Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene047642.t1 | XP_003611755.1 | 82.2 | 247 | 26 | 2 | 1 | 247 | 1 | 229 | 6.10E-104 | 387.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene047642.t1 | G7K6Q6 | 82.2 | 247 | 26 | 2 | 1 | 247 | 1 | 229 | 4.4e-104 | 387.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene047642.t1 | TF | Trihelix |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene047642.t1 | MTR_5g017500 | 85.830 | 247 | 17 | 2 | 1 | 247 | 1 | 229 | 5.61e-148 | 412 |
MS.gene047642.t1 | MTR_4g117990 | 45.872 | 109 | 57 | 1 | 14 | 122 | 36 | 142 | 3.94e-27 | 107 |
MS.gene047642.t1 | MTR_7g081190 | 49.020 | 102 | 49 | 2 | 19 | 118 | 43 | 143 | 9.70e-22 | 93.2 |
MS.gene047642.t1 | MTR_1g061600 | 31.111 | 135 | 74 | 4 | 22 | 143 | 133 | 261 | 1.43e-15 | 75.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene047642.t1 | AT3G24860 | 34.572 | 269 | 130 | 7 | 11 | 246 | 54 | 309 | 7.31e-44 | 150 |
MS.gene047642.t1 | AT2G44730 | 44.348 | 115 | 54 | 2 | 9 | 119 | 51 | 159 | 1.25e-22 | 95.5 |
MS.gene047642.t1 | AT3G10030 | 35.644 | 101 | 59 | 2 | 22 | 122 | 161 | 255 | 9.68e-15 | 73.6 |
MS.gene047642.t1 | AT3G10030 | 35.644 | 101 | 59 | 2 | 22 | 122 | 161 | 255 | 1.04e-14 | 73.6 |
MS.gene047642.t1 | AT3G54390 | 26.522 | 230 | 139 | 4 | 22 | 230 | 38 | 258 | 1.10e-14 | 72.4 |
MS.gene047642.t1 | AT3G54390 | 26.522 | 230 | 139 | 4 | 22 | 230 | 54 | 274 | 1.39e-14 | 72.4 |
MS.gene047642.t1 | AT3G58630 | 30.769 | 117 | 68 | 2 | 22 | 128 | 26 | 139 | 1.18e-13 | 69.7 |
MS.gene047642.t1 | AT3G58630 | 30.769 | 117 | 68 | 2 | 22 | 128 | 26 | 139 | 1.19e-13 | 69.7 |
MS.gene047642.t1 | AT3G14180 | 34.043 | 94 | 57 | 3 | 22 | 115 | 84 | 172 | 5.97e-11 | 62.4 |
Find 80 sgRNAs with CRISPR-Local
Find 87 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTCTTGTTACTGTTGGTTTC+TGG | 0.153076 | 5.3:-9792802 | None:intergenic |
GTAAGCTCGAATGAGGTTAA+TGG | 0.275887 | 5.3:-9792399 | None:intergenic |
GATTCCATTGGAAAGGCATT+TGG | 0.308166 | 5.3:+9793031 | MS.gene047642:CDS |
ACGACATTGAAGAGCGGTTT+TGG | 0.311108 | 5.3:-9792528 | None:intergenic |
GAATGAGGTTAATGGTTTCT+TGG | 0.338119 | 5.3:-9792391 | None:intergenic |
TTCTTGGTGGGTCCATGGGA+TGG | 0.355899 | 5.3:-9792375 | None:intergenic |
CCGTCGCTATCGTCGGAGAT+AGG | 0.363885 | 5.3:-9792713 | None:intergenic |
TCTTGGTGGGTCCATGGGAT+GGG | 0.368132 | 5.3:-9792374 | None:intergenic |
GATTAGAGATGGAGAATAAG+AGG | 0.371813 | 5.3:+9792972 | MS.gene047642:CDS |
ATTCCATTGGAAAGGCATTT+GGG | 0.374598 | 5.3:+9793032 | MS.gene047642:CDS |
ATGGTTTCTTGGTGGGTCCA+TGG | 0.378553 | 5.3:-9792380 | None:intergenic |
TTTCAGATCGGTGGCGTTGA+CGG | 0.386482 | 5.3:-9792568 | None:intergenic |
GCCCACTCCGCGGCAGTCAA+TGG | 0.394607 | 5.3:+9792450 | MS.gene047642:CDS |
ATGGGTTGAGGTTTCTTTGT+GGG | 0.395257 | 5.3:-9792356 | None:intergenic |
GAAAGAGGTCGGACGGAGAT+AGG | 0.403361 | 5.3:-9792680 | None:intergenic |
CCGCCGGTTCTTCTCGATCC+TGG | 0.419395 | 5.3:+9792615 | MS.gene047642:CDS |
TGGAGGATTGTTGATTCCAT+TGG | 0.426166 | 5.3:+9793019 | MS.gene047642:CDS |
TGGGTCCATGGGATGGGTTG+AGG | 0.432168 | 5.3:-9792368 | None:intergenic |
AGCTTTGCAGAGAGGATTGT+AGG | 0.434747 | 5.3:+9792902 | MS.gene047642:CDS |
TGGTTTCTTGGTGGGTCCAT+GGG | 0.436356 | 5.3:-9792379 | None:intergenic |
ATAGTGCTGCTAGGTCTGTT+AGG | 0.441997 | 5.3:+9792753 | MS.gene047642:CDS |
TAAGAGAATACCATTTCTCT+TGG | 0.442052 | 5.3:-9792421 | None:intergenic |
CCCATTGACTGCCGCGGAGT+GGG | 0.449342 | 5.3:-9792451 | None:intergenic |
TTCGAGCTTACCAAGAGAAA+TGG | 0.455451 | 5.3:+9792411 | MS.gene047642:CDS |
TGCAGAGAGGATTGTAGGGT+TGG | 0.456384 | 5.3:+9792907 | MS.gene047642:CDS |
GAGGTTAATGGTTTCTTGGT+GGG | 0.461484 | 5.3:-9792387 | None:intergenic |
TGTTGTTGTCTTGTTACTGT+TGG | 0.461863 | 5.3:-9792809 | None:intergenic |
CCCACTCCGCGGCAGTCAAT+GGG | 0.462147 | 5.3:+9792451 | MS.gene047642:CDS |
AGAGAGGTTTAGATTAGAGA+TGG | 0.466781 | 5.3:+9792961 | MS.gene047642:CDS |
GATGGGTTGAGGTTTCTTTG+TGG | 0.466878 | 5.3:-9792357 | None:intergenic |
TTGAGGTTTCTTTGTGGGAA+GGG | 0.468718 | 5.3:-9792351 | None:intergenic |
CTGCCAGGATCGAGAAGAAC+CGG | 0.473658 | 5.3:-9792618 | None:intergenic |
TCCCATTGACTGCCGCGGAG+TGG | 0.479922 | 5.3:-9792452 | None:intergenic |
GTATGATACTTGAATCTCAA+TGG | 0.493726 | 5.3:+9792999 | MS.gene047642:CDS |
TCTCTTGGTAAGCTCGAATG+AGG | 0.503486 | 5.3:-9792406 | None:intergenic |
TGAGGTTAATGGTTTCTTGG+TGG | 0.505014 | 5.3:-9792388 | None:intergenic |
CGTCGCTATCGTCGGAGATA+GGG | 0.505081 | 5.3:-9792712 | None:intergenic |
GCTTTGCAGAGAGGATTGTA+GGG | 0.507408 | 5.3:+9792903 | MS.gene047642:CDS |
GGAAGGGAAAGAGTGAGTTC+TGG | 0.514086 | 5.3:-9792335 | None:intergenic |
TCTTCAATGTCGTCATAAGA+TGG | 0.539576 | 5.3:+9792538 | MS.gene047642:CDS |
GATTGTTGATTCCATTGGAA+AGG | 0.539782 | 5.3:+9793024 | MS.gene047642:CDS |
TAAGAAGATGGAGATGATGA+AGG | 0.556347 | 5.3:+9792934 | MS.gene047642:CDS |
CGGCAGTCAATGGGAAGAAG+TGG | 0.558439 | 5.3:+9792460 | MS.gene047642:CDS |
ATAGGGTGCTTCTGAGAAAG+AGG | 0.564002 | 5.3:-9792695 | None:intergenic |
GTTGAGGTTTCTTTGTGGGA+AGG | 0.565690 | 5.3:-9792352 | None:intergenic |
GGATCGAGAAGAACCGGCGG+AGG | 0.569200 | 5.3:-9792612 | None:intergenic |
GGTCGGACGGAGATAGGTAA+AGG | 0.569635 | 5.3:-9792674 | None:intergenic |
AGGGTTGGAAAATAAGAAGA+TGG | 0.571203 | 5.3:+9792922 | MS.gene047642:CDS |
AGAAACCTCAACCCATCCCA+TGG | 0.573775 | 5.3:+9792363 | MS.gene047642:CDS |
CTTCTTCCCATTGACTGCCG+CGG | 0.577676 | 5.3:-9792457 | None:intergenic |
CTGCTAGGTCTGTTAGGTCA+AGG | 0.578720 | 5.3:+9792759 | MS.gene047642:CDS |
CCGACGATAGCGACGGTGAG+AGG | 0.582725 | 5.3:+9792720 | MS.gene047642:CDS |
CTCACCGCTACTTCCTCCGC+CGG | 0.582798 | 5.3:+9792599 | MS.gene047642:CDS |
CCTCTCACCGTCGCTATCGT+CGG | 0.588877 | 5.3:-9792720 | None:intergenic |
AGACCCAAATGCCTTTCCAA+TGG | 0.589025 | 5.3:-9793035 | None:intergenic |
CGGAGGAAGTAGCGGTGAGG+CGG | 0.599547 | 5.3:-9792595 | None:intergenic |
CGACGATAGCGACGGTGAGA+GGG | 0.604292 | 5.3:+9792721 | MS.gene047642:CDS |
AGTGAGTTCTGGTGAAGCGG+TGG | 0.606604 | 5.3:-9792324 | None:intergenic |
CATGAGACGAAAATACTGCC+AGG | 0.607104 | 5.3:-9792633 | None:intergenic |
AAGAGTGAGTTCTGGTGAAG+CGG | 0.610541 | 5.3:-9792327 | None:intergenic |
CTTCTGAGAAAGAGGTCGGA+CGG | 0.613702 | 5.3:-9792687 | None:intergenic |
AGTTGAGAAGCTTTGCAGAG+AGG | 0.619704 | 5.3:+9792894 | MS.gene047642:CDS |
TGATGAAGAGGAGGGAGTGA+TGG | 0.625795 | 5.3:+9792853 | MS.gene047642:CDS |
GGTGCTTCTGAGAAAGAGGT+CGG | 0.636676 | 5.3:-9792691 | None:intergenic |
AGAACCGGCGGAGGAAGTAG+CGG | 0.637741 | 5.3:-9792603 | None:intergenic |
AGATGATGAAGGAAACAGAG+AGG | 0.638850 | 5.3:+9792945 | MS.gene047642:CDS |
TGAAACTGATGATGAAGAGG+AGG | 0.646384 | 5.3:+9792844 | MS.gene047642:CDS |
GAAACTGATGATGAAGAGGA+GGG | 0.650226 | 5.3:+9792845 | MS.gene047642:CDS |
TGATGAAACTGATGATGAAG+AGG | 0.652723 | 5.3:+9792841 | MS.gene047642:CDS |
TGATACTTGAATCTCAATGG+AGG | 0.662965 | 5.3:+9793002 | MS.gene047642:CDS |
CTCATGGATGATCTTGAACG+CGG | 0.669974 | 5.3:+9792650 | MS.gene047642:CDS |
CTTATGACGACATTGAAGAG+CGG | 0.678566 | 5.3:-9792534 | None:intergenic |
CTTAAACGTGGCCCACTCCG+CGG | 0.683812 | 5.3:+9792440 | MS.gene047642:CDS |
CCTATCTCCGACGATAGCGA+CGG | 0.701116 | 5.3:+9792713 | MS.gene047642:CDS |
CCAGGATCGAGAAGAACCGG+CGG | 0.705218 | 5.3:-9792615 | None:intergenic |
GTAATCGTAGCCGCAACGAG+CGG | 0.705311 | 5.3:-9792495 | None:intergenic |
CGGCGGAGGAAGTAGCGGTG+AGG | 0.714161 | 5.3:-9792598 | None:intergenic |
AAATGGTATTCTCTTAAACG+TGG | 0.727462 | 5.3:+9792428 | MS.gene047642:CDS |
GATGGCGAAGAGTTTGACAG+CGG | 0.738106 | 5.3:+9792871 | MS.gene047642:CDS |
GTTGTCGTAGCCGCTCGTTG+CGG | 0.744946 | 5.3:+9792485 | MS.gene047642:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
AAATGGTATTCTCTTAAACG+TGG | + | chr5.3:9792428-9792447 | MS.gene047642:CDS | 30.0% | |
GTATGATACTTGAATCTCAA+TGG | + | chr5.3:9792999-9793018 | MS.gene047642:CDS | 30.0% | |
TAAGAGAATACCATTTCTCT+TGG | - | chr5.3:9792424-9792443 | None:intergenic | 30.0% | |
AGAGAGGTTTAGATTAGAGA+TGG | + | chr5.3:9792961-9792980 | MS.gene047642:CDS | 35.0% | |
AGGGTTGGAAAATAAGAAGA+TGG | + | chr5.3:9792922-9792941 | MS.gene047642:CDS | 35.0% | |
GAATGAGGTTAATGGTTTCT+TGG | - | chr5.3:9792394-9792413 | None:intergenic | 35.0% | |
GATTAGAGATGGAGAATAAG+AGG | + | chr5.3:9792972-9792991 | MS.gene047642:CDS | 35.0% | |
TAAGAAGATGGAGATGATGA+AGG | + | chr5.3:9792934-9792953 | MS.gene047642:CDS | 35.0% | |
TCTTCAATGTCGTCATAAGA+TGG | + | chr5.3:9792538-9792557 | MS.gene047642:CDS | 35.0% | |
TGATACTTGAATCTCAATGG+AGG | + | chr5.3:9793002-9793021 | MS.gene047642:CDS | 35.0% | |
! | TGATGAAACTGATGATGAAG+AGG | + | chr5.3:9792841-9792860 | MS.gene047642:CDS | 35.0% |
! | TGTTGTTGTCTTGTTACTGT+TGG | - | chr5.3:9792812-9792831 | None:intergenic | 35.0% |
!! | ATTCCATTGGAAAGGCATTT+GGG | + | chr5.3:9793032-9793051 | MS.gene047642:CDS | 35.0% |
!! | GATTGTTGATTCCATTGGAA+AGG | + | chr5.3:9793024-9793043 | MS.gene047642:CDS | 35.0% |
AGATGATGAAGGAAACAGAG+AGG | + | chr5.3:9792945-9792964 | MS.gene047642:CDS | 40.0% | |
CTTATGACGACATTGAAGAG+CGG | - | chr5.3:9792537-9792556 | None:intergenic | 40.0% | |
GAGGTTAATGGTTTCTTGGT+GGG | - | chr5.3:9792390-9792409 | None:intergenic | 40.0% | |
GTAAGCTCGAATGAGGTTAA+TGG | - | chr5.3:9792402-9792421 | None:intergenic | 40.0% | |
TGAGGTTAATGGTTTCTTGG+TGG | - | chr5.3:9792391-9792410 | None:intergenic | 40.0% | |
TTCGAGCTTACCAAGAGAAA+TGG | + | chr5.3:9792411-9792430 | MS.gene047642:CDS | 40.0% | |
TTGAGGTTTCTTTGTGGGAA+GGG | - | chr5.3:9792354-9792373 | None:intergenic | 40.0% | |
! | ATGGGTTGAGGTTTCTTTGT+GGG | - | chr5.3:9792359-9792378 | None:intergenic | 40.0% |
! | GAAACTGATGATGAAGAGGA+GGG | + | chr5.3:9792845-9792864 | MS.gene047642:CDS | 40.0% |
! | TGAAAAAGCATAGTGCTGCT+AGG | + | chr5.3:9792744-9792763 | MS.gene047642:CDS | 40.0% |
! | TGAAACTGATGATGAAGAGG+AGG | + | chr5.3:9792844-9792863 | MS.gene047642:CDS | 40.0% |
!! | GATTCCATTGGAAAGGCATT+TGG | + | chr5.3:9793031-9793050 | MS.gene047642:CDS | 40.0% |
!! | GTCTTGTTACTGTTGGTTTC+TGG | - | chr5.3:9792805-9792824 | None:intergenic | 40.0% |
!! | TGGAGGATTGTTGATTCCAT+TGG | + | chr5.3:9793019-9793038 | MS.gene047642:CDS | 40.0% |
!!! | ATTGAAGAGCGGTTTTGGAA+GGG | - | chr5.3:9792526-9792545 | None:intergenic | 40.0% |
AGACCCAAATGCCTTTCCAA+TGG | - | chr5.3:9793038-9793057 | None:intergenic | 45.0% | |
AGCTTTGCAGAGAGGATTGT+AGG | + | chr5.3:9792902-9792921 | MS.gene047642:CDS | 45.0% | |
AGTTGAGAAGCTTTGCAGAG+AGG | + | chr5.3:9792894-9792913 | MS.gene047642:CDS | 45.0% | |
CATGAGACGAAAATACTGCC+AGG | - | chr5.3:9792636-9792655 | None:intergenic | 45.0% | |
CTCATGGATGATCTTGAACG+CGG | + | chr5.3:9792650-9792669 | MS.gene047642:CDS | 45.0% | |
GCTTTGCAGAGAGGATTGTA+GGG | + | chr5.3:9792903-9792922 | MS.gene047642:CDS | 45.0% | |
GTTGAGGTTTCTTTGTGGGA+AGG | - | chr5.3:9792355-9792374 | None:intergenic | 45.0% | |
TCTCTTGGTAAGCTCGAATG+AGG | - | chr5.3:9792409-9792428 | None:intergenic | 45.0% | |
! | AAGAGTGAGTTCTGGTGAAG+CGG | - | chr5.3:9792330-9792349 | None:intergenic | 45.0% |
! | ACGACATTGAAGAGCGGTTT+TGG | - | chr5.3:9792531-9792550 | None:intergenic | 45.0% |
! | ATAGGGTGCTTCTGAGAAAG+AGG | - | chr5.3:9792698-9792717 | None:intergenic | 45.0% |
! | ATAGTGCTGCTAGGTCTGTT+AGG | + | chr5.3:9792753-9792772 | MS.gene047642:CDS | 45.0% |
! | CTGGCAGTATTTTCGTCTCA+TGG | + | chr5.3:9792634-9792653 | MS.gene047642:CDS | 45.0% |
!! | GATGGGTTGAGGTTTCTTTG+TGG | - | chr5.3:9792360-9792379 | None:intergenic | 45.0% |
!! | TGAGGCGGTGTTTTTCAGAT+CGG | - | chr5.3:9792583-9792602 | None:intergenic | 45.0% |
!!! | CATTGAAGAGCGGTTTTGGA+AGG | - | chr5.3:9792527-9792546 | None:intergenic | 45.0% |
AGAAACCTCAACCCATCCCA+TGG | + | chr5.3:9792363-9792382 | MS.gene047642:CDS | 50.0% | |
CTGCTAGGTCTGTTAGGTCA+AGG | + | chr5.3:9792759-9792778 | MS.gene047642:CDS | 50.0% | |
GATGGCGAAGAGTTTGACAG+CGG | + | chr5.3:9792871-9792890 | MS.gene047642:CDS | 50.0% | |
GGAAGGGAAAGAGTGAGTTC+TGG | - | chr5.3:9792338-9792357 | None:intergenic | 50.0% | |
TGATGAAGAGGAGGGAGTGA+TGG | + | chr5.3:9792853-9792872 | MS.gene047642:CDS | 50.0% | |
TGCAGAGAGGATTGTAGGGT+TGG | + | chr5.3:9792907-9792926 | MS.gene047642:CDS | 50.0% | |
! | ATGGTTTCTTGGTGGGTCCA+TGG | - | chr5.3:9792383-9792402 | None:intergenic | 50.0% |
! | CTTCTGAGAAAGAGGTCGGA+CGG | - | chr5.3:9792690-9792709 | None:intergenic | 50.0% |
! | GGTGCTTCTGAGAAAGAGGT+CGG | - | chr5.3:9792694-9792713 | None:intergenic | 50.0% |
! | TGGTTTCTTGGTGGGTCCAT+GGG | - | chr5.3:9792382-9792401 | None:intergenic | 50.0% |
! | TTTCAGATCGGTGGCGTTGA+CGG | - | chr5.3:9792571-9792590 | None:intergenic | 50.0% |
CCTATCTCCGACGATAGCGA+CGG | + | chr5.3:9792713-9792732 | MS.gene047642:CDS | 55.0% | |
CGGCAGTCAATGGGAAGAAG+TGG | + | chr5.3:9792460-9792479 | MS.gene047642:CDS | 55.0% | |
CGTCGCTATCGTCGGAGATA+GGG | - | chr5.3:9792715-9792734 | None:intergenic | 55.0% | |
CTGCCAGGATCGAGAAGAAC+CGG | - | chr5.3:9792621-9792640 | None:intergenic | 55.0% | |
GAAAGAGGTCGGACGGAGAT+AGG | - | chr5.3:9792683-9792702 | None:intergenic | 55.0% | |
GGTCGGACGGAGATAGGTAA+AGG | - | chr5.3:9792677-9792696 | None:intergenic | 55.0% | |
GTAATCGTAGCCGCAACGAG+CGG | - | chr5.3:9792498-9792517 | None:intergenic | 55.0% | |
! | AGTGAGTTCTGGTGAAGCGG+TGG | - | chr5.3:9792327-9792346 | None:intergenic | 55.0% |
! | CTTCTTCCCATTGACTGCCG+CGG | - | chr5.3:9792460-9792479 | None:intergenic | 55.0% |
! | TCTTGGTGGGTCCATGGGAT+GGG | - | chr5.3:9792377-9792396 | None:intergenic | 55.0% |
! | TTCTTGGTGGGTCCATGGGA+TGG | - | chr5.3:9792378-9792397 | None:intergenic | 55.0% |
!! | GGCGGTGTTTTTCAGATCGG+TGG | - | chr5.3:9792580-9792599 | None:intergenic | 55.0% |
!!! | GAAGAGCGGTTTTGGAAGGG+TGG | - | chr5.3:9792523-9792542 | None:intergenic | 55.0% |
AGAACCGGCGGAGGAAGTAG+CGG | - | chr5.3:9792606-9792625 | None:intergenic | 60.0% | |
CCAGGATCGAGAAGAACCGG+CGG | - | chr5.3:9792618-9792637 | None:intergenic | 60.0% | |
CCGTCGCTATCGTCGGAGAT+AGG | - | chr5.3:9792716-9792735 | None:intergenic | 60.0% | |
CCTCTCACCGTCGCTATCGT+CGG | - | chr5.3:9792723-9792742 | None:intergenic | 60.0% | |
CGACGATAGCGACGGTGAGA+GGG | + | chr5.3:9792721-9792740 | MS.gene047642:CDS | 60.0% | |
CTTAAACGTGGCCCACTCCG+CGG | + | chr5.3:9792440-9792459 | MS.gene047642:CDS | 60.0% | |
GTTGTCGTAGCCGCTCGTTG+CGG | + | chr5.3:9792485-9792504 | MS.gene047642:CDS | 60.0% | |
!! | TGGGTCCATGGGATGGGTTG+AGG | - | chr5.3:9792371-9792390 | None:intergenic | 60.0% |
CCCACTCCGCGGCAGTCAAT+GGG | + | chr5.3:9792451-9792470 | MS.gene047642:CDS | 65.0% | |
CCGACGATAGCGACGGTGAG+AGG | + | chr5.3:9792720-9792739 | MS.gene047642:CDS | 65.0% | |
CGGAGGAAGTAGCGGTGAGG+CGG | - | chr5.3:9792598-9792617 | None:intergenic | 65.0% | |
CTCACCGCTACTTCCTCCGC+CGG | + | chr5.3:9792599-9792618 | MS.gene047642:CDS | 65.0% | |
GGATCGAGAAGAACCGGCGG+AGG | - | chr5.3:9792615-9792634 | None:intergenic | 65.0% | |
! | CCCATTGACTGCCGCGGAGT+GGG | - | chr5.3:9792454-9792473 | None:intergenic | 65.0% |
! | TCCCATTGACTGCCGCGGAG+TGG | - | chr5.3:9792455-9792474 | None:intergenic | 65.0% |
!! | CCGCCGGTTCTTCTCGATCC+TGG | + | chr5.3:9792615-9792634 | MS.gene047642:CDS | 65.0% |
CGGCGGAGGAAGTAGCGGTG+AGG | - | chr5.3:9792601-9792620 | None:intergenic | 70.0% | |
GCCCACTCCGCGGCAGTCAA+TGG | + | chr5.3:9792450-9792469 | MS.gene047642:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.3 | gene | 9792320 | 9793063 | 9792320 | ID=MS.gene047642 |
chr5.3 | mRNA | 9792320 | 9793063 | 9792320 | ID=MS.gene047642.t1;Parent=MS.gene047642 |
chr5.3 | exon | 9792320 | 9793063 | 9792320 | ID=MS.gene047642.t1.exon1;Parent=MS.gene047642.t1 |
chr5.3 | CDS | 9792320 | 9793063 | 9792320 | ID=cds.MS.gene047642.t1;Parent=MS.gene047642.t1 |
Gene Sequence |
Protein sequence |