Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene047609.t1 | AES99840.2 | 77.9 | 593 | 98 | 4 | 66 | 628 | 436 | 1025 | 1.80E-269 | 938.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene047609.t1 | Q9FWQ5 | 39.4 | 718 | 339 | 10 | 5 | 636 | 985 | 1692 | 2.4e-145 | 517.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene047609.t1 | G7KH97 | 77.9 | 593 | 98 | 4 | 66 | 628 | 436 | 1025 | 1.3e-269 | 938.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene047609.t1 | TR | TAZ |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene047609.t1 | MTR_5g085310 | 79.764 | 593 | 87 | 4 | 66 | 628 | 436 | 1025 | 0.0 | 966 |
| MS.gene047609.t1 | MTR_5g085310 | 76.744 | 43 | 10 | 0 | 21 | 63 | 524 | 566 | 2.03e-12 | 70.9 |
| MS.gene047609.t1 | MTR_6g017010 | 76.059 | 614 | 93 | 7 | 64 | 644 | 177 | 769 | 0.0 | 928 |
| MS.gene047609.t1 | MTR_6g017010 | 79.070 | 43 | 9 | 0 | 21 | 63 | 261 | 303 | 8.45e-13 | 72.0 |
| MS.gene047609.t1 | MTR_3g107960 | 69.834 | 663 | 116 | 6 | 64 | 644 | 546 | 1206 | 0.0 | 927 |
| MS.gene047609.t1 | MTR_3g107960 | 67.925 | 53 | 16 | 1 | 11 | 63 | 631 | 682 | 2.02e-12 | 71.2 |
| MS.gene047609.t1 | MTR_3g101100 | 68.538 | 677 | 115 | 7 | 64 | 644 | 721 | 1395 | 0.0 | 914 |
| MS.gene047609.t1 | MTR_3g101100 | 64.815 | 54 | 18 | 1 | 10 | 63 | 805 | 857 | 6.68e-13 | 72.8 |
| MS.gene047609.t1 | MTR_5g017020 | 68.682 | 645 | 71 | 10 | 45 | 644 | 2 | 560 | 0.0 | 816 |
| MS.gene047609.t1 | MTR_5g017020 | 74.291 | 564 | 60 | 8 | 45 | 563 | 2 | 525 | 0.0 | 798 |
| MS.gene047609.t1 | MTR_6g017000 | 63.002 | 473 | 138 | 5 | 65 | 502 | 469 | 939 | 0.0 | 599 |
| MS.gene047609.t1 | MTR_6g017000 | 64.151 | 53 | 18 | 1 | 11 | 63 | 549 | 600 | 1.47e-11 | 68.2 |
| MS.gene047609.t1 | MTR_4g005050 | 40.865 | 717 | 329 | 10 | 5 | 636 | 989 | 1695 | 6.83e-171 | 531 |
| MS.gene047609.t1 | MTR_6g017140 | 54.767 | 451 | 139 | 5 | 64 | 478 | 32 | 453 | 2.31e-168 | 488 |
| MS.gene047609.t1 | MTR_6g017140 | 64.151 | 53 | 18 | 1 | 11 | 63 | 102 | 153 | 4.42e-12 | 68.9 |
| MS.gene047609.t1 | MTR_0299s0030 | 77.215 | 158 | 32 | 1 | 345 | 502 | 146 | 299 | 2.38e-76 | 248 |
| MS.gene047609.t1 | MTR_6g017130 | 52.451 | 204 | 34 | 4 | 424 | 626 | 249 | 390 | 1.47e-55 | 194 |
| MS.gene047609.t1 | MTR_1g047940 | 51.064 | 188 | 32 | 4 | 447 | 634 | 71 | 198 | 5.45e-45 | 159 |
| MS.gene047609.t1 | MTR_1g047940 | 47.273 | 110 | 44 | 3 | 284 | 393 | 4 | 99 | 1.85e-21 | 93.2 |
| MS.gene047609.t1 | MTR_5g085317 | 78.723 | 94 | 20 | 0 | 288 | 381 | 1 | 94 | 3.98e-44 | 154 |
| MS.gene047609.t1 | MTR_6g017120 | 73.469 | 98 | 25 | 1 | 201 | 298 | 4 | 100 | 8.67e-43 | 151 |
| MS.gene047609.t1 | MTR_1g047930 | 60.227 | 88 | 29 | 2 | 155 | 240 | 277 | 360 | 3.67e-23 | 102 |
| MS.gene047609.t1 | MTR_6g017135 | 51.485 | 101 | 18 | 2 | 165 | 235 | 2 | 101 | 5.02e-22 | 93.2 |
| MS.gene047609.t1 | MTR_5g015680 | 37.500 | 72 | 44 | 1 | 557 | 627 | 184 | 255 | 7.48e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene047609.t1 | AT1G79000 | 40.669 | 718 | 330 | 11 | 5 | 636 | 952 | 1659 | 5.19e-174 | 538 |
| MS.gene047609.t1 | AT1G79000 | 40.669 | 718 | 330 | 11 | 5 | 636 | 976 | 1683 | 7.59e-174 | 538 |
| MS.gene047609.t1 | AT1G79000 | 40.669 | 718 | 330 | 11 | 5 | 636 | 976 | 1683 | 1.81e-173 | 538 |
| MS.gene047609.t1 | AT1G16710 | 42.447 | 662 | 285 | 11 | 64 | 636 | 973 | 1627 | 4.85e-168 | 522 |
| MS.gene047609.t1 | AT1G16710 | 42.447 | 662 | 285 | 11 | 64 | 636 | 973 | 1627 | 4.85e-168 | 522 |
| MS.gene047609.t1 | AT1G16710 | 42.447 | 662 | 285 | 11 | 64 | 636 | 973 | 1627 | 4.85e-168 | 522 |
| MS.gene047609.t1 | AT1G16710 | 42.447 | 662 | 285 | 11 | 64 | 636 | 1012 | 1666 | 5.35e-168 | 522 |
| MS.gene047609.t1 | AT1G16710 | 42.447 | 662 | 285 | 11 | 64 | 636 | 1012 | 1666 | 5.35e-168 | 522 |
| MS.gene047609.t1 | AT1G16710 | 42.447 | 662 | 285 | 11 | 64 | 636 | 1012 | 1666 | 5.35e-168 | 522 |
| MS.gene047609.t1 | AT1G16710 | 42.447 | 662 | 285 | 11 | 64 | 636 | 1012 | 1666 | 5.35e-168 | 522 |
| MS.gene047609.t1 | AT1G16710 | 42.447 | 662 | 285 | 11 | 64 | 636 | 1009 | 1663 | 5.96e-168 | 522 |
| MS.gene047609.t1 | AT1G16710 | 42.447 | 662 | 285 | 11 | 64 | 636 | 1038 | 1692 | 9.90e-168 | 522 |
| MS.gene047609.t1 | AT3G12980 | 40.393 | 713 | 330 | 13 | 5 | 636 | 876 | 1574 | 2.28e-165 | 514 |
| MS.gene047609.t1 | AT3G12980 | 40.393 | 713 | 330 | 13 | 5 | 636 | 957 | 1655 | 5.75e-165 | 514 |
| MS.gene047609.t1 | AT1G55970 | 38.810 | 706 | 345 | 14 | 5 | 636 | 751 | 1443 | 8.65e-152 | 475 |
| MS.gene047609.t1 | AT1G55970 | 36.111 | 720 | 359 | 13 | 5 | 636 | 751 | 1457 | 4.41e-140 | 444 |
| MS.gene047609.t1 | AT1G67220 | 38.341 | 639 | 293 | 13 | 67 | 616 | 734 | 1360 | 8.77e-135 | 428 |
| MS.gene047609.t1 | AT1G16710 | 46.914 | 405 | 176 | 6 | 66 | 433 | 1017 | 1419 | 4.37e-112 | 368 |
Find 108 sgRNAs with CRISPR-Local
Find 229 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCACACTTTGTCCTTCTTTC+AGG | 0.073241 | 5.3:+9380846 | None:intergenic |
| TTCTTTCTTCCTACTGAAAA+AGG | 0.113508 | 5.3:-9380377 | MS.gene047609:CDS |
| TAATCATCCCCTTTCTTTAA+AGG | 0.138974 | 5.3:+9380617 | None:intergenic |
| CCCTGGTAGACAATATATTT+TGG | 0.164787 | 5.3:+9379994 | None:intergenic |
| AGAGTAGATTGTTTGGAAAT+AGG | 0.201852 | 5.3:-9379576 | MS.gene047609:CDS |
| GAAAGTGAATAAGCAGTTTC+TGG | 0.202627 | 5.3:-9381194 | MS.gene047609:CDS |
| GAGTAGATTGTTTGGAAATA+GGG | 0.235125 | 5.3:-9379575 | MS.gene047609:CDS |
| CACTGAATGCAAGAAATTTC+AGG | 0.254650 | 5.3:-9379892 | MS.gene047609:CDS |
| GGCAGTGAAGAAGCAGTTTC+TGG | 0.255829 | 5.3:-9381938 | MS.gene047609:CDS |
| TTCCGAGTCTTTGCAATTCC+TGG | 0.259668 | 5.3:+9379083 | None:intergenic |
| TTACCAAAGGCGGCTAATTC+TGG | 0.284652 | 5.3:-9381597 | MS.gene047609:CDS |
| TGGTCACTTAGCACTGTTCT+TGG | 0.319724 | 5.3:+9381561 | None:intergenic |
| CTTCGTTTACCATGAGATAT+TGG | 0.325834 | 5.3:-9380808 | MS.gene047609:intron |
| TTGCATCACCAGAGTCTCTT+TGG | 0.327824 | 5.3:+9380184 | None:intergenic |
| GTTTCTTAACTTGCTACATA+TGG | 0.329539 | 5.3:-9380649 | MS.gene047609:CDS |
| TTGCCGTAGAGCTGAAGTTT+TGG | 0.336259 | 5.3:-9378823 | MS.gene047609:CDS |
| ATGCATCTCAATGCCGCCGC+TGG | 0.344335 | 5.3:-9379245 | MS.gene047609:CDS |
| CTTCTGTTTAAGCTGATTGA+AGG | 0.363488 | 5.3:-9380982 | MS.gene047609:CDS |
| AGTGTCAAATAGAACATTAA+AGG | 0.370702 | 5.3:-9380228 | MS.gene047609:CDS |
| CAGCAGTCTCCTTCAAAGTA+TGG | 0.375411 | 5.3:+9380326 | None:intergenic |
| GTCCTTGAGAGTAGATTGTT+TGG | 0.389989 | 5.3:-9379583 | MS.gene047609:CDS |
| GCACCAGAATTAGCCGCCTT+TGG | 0.391601 | 5.3:+9381594 | None:intergenic |
| AAGTGTGTTGATCATAACTA+TGG | 0.394998 | 5.3:+9379765 | None:intergenic |
| AGTATGTCAATCTGAGAATC+AGG | 0.404577 | 5.3:-9379401 | MS.gene047609:CDS |
| TCGCATTAGGATTGTGTAGA+TGG | 0.417229 | 5.3:+9379467 | None:intergenic |
| GATCTATAAGAGAATTTAGC+AGG | 0.417844 | 5.3:+9381148 | None:intergenic |
| CAGAGTCTCTTTGGAAGGCT+TGG | 0.425209 | 5.3:+9380193 | None:intergenic |
| TTTCGTTTGCCATACTTTGA+AGG | 0.426623 | 5.3:-9380335 | MS.gene047609:CDS |
| TTTCAGTAGGAAGAAAGAAA+TGG | 0.429433 | 5.3:+9380381 | None:intergenic |
| TTAGCAGGGTAATTCTCCTC+TGG | 0.429473 | 5.3:+9381163 | None:intergenic |
| TCATGCAAGAGAGAGAAAAC+TGG | 0.430015 | 5.3:-9381512 | MS.gene047609:CDS |
| TTTCTTAACTTGCTACATAT+GGG | 0.438212 | 5.3:-9380648 | MS.gene047609:CDS |
| TGCATCTCAATGCCGCCGCT+GGG | 0.440927 | 5.3:-9379244 | MS.gene047609:CDS |
| CGGCGTAGCTTATCATTCTT+CGG | 0.441625 | 5.3:+9380560 | None:intergenic |
| TCAGGAGTCAAATGAAGAAA+TGG | 0.442630 | 5.3:-9379383 | MS.gene047609:intron |
| ATCATTATGTTTAGTGTTGG+AGG | 0.449050 | 5.3:+9379609 | None:intergenic |
| TTCTTGATTTGAGAACAGTT+TGG | 0.456469 | 5.3:+9379195 | None:intergenic |
| CCCTTTCTTTAAAGGAGCAC+AGG | 0.457787 | 5.3:+9380625 | None:intergenic |
| AGAATTAGCCGCCTTTGGTA+AGG | 0.464266 | 5.3:+9381599 | None:intergenic |
| TCAGCAGGGTAATTCTCATC+TGG | 0.465105 | 5.3:+9381907 | None:intergenic |
| TGCCGTGAAGTGATAGTGTC+TGG | 0.465307 | 5.3:-9379930 | MS.gene047609:CDS |
| CAAACTGAAACTGAGACTTC+TGG | 0.468204 | 5.3:+9379533 | None:intergenic |
| AATATCATTATGTTTAGTGT+TGG | 0.474871 | 5.3:+9379606 | None:intergenic |
| AATCTATAAGAGAATTCAGC+AGG | 0.480043 | 5.3:+9381892 | None:intergenic |
| TGAGGTGCATACACTTTGTC+AGG | 0.483949 | 5.3:-9379732 | MS.gene047609:intron |
| AAAGAAATGGTCATATATGT+TGG | 0.488070 | 5.3:+9380394 | None:intergenic |
| AGTGGGGTGAATGCAATAGA+TGG | 0.491374 | 5.3:-9381731 | MS.gene047609:CDS |
| GCCTGTGCTCCTTTAAAGAA+AGG | 0.492083 | 5.3:-9380626 | MS.gene047609:CDS |
| TATGACAGACAACAATTCAA+TGG | 0.493279 | 5.3:-9382735 | MS.gene047609:CDS |
| GCCAAAATATATTGTCTACC+AGG | 0.496928 | 5.3:-9379995 | MS.gene047609:CDS |
| CCTGTGCTCCTTTAAAGAAA+GGG | 0.498148 | 5.3:-9380625 | MS.gene047609:CDS |
| TCCCAGACACTATCACTTCA+CGG | 0.498199 | 5.3:+9379928 | None:intergenic |
| ACCGAAGAAAATATTGTCGT+TGG | 0.500600 | 5.3:-9380422 | MS.gene047609:CDS |
| CATTATGTTTAGTGTTGGAG+GGG | 0.505283 | 5.3:+9379611 | None:intergenic |
| TAGCAGGGTAATTCTCCTCT+GGG | 0.505672 | 5.3:+9381164 | None:intergenic |
| CAGCATTACTTGCCCAGCGG+CGG | 0.506707 | 5.3:+9379232 | None:intergenic |
| GATCAACACACTTCAAAGAA+TGG | 0.512393 | 5.3:-9379755 | MS.gene047609:CDS |
| GTGCAAAATTCGATTAAATG+AGG | 0.513828 | 5.3:-9379151 | MS.gene047609:CDS |
| CTCCAGGAATTGCAAAGACT+CGG | 0.514621 | 5.3:-9379085 | MS.gene047609:CDS |
| TCATTATGTTTAGTGTTGGA+GGG | 0.517970 | 5.3:+9379610 | None:intergenic |
| GGCGGCTAATTCTGGTGCTA+AGG | 0.522544 | 5.3:-9381589 | MS.gene047609:CDS |
| ATCACCAGAGTCTCTTTGGA+AGG | 0.522915 | 5.3:+9380188 | None:intergenic |
| CGAAAAGTCTTATCTCTAAG+TGG | 0.523031 | 5.3:+9381541 | None:intergenic |
| GAATTAGCCGCCTTTGGTAA+GGG | 0.525892 | 5.3:+9381600 | None:intergenic |
| GCACTGATTTCTGTTCTACA+TGG | 0.527594 | 5.3:+9378856 | None:intergenic |
| CAAGCCTTCCAAAGAGACTC+TGG | 0.527624 | 5.3:-9380192 | MS.gene047609:CDS |
| AGAAATTTCAGGAGTGTGAA+AGG | 0.528641 | 5.3:-9379881 | MS.gene047609:intron |
| TGCAAAATTCGATTAAATGA+GGG | 0.532824 | 5.3:-9379150 | MS.gene047609:CDS |
| CTGCTGGCGTGGTAATGCTA+TGG | 0.533073 | 5.3:-9380309 | MS.gene047609:CDS |
| TTTCCAAAACTTCAGCTCTA+CGG | 0.533760 | 5.3:+9378820 | None:intergenic |
| GTTATCTGTTGACAACCAAC+TGG | 0.534094 | 5.3:-9381959 | MS.gene047609:CDS |
| GATCATCATAGAGGAATACT+TGG | 0.534501 | 5.3:+9379495 | None:intergenic |
| AATGTAGAATACCACGCTGC+AGG | 0.540083 | 5.3:-9379062 | MS.gene047609:intron |
| TTATACTAACTTCTCACTCC+AGG | 0.540435 | 5.3:-9379101 | MS.gene047609:CDS |
| GAAAGCGATGGAGCAATCGT+TGG | 0.563087 | 5.3:-9378801 | MS.gene047609:CDS |
| TAGGATTGTGTAGATGGTAG+AGG | 0.563586 | 5.3:+9379473 | None:intergenic |
| CATGCAAGAGAGAGAAAACT+GGG | 0.565706 | 5.3:-9381511 | MS.gene047609:CDS |
| TTCCAAACAATCTACTCTCA+AGG | 0.576903 | 5.3:+9379581 | None:intergenic |
| AAATAGAACATTAAAGGACA+TGG | 0.581441 | 5.3:-9380222 | MS.gene047609:CDS |
| CAAACGAAAAGCTGTCACCT+TGG | 0.585482 | 5.3:+9380349 | None:intergenic |
| ACTGCTTCTTCACTGCCAGT+TGG | 0.587332 | 5.3:+9381944 | None:intergenic |
| GAACAGTTTGGATGAGAGCA+TGG | 0.587828 | 5.3:+9379207 | None:intergenic |
| CCAAAATATATTGTCTACCA+GGG | 0.588626 | 5.3:-9379994 | MS.gene047609:CDS |
| TGATAGTGTCTGGGAAGCGA+TGG | 0.590031 | 5.3:-9379920 | MS.gene047609:CDS |
| CATACTTTGAAGGAGACTGC+TGG | 0.595482 | 5.3:-9380325 | MS.gene047609:CDS |
| CTGTGCTCCTTTAAAGAAAG+GGG | 0.604650 | 5.3:-9380624 | MS.gene047609:CDS |
| TTTGAAGGAGACTGCTGGCG+TGG | 0.609917 | 5.3:-9380320 | MS.gene047609:CDS |
| AGAATGATAAGCTACGCCGC+TGG | 0.610740 | 5.3:-9380556 | MS.gene047609:intron |
| AATATTGCAAGTGAGCTATG+AGG | 0.614269 | 5.3:+9379964 | None:intergenic |
| CATGGTAAACGAAGGTACGA+AGG | 0.628852 | 5.3:+9380817 | None:intergenic |
| AATAGAACATTAAAGGACAT+GGG | 0.630593 | 5.3:-9380221 | MS.gene047609:CDS |
| GCATGTTCCCTTACCAAAGG+CGG | 0.630753 | 5.3:-9381607 | MS.gene047609:CDS |
| ATGGTAAACGAAGGTACGAA+GGG | 0.635264 | 5.3:+9380818 | None:intergenic |
| ATCTATAAGAGAATTTAGCA+GGG | 0.635382 | 5.3:+9381149 | None:intergenic |
| AATTCAATGGAAATTGACAT+CGG | 0.636320 | 5.3:-9382722 | MS.gene047609:CDS |
| CCTGAAAGAAGGACAAAGTG+TGG | 0.639771 | 5.3:-9380846 | MS.gene047609:CDS |
| GCCGTGAAGTGATAGTGTCT+GGG | 0.641094 | 5.3:-9379929 | MS.gene047609:CDS |
| AATGCATGTTCCCTTACCAA+AGG | 0.654704 | 5.3:-9381610 | MS.gene047609:CDS |
| GCTCAGCATTACTTGCCCAG+CGG | 0.661288 | 5.3:+9379229 | None:intergenic |
| CAATATCTCATGGTAAACGA+AGG | 0.666016 | 5.3:+9380809 | None:intergenic |
| AGGGAATGAGAATCTTGATG+AGG | 0.666581 | 5.3:-9381478 | MS.gene047609:intron |
| TAGAGGAATACTTGGCACGA+CGG | 0.668087 | 5.3:+9379503 | None:intergenic |
| ATCTATAAGAGAATTCAGCA+GGG | 0.671258 | 5.3:+9381893 | None:intergenic |
| GGAGGGGATATCATCAACAA+CGG | 0.699125 | 5.3:+9379627 | None:intergenic |
| ACACACTTCAAAGAATGGTG+AGG | 0.703040 | 5.3:-9379750 | MS.gene047609:CDS |
| ATGGTAGAGGATCATCATAG+AGG | 0.728159 | 5.3:+9379486 | None:intergenic |
| ATTGTAACACACCTGCAGCG+TGG | 0.738381 | 5.3:+9379051 | None:intergenic |
| GTTTCTGGACATCATCCCAG+AGG | 0.751856 | 5.3:-9381179 | MS.gene047609:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAACAAACAATATAAAAATA+AGG | + | chr5.3:9381055-9381074 | None:intergenic | 10.0% |
| !! | AATAATACTGATAAATAAAG+AGG | + | chr5.3:9379422-9379441 | None:intergenic | 15.0% |
| !! | CAAAATCAACATAATTATTA+AGG | + | chr5.3:9382637-9382656 | None:intergenic | 15.0% |
| !! | TTCATTTACTAAAGTATAAA+AGG | + | chr5.3:9381405-9381424 | None:intergenic | 15.0% |
| !!! | AACATCATTTATTTTATTTG+AGG | + | chr5.3:9378982-9379001 | None:intergenic | 15.0% |
| !!! | GAAAAGATCAATAATTTTAA+GGG | + | chr5.3:9380186-9380205 | None:intergenic | 15.0% |
| !!! | GTTCATTTTATTAGTTTTAT+TGG | + | chr5.3:9380774-9380793 | None:intergenic | 15.0% |
| !!! | TTCTTTTTAAATAACATACT+AGG | + | chr5.3:9379463-9379482 | None:intergenic | 15.0% |
| !! | AATATCATTATGTTTAGTGT+TGG | + | chr5.3:9381925-9381944 | None:intergenic | 20.0% |
| !! | ATGTATTTAAAAACACATGA+AGG | + | chr5.3:9379092-9379111 | None:intergenic | 20.0% |
| !! | CAAATCAATATATATTTCGA+AGG | + | chr5.3:9380208-9380227 | None:intergenic | 20.0% |
| !! | TTAAATACATTGATCTGTTT+AGG | - | chr5.3:9379102-9379121 | MS.gene047609:CDS | 20.0% |
| !! | TTTAAATAACATACTAGGAA+GGG | + | chr5.3:9379458-9379477 | None:intergenic | 20.0% |
| !! | TTTATATTGTTTGTTTATGC+AGG | - | chr5.3:9381059-9381078 | MS.gene047609:intron | 20.0% |
| !!! | AACAGAGTCATTTTTTTTTT+TGG | - | chr5.3:9382591-9382610 | MS.gene047609:intron | 20.0% |
| !!! | AACTTAAACTAGTCTATAAT+AGG | + | chr5.3:9381441-9381460 | None:intergenic | 20.0% |
| !!! | AGCATTGAATGAAATAAAAA+GGG | - | chr5.3:9381703-9381722 | MS.gene047609:CDS | 20.0% |
| !!! | ATTTATTTTATTTGAGGATG+TGG | + | chr5.3:9378976-9378995 | None:intergenic | 20.0% |
| !!! | GGAAAAGATCAATAATTTTA+AGG | + | chr5.3:9380187-9380206 | None:intergenic | 20.0% |
| !!! | TAGCATTGAATGAAATAAAA+AGG | - | chr5.3:9381702-9381721 | MS.gene047609:CDS | 20.0% |
| !!! | TTCCATTTTCAATTTCTTTT+TGG | + | chr5.3:9379900-9379919 | None:intergenic | 20.0% |
| !!! | TTTATTTCTTATCATCAGAT+TGG | - | chr5.3:9380830-9380849 | MS.gene047609:CDS | 20.0% |
| !!! | TTTTAAATAACATACTAGGA+AGG | + | chr5.3:9379459-9379478 | None:intergenic | 20.0% |
| ! | AAAGAAATGGTCATATATGT+TGG | + | chr5.3:9381137-9381156 | None:intergenic | 25.0% |
| ! | AAATAGAACATTAAAGGACA+TGG | - | chr5.3:9381306-9381325 | MS.gene047609:intron | 25.0% |
| ! | AATAGAACATTAAAGGACAT+GGG | - | chr5.3:9381307-9381326 | MS.gene047609:intron | 25.0% |
| ! | AATTCAATGGAAATTGACAT+CGG | - | chr5.3:9378806-9378825 | MS.gene047609:CDS | 25.0% |
| ! | AATTCATGTTTGTAAGCATT+TGG | - | chr5.3:9379164-9379183 | MS.gene047609:CDS | 25.0% |
| ! | AGAAAAATACCAATATCTCA+TGG | + | chr5.3:9380732-9380751 | None:intergenic | 25.0% |
| ! | AGTGTCAAATAGAACATTAA+AGG | - | chr5.3:9381300-9381319 | MS.gene047609:intron | 25.0% |
| ! | ATAGAATATCGAAATTCTCT+AGG | + | chr5.3:9382518-9382537 | None:intergenic | 25.0% |
| ! | ATCTATAAGAGAATTTAGCA+GGG | + | chr5.3:9380382-9380401 | None:intergenic | 25.0% |
| ! | CACCAAAAAGAAATTGAAAA+TGG | - | chr5.3:9379895-9379914 | MS.gene047609:CDS | 25.0% |
| ! | CATATGAAATGAAAAACTTC+AGG | + | chr5.3:9381834-9381853 | None:intergenic | 25.0% |
| ! | GAGAACTTCTATTAAATGTT+CGG | + | chr5.3:9380510-9380529 | None:intergenic | 25.0% |
| ! | GTGGTTTATCAATGAATAAA+TGG | - | chr5.3:9380416-9380435 | MS.gene047609:CDS | 25.0% |
| ! | TAAAGCATAAAAAGAGAGAA+TGG | + | chr5.3:9380808-9380827 | None:intergenic | 25.0% |
| ! | TAAATAAAGAGGACTGTTTA+CGG | + | chr5.3:9379411-9379430 | None:intergenic | 25.0% |
| ! | TATAAAAGGATATATCCCAT+TGG | + | chr5.3:9381391-9381410 | None:intergenic | 25.0% |
| ! | TATTTAAAAACACATGAAGG+TGG | + | chr5.3:9379089-9379108 | None:intergenic | 25.0% |
| ! | TGCAAAATTCGATTAAATGA+GGG | - | chr5.3:9382378-9382397 | MS.gene047609:intron | 25.0% |
| ! | TTTCAGACTTCAAATATGTT+CGG | + | chr5.3:9379042-9379061 | None:intergenic | 25.0% |
| !! | AAATGAAAAACTTCAGGTTT+AGG | + | chr5.3:9381828-9381847 | None:intergenic | 25.0% |
| !! | AAGCATTTGGTTTATAACAT+AGG | - | chr5.3:9379210-9379229 | MS.gene047609:CDS | 25.0% |
| !! | ACCTTGATTTTTGTAACAAA+AGG | - | chr5.3:9380855-9380874 | MS.gene047609:intron | 25.0% |
| !! | CATTTTCAATTTCTTTTTGG+TGG | + | chr5.3:9379897-9379916 | None:intergenic | 25.0% |
| !! | CCTTGATTTTTGTAACAAAA+GGG | - | chr5.3:9380856-9380875 | MS.gene047609:intron | 25.0% |
| !! | CTTGATTTTTGTAACAAAAG+GGG | - | chr5.3:9380857-9380876 | MS.gene047609:intron | 25.0% |
| !! | TATAATTGTGTAACGTTTTC+AGG | - | chr5.3:9381878-9381897 | MS.gene047609:intron | 25.0% |
| !!! | TCAATAATTTTAAGGGAACA+TGG | + | chr5.3:9380179-9380198 | None:intergenic | 25.0% |
| !!! | TTTCTTAACTTGCTACATAT+GGG | - | chr5.3:9380880-9380899 | MS.gene047609:intron | 25.0% |
| AAAACAGTGCAACTTGTATA+TGG | + | chr5.3:9379271-9379290 | None:intergenic | 30.0% | |
| AAAACTGGGAAAAAGTTGAA+GGG | - | chr5.3:9380031-9380050 | MS.gene047609:intron | 30.0% | |
| AATAGAGTAGACATCAAACT+TGG | + | chr5.3:9379692-9379711 | None:intergenic | 30.0% | |
| AATCTATAAGAGAATTCAGC+AGG | + | chr5.3:9379639-9379658 | None:intergenic | 30.0% | |
| AGAGTAGATTGTTTGGAAAT+AGG | - | chr5.3:9381952-9381971 | MS.gene047609:CDS | 30.0% | |
| ATAGAAGTTCTCTTGATTTC+AGG | - | chr5.3:9380518-9380537 | MS.gene047609:intron | 30.0% | |
| ATCTATAAGAGAATTCAGCA+GGG | + | chr5.3:9379638-9379657 | None:intergenic | 30.0% | |
| ATGTTCGGTTATTTGATCAT+GGG | + | chr5.3:9379027-9379046 | None:intergenic | 30.0% | |
| ATTCATGTTGTCTAAGCATT+TGG | - | chr5.3:9379197-9379216 | MS.gene047609:CDS | 30.0% | |
| CCAAAATATATTGTCTACCA+GGG | - | chr5.3:9381534-9381553 | MS.gene047609:CDS | 30.0% | |
| CGGACTGATAGTTATATAAA+AGG | + | chr5.3:9379373-9379392 | None:intergenic | 30.0% | |
| GAGTAGATTGTTTGGAAATA+GGG | - | chr5.3:9381953-9381972 | MS.gene047609:CDS | 30.0% | |
| GATCTATAAGAGAATTTAGC+AGG | + | chr5.3:9380383-9380402 | None:intergenic | 30.0% | |
| GTGCAAAATTCGATTAAATG+AGG | - | chr5.3:9382377-9382396 | MS.gene047609:intron | 30.0% | |
| TAATCATCCCCTTTCTTTAA+AGG | + | chr5.3:9380914-9380933 | None:intergenic | 30.0% | |
| TATGTTCGGTTATTTGATCA+TGG | + | chr5.3:9379028-9379047 | None:intergenic | 30.0% | |
| TCTTTCTTCCTACTGAAAAA+GGG | - | chr5.3:9381152-9381171 | MS.gene047609:CDS | 30.0% | |
| TTCTTTCTTCCTACTGAAAA+AGG | - | chr5.3:9381151-9381170 | MS.gene047609:CDS | 30.0% | |
| TTTCAGTAGGAAGAAAGAAA+TGG | + | chr5.3:9381150-9381169 | None:intergenic | 30.0% | |
| ! | AAGTGTGTTGATCATAACTA+TGG | + | chr5.3:9381766-9381785 | None:intergenic | 30.0% |
| ! | ACCAACGACAATATTTTCTT+CGG | + | chr5.3:9381110-9381129 | None:intergenic | 30.0% |
| ! | ACCATATCTTTTTACAATGC+TGG | + | chr5.3:9382407-9382426 | None:intergenic | 30.0% |
| ! | ATCATTATGTTTAGTGTTGG+AGG | + | chr5.3:9381922-9381941 | None:intergenic | 30.0% |
| ! | CCCTTTTGTTACAAAAATCA+AGG | + | chr5.3:9380859-9380878 | None:intergenic | 30.0% |
| ! | TAATCGAATTTTGCACTTAC+TGG | + | chr5.3:9382373-9382392 | None:intergenic | 30.0% |
| ! | TATGATCAACAATCTAGCTT+AGG | + | chr5.3:9382216-9382235 | None:intergenic | 30.0% |
| ! | TCATTATGTTTAGTGTTGGA+GGG | + | chr5.3:9381921-9381940 | None:intergenic | 30.0% |
| ! | TTCTTGATTTGAGAACAGTT+TGG | + | chr5.3:9382336-9382355 | None:intergenic | 30.0% |
| ! | TTGATTCCGTCAAGTATTTT+AGG | - | chr5.3:9380659-9380678 | MS.gene047609:CDS | 30.0% |
| ! | TTTTTAACAGAGTTCAACTG+CGG | - | chr5.3:9379290-9379309 | MS.gene047609:intron | 30.0% |
| !! | GTTTCTTAACTTGCTACATA+TGG | - | chr5.3:9380879-9380898 | MS.gene047609:intron | 30.0% |
| !!! | ATGACTGTTTTTTCTTCTAG+TGG | - | chr5.3:9379779-9379798 | MS.gene047609:intron | 30.0% |
| !!! | TGACTGTTTTTTCTTCTAGT+GGG | - | chr5.3:9379780-9379799 | MS.gene047609:intron | 30.0% |
| !!! | TTGAACAGTTTTGAGTTAAC+TGG | + | chr5.3:9382103-9382122 | None:intergenic | 30.0% |
| AAGTTAGGGGGAAAAAGAAA+AGG | + | chr5.3:9381502-9381521 | None:intergenic | 35.0% | |
| AATATTGCAAGTGAGCTATG+AGG | + | chr5.3:9381567-9381586 | None:intergenic | 35.0% | |
| ACATTGATCTGTTTAGGCAT+TGG | - | chr5.3:9379108-9379127 | MS.gene047609:CDS | 35.0% | |
| ACCGAAGAAAATATTGTCGT+TGG | - | chr5.3:9381106-9381125 | MS.gene047609:intron | 35.0% | |
| AGTATGTCAATCTGAGAATC+AGG | - | chr5.3:9382127-9382146 | MS.gene047609:intron | 35.0% | |
| ATGTCTATCTTGTCATCCAA+TGG | - | chr5.3:9381372-9381391 | MS.gene047609:intron | 35.0% | |
| CAATATCTCATGGTAAACGA+AGG | + | chr5.3:9380722-9380741 | None:intergenic | 35.0% | |
| CACTGAATGCAAGAAATTTC+AGG | - | chr5.3:9381636-9381655 | MS.gene047609:CDS | 35.0% | |
| CTTCGTTTACCATGAGATAT+TGG | - | chr5.3:9380720-9380739 | MS.gene047609:intron | 35.0% | |
| CTTCTGTTTAAGCTGATTGA+AGG | - | chr5.3:9380546-9380565 | MS.gene047609:intron | 35.0% | |
| GAAAACTGGGAAAAAGTTGA+AGG | - | chr5.3:9380030-9380049 | MS.gene047609:intron | 35.0% | |
| GAAAGTGAATAAGCAGTTTC+TGG | - | chr5.3:9380334-9380353 | MS.gene047609:CDS | 35.0% | |
| GATCAACACACTTCAAAGAA+TGG | - | chr5.3:9381773-9381792 | MS.gene047609:intron | 35.0% | |
| GATCATCATAGAGGAATACT+TGG | + | chr5.3:9382036-9382055 | None:intergenic | 35.0% | |
| GCCAAAATATATTGTCTACC+AGG | - | chr5.3:9381533-9381552 | MS.gene047609:CDS | 35.0% | |
| GCCAGCATTGTAAAAAGATA+TGG | - | chr5.3:9382403-9382422 | MS.gene047609:intron | 35.0% | |
| TAGATCAAGAGTAAGTTCAG+TGG | - | chr5.3:9380397-9380416 | MS.gene047609:CDS | 35.0% | |
| TCAGGAGTCAAATGAAGAAA+TGG | - | chr5.3:9382145-9382164 | MS.gene047609:intron | 35.0% | |
| TCCAATTCCTATTGATGTAG+AGG | - | chr5.3:9378865-9378884 | MS.gene047609:CDS | 35.0% | |
| TCCTCTACATCAATAGGAAT+TGG | + | chr5.3:9378869-9378888 | None:intergenic | 35.0% | |
| TCGAATTACTGCAAAATTGC+AGG | - | chr5.3:9380256-9380275 | MS.gene047609:CDS | 35.0% | |
| TGTCTATCTTGTCATCCAAT+GGG | - | chr5.3:9381373-9381392 | MS.gene047609:intron | 35.0% | |
| TGTTTGTCCTCTACATCAAT+AGG | + | chr5.3:9378875-9378894 | None:intergenic | 35.0% | |
| TTATACTAACTTCTCACTCC+AGG | - | chr5.3:9382427-9382446 | MS.gene047609:intron | 35.0% | |
| TTCAGGCCTAAAATACTTGA+CGG | + | chr5.3:9380668-9380687 | None:intergenic | 35.0% | |
| TTCCAAACAATCTACTCTCA+AGG | + | chr5.3:9381950-9381969 | None:intergenic | 35.0% | |
| TTTCCAAAACTTCAGCTCTA+CGG | + | chr5.3:9382711-9382730 | None:intergenic | 35.0% | |
| TTTCGTTTGCCATACTTTGA+AGG | - | chr5.3:9381193-9381212 | MS.gene047609:CDS | 35.0% | |
| ! | AGAAATTTCAGGAGTGTGAA+AGG | - | chr5.3:9381647-9381666 | MS.gene047609:CDS | 35.0% |
| ! | CATTATGTTTAGTGTTGGAG+GGG | + | chr5.3:9381920-9381939 | None:intergenic | 35.0% |
| ! | CCCTGGTAGACAATATATTT+TGG | + | chr5.3:9381537-9381556 | None:intergenic | 35.0% |
| ! | CGAAAAGTCTTATCTCTAAG+TGG | + | chr5.3:9379990-9380009 | None:intergenic | 35.0% |
| ! | TTTAGTTCAGAAGAAGCAAC+TGG | + | chr5.3:9380450-9380469 | None:intergenic | 35.0% |
| ! | TTTTAACAGAGTTCAACTGC+GGG | - | chr5.3:9379291-9379310 | MS.gene047609:intron | 35.0% |
| ! | TTTTCCCCCTAACTTCTATT+AGG | - | chr5.3:9381507-9381526 | MS.gene047609:CDS | 35.0% |
| !! | AGTATTTTAGGCCTGAAAGA+AGG | - | chr5.3:9380671-9380690 | MS.gene047609:CDS | 35.0% |
| !! | CTTATTGACTTACACACAGA+TGG | - | chr5.3:9382236-9382255 | MS.gene047609:intron | 35.0% |
| !! | TAATTTTAAGGGAACATGGC+AGG | + | chr5.3:9380175-9380194 | None:intergenic | 35.0% |
| !! | TCATTTTGAGTCATCGCATT+AGG | + | chr5.3:9382077-9382096 | None:intergenic | 35.0% |
| !!! | CATTTTTGGAATGTACGTCT+AGG | - | chr5.3:9380581-9380600 | MS.gene047609:CDS | 35.0% |
| !!! | GACTGTTTTTTCTTCTAGTG+GGG | - | chr5.3:9379781-9379800 | MS.gene047609:intron | 35.0% |
| !!! | TGCTTCTGTTGATTAGCTTT+TGG | + | chr5.3:9378951-9378970 | None:intergenic | 35.0% |
| AATGCATGTTCCCTTACCAA+AGG | - | chr5.3:9379918-9379937 | MS.gene047609:CDS | 40.0% | |
| ACACACTTCAAAGAATGGTG+AGG | - | chr5.3:9381778-9381797 | MS.gene047609:intron | 40.0% | |
| AGAAACAATAGACTGACCAG+CGG | + | chr5.3:9380991-9381010 | None:intergenic | 40.0% | |
| AGACGGAATTTGATTCAACC+AGG | - | chr5.3:9378895-9378914 | MS.gene047609:intron | 40.0% | |
| AGGGAATGAGAATCTTGATG+AGG | - | chr5.3:9380050-9380069 | MS.gene047609:intron | 40.0% | |
| ATGCATGACTCCAAAACTGT+AGG | - | chr5.3:9379512-9379531 | MS.gene047609:CDS | 40.0% | |
| ATGGGTGGACAAATCAATCA+AGG | + | chr5.3:9379009-9379028 | None:intergenic | 40.0% | |
| ATGGTAGAGGATCATCATAG+AGG | + | chr5.3:9382045-9382064 | None:intergenic | 40.0% | |
| CAAACTGAAACTGAGACTTC+TGG | + | chr5.3:9381998-9382017 | None:intergenic | 40.0% | |
| CATCAATAGGAATTGGAAGC+TGG | + | chr5.3:9378862-9378881 | None:intergenic | 40.0% | |
| CATGCAAGAGAGAGAAAACT+GGG | - | chr5.3:9380017-9380036 | MS.gene047609:intron | 40.0% | |
| CCAACCTAATAGAAGTTAGG+GGG | + | chr5.3:9381514-9381533 | None:intergenic | 40.0% | |
| GAATTTGATTCAACCAGGAG+GGG | - | chr5.3:9378900-9378919 | MS.gene047609:intron | 40.0% | |
| GATGTAGAGGACAAACAAGA+CGG | - | chr5.3:9378878-9378897 | MS.gene047609:intron | 40.0% | |
| GCCAACCTAATAGAAGTTAG+GGG | + | chr5.3:9381515-9381534 | None:intergenic | 40.0% | |
| GGAATTTGATTCAACCAGGA+GGG | - | chr5.3:9378899-9378918 | MS.gene047609:intron | 40.0% | |
| GGCCAACCTAATAGAAGTTA+GGG | + | chr5.3:9381516-9381535 | None:intergenic | 40.0% | |
| GTCCTTGAGAGTAGATTGTT+TGG | - | chr5.3:9381945-9381964 | MS.gene047609:CDS | 40.0% | |
| GTTATCTGTTGACAACCAAC+TGG | - | chr5.3:9379569-9379588 | MS.gene047609:CDS | 40.0% | |
| TACGGCAGACTACTATTGAT+CGG | + | chr5.3:9379393-9379412 | None:intergenic | 40.0% | |
| TACTGAAAAAGGGAACTCCA+AGG | - | chr5.3:9381162-9381181 | MS.gene047609:CDS | 40.0% | |
| TAGGATTGTGTAGATGGTAG+AGG | + | chr5.3:9382058-9382077 | None:intergenic | 40.0% | |
| TCATGCAAGAGAGAGAAAAC+TGG | - | chr5.3:9380016-9380035 | MS.gene047609:intron | 40.0% | |
| TCGCATTAGGATTGTGTAGA+TGG | + | chr5.3:9382064-9382083 | None:intergenic | 40.0% | |
| TCTGAAAAAGCAATCCGTTC+AGG | - | chr5.3:9379055-9379074 | MS.gene047609:intron | 40.0% | |
| TGGCCAACCTAATAGAAGTT+AGG | + | chr5.3:9381517-9381536 | None:intergenic | 40.0% | |
| TTCGGTTATTTGATCATGGG+TGG | + | chr5.3:9379024-9379043 | None:intergenic | 40.0% | |
| ! | ATGGTAAACGAAGGTACGAA+GGG | + | chr5.3:9380713-9380732 | None:intergenic | 40.0% |
| ! | CCTGTGCTCCTTTAAAGAAA+GGG | - | chr5.3:9380903-9380922 | MS.gene047609:intron | 40.0% |
| ! | CTGTGCTCCTTTAAAGAAAG+GGG | - | chr5.3:9380904-9380923 | MS.gene047609:intron | 40.0% |
| ! | GCAACTACAACCTACAGTTT+TGG | + | chr5.3:9379525-9379544 | None:intergenic | 40.0% |
| ! | GGAGCAGATGTATGCATTTT+TGG | - | chr5.3:9380567-9380586 | MS.gene047609:CDS | 40.0% |
| !! | ATGTATACACAAGCGCTGAT+TGG | + | chr5.3:9380631-9380650 | None:intergenic | 40.0% |
| !! | GCAAAATTGCAGGTTTTAGC+AGG | - | chr5.3:9380266-9380285 | MS.gene047609:CDS | 40.0% |
| !! | GCACTGATTTCTGTTCTACA+TGG | + | chr5.3:9382675-9382694 | None:intergenic | 40.0% |
| !! | TGTATACACAAGCGCTGATT+GGG | + | chr5.3:9380630-9380649 | None:intergenic | 40.0% |
| !!! | TTGGAGTTCCCTTTTTCAGT+AGG | + | chr5.3:9381163-9381182 | None:intergenic | 40.0% |
| AATGTAGAATACCACGCTGC+AGG | - | chr5.3:9382466-9382485 | MS.gene047609:intron | 45.0% | |
| AGAATTAGCCGCCTTTGGTA+AGG | + | chr5.3:9379932-9379951 | None:intergenic | 45.0% | |
| AGCCAAGACCTTCGAAAAAG+AGG | - | chr5.3:9381246-9381265 | MS.gene047609:CDS | 45.0% | |
| AGGTGGTGTACTAACCTGAA+CGG | + | chr5.3:9379072-9379091 | None:intergenic | 45.0% | |
| AGTGGGGTGAATGCAATAGA+TGG | - | chr5.3:9379797-9379816 | MS.gene047609:intron | 45.0% | |
| AGTTCAGAAGAAGCAACTGG+TGG | + | chr5.3:9380447-9380466 | None:intergenic | 45.0% | |
| ATCACCAGAGTCTCTTTGGA+AGG | + | chr5.3:9381343-9381362 | None:intergenic | 45.0% | |
| CAAACGAAAAGCTGTCACCT+TGG | + | chr5.3:9381182-9381201 | None:intergenic | 45.0% | |
| CAGCAGTCTCCTTCAAAGTA+TGG | + | chr5.3:9381205-9381224 | None:intergenic | 45.0% | |
| CCACACTTTGTCCTTCTTTC+AGG | + | chr5.3:9380685-9380704 | None:intergenic | 45.0% | |
| CCCCCTAACTTCTATTAGGT+TGG | - | chr5.3:9381511-9381530 | MS.gene047609:CDS | 45.0% | |
| CCTGAAAGAAGGACAAAGTG+TGG | - | chr5.3:9380682-9380701 | MS.gene047609:CDS | 45.0% | |
| CGGAATTTGATTCAACCAGG+AGG | - | chr5.3:9378898-9378917 | MS.gene047609:intron | 45.0% | |
| CGGCGTAGCTTATCATTCTT+CGG | + | chr5.3:9380971-9380990 | None:intergenic | 45.0% | |
| CTCCAGGAATTGCAAAGACT+CGG | - | chr5.3:9382443-9382462 | MS.gene047609:intron | 45.0% | |
| GAACAGTTTGGATGAGAGCA+TGG | + | chr5.3:9382324-9382343 | None:intergenic | 45.0% | |
| GAATTAGCCGCCTTTGGTAA+GGG | + | chr5.3:9379931-9379950 | None:intergenic | 45.0% | |
| GCCAAGACCTTCGAAAAAGA+GGG | - | chr5.3:9381247-9381266 | MS.gene047609:CDS | 45.0% | |
| GGAGGGGATATCATCAACAA+CGG | + | chr5.3:9381904-9381923 | None:intergenic | 45.0% | |
| TAGAGGAATACTTGGCACGA+CGG | + | chr5.3:9382028-9382047 | None:intergenic | 45.0% | |
| TAGCAGGGTAATTCTCCTCT+GGG | + | chr5.3:9380367-9380386 | None:intergenic | 45.0% | |
| TCAGCAGGGTAATTCTCATC+TGG | + | chr5.3:9379624-9379643 | None:intergenic | 45.0% | |
| TCCCAGACACTATCACTTCA+CGG | + | chr5.3:9381603-9381622 | None:intergenic | 45.0% | |
| TGAGGTGCATACACTTTGTC+AGG | - | chr5.3:9381796-9381815 | MS.gene047609:intron | 45.0% | |
| TGGTCACTTAGCACTGTTCT+TGG | + | chr5.3:9379970-9379989 | None:intergenic | 45.0% | |
| TTACCAAAGGCGGCTAATTC+TGG | - | chr5.3:9379931-9379950 | MS.gene047609:CDS | 45.0% | |
| TTAGCAGGGTAATTCTCCTC+TGG | + | chr5.3:9380368-9380387 | None:intergenic | 45.0% | |
| TTCCGAGTCTTTGCAATTCC+TGG | + | chr5.3:9382448-9382467 | None:intergenic | 45.0% | |
| TTGCATCACCAGAGTCTCTT+TGG | + | chr5.3:9381347-9381366 | None:intergenic | 45.0% | |
| ! | AATTGGAAGCTGGCTTACGA+GGG | + | chr5.3:9378852-9378871 | None:intergenic | 45.0% |
| ! | AGCTATGAGGAAGTTTTCCC+TGG | + | chr5.3:9381554-9381573 | None:intergenic | 45.0% |
| ! | CATACTTTGAAGGAGACTGC+TGG | - | chr5.3:9381203-9381222 | MS.gene047609:CDS | 45.0% |
| ! | CATGGTAAACGAAGGTACGA+AGG | + | chr5.3:9380714-9380733 | None:intergenic | 45.0% |
| ! | CCCTTTCTTTAAAGGAGCAC+AGG | + | chr5.3:9380906-9380925 | None:intergenic | 45.0% |
| ! | CTTCGGAGTCTTTTGCTCTT+CGG | + | chr5.3:9380954-9380973 | None:intergenic | 45.0% |
| ! | GCCTGTGCTCCTTTAAAGAA+AGG | - | chr5.3:9380902-9380921 | MS.gene047609:intron | 45.0% |
| ! | TTCGGAGTCTTTTGCTCTTC+GGG | + | chr5.3:9380953-9380972 | None:intergenic | 45.0% |
| ! | TTGCCGTAGAGCTGAAGTTT+TGG | - | chr5.3:9382705-9382724 | MS.gene047609:CDS | 45.0% |
| !!! | ACCCTCTTTTTCGAAGGTCT+TGG | + | chr5.3:9381251-9381270 | None:intergenic | 45.0% |
| !!! | GCTGAAGTTTTGGAAAGCGA+TGG | - | chr5.3:9382715-9382734 | MS.gene047609:CDS | 45.0% |
| ACTGCTTCTTCACTGCCAGT+TGG | + | chr5.3:9379587-9379606 | None:intergenic | 50.0% | |
| AGAATGATAAGCTACGCCGC+TGG | - | chr5.3:9380972-9380991 | MS.gene047609:CDS | 50.0% | |
| ATTGTAACACACCTGCAGCG+TGG | + | chr5.3:9382480-9382499 | None:intergenic | 50.0% | |
| CAAGCCTTCCAAAGAGACTC+TGG | - | chr5.3:9381336-9381355 | MS.gene047609:intron | 50.0% | |
| GAAAGCGATGGAGCAATCGT+TGG | - | chr5.3:9382727-9382746 | MS.gene047609:CDS | 50.0% | |
| GCATGTTCCCTTACCAAAGG+CGG | - | chr5.3:9379921-9379940 | MS.gene047609:CDS | 50.0% | |
| GGCAGTGAAGAAGCAGTTTC+TGG | - | chr5.3:9379590-9379609 | MS.gene047609:CDS | 50.0% | |
| ! | ACCTTCGAAAAAGAGGGTGC+AGG | - | chr5.3:9381253-9381272 | MS.gene047609:CDS | 50.0% |
| ! | CAGAGTCTCTTTGGAAGGCT+TGG | + | chr5.3:9381338-9381357 | None:intergenic | 50.0% |
| ! | GAATTGGAAGCTGGCTTACG+AGG | + | chr5.3:9378853-9378872 | None:intergenic | 50.0% |
| ! | GAGTCTTTTGCTCTTCGGGA+TGG | + | chr5.3:9380949-9380968 | None:intergenic | 50.0% |
| ! | GCCGTGAAGTGATAGTGTCT+GGG | - | chr5.3:9381599-9381618 | MS.gene047609:CDS | 50.0% |
| ! | GTTTCTGGACATCATCCCAG+AGG | - | chr5.3:9380349-9380368 | MS.gene047609:CDS | 50.0% |
| ! | TGATAGTGTCTGGGAAGCGA+TGG | - | chr5.3:9381608-9381627 | MS.gene047609:CDS | 50.0% |
| ! | TGCCGTGAAGTGATAGTGTC+TGG | - | chr5.3:9381598-9381617 | MS.gene047609:CDS | 50.0% |
| !!! | TCCTGCACCCTCTTTTTCGA+AGG | + | chr5.3:9381257-9381276 | None:intergenic | 50.0% |
| CTTGAGAATCTGTCCCCTCC+TGG | + | chr5.3:9378916-9378935 | None:intergenic | 55.0% | |
| GCACCAGAATTAGCCGCCTT+TGG | + | chr5.3:9379937-9379956 | None:intergenic | 55.0% | |
| GCTCAGCATTACTTGCCCAG+CGG | + | chr5.3:9382302-9382321 | None:intergenic | 55.0% | |
| TTTGAAGGAGACTGCTGGCG+TGG | - | chr5.3:9381208-9381227 | MS.gene047609:CDS | 55.0% | |
| ! | CTGCTGGCGTGGTAATGCTA+TGG | - | chr5.3:9381219-9381238 | MS.gene047609:CDS | 55.0% |
| ! | GGCGGCTAATTCTGGTGCTA+AGG | - | chr5.3:9379939-9379958 | MS.gene047609:CDS | 55.0% |
| ATGCATCTCAATGCCGCCGC+TGG | - | chr5.3:9382283-9382302 | MS.gene047609:intron | 60.0% | |
| CAGCATTACTTGCCCAGCGG+CGG | + | chr5.3:9382299-9382318 | None:intergenic | 60.0% | |
| TGCATCTCAATGCCGCCGCT+GGG | - | chr5.3:9382284-9382303 | MS.gene047609:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 9378794 | 9382756 | 9378794 | ID=MS.gene047609 |
| chr5.3 | mRNA | 9378794 | 9382756 | 9378794 | ID=MS.gene047609.t1;Parent=MS.gene047609 |
| chr5.3 | exon | 9382697 | 9382756 | 9382697 | ID=MS.gene047609.t1.exon1;Parent=MS.gene047609.t1 |
| chr5.3 | CDS | 9382697 | 9382756 | 9382697 | ID=cds.MS.gene047609.t1;Parent=MS.gene047609.t1 |
| chr5.3 | exon | 9381888 | 9382016 | 9381888 | ID=MS.gene047609.t1.exon2;Parent=MS.gene047609.t1 |
| chr5.3 | CDS | 9381888 | 9382016 | 9381888 | ID=cds.MS.gene047609.t1;Parent=MS.gene047609.t1 |
| chr5.3 | exon | 9381479 | 9381751 | 9381479 | ID=MS.gene047609.t1.exon3;Parent=MS.gene047609.t1 |
| chr5.3 | CDS | 9381479 | 9381751 | 9381479 | ID=cds.MS.gene047609.t1;Parent=MS.gene047609.t1 |
| chr5.3 | exon | 9381144 | 9381272 | 9381144 | ID=MS.gene047609.t1.exon4;Parent=MS.gene047609.t1 |
| chr5.3 | CDS | 9381144 | 9381272 | 9381144 | ID=cds.MS.gene047609.t1;Parent=MS.gene047609.t1 |
| chr5.3 | exon | 9380958 | 9381010 | 9380958 | ID=MS.gene047609.t1.exon5;Parent=MS.gene047609.t1 |
| chr5.3 | CDS | 9380958 | 9381010 | 9380958 | ID=cds.MS.gene047609.t1;Parent=MS.gene047609.t1 |
| chr5.3 | exon | 9380809 | 9380869 | 9380809 | ID=MS.gene047609.t1.exon6;Parent=MS.gene047609.t1 |
| chr5.3 | CDS | 9380809 | 9380869 | 9380809 | ID=cds.MS.gene047609.t1;Parent=MS.gene047609.t1 |
| chr5.3 | exon | 9380557 | 9380702 | 9380557 | ID=MS.gene047609.t1.exon7;Parent=MS.gene047609.t1 |
| chr5.3 | CDS | 9380557 | 9380702 | 9380557 | ID=cds.MS.gene047609.t1;Parent=MS.gene047609.t1 |
| chr5.3 | exon | 9380181 | 9380469 | 9380181 | ID=MS.gene047609.t1.exon8;Parent=MS.gene047609.t1 |
| chr5.3 | CDS | 9380181 | 9380469 | 9380181 | ID=cds.MS.gene047609.t1;Parent=MS.gene047609.t1 |
| chr5.3 | exon | 9379882 | 9380021 | 9379882 | ID=MS.gene047609.t1.exon9;Parent=MS.gene047609.t1 |
| chr5.3 | CDS | 9379882 | 9380021 | 9379882 | ID=cds.MS.gene047609.t1;Parent=MS.gene047609.t1 |
| chr5.3 | exon | 9379733 | 9379790 | 9379733 | ID=MS.gene047609.t1.exon10;Parent=MS.gene047609.t1 |
| chr5.3 | CDS | 9379733 | 9379790 | 9379733 | ID=cds.MS.gene047609.t1;Parent=MS.gene047609.t1 |
| chr5.3 | exon | 9379384 | 9379650 | 9379384 | ID=MS.gene047609.t1.exon11;Parent=MS.gene047609.t1 |
| chr5.3 | CDS | 9379384 | 9379650 | 9379384 | ID=cds.MS.gene047609.t1;Parent=MS.gene047609.t1 |
| chr5.3 | exon | 9379063 | 9379295 | 9379063 | ID=MS.gene047609.t1.exon12;Parent=MS.gene047609.t1 |
| chr5.3 | CDS | 9379063 | 9379295 | 9379063 | ID=cds.MS.gene047609.t1;Parent=MS.gene047609.t1 |
| chr5.3 | exon | 9378794 | 9378890 | 9378794 | ID=MS.gene047609.t1.exon13;Parent=MS.gene047609.t1 |
| chr5.3 | CDS | 9378794 | 9378890 | 9378794 | ID=cds.MS.gene047609.t1;Parent=MS.gene047609.t1 |
| Gene Sequence |
| Protein sequence |
