AGAAACAGCTGGTGCACTTT+GGG | + | chr2.4:63318209-63318228 | MS.gene047488:CDS | 45.0% | |
ATAAACTCGTCACAATGGCG+CGG | - | chr2.4:63317733-63317752 | None:intergenic | 45.0% | |
CAATTGGAGATATCGCAGAG+AGG | + | chr2.4:63316148-63316167 | MS.gene047488:CDS | 45.0% | |
CCAAAAGAACTAGGTGGTTG+TGG | + | chr2.4:63317086-63317105 | MS.gene047488:CDS | 45.0% | |
CCATTGTGATATTGCAGACG+CGG | + | chr2.4:63317915-63317934 | MS.gene047488:CDS | 45.0% | |
CTGAAACGCATTCTTCCAGA+TGG | + | chr2.4:63317125-63317144 | MS.gene047488:CDS | 45.0% | |
GAGCACATAAGGCTCAAGAT+AGG | + | chr2.4:63318121-63318140 | MS.gene047488:CDS | 45.0% | |
GATGTTCTCAAACAAGGGAC+AGG | + | chr2.4:63317353-63317372 | MS.gene047488:CDS | 45.0% | |
GGCAAGAGAAGACAAACTTG+AGG | + | chr2.4:63318867-63318886 | MS.gene047488:CDS | 45.0% | |
GGTGATGAATACATGCATGG+TGG | + | chr2.4:63316963-63316982 | MS.gene047488:CDS | 45.0% | |
TATGGAACCAGAGAAGAGCT+TGG | + | chr2.4:63317868-63317887 | MS.gene047488:CDS | 45.0% | |
TCTCTTGCCCTGTGATTCTT+AGG | - | chr2.4:63318856-63318875 | None:intergenic | 45.0% | |
TGTGCTCCAAAAGAACTAGG+TGG | + | chr2.4:63317080-63317099 | MS.gene047488:CDS | 45.0% | |
! | GTCGACTTCCTAAGAATCAC+AGG | + | chr2.4:63318845-63318864 | MS.gene047488:CDS | 45.0% |
! | TGTACAGGCTATCGATTGCT+TGG | + | chr2.4:63317457-63317476 | MS.gene047488:CDS | 45.0% |
!! | CCACAACCACCTAGTTCTTT+TGG | - | chr2.4:63317089-63317108 | None:intergenic | 45.0% |
AACGCATTCTTCCAGATGGG+AGG | + | chr2.4:63317129-63317148 | MS.gene047488:CDS | 50.0% | |
AGGTTGAGAATTCCAGCTCG+AGG | - | chr2.4:63317787-63317806 | None:intergenic | 50.0% | |
CACCGTTCCTCCAATACTCT+TGG | - | chr2.4:63317316-63317335 | None:intergenic | 50.0% | |
CAGAAACAGCTGGTGCACTT+TGG | + | chr2.4:63318208-63318227 | MS.gene047488:CDS | 50.0% | |
CCGCGTCTGCAATATCACAA+TGG | - | chr2.4:63317918-63317937 | None:intergenic | 50.0% | |
GACACTCGCCAGTTCTTTGA+AGG | + | chr2.4:63317616-63317635 | MS.gene047488:CDS | 50.0% | |
GTTGGGAGCCAATGGTTACT+TGG | + | chr2.4:63317381-63317400 | MS.gene047488:CDS | 50.0% | |
! | CGATTGCTTGGCTAGTTGTG+AGG | + | chr2.4:63317469-63317488 | MS.gene047488:CDS | 50.0% |
! | TTGGTGGCAACTTTGCAGCA+AGG | - | chr2.4:63317807-63317826 | None:intergenic | 50.0% |
!! | AGGATTGAGTTGGGAGCCAA+TGG | + | chr2.4:63317373-63317392 | MS.gene047488:CDS | 50.0% |
ACCAGAGAAGAGCTTGGCAG+AGG | + | chr2.4:63317874-63317893 | MS.gene047488:CDS | 55.0% | |
TCCTCTGCCAAGCTCTTCTC+TGG | - | chr2.4:63317878-63317897 | None:intergenic | 55.0% | |
TGGTTGTGGTGGCTGTGTGA+TGG | + | chr2.4:63317100-63317119 | MS.gene047488:CDS | 55.0% | |
! | GAGTATTGCGATCCTCGAGC+TGG | + | chr2.4:63317772-63317791 | MS.gene047488:CDS | 55.0% |
!! | ACTTGGTGAGGGCATCCAGC+AGG | - | chr2.4:63318620-63318639 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.4 | gene | 63315787 | 63319080 | 63315787 | ID=MS.gene047488 |
chr2.4 | mRNA | 63315787 | 63319080 | 63315787 | ID=MS.gene047488.t1;Parent=MS.gene047488 |
chr2.4 | exon | 63315787 | 63315804 | 63315787 | ID=MS.gene047488.t1.exon1;Parent=MS.gene047488.t1 |
chr2.4 | CDS | 63315787 | 63315804 | 63315787 | ID=cds.MS.gene047488.t1;Parent=MS.gene047488.t1 |
chr2.4 | exon | 63315903 | 63316015 | 63315903 | ID=MS.gene047488.t1.exon2;Parent=MS.gene047488.t1 |
chr2.4 | CDS | 63315903 | 63316015 | 63315903 | ID=cds.MS.gene047488.t1;Parent=MS.gene047488.t1 |
chr2.4 | exon | 63316134 | 63316233 | 63316134 | ID=MS.gene047488.t1.exon3;Parent=MS.gene047488.t1 |
chr2.4 | CDS | 63316134 | 63316233 | 63316134 | ID=cds.MS.gene047488.t1;Parent=MS.gene047488.t1 |
chr2.4 | exon | 63316334 | 63316466 | 63316334 | ID=MS.gene047488.t1.exon4;Parent=MS.gene047488.t1 |
chr2.4 | CDS | 63316334 | 63316466 | 63316334 | ID=cds.MS.gene047488.t1;Parent=MS.gene047488.t1 |
chr2.4 | exon | 63316554 | 63316617 | 63316554 | ID=MS.gene047488.t1.exon5;Parent=MS.gene047488.t1 |
chr2.4 | CDS | 63316554 | 63316617 | 63316554 | ID=cds.MS.gene047488.t1;Parent=MS.gene047488.t1 |
chr2.4 | exon | 63316821 | 63317490 | 63316821 | ID=MS.gene047488.t1.exon6;Parent=MS.gene047488.t1 |
chr2.4 | CDS | 63316821 | 63317490 | 63316821 | ID=cds.MS.gene047488.t1;Parent=MS.gene047488.t1 |
chr2.4 | exon | 63317607 | 63317936 | 63317607 | ID=MS.gene047488.t1.exon7;Parent=MS.gene047488.t1 |
chr2.4 | CDS | 63317607 | 63317936 | 63317607 | ID=cds.MS.gene047488.t1;Parent=MS.gene047488.t1 |
chr2.4 | exon | 63318048 | 63318326 | 63318048 | ID=MS.gene047488.t1.exon8;Parent=MS.gene047488.t1 |
chr2.4 | CDS | 63318048 | 63318326 | 63318048 | ID=cds.MS.gene047488.t1;Parent=MS.gene047488.t1 |
chr2.4 | exon | 63318411 | 63318483 | 63318411 | ID=MS.gene047488.t1.exon9;Parent=MS.gene047488.t1 |
chr2.4 | CDS | 63318411 | 63318483 | 63318411 | ID=cds.MS.gene047488.t1;Parent=MS.gene047488.t1 |
chr2.4 | exon | 63318567 | 63318652 | 63318567 | ID=MS.gene047488.t1.exon10;Parent=MS.gene047488.t1 |
chr2.4 | CDS | 63318567 | 63318652 | 63318567 | ID=cds.MS.gene047488.t1;Parent=MS.gene047488.t1 |
chr2.4 | exon | 63318769 | 63318888 | 63318769 | ID=MS.gene047488.t1.exon11;Parent=MS.gene047488.t1 |
chr2.4 | CDS | 63318769 | 63318888 | 63318769 | ID=cds.MS.gene047488.t1;Parent=MS.gene047488.t1 |
chr2.4 | exon | 63319000 | 63319080 | 63319000 | ID=MS.gene047488.t1.exon12;Parent=MS.gene047488.t1 |
chr2.4 | CDS | 63319000 | 63319080 | 63319000 | ID=cds.MS.gene047488.t1;Parent=MS.gene047488.t1 |
Gene Sequence |
Protein sequence |