Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene047714.t1 | XP_003611877.2 | 96 | 527 | 19 | 1 | 1 | 527 | 1 | 525 | 8.30E-268 | 932.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene047714.t1 | Q8W4F0 | 66.5 | 559 | 148 | 4 | 1 | 526 | 1 | 553 | 5.0e-189 | 662.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene047714.t1 | G7KAS2 | 96.0 | 527 | 19 | 1 | 1 | 527 | 1 | 525 | 6.0e-268 | 932.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene047714.t1 | TR | Others |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene047714.t1 | MTR_5g018900 | 97.154 | 527 | 13 | 1 | 1 | 527 | 1 | 525 | 0.0 | 1065 |
| MS.gene047714.t1 | MTR_8g078410 | 74.812 | 532 | 127 | 5 | 1 | 526 | 1 | 531 | 0.0 | 769 |
| MS.gene047714.t1 | MTR_1g021835 | 58.365 | 526 | 161 | 6 | 1 | 526 | 1 | 468 | 0.0 | 607 |
| MS.gene047714.t1 | MTR_5g081160 | 50.568 | 528 | 203 | 6 | 1 | 526 | 32 | 503 | 4.36e-178 | 511 |
| MS.gene047714.t1 | MTR_1g021835 | 57.692 | 416 | 125 | 5 | 1 | 416 | 1 | 365 | 6.19e-169 | 484 |
| MS.gene047714.t1 | MTR_3g069410 | 56.733 | 453 | 165 | 6 | 101 | 526 | 64 | 512 | 7.41e-169 | 488 |
| MS.gene047714.t1 | MTR_1g021835 | 55.775 | 355 | 110 | 3 | 1 | 355 | 1 | 308 | 7.30e-138 | 401 |
| MS.gene047714.t1 | MTR_5g018910 | 76.404 | 89 | 20 | 1 | 156 | 244 | 496 | 583 | 1.27e-41 | 158 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene047714.t1 | AT4G36860 | 66.190 | 559 | 150 | 6 | 1 | 526 | 1 | 553 | 0.0 | 710 |
| MS.gene047714.t1 | AT4G36860 | 63.918 | 582 | 149 | 7 | 1 | 526 | 1 | 577 | 0.0 | 703 |
| MS.gene047714.t1 | AT1G19270 | 52.055 | 584 | 169 | 9 | 1 | 526 | 1 | 531 | 0.0 | 580 |
| MS.gene047714.t1 | AT1G19270 | 52.055 | 584 | 169 | 9 | 1 | 526 | 1 | 531 | 0.0 | 580 |
| MS.gene047714.t1 | AT4G36860 | 63.920 | 449 | 128 | 5 | 1 | 416 | 1 | 448 | 0.0 | 564 |
| MS.gene047714.t1 | AT2G39830 | 57.718 | 447 | 164 | 5 | 102 | 526 | 75 | 518 | 3.96e-180 | 516 |
| MS.gene047714.t1 | AT2G39830 | 56.484 | 455 | 172 | 6 | 94 | 526 | 77 | 527 | 2.03e-179 | 515 |
| MS.gene047714.t1 | AT2G39830 | 56.114 | 458 | 172 | 7 | 94 | 526 | 77 | 530 | 2.43e-177 | 510 |
| MS.gene047714.t1 | AT5G66620 | 47.083 | 480 | 227 | 9 | 47 | 519 | 181 | 640 | 3.97e-136 | 409 |
| MS.gene047714.t1 | AT5G66620 | 47.083 | 480 | 227 | 9 | 47 | 519 | 172 | 631 | 1.20e-135 | 407 |
| MS.gene047714.t1 | AT5G66620 | 47.083 | 480 | 227 | 9 | 47 | 519 | 172 | 631 | 1.20e-135 | 407 |
| MS.gene047714.t1 | AT2G39830 | 53.315 | 362 | 144 | 6 | 94 | 432 | 77 | 436 | 1.34e-134 | 397 |
| MS.gene047714.t1 | AT5G66610 | 46.507 | 501 | 226 | 10 | 45 | 520 | 68 | 551 | 3.65e-130 | 390 |
| MS.gene047714.t1 | AT5G66610 | 46.389 | 457 | 203 | 8 | 66 | 520 | 8 | 424 | 2.26e-127 | 379 |
| MS.gene047714.t1 | AT5G66610 | 43.071 | 534 | 223 | 11 | 45 | 520 | 68 | 578 | 1.98e-124 | 377 |
| MS.gene047714.t1 | AT5G66630 | 46.154 | 416 | 180 | 9 | 107 | 519 | 324 | 698 | 2.07e-112 | 349 |
| MS.gene047714.t1 | AT5G66640 | 42.516 | 461 | 232 | 12 | 79 | 519 | 23 | 470 | 3.97e-107 | 328 |
| MS.gene047714.t1 | AT5G66640 | 42.299 | 461 | 232 | 12 | 79 | 519 | 23 | 469 | 1.31e-106 | 327 |
| MS.gene047714.t1 | AT5G66640 | 43.929 | 453 | 221 | 13 | 81 | 519 | 5 | 438 | 2.17e-106 | 326 |
| MS.gene047714.t1 | AT5G66640 | 43.929 | 453 | 221 | 13 | 81 | 519 | 5 | 438 | 2.17e-106 | 326 |
| MS.gene047714.t1 | AT5G17890 | 51.075 | 372 | 172 | 5 | 153 | 519 | 1235 | 1601 | 1.33e-104 | 344 |
| MS.gene047714.t1 | AT5G66640 | 50.464 | 323 | 151 | 6 | 205 | 519 | 10 | 331 | 3.76e-101 | 308 |
| MS.gene047714.t1 | AT5G66640 | 39.046 | 461 | 244 | 13 | 79 | 519 | 23 | 466 | 8.43e-91 | 286 |
| MS.gene047714.t1 | AT5G66640 | 38.829 | 461 | 244 | 13 | 79 | 519 | 23 | 465 | 5.05e-90 | 284 |
| MS.gene047714.t1 | AT5G66620 | 41.983 | 343 | 172 | 9 | 47 | 382 | 172 | 494 | 5.18e-78 | 254 |
Find 126 sgRNAs with CRISPR-Local
Find 300 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGATTCCTTCTTCAATTTC+TGG | 0.060868 | 5.3:-10696734 | None:intergenic |
| AGTATAGAGCTCATCCTTTC+TGG | 0.166643 | 5.3:+10695663 | MS.gene047714:CDS |
| GGCTCTAATCATAGAATTTC+AGG | 0.190682 | 5.3:+10692808 | MS.gene047714:CDS |
| TCTCCCTGTAGCAGGATTTA+TGG | 0.233835 | 5.3:-10694652 | None:intergenic |
| CATGCATGGCTCAGGCTTAA+AGG | 0.237169 | 5.3:+10696598 | MS.gene047714:CDS |
| GTCTTCCTCAAGTTGATCTT+TGG | 0.266836 | 5.3:-10693538 | None:intergenic |
| GCAGCAAGTTCCTATGCTTT+TGG | 0.277916 | 5.3:+10696012 | MS.gene047714:CDS |
| CATCGACGGGTCAGTCTATA+AGG | 0.282747 | 5.3:-10696416 | None:intergenic |
| GTGTCTAGACTCAGCAATTA+TGG | 0.285275 | 5.3:+10695919 | MS.gene047714:CDS |
| CGGTGTCCTGCCCCTATACT+TGG | 0.286586 | 5.3:-10696371 | None:intergenic |
| TACCAGGCGGTACTTAAGTA+TGG | 0.294982 | 5.3:+10696980 | MS.gene047714:CDS |
| AACATGGTGATGATAGGATT+TGG | 0.332590 | 5.3:+10692848 | MS.gene047714:CDS |
| AAGCAGAGTCCTCTAGTTTC+AGG | 0.333483 | 5.3:-10696207 | None:intergenic |
| ACCTCTTTCCGCCAGGATTC+AGG | 0.342059 | 5.3:+10693649 | MS.gene047714:CDS |
| TTAGAATCAGAGCTCTATTC+TGG | 0.345608 | 5.3:+10696779 | MS.gene047714:CDS |
| TCAGAGCTCTATTCTGGATC+TGG | 0.372505 | 5.3:+10696785 | MS.gene047714:CDS |
| TAAGTTGCATGGGAGGGGTC+TGG | 0.385209 | 5.3:+10694378 | MS.gene047714:CDS |
| GTCCTCTAGTTTCAGGGAAA+TGG | 0.403956 | 5.3:-10696200 | None:intergenic |
| TCAATTTCTGGCCTCAAGTT+GGG | 0.412121 | 5.3:-10696722 | None:intergenic |
| TTCTTGCAAACATCACATCT+TGG | 0.412310 | 5.3:-10694683 | None:intergenic |
| TTCAATTTCTGGCCTCAAGT+TGG | 0.417922 | 5.3:-10696723 | None:intergenic |
| ACATGGTGATGATAGGATTT+GGG | 0.421929 | 5.3:+10692849 | MS.gene047714:CDS |
| ATGGAAAAGTTCCGGTCAAA+TGG | 0.421969 | 5.3:-10697027 | None:intergenic |
| TGCTGTCGAGCTCATGTGTT+GGG | 0.431285 | 5.3:-10695700 | None:intergenic |
| TCTTGCAAACATCACATCTT+GGG | 0.448902 | 5.3:-10694682 | None:intergenic |
| ATGGCAAACATGGTGATGAT+AGG | 0.450210 | 5.3:+10692842 | MS.gene047714:CDS |
| GTGATGCTTCTCCCTGTAGC+AGG | 0.451634 | 5.3:-10694660 | None:intergenic |
| TGAAGGTTTAAATATGAAAG+TGG | 0.458252 | 5.3:+10695988 | MS.gene047714:CDS |
| CTAACCTCATAATCAGTGAT+TGG | 0.460726 | 5.3:-10694437 | None:intergenic |
| CGGTCAAATGGATATGATCA+AGG | 0.464591 | 5.3:-10697015 | None:intergenic |
| GGCTGTCACTTCGCATCGAC+GGG | 0.470821 | 5.3:-10696429 | None:intergenic |
| TGGTTTGCAAAGTTTCTCAA+TGG | 0.474456 | 5.3:+10692787 | MS.gene047714:CDS |
| TATGTTTATAGATTGTTGAC+AGG | 0.479289 | 5.3:+10696550 | MS.gene047714:intron |
| TTTCTCTGCAGAATCTGTGC+TGG | 0.480650 | 5.3:+10694323 | MS.gene047714:intron |
| GCAGATGACAAGCATGGCAT+TGG | 0.483972 | 5.3:-10694415 | None:intergenic |
| GTGAGGTATCTGACTCAATC+TGG | 0.485020 | 5.3:-10696928 | None:intergenic |
| GCTGGATGCAATGCTGAGAT+TGG | 0.485337 | 5.3:+10694341 | MS.gene047714:CDS |
| TTGTTGTAGCTGCGAAAGAA+TGG | 0.486878 | 5.3:+10695730 | MS.gene047714:CDS |
| GTCTTCTGCATCATCGAAGA+AGG | 0.493744 | 5.3:+10696859 | MS.gene047714:CDS |
| GTATTTCATGGTAGAGAGGT+TGG | 0.496331 | 5.3:-10695955 | None:intergenic |
| TCAGATACCTCACCAGCCTA+TGG | 0.497390 | 5.3:+10696938 | MS.gene047714:CDS |
| ATGAGGCCAGCTGAATTAGC+CGG | 0.498369 | 5.3:-10695638 | None:intergenic |
| AGATAATGCATGCATGGCTC+AGG | 0.501774 | 5.3:+10696590 | MS.gene047714:CDS |
| TCTCCCCACCTCTTTCCGCC+AGG | 0.502749 | 5.3:+10693642 | MS.gene047714:CDS |
| TCTGCCAATCACTGATTATG+AGG | 0.506652 | 5.3:+10694433 | MS.gene047714:CDS |
| CAGAGCTCTATTCTGGATCT+GGG | 0.507459 | 5.3:+10696786 | MS.gene047714:CDS |
| CTTGATCATATCCATTTGAC+CGG | 0.509477 | 5.3:+10697016 | MS.gene047714:CDS |
| ATATATAATTACCTGAATCC+TGG | 0.511010 | 5.3:-10693660 | None:intergenic |
| CTGAAAGGGAAGAAAGTTGT+TGG | 0.513320 | 5.3:+10693083 | MS.gene047714:CDS |
| TGGATTCAGATCGGGTTACC+AGG | 0.515296 | 5.3:+10696964 | MS.gene047714:CDS |
| ATTCAATTAAGTTTGAGCAC+TGG | 0.516076 | 5.3:+10693579 | MS.gene047714:CDS |
| CTTACCATAAATCCTGCTAC+AGG | 0.517147 | 5.3:+10694648 | MS.gene047714:CDS |
| AGCAGAGTCCTCTAGTTTCA+GGG | 0.517192 | 5.3:-10696206 | None:intergenic |
| CAGATCCCGGCTAATTCAGC+TGG | 0.521586 | 5.3:+10695632 | MS.gene047714:intron |
| CTGTAGCAGGATTTATGGTA+AGG | 0.522745 | 5.3:-10694647 | None:intergenic |
| GCACTAAATGAGGCCATTGA+GGG | 0.528915 | 5.3:+10696046 | MS.gene047714:CDS |
| TATGGAGATGGATTCAGATC+GGG | 0.531474 | 5.3:+10696956 | MS.gene047714:CDS |
| ACCTCACCAGCCTATGGAGA+TGG | 0.534287 | 5.3:+10696944 | MS.gene047714:CDS |
| CTGAATCCATCTCCATAGGC+TGG | 0.535577 | 5.3:-10696950 | None:intergenic |
| CGATCTGAATCCATCTCCAT+AGG | 0.537412 | 5.3:-10696954 | None:intergenic |
| ACCTGAATCCTGGCGGAAAG+AGG | 0.537694 | 5.3:-10693650 | None:intergenic |
| TGGCTGTCACTTCGCATCGA+CGG | 0.539258 | 5.3:-10696430 | None:intergenic |
| CTCATGAGATAATGCATGCA+TGG | 0.539682 | 5.3:+10696584 | MS.gene047714:CDS |
| CCTTCTAGCTAAAATTCAGC+AGG | 0.540630 | 5.3:+10693497 | MS.gene047714:CDS |
| GGCGGAAAGAGGTGGGGAGA+AGG | 0.540751 | 5.3:-10693639 | None:intergenic |
| AGCACTAAATGAGGCCATTG+AGG | 0.541852 | 5.3:+10696045 | MS.gene047714:CDS |
| CCTCAAGTTGATCTTTGGCA+CGG | 0.547231 | 5.3:-10693533 | None:intergenic |
| TATCAGAGGAGGATCTGAAA+GGG | 0.551935 | 5.3:+10693069 | MS.gene047714:CDS |
| CATGCATTATCTCATGAGCT+AGG | 0.555420 | 5.3:-10696579 | None:intergenic |
| CTATCAGAGGAGGATCTGAA+AGG | 0.555665 | 5.3:+10693068 | MS.gene047714:CDS |
| TGAATCCTGGCGGAAAGAGG+TGG | 0.559104 | 5.3:-10693647 | None:intergenic |
| GAATCCTGGCGGAAAGAGGT+GGG | 0.560765 | 5.3:-10693646 | None:intergenic |
| AGAAAACCAAGTATAGGGGC+AGG | 0.561310 | 5.3:+10696365 | MS.gene047714:CDS |
| TGAGGCCAGCTGAATTAGCC+GGG | 0.562601 | 5.3:-10695637 | None:intergenic |
| TTGAGGCCAGAAATTGAAGA+AGG | 0.563599 | 5.3:+10696728 | MS.gene047714:CDS |
| GGGCAATACAATGGCAAACA+TGG | 0.564946 | 5.3:+10692832 | MS.gene047714:CDS |
| CTGAGTGCAGGATGATTTGA+CGG | 0.565766 | 5.3:+10693004 | MS.gene047714:intron |
| ACGGGTCAGTCTATAAGGCT+TGG | 0.569106 | 5.3:-10696411 | None:intergenic |
| TTTAAGAAAACCAAGTATAG+GGG | 0.569581 | 5.3:+10696361 | MS.gene047714:CDS |
| GTAAGGACGGTTGCTAGACA+TGG | 0.570040 | 5.3:-10694630 | None:intergenic |
| GCCCATACTTAAGTACCGCC+TGG | 0.571618 | 5.3:-10696982 | None:intergenic |
| AGGAAGACGAGCAACTTGCA+AGG | 0.572451 | 5.3:+10693553 | MS.gene047714:CDS |
| TCTAGTATTTCATGGTAGAG+AGG | 0.573281 | 5.3:-10695959 | None:intergenic |
| CTATGGAGATGGATTCAGAT+CGG | 0.581389 | 5.3:+10696955 | MS.gene047714:CDS |
| TGCAATGCTGAGATTGGCCA+TGG | 0.581581 | 5.3:+10694347 | MS.gene047714:CDS |
| TGTCTTTCCACCAAAAGCAT+AGG | 0.584605 | 5.3:-10696022 | None:intergenic |
| ACCAGGCGGTACTTAAGTAT+GGG | 0.585146 | 5.3:+10696981 | MS.gene047714:CDS |
| TTATAGGTTATCCCAACTTG+AGG | 0.585861 | 5.3:+10696711 | MS.gene047714:intron |
| TGGTTATCATGTCTGTGACT+CGG | 0.588138 | 5.3:-10696391 | None:intergenic |
| AGGAATCCCTACGGTGGTGA+CGG | 0.592884 | 5.3:-10696244 | None:intergenic |
| GTGCTGTCGAGCTCATGTGT+TGG | 0.594423 | 5.3:-10695701 | None:intergenic |
| AGAAGGAATCTGTCAAGTGT+TGG | 0.595703 | 5.3:+10696745 | MS.gene047714:CDS |
| GGAAAGACAAGCACTAAATG+AGG | 0.596661 | 5.3:+10696036 | MS.gene047714:CDS |
| AAGGCCATACAAAACAAGAA+TGG | 0.597233 | 5.3:-10696450 | None:intergenic |
| TTCTTCGATGATGCAGAAGA+CGG | 0.597877 | 5.3:-10696857 | None:intergenic |
| GGAAGACGAGCAACTTGCAA+GGG | 0.598064 | 5.3:+10693554 | MS.gene047714:CDS |
| AGCAGGATTTATGGTAAGGA+CGG | 0.599912 | 5.3:-10694643 | None:intergenic |
| TCCATCTCCATAGGCTGGTG+AGG | 0.600925 | 5.3:-10696945 | None:intergenic |
| GATGAGGAAGATGAGAATGT+TGG | 0.603051 | 5.3:+10693450 | MS.gene047714:CDS |
| ACAACTTTGTAAAATTGATG+AGG | 0.604993 | 5.3:+10693434 | MS.gene047714:CDS |
| GTCAAGTGTTGGCTCATATG+TGG | 0.608811 | 5.3:+10696756 | MS.gene047714:CDS |
| GGTCAAATGGATATGATCAA+GGG | 0.611026 | 5.3:-10697014 | None:intergenic |
| TGCACTCTCTCTATCAGAGG+AGG | 0.611907 | 5.3:+10693058 | MS.gene047714:CDS |
| ACTGGTTCTCCTCCTCGACA+TGG | 0.617399 | 5.3:+10693597 | MS.gene047714:CDS |
| AATCCTGGCGGAAAGAGGTG+GGG | 0.621633 | 5.3:-10693645 | None:intergenic |
| CACCATTTCCCTGAAACTAG+AGG | 0.634149 | 5.3:+10696198 | MS.gene047714:CDS |
| GGATAGTCATCATAGTTCAG+TGG | 0.634939 | 5.3:+10692870 | MS.gene047714:CDS |
| AGAGAATCTTTGCCATGTCG+AGG | 0.635073 | 5.3:-10693609 | None:intergenic |
| GATGAGCTCTATACTCAATG+AGG | 0.636611 | 5.3:-10695655 | None:intergenic |
| ATTTCAGGAGGGCAATACAA+TGG | 0.636955 | 5.3:+10692823 | MS.gene047714:CDS |
| TTACCATAAATCCTGCTACA+GGG | 0.641135 | 5.3:+10694649 | MS.gene047714:CDS |
| GCATGGCATTGGAAGCATTG+TGG | 0.649168 | 5.3:-10694404 | None:intergenic |
| GATGAAGACGAAGACGAAGG+CGG | 0.650656 | 5.3:-10696821 | None:intergenic |
| TCTTCTGCATCATCGAAGAA+GGG | 0.657416 | 5.3:+10696860 | MS.gene047714:CDS |
| AATTGCACTCTCTCTATCAG+AGG | 0.658444 | 5.3:+10693055 | MS.gene047714:CDS |
| TCTAATCATAGAATTTCAGG+AGG | 0.660809 | 5.3:+10692811 | MS.gene047714:CDS |
| CCGTGCCAAAGATCAACTTG+AGG | 0.667158 | 5.3:+10693533 | MS.gene047714:CDS |
| TTCGATGATGCAGAAGACGG+CGG | 0.671463 | 5.3:-10696854 | None:intergenic |
| GAATCTTTGCCATGTCGAGG+AGG | 0.671664 | 5.3:-10693606 | None:intergenic |
| TTGTAGCTGCGAAAGAATGG+AGG | 0.672189 | 5.3:+10695733 | MS.gene047714:CDS |
| GATGATGAAGACGAAGACGA+AGG | 0.677210 | 5.3:-10696824 | None:intergenic |
| TATAATTACCTGAATCCTGG+CGG | 0.684417 | 5.3:-10693657 | None:intergenic |
| TGATTGGCAGATGACAAGCA+TGG | 0.690761 | 5.3:-10694421 | None:intergenic |
| CTAATCATAGAATTTCAGGA+GGG | 0.718623 | 5.3:+10692812 | MS.gene047714:CDS |
| CTTTCGCAGCTACAACAACG+AGG | 0.721804 | 5.3:-10695725 | None:intergenic |
| ATTCAGATCGGGTTACCAGG+CGG | 0.751020 | 5.3:+10696967 | MS.gene047714:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTTACTTAATAAGTTAT+AGG | - | chr5.3:10695335-10695354 | None:intergenic | 10.0% |
| !!! | AAATATATGGTTTTTTTTAT+AGG | + | chr5.3:10696695-10696714 | MS.gene047714:intron | 10.0% |
| !!! | AAGTAAATAATTCAATTTTT+AGG | - | chr5.3:10694214-10694233 | None:intergenic | 10.0% |
| !!! | TTTGAATCATTTTATATAAT+CGG | + | chr5.3:10693954-10693973 | MS.gene047714:intron | 10.0% |
| !!! | TTTTTTTTTATACTAACATA+TGG | + | chr5.3:10694161-10694180 | MS.gene047714:intron | 10.0% |
| !! | AAGATTTGTGAATTATATAA+CGG | + | chr5.3:10696311-10696330 | MS.gene047714:intron | 15.0% |
| !! | ACAATTATTAGATTTCAAAT+AGG | - | chr5.3:10695203-10695222 | None:intergenic | 15.0% |
| !! | CATAAATTAGAATAGATAAT+AGG | - | chr5.3:10695826-10695845 | None:intergenic | 15.0% |
| !! | CTATTATCTATTCTAATTTA+TGG | + | chr5.3:10695824-10695843 | MS.gene047714:intron | 15.0% |
| !! | TTAATGTGTATAAGAAATAT+GGG | + | chr5.3:10693179-10693198 | MS.gene047714:intron | 15.0% |
| !! | TTATGAAGATTATATCTATA+TGG | - | chr5.3:10694120-10694139 | None:intergenic | 15.0% |
| !!! | CAATTTTCATAAAAAGTATT+TGG | - | chr5.3:10693715-10693734 | None:intergenic | 15.0% |
| !!! | TACTTAGATTTTATTAACTA+AGG | - | chr5.3:10694069-10694088 | None:intergenic | 15.0% |
| !!! | TATTAAGTATTTCTGAATTA+TGG | + | chr5.3:10693829-10693848 | MS.gene047714:intron | 15.0% |
| !!! | TTGAATCATTTTATATAATC+GGG | + | chr5.3:10693955-10693974 | MS.gene047714:intron | 15.0% |
| !! | AAAAAAATCGTGAGATATAA+CGG | - | chr5.3:10694148-10694167 | None:intergenic | 20.0% |
| !! | ATAGTTTGAATATGTAATTG+TGG | + | chr5.3:10692977-10692996 | MS.gene047714:intron | 20.0% |
| !! | ATTTCTTTCATTTCAATAAC+TGG | + | chr5.3:10695106-10695125 | MS.gene047714:intron | 20.0% |
| !! | CAAAAAATTCTAGTATTTCA+TGG | - | chr5.3:10695970-10695989 | None:intergenic | 20.0% |
| !! | CAATACGATTATGAATAATA+CGG | + | chr5.3:10694581-10694600 | MS.gene047714:intron | 20.0% |
| !! | GTTAATGTGTATAAGAAATA+TGG | + | chr5.3:10693178-10693197 | MS.gene047714:intron | 20.0% |
| !! | GTTGTTCATTTGTTTAAATA+TGG | - | chr5.3:10694285-10694304 | None:intergenic | 20.0% |
| !! | TAATGTGTATAAGAAATATG+GGG | + | chr5.3:10693180-10693199 | MS.gene047714:intron | 20.0% |
| !! | TTAAAACATTAATAGCAACT+GGG | + | chr5.3:10695489-10695508 | MS.gene047714:intron | 20.0% |
| !!! | AAAAGATATTTTGAATCCTT+TGG | - | chr5.3:10695869-10695888 | None:intergenic | 20.0% |
| !!! | AAATATCTTTTTCTTGATGA+TGG | + | chr5.3:10695878-10695897 | MS.gene047714:CDS | 20.0% |
| !!! | ATTTTAAGAAAACCAAGTAT+AGG | + | chr5.3:10696359-10696378 | MS.gene047714:CDS | 20.0% |
| !!! | GAAATACTAGAATTTTTTGA+AGG | + | chr5.3:10695971-10695990 | MS.gene047714:CDS | 20.0% |
| !!! | TTTAACTTATACTTTGGTAT+GGG | - | chr5.3:10693354-10693373 | None:intergenic | 20.0% |
| !!! | TTTTAAGAAAACCAAGTATA+GGG | + | chr5.3:10696360-10696379 | MS.gene047714:CDS | 20.0% |
| ! | AAAGTAACAACTCTTAAGTT+AGG | - | chr5.3:10696153-10696172 | None:intergenic | 25.0% |
| ! | ACAACTTTGTAAAATTGATG+AGG | + | chr5.3:10693434-10693453 | MS.gene047714:CDS | 25.0% |
| ! | ATAACTATGACTGAAATTTG+AGG | - | chr5.3:10695272-10695291 | None:intergenic | 25.0% |
| ! | ATATATAATTACCTGAATCC+TGG | - | chr5.3:10693663-10693682 | None:intergenic | 25.0% |
| ! | ATCCATGAACATATGAAAAT+AGG | - | chr5.3:10694254-10694273 | None:intergenic | 25.0% |
| ! | ATTATGAGATAAAGAACATG+AGG | - | chr5.3:10693379-10693398 | None:intergenic | 25.0% |
| ! | ATTTACTTTGTCACAAAACA+TGG | + | chr5.3:10694226-10694245 | MS.gene047714:intron | 25.0% |
| ! | CATACCAAAGTATAAGTTAA+AGG | + | chr5.3:10693353-10693372 | MS.gene047714:intron | 25.0% |
| ! | CTTTCACTGTATATAATTCA+AGG | + | chr5.3:10696523-10696542 | MS.gene047714:intron | 25.0% |
| ! | GCTAAGTTAGACAAAATATA+TGG | + | chr5.3:10696682-10696701 | MS.gene047714:intron | 25.0% |
| ! | GTTAAAACATTAATAGCAAC+TGG | + | chr5.3:10695488-10695507 | MS.gene047714:intron | 25.0% |
| ! | GTTTATCATGTTTCATTTCA+TGG | - | chr5.3:10694012-10694031 | None:intergenic | 25.0% |
| ! | GTTTCATAACATATTCTGTT+TGG | - | chr5.3:10693803-10693822 | None:intergenic | 25.0% |
| ! | TAAAACATTAATAGCAACTG+GGG | + | chr5.3:10695490-10695509 | MS.gene047714:intron | 25.0% |
| ! | TATCATATGCTTGAAATATG+AGG | + | chr5.3:10695295-10695314 | MS.gene047714:intron | 25.0% |
| ! | TATGTTTATAGATTGTTGAC+AGG | + | chr5.3:10696550-10696569 | MS.gene047714:intron | 25.0% |
| ! | TCAGAAATACTTAATAACTG+AGG | - | chr5.3:10693825-10693844 | None:intergenic | 25.0% |
| ! | TGAAGGTTTAAATATGAAAG+TGG | + | chr5.3:10695988-10696007 | MS.gene047714:CDS | 25.0% |
| ! | TGTTTCCTAATTAGTAACAA+CGG | - | chr5.3:10695790-10695809 | None:intergenic | 25.0% |
| ! | TTTAAGAAAACCAAGTATAG+GGG | + | chr5.3:10696361-10696380 | MS.gene047714:CDS | 25.0% |
| ! | TTTCAATTTCTTGCTAATGA+AGG | - | chr5.3:10692909-10692928 | None:intergenic | 25.0% |
| !! | AAAAAGTGTAAAGGAAAACA+AGG | - | chr5.3:10693910-10693929 | None:intergenic | 25.0% |
| !! | AAAAGTGTAAAGGAAAACAA+GGG | - | chr5.3:10693909-10693928 | None:intergenic | 25.0% |
| !! | ATCCTATTTTCATATGTTCA+TGG | + | chr5.3:10694249-10694268 | MS.gene047714:intron | 25.0% |
| !! | CTTTAACTTATACTTTGGTA+TGG | - | chr5.3:10693355-10693374 | None:intergenic | 25.0% |
| !! | TAAGAAATATGGGGATATTT+TGG | + | chr5.3:10693189-10693208 | MS.gene047714:intron | 25.0% |
| !!! | TACAATTTTTCTGAGACTTA+AGG | + | chr5.3:10692952-10692971 | MS.gene047714:intron | 25.0% |
| !!! | TACTTGGTTTTCTTAAAATC+TGG | - | chr5.3:10696358-10696377 | None:intergenic | 25.0% |
| !!! | TTCTGTTTGGCAATATTTTT+TGG | - | chr5.3:10693790-10693809 | None:intergenic | 25.0% |
| AAACAAATGAACAACATACC+TGG | + | chr5.3:10694290-10694309 | MS.gene047714:intron | 30.0% | |
| AAAGTGTAAAGGAAAACAAG+GGG | - | chr5.3:10693908-10693927 | None:intergenic | 30.0% | |
| AATGACTGCTTCATATATTC+TGG | + | chr5.3:10695039-10695058 | MS.gene047714:intron | 30.0% | |
| ACTCAGCAATTCATTAGTTA+GGG | + | chr5.3:10694523-10694542 | MS.gene047714:intron | 30.0% | |
| AGTTTGAAAAGACTCGAATT+TGG | - | chr5.3:10696275-10696294 | None:intergenic | 30.0% | |
| ATCAAAGTAGTCTCTTATCA+TGG | + | chr5.3:10694770-10694789 | MS.gene047714:intron | 30.0% | |
| ATTCAATTAAGTTTGAGCAC+TGG | + | chr5.3:10693579-10693598 | MS.gene047714:CDS | 30.0% | |
| ATTTCTTGCATGATGTTATC+AGG | - | chr5.3:10696638-10696657 | None:intergenic | 30.0% | |
| CTAATCATAGAATTTCAGGA+GGG | + | chr5.3:10692812-10692831 | MS.gene047714:CDS | 30.0% | |
| GAAAACTGTAAAGGAACAAA+TGG | - | chr5.3:10694611-10694630 | None:intergenic | 30.0% | |
| GCATATGTAATAAATCTCTG+AGG | - | chr5.3:10693863-10693882 | None:intergenic | 30.0% | |
| GTTTCCTAATTAGTAACAAC+GGG | - | chr5.3:10695789-10695808 | None:intergenic | 30.0% | |
| TACTCAGCAATTCATTAGTT+AGG | + | chr5.3:10694522-10694541 | MS.gene047714:intron | 30.0% | |
| TCTAATCATAGAATTTCAGG+AGG | + | chr5.3:10692811-10692830 | MS.gene047714:CDS | 30.0% | |
| TGCAACTTAAAAATCTTCCA+TGG | - | chr5.3:10694367-10694386 | None:intergenic | 30.0% | |
| TTGCTTCACTATTGAATGTA+GGG | + | chr5.3:10696171-10696190 | MS.gene047714:intron | 30.0% | |
| TTTATCTCATAATGTCTCAG+AGG | + | chr5.3:10693386-10693405 | MS.gene047714:intron | 30.0% | |
| TTTCATTTCAATAACTGGTC+TGG | + | chr5.3:10695111-10695130 | MS.gene047714:intron | 30.0% | |
| TTTCTTGCATGATGTTATCA+GGG | - | chr5.3:10696637-10696656 | None:intergenic | 30.0% | |
| TTTGCTTCACTATTGAATGT+AGG | + | chr5.3:10696170-10696189 | MS.gene047714:intron | 30.0% | |
| ! | AAGAGGACAAAAAAGTGTAA+AGG | - | chr5.3:10693919-10693938 | None:intergenic | 30.0% |
| ! | ACTGAAATTTGAGGTTAATC+AGG | - | chr5.3:10695263-10695282 | None:intergenic | 30.0% |
| ! | TCATGTTAGTTTCTCTTTAC+AGG | - | chr5.3:10695226-10695245 | None:intergenic | 30.0% |
| ! | TGATAGACATGTCATTGTTT+TGG | - | chr5.3:10695546-10695565 | None:intergenic | 30.0% |
| ! | TGGGTAACATATGTTTCTAA+TGG | + | chr5.3:10693249-10693268 | MS.gene047714:intron | 30.0% |
| ! | TTCATGAGTTGGATATAGTT+GGG | + | chr5.3:10695079-10695098 | MS.gene047714:intron | 30.0% |
| ! | TTGTGAAAGCAGATGTTTTA+TGG | - | chr5.3:10696485-10696504 | None:intergenic | 30.0% |
| !! | CAGTATTTTTGTATCCAGAA+AGG | - | chr5.3:10695680-10695699 | None:intergenic | 30.0% |
| !! | TCTGATTTTGAGAAGAAACT+TGG | + | chr5.3:10696890-10696909 | MS.gene047714:CDS | 30.0% |
| !! | TTGGATTTGCTAATCAGATA+AGG | - | chr5.3:10693696-10693715 | None:intergenic | 30.0% |
| !!! | GGAAGATTTTTAAGTTGCAT+GGG | + | chr5.3:10694368-10694387 | MS.gene047714:CDS | 30.0% |
| !!! | TGGAAGATTTTTAAGTTGCA+TGG | + | chr5.3:10694367-10694386 | MS.gene047714:CDS | 30.0% |
| AAGGCCATACAAAACAAGAA+TGG | - | chr5.3:10696453-10696472 | None:intergenic | 35.0% | |
| AAGTGTAAAGGAAAACAAGG+GGG | - | chr5.3:10693907-10693926 | None:intergenic | 35.0% | |
| AATACTCGAGTATGTTCTTC+TGG | + | chr5.3:10695010-10695029 | MS.gene047714:intron | 35.0% | |
| ACCTAATAAAGTGGACGATA+AGG | + | chr5.3:10693753-10693772 | MS.gene047714:intron | 35.0% | |
| AGCTTCTTAAACATTGAGGT+TGG | - | chr5.3:10694957-10694976 | None:intergenic | 35.0% | |
| AGTTAAGTTCCAACTCAAAG+TGG | + | chr5.3:10693229-10693248 | MS.gene047714:intron | 35.0% | |
| ATAACAGAAAGACAGAAGGA+GGG | - | chr5.3:10696130-10696149 | None:intergenic | 35.0% | |
| ATACTCGAGTATGTTCTTCT+GGG | + | chr5.3:10695011-10695030 | MS.gene047714:intron | 35.0% | |
| ATATGTTACCCACTTTGAGT+TGG | - | chr5.3:10693241-10693260 | None:intergenic | 35.0% | |
| CAGATTCCTTCTTCAATTTC+TGG | - | chr5.3:10696737-10696756 | None:intergenic | 35.0% | |
| CTAACCTCATAATCAGTGAT+TGG | - | chr5.3:10694440-10694459 | None:intergenic | 35.0% | |
| CTAATGGTTAGAGATCATTG+AGG | + | chr5.3:10693265-10693284 | MS.gene047714:intron | 35.0% | |
| CTAGACATGGAAAACTGTAA+AGG | - | chr5.3:10694620-10694639 | None:intergenic | 35.0% | |
| CTTGATCATATCCATTTGAC+CGG | + | chr5.3:10697016-10697035 | MS.gene047714:CDS | 35.0% | |
| GAACAGCTTCTTAAACATTG+AGG | - | chr5.3:10694961-10694980 | None:intergenic | 35.0% | |
| GCAACAGATATACATCAGAA+GGG | + | chr5.3:10695454-10695473 | MS.gene047714:intron | 35.0% | |
| GCTTCATATATTCTGGTAAC+CGG | + | chr5.3:10695046-10695065 | MS.gene047714:intron | 35.0% | |
| GCTTCTTAAACATTGAGGTT+GGG | - | chr5.3:10694956-10694975 | None:intergenic | 35.0% | |
| GGTCAAATGGATATGATCAA+GGG | - | chr5.3:10697017-10697036 | None:intergenic | 35.0% | |
| GTTAAGTTCCAACTCAAAGT+GGG | + | chr5.3:10693230-10693249 | MS.gene047714:intron | 35.0% | |
| TAGGATAACAGAAAGACAGA+AGG | - | chr5.3:10696134-10696153 | None:intergenic | 35.0% | |
| TATAATTACCTGAATCCTGG+CGG | - | chr5.3:10693660-10693679 | None:intergenic | 35.0% | |
| TATTCTTCCATTACAGATCC+CGG | + | chr5.3:10695619-10695638 | MS.gene047714:intron | 35.0% | |
| TCTAGTATTTCATGGTAGAG+AGG | - | chr5.3:10695962-10695981 | None:intergenic | 35.0% | |
| TCTCACTTCTCAAAAATGTG+AGG | + | chr5.3:10694979-10694998 | MS.gene047714:intron | 35.0% | |
| TCTTGCAAACATCACATCTT+GGG | - | chr5.3:10694685-10694704 | None:intergenic | 35.0% | |
| TGCAACAGATATACATCAGA+AGG | + | chr5.3:10695453-10695472 | MS.gene047714:intron | 35.0% | |
| TTACCATAAATCCTGCTACA+GGG | + | chr5.3:10694649-10694668 | MS.gene047714:CDS | 35.0% | |
| TTATAGGTTATCCCAACTTG+AGG | + | chr5.3:10696711-10696730 | MS.gene047714:intron | 35.0% | |
| TTCTTGCAAACATCACATCT+TGG | - | chr5.3:10694686-10694705 | None:intergenic | 35.0% | |
| TTTGGTATGGGATAGATGAT+TGG | - | chr5.3:10693342-10693361 | None:intergenic | 35.0% | |
| ! | AACATGGTGATGATAGGATT+TGG | + | chr5.3:10692848-10692867 | MS.gene047714:CDS | 35.0% |
| ! | ACATGGTGATGATAGGATTT+GGG | + | chr5.3:10692849-10692868 | MS.gene047714:CDS | 35.0% |
| ! | ATGAACAACATACCTGGTTT+TGG | + | chr5.3:10694296-10694315 | MS.gene047714:intron | 35.0% |
| ! | CAGAGAAATTTTCCAAAACC+AGG | - | chr5.3:10694311-10694330 | None:intergenic | 35.0% |
| ! | CAGATGTTTTATGGTTACCT+AGG | - | chr5.3:10696476-10696495 | None:intergenic | 35.0% |
| ! | CTTCATGAGTTGGATATAGT+TGG | + | chr5.3:10695078-10695097 | MS.gene047714:intron | 35.0% |
| ! | GAGGCCTTTAACTTATACTT+TGG | - | chr5.3:10693360-10693379 | None:intergenic | 35.0% |
| ! | GGCTCTAATCATAGAATTTC+AGG | + | chr5.3:10692808-10692827 | MS.gene047714:CDS | 35.0% |
| ! | TGGTTTGCAAAGTTTCTCAA+TGG | + | chr5.3:10692787-10692806 | MS.gene047714:CDS | 35.0% |
| ! | TGTTTTATGGTTACCTAGGA+AGG | - | chr5.3:10696472-10696491 | None:intergenic | 35.0% |
| !!! | ACAGCCATTCTTGTTTTGTA+TGG | + | chr5.3:10696446-10696465 | MS.gene047714:CDS | 35.0% |
| !!! | AGATTTTTAAGTTGCATGGG+AGG | + | chr5.3:10694371-10694390 | MS.gene047714:CDS | 35.0% |
| !!! | ATTTTTAAGTTGCATGGGAG+GGG | + | chr5.3:10694373-10694392 | MS.gene047714:CDS | 35.0% |
| !!! | CATGTCATTGTTTTGGTAAG+AGG | - | chr5.3:10695539-10695558 | None:intergenic | 35.0% |
| !!! | CTTTTTTGTCCTCTTTCTCA+TGG | + | chr5.3:10693924-10693943 | MS.gene047714:intron | 35.0% |
| !!! | GATTTTTAAGTTGCATGGGA+GGG | + | chr5.3:10694372-10694391 | MS.gene047714:CDS | 35.0% |
| !!! | TGAAGGCATTGAATTTTGGA+AGG | - | chr5.3:10695416-10695435 | None:intergenic | 35.0% |
| !!! | TGGTTGAAGGCATTGAATTT+TGG | - | chr5.3:10695420-10695439 | None:intergenic | 35.0% |
| AAATGTCGTCCATGAGAAAG+AGG | - | chr5.3:10693936-10693955 | None:intergenic | 40.0% | |
| AACAGTATTGCCATCGTGAA+AGG | + | chr5.3:10694029-10694048 | MS.gene047714:intron | 40.0% | |
| AAGACTCGAATTTGGAAGCA+AGG | - | chr5.3:10696267-10696286 | None:intergenic | 40.0% | |
| AATTCAATGCCTTCAACCAC+AGG | + | chr5.3:10695421-10695440 | MS.gene047714:intron | 40.0% | |
| AATTGCACTCTCTCTATCAG+AGG | + | chr5.3:10693055-10693074 | MS.gene047714:CDS | 40.0% | |
| ACAGTATTGCCATCGTGAAA+GGG | + | chr5.3:10694030-10694049 | MS.gene047714:intron | 40.0% | |
| AGAAGGAATCTGTCAAGTGT+TGG | + | chr5.3:10696745-10696764 | MS.gene047714:CDS | 40.0% | |
| AGCAGGATTTATGGTAAGGA+CGG | - | chr5.3:10694646-10694665 | None:intergenic | 40.0% | |
| AGTATAGAGCTCATCCTTTC+TGG | + | chr5.3:10695663-10695682 | MS.gene047714:CDS | 40.0% | |
| AGTGTAAAGGAAAACAAGGG+GGG | - | chr5.3:10693906-10693925 | None:intergenic | 40.0% | |
| ATCTCATAATGTCTCAGAGG+AGG | + | chr5.3:10693389-10693408 | MS.gene047714:intron | 40.0% | |
| ATGGAAAAGTTCCGGTCAAA+TGG | - | chr5.3:10697030-10697049 | None:intergenic | 40.0% | |
| ATTCAATGCCTTCAACCACA+GGG | + | chr5.3:10695422-10695441 | MS.gene047714:intron | 40.0% | |
| ATTTCAGGAGGGCAATACAA+TGG | + | chr5.3:10692823-10692842 | MS.gene047714:CDS | 40.0% | |
| CATGCATTATCTCATGAGCT+AGG | - | chr5.3:10696582-10696601 | None:intergenic | 40.0% | |
| CCATCCCGTTGTTACTAATT+AGG | + | chr5.3:10695782-10695801 | MS.gene047714:intron | 40.0% | |
| CCTAATTAGTAACAACGGGA+TGG | - | chr5.3:10695785-10695804 | None:intergenic | 40.0% | |
| CGGTCAAATGGATATGATCA+AGG | - | chr5.3:10697018-10697037 | None:intergenic | 40.0% | |
| CTCATGAGATAATGCATGCA+TGG | + | chr5.3:10696584-10696603 | MS.gene047714:CDS | 40.0% | |
| CTGAAAGGGAAGAAAGTTGT+TGG | + | chr5.3:10693083-10693102 | MS.gene047714:CDS | 40.0% | |
| CTGTAGCAGGATTTATGGTA+AGG | - | chr5.3:10694650-10694669 | None:intergenic | 40.0% | |
| CTTACCATAAATCCTGCTAC+AGG | + | chr5.3:10694648-10694667 | MS.gene047714:CDS | 40.0% | |
| GATAACAGAAAGACAGAAGG+AGG | - | chr5.3:10696131-10696150 | None:intergenic | 40.0% | |
| GATGAGCTCTATACTCAATG+AGG | - | chr5.3:10695658-10695677 | None:intergenic | 40.0% | |
| GATGAGGAAGATGAGAATGT+TGG | + | chr5.3:10693450-10693469 | MS.gene047714:CDS | 40.0% | |
| GCCTTATCGTCCACTTTATT+AGG | - | chr5.3:10693757-10693776 | None:intergenic | 40.0% | |
| GCTAGTTGCACCTAATAAAG+TGG | + | chr5.3:10693744-10693763 | MS.gene047714:intron | 40.0% | |
| GGAAAGACAAGCACTAAATG+AGG | + | chr5.3:10696036-10696055 | MS.gene047714:CDS | 40.0% | |
| GGATAGTCATCATAGTTCAG+TGG | + | chr5.3:10692870-10692889 | MS.gene047714:CDS | 40.0% | |
| GTATTTCATGGTAGAGAGGT+TGG | - | chr5.3:10695958-10695977 | None:intergenic | 40.0% | |
| GTCCCACATTGGATAACAAA+TGG | + | chr5.3:10694863-10694882 | MS.gene047714:intron | 40.0% | |
| GTGTCTAGACTCAGCAATTA+TGG | + | chr5.3:10695919-10695938 | MS.gene047714:CDS | 40.0% | |
| TATCAGAGGAGGATCTGAAA+GGG | + | chr5.3:10693069-10693088 | MS.gene047714:CDS | 40.0% | |
| TCTTCTGCATCATCGAAGAA+GGG | + | chr5.3:10696860-10696879 | MS.gene047714:CDS | 40.0% | |
| TGCATGATGTTATCAGGGAA+CGG | - | chr5.3:10696632-10696651 | None:intergenic | 40.0% | |
| TGGTTATCATGTCTGTGACT+CGG | - | chr5.3:10696394-10696413 | None:intergenic | 40.0% | |
| TGTGTAAAAGAGTCCCACAT+TGG | + | chr5.3:10694852-10694871 | MS.gene047714:intron | 40.0% | |
| TTCTTCGATGATGCAGAAGA+CGG | - | chr5.3:10696860-10696879 | None:intergenic | 40.0% | |
| TTGAGGCCAGAAATTGAAGA+AGG | + | chr5.3:10696728-10696747 | MS.gene047714:CDS | 40.0% | |
| TTGTTGTAGCTGCGAAAGAA+TGG | + | chr5.3:10695730-10695749 | MS.gene047714:CDS | 40.0% | |
| TTTCTAATCTGTGCAGCCAA+AGG | + | chr5.3:10695850-10695869 | MS.gene047714:intron | 40.0% | |
| ! | AACAACGGGATGGAATGTTT+TGG | - | chr5.3:10695775-10695794 | None:intergenic | 40.0% |
| ! | ACAACGGGATGGAATGTTTT+GGG | - | chr5.3:10695774-10695793 | None:intergenic | 40.0% |
| ! | ATGGCAAACATGGTGATGAT+AGG | + | chr5.3:10692842-10692861 | MS.gene047714:CDS | 40.0% |
| ! | CACATTCTTTTCTCCCTCAA+TGG | - | chr5.3:10696062-10696081 | None:intergenic | 40.0% |
| ! | CCTGAACATGTGTTTAGAGT+GGG | + | chr5.3:10694886-10694905 | MS.gene047714:intron | 40.0% |
| ! | CCTTCTAGCTAAAATTCAGC+AGG | + | chr5.3:10693497-10693516 | MS.gene047714:CDS | 40.0% |
| ! | CTATGGAGATGGATTCAGAT+CGG | + | chr5.3:10696955-10696974 | MS.gene047714:CDS | 40.0% |
| ! | CTGAACATGTGTTTAGAGTG+GGG | + | chr5.3:10694887-10694906 | MS.gene047714:intron | 40.0% |
| ! | TATGGAGATGGATTCAGATC+GGG | + | chr5.3:10696956-10696975 | MS.gene047714:CDS | 40.0% |
| ! | TCTGCCAATCACTGATTATG+AGG | + | chr5.3:10694433-10694452 | MS.gene047714:CDS | 40.0% |
| ! | TGAACATGTGTTTAGAGTGG+GGG | + | chr5.3:10694888-10694907 | MS.gene047714:intron | 40.0% |
| ! | TGTCTTTCCACCAAAAGCAT+AGG | - | chr5.3:10696025-10696044 | None:intergenic | 40.0% |
| !! | AGGCCATTTGTTATCCAATG+TGG | - | chr5.3:10694869-10694888 | None:intergenic | 40.0% |
| !! | GGCATTGAATTTTGGAAGGA+AGG | - | chr5.3:10695412-10695431 | None:intergenic | 40.0% |
| !! | GGCCATTTGTTATCCAATGT+GGG | - | chr5.3:10694868-10694887 | None:intergenic | 40.0% |
| !! | GTCTTCCTCAAGTTGATCTT+TGG | - | chr5.3:10693541-10693560 | None:intergenic | 40.0% |
| !! | TCAATTTCTGGCCTCAAGTT+GGG | - | chr5.3:10696725-10696744 | None:intergenic | 40.0% |
| !! | TTCAATTTCTGGCCTCAAGT+TGG | - | chr5.3:10696726-10696745 | None:intergenic | 40.0% |
| !! | TTGTTTTGTATGGCCTTCCT+AGG | + | chr5.3:10696456-10696475 | MS.gene047714:CDS | 40.0% |
| !!! | CCTGCTGAATTTTAGCTAGA+AGG | - | chr5.3:10693500-10693519 | None:intergenic | 40.0% |
| AATTGTGGTGAACTGAGTGC+AGG | + | chr5.3:10692992-10693011 | MS.gene047714:intron | 45.0% | |
| ACACAAAACCCCTTTCACGA+TGG | - | chr5.3:10694042-10694061 | None:intergenic | 45.0% | |
| ACCAGGCGGTACTTAAGTAT+GGG | + | chr5.3:10696981-10697000 | MS.gene047714:CDS | 45.0% | |
| AGAAAACCAAGTATAGGGGC+AGG | + | chr5.3:10696365-10696384 | MS.gene047714:CDS | 45.0% | |
| AGAGAATCTTTGCCATGTCG+AGG | - | chr5.3:10693612-10693631 | None:intergenic | 45.0% | |
| AGATAATGCATGCATGGCTC+AGG | + | chr5.3:10696590-10696609 | MS.gene047714:CDS | 45.0% | |
| AGCACTAAATGAGGCCATTG+AGG | + | chr5.3:10696045-10696064 | MS.gene047714:CDS | 45.0% | |
| ATATATTCTGGTAACCGGCC+TGG | + | chr5.3:10695051-10695070 | MS.gene047714:intron | 45.0% | |
| CACCATTTCCCTGAAACTAG+AGG | + | chr5.3:10696198-10696217 | MS.gene047714:CDS | 45.0% | |
| CAGAGCTCTATTCTGGATCT+GGG | + | chr5.3:10696786-10696805 | MS.gene047714:CDS | 45.0% | |
| CAGTATTGCCATCGTGAAAG+GGG | + | chr5.3:10694031-10694050 | MS.gene047714:intron | 45.0% | |
| CCCACTCTAAACACATGTTC+AGG | - | chr5.3:10694889-10694908 | None:intergenic | 45.0% | |
| CGATCTGAATCCATCTCCAT+AGG | - | chr5.3:10696957-10696976 | None:intergenic | 45.0% | |
| CTAACACAACCCCACAAAAC+CGG | - | chr5.3:10694932-10694951 | None:intergenic | 45.0% | |
| CTATCAGAGGAGGATCTGAA+AGG | + | chr5.3:10693068-10693087 | MS.gene047714:CDS | 45.0% | |
| CTGAGTGCAGGATGATTTGA+CGG | + | chr5.3:10693004-10693023 | MS.gene047714:intron | 45.0% | |
| GAATTAGCCGGGATCTGTAA+TGG | - | chr5.3:10695629-10695648 | None:intergenic | 45.0% | |
| GATGATGAAGACGAAGACGA+AGG | - | chr5.3:10696827-10696846 | None:intergenic | 45.0% | |
| GCACTAAATGAGGCCATTGA+GGG | + | chr5.3:10696046-10696065 | MS.gene047714:CDS | 45.0% | |
| GCCTGAACATGTGTTTAGAG+TGG | + | chr5.3:10694885-10694904 | MS.gene047714:intron | 45.0% | |
| GGGCAATACAATGGCAAACA+TGG | + | chr5.3:10692832-10692851 | MS.gene047714:CDS | 45.0% | |
| GTCTTCTGCATCATCGAAGA+AGG | + | chr5.3:10696859-10696878 | MS.gene047714:CDS | 45.0% | |
| TACCAGGCGGTACTTAAGTA+TGG | + | chr5.3:10696980-10696999 | MS.gene047714:CDS | 45.0% | |
| TCAGAGCTCTATTCTGGATC+TGG | + | chr5.3:10696785-10696804 | MS.gene047714:CDS | 45.0% | |
| TCCAACTCATGAAGAGATCC+AGG | - | chr5.3:10695072-10695091 | None:intergenic | 45.0% | |
| TCTCCCTGTAGCAGGATTTA+TGG | - | chr5.3:10694655-10694674 | None:intergenic | 45.0% | |
| TGATTGGCAGATGACAAGCA+TGG | - | chr5.3:10694424-10694443 | None:intergenic | 45.0% | |
| TGCTTTCACAATCTAGCGCT+TGG | + | chr5.3:10696494-10696513 | MS.gene047714:intron | 45.0% | |
| TGGTACTGTGGAACAGATCA+TGG | + | chr5.3:10695131-10695150 | MS.gene047714:intron | 45.0% | |
| TGTTGCATTCATACTCCCTG+TGG | - | chr5.3:10695440-10695459 | None:intergenic | 45.0% | |
| TTCATACTCCCTGTGGTTGA+AGG | - | chr5.3:10695433-10695452 | None:intergenic | 45.0% | |
| TTGGAAGCAAGGAATCCCTA+CGG | - | chr5.3:10696256-10696275 | None:intergenic | 45.0% | |
| TTGTAGCTGCGAAAGAATGG+AGG | + | chr5.3:10695733-10695752 | MS.gene047714:CDS | 45.0% | |
| TTTCTCTGCAGAATCTGTGC+TGG | + | chr5.3:10694323-10694342 | MS.gene047714:intron | 45.0% | |
| ! | AAGCAGAGTCCTCTAGTTTC+AGG | - | chr5.3:10696210-10696229 | None:intergenic | 45.0% |
| ! | AGCAGAGTCCTCTAGTTTCA+GGG | - | chr5.3:10696209-10696228 | None:intergenic | 45.0% |
| ! | CAATAACTGGTCTGGTACTG+TGG | + | chr5.3:10695119-10695138 | MS.gene047714:intron | 45.0% |
| ! | GCAAGTTCCTATGCTTTTGG+TGG | + | chr5.3:10696015-10696034 | MS.gene047714:CDS | 45.0% |
| ! | GCAGCAAGTTCCTATGCTTT+TGG | + | chr5.3:10696012-10696031 | MS.gene047714:CDS | 45.0% |
| ! | GTCCTCTAGTTTCAGGGAAA+TGG | - | chr5.3:10696203-10696222 | None:intergenic | 45.0% |
| ! | GTGAGGTATCTGACTCAATC+TGG | - | chr5.3:10696931-10696950 | None:intergenic | 45.0% |
| ! | TGCAAGCAACAAGTGTTGTG+TGG | + | chr5.3:10695582-10695601 | MS.gene047714:intron | 45.0% |
| !! | CCTCAAGTTGATCTTTGGCA+CGG | - | chr5.3:10693536-10693555 | None:intergenic | 45.0% |
| !! | GTCAAGTGTTGGCTCATATG+TGG | + | chr5.3:10696756-10696775 | MS.gene047714:CDS | 45.0% |
| AACAAACCGTCACCACCGTA+GGG | + | chr5.3:10696238-10696257 | MS.gene047714:intron | 50.0% | |
| ACGGGTCAGTCTATAAGGCT+TGG | - | chr5.3:10696414-10696433 | None:intergenic | 50.0% | |
| ACTCATGAAGAGATCCAGGC+CGG | - | chr5.3:10695068-10695087 | None:intergenic | 50.0% | |
| AGGAAGACGAGCAACTTGCA+AGG | + | chr5.3:10693553-10693572 | MS.gene047714:CDS | 50.0% | |
| ATGAGGCCAGCTGAATTAGC+CGG | - | chr5.3:10695641-10695660 | None:intergenic | 50.0% | |
| ATTCAGATCGGGTTACCAGG+CGG | + | chr5.3:10696967-10696986 | MS.gene047714:CDS | 50.0% | |
| CATCGACGGGTCAGTCTATA+AGG | - | chr5.3:10696419-10696438 | None:intergenic | 50.0% | |
| CATGCATGGCTCAGGCTTAA+AGG | + | chr5.3:10696598-10696617 | MS.gene047714:CDS | 50.0% | |
| CCGTGCCAAAGATCAACTTG+AGG | + | chr5.3:10693533-10693552 | MS.gene047714:CDS | 50.0% | |
| CTGAATCCATCTCCATAGGC+TGG | - | chr5.3:10696953-10696972 | None:intergenic | 50.0% | |
| CTTTCGCAGCTACAACAACG+AGG | - | chr5.3:10695728-10695747 | None:intergenic | 50.0% | |
| GAATCTTTGCCATGTCGAGG+AGG | - | chr5.3:10693609-10693628 | None:intergenic | 50.0% | |
| GATGAAGACGAAGACGAAGG+CGG | - | chr5.3:10696824-10696843 | None:intergenic | 50.0% | |
| GCAGATGACAAGCATGGCAT+TGG | - | chr5.3:10694418-10694437 | None:intergenic | 50.0% | |
| GCCTGGATCTCTTCATGAGT+TGG | + | chr5.3:10695068-10695087 | MS.gene047714:intron | 50.0% | |
| GCTGCAATGTACGTATGCTC+TGG | + | chr5.3:10694811-10694830 | MS.gene047714:intron | 50.0% | |
| GCTGGATGCAATGCTGAGAT+TGG | + | chr5.3:10694341-10694360 | MS.gene047714:CDS | 50.0% | |
| GGAAGACGAGCAACTTGCAA+GGG | + | chr5.3:10693554-10693573 | MS.gene047714:CDS | 50.0% | |
| GTAAGGACGGTTGCTAGACA+TGG | - | chr5.3:10694633-10694652 | None:intergenic | 50.0% | |
| TCAGATACCTCACCAGCCTA+TGG | + | chr5.3:10696938-10696957 | MS.gene047714:CDS | 50.0% | |
| TGCACTCTCTCTATCAGAGG+AGG | + | chr5.3:10693058-10693077 | MS.gene047714:CDS | 50.0% | |
| TGCTGTCGAGCTCATGTGTT+GGG | - | chr5.3:10695703-10695722 | None:intergenic | 50.0% | |
| TGGATTCAGATCGGGTTACC+AGG | + | chr5.3:10696964-10696983 | MS.gene047714:CDS | 50.0% | |
| TTCGATGATGCAGAAGACGG+CGG | - | chr5.3:10696857-10696876 | None:intergenic | 50.0% | |
| ! | TGCAATGCTGAGATTGGCCA+TGG | + | chr5.3:10694347-10694366 | MS.gene047714:CDS | 50.0% |
| !! | ACCTCACAAGCCGGTTTTGT+GGG | + | chr5.3:10694919-10694938 | MS.gene047714:intron | 50.0% |
| !! | CGGTTTTGTGGGGTTGTGTT+AGG | + | chr5.3:10694930-10694949 | MS.gene047714:intron | 50.0% |
| !! | GCATGGCATTGGAAGCATTG+TGG | - | chr5.3:10694407-10694426 | None:intergenic | 50.0% |
| AATCCTGGCGGAAAGAGGTG+GGG | - | chr5.3:10693648-10693667 | None:intergenic | 55.0% | |
| ACCTCACCAGCCTATGGAGA+TGG | + | chr5.3:10696944-10696963 | MS.gene047714:CDS | 55.0% | |
| ACCTCTTTCCGCCAGGATTC+AGG | + | chr5.3:10693649-10693668 | MS.gene047714:CDS | 55.0% | |
| ACCTGAATCCTGGCGGAAAG+AGG | - | chr5.3:10693653-10693672 | None:intergenic | 55.0% | |
| AGGAATCCCTACGGTGGTGA+CGG | - | chr5.3:10696247-10696266 | None:intergenic | 55.0% | |
| CAGATCCCGGCTAATTCAGC+TGG | + | chr5.3:10695632-10695651 | MS.gene047714:intron | 55.0% | |
| GAACAAACCGTCACCACCGT+AGG | + | chr5.3:10696237-10696256 | MS.gene047714:intron | 55.0% | |
| GAAGCAAGGAATCCCTACGG+TGG | - | chr5.3:10696253-10696272 | None:intergenic | 55.0% | |
| GAATCCTGGCGGAAAGAGGT+GGG | - | chr5.3:10693649-10693668 | None:intergenic | 55.0% | |
| GCAATCCTCACCTCACAAGC+CGG | + | chr5.3:10694910-10694929 | MS.gene047714:intron | 55.0% | |
| GTGATGCTTCTCCCTGTAGC+AGG | - | chr5.3:10694663-10694682 | None:intergenic | 55.0% | |
| GTGCTGTCGAGCTCATGTGT+TGG | - | chr5.3:10695704-10695723 | None:intergenic | 55.0% | |
| TAAGTTGCATGGGAGGGGTC+TGG | + | chr5.3:10694378-10694397 | MS.gene047714:CDS | 55.0% | |
| TCCATCTCCATAGGCTGGTG+AGG | - | chr5.3:10696948-10696967 | None:intergenic | 55.0% | |
| TGAATCCTGGCGGAAAGAGG+TGG | - | chr5.3:10693650-10693669 | None:intergenic | 55.0% | |
| TGAGGCCAGCTGAATTAGCC+GGG | - | chr5.3:10695640-10695659 | None:intergenic | 55.0% | |
| ! | ACTGGTTCTCCTCCTCGACA+TGG | + | chr5.3:10693597-10693616 | MS.gene047714:CDS | 55.0% |
| ! | GCCCATACTTAAGTACCGCC+TGG | - | chr5.3:10696985-10697004 | None:intergenic | 55.0% |
| ! | TGGCTGTCACTTCGCATCGA+CGG | - | chr5.3:10696433-10696452 | None:intergenic | 55.0% |
| !! | CAAAACCGGCTTGTGAGGTG+AGG | - | chr5.3:10694918-10694937 | None:intergenic | 55.0% |
| !! | CACCTCACAAGCCGGTTTTG+TGG | + | chr5.3:10694918-10694937 | MS.gene047714:intron | 55.0% |
| !! | CCTCACAAGCCGGTTTTGTG+GGG | + | chr5.3:10694920-10694939 | MS.gene047714:intron | 55.0% |
| CGGTGTCCTGCCCCTATACT+TGG | - | chr5.3:10696374-10696393 | None:intergenic | 60.0% | |
| ! | GGCTGTCACTTCGCATCGAC+GGG | - | chr5.3:10696432-10696451 | None:intergenic | 60.0% |
| !! | CCCCACAAAACCGGCTTGTG+AGG | - | chr5.3:10694923-10694942 | None:intergenic | 60.0% |
| GGCGGAAAGAGGTGGGGAGA+AGG | - | chr5.3:10693642-10693661 | None:intergenic | 65.0% | |
| TCTCCCCACCTCTTTCCGCC+AGG | + | chr5.3:10693642-10693661 | MS.gene047714:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 10692781 | 10697054 | 10692781 | ID=MS.gene047714 |
| chr5.3 | mRNA | 10692781 | 10697054 | 10692781 | ID=MS.gene047714.t1;Parent=MS.gene047714 |
| chr5.3 | exon | 10692781 | 10692891 | 10692781 | ID=MS.gene047714.t1.exon1;Parent=MS.gene047714.t1 |
| chr5.3 | CDS | 10692781 | 10692891 | 10692781 | ID=cds.MS.gene047714.t1;Parent=MS.gene047714.t1 |
| chr5.3 | exon | 10693014 | 10693104 | 10693014 | ID=MS.gene047714.t1.exon2;Parent=MS.gene047714.t1 |
| chr5.3 | CDS | 10693014 | 10693104 | 10693014 | ID=cds.MS.gene047714.t1;Parent=MS.gene047714.t1 |
| chr5.3 | exon | 10693406 | 10693670 | 10693406 | ID=MS.gene047714.t1.exon3;Parent=MS.gene047714.t1 |
| chr5.3 | CDS | 10693406 | 10693670 | 10693406 | ID=cds.MS.gene047714.t1;Parent=MS.gene047714.t1 |
| chr5.3 | exon | 10694334 | 10694454 | 10694334 | ID=MS.gene047714.t1.exon4;Parent=MS.gene047714.t1 |
| chr5.3 | CDS | 10694334 | 10694454 | 10694334 | ID=cds.MS.gene047714.t1;Parent=MS.gene047714.t1 |
| chr5.3 | exon | 10694626 | 10694709 | 10694626 | ID=MS.gene047714.t1.exon5;Parent=MS.gene047714.t1 |
| chr5.3 | CDS | 10694626 | 10694709 | 10694626 | ID=cds.MS.gene047714.t1;Parent=MS.gene047714.t1 |
| chr5.3 | exon | 10695635 | 10695754 | 10695635 | ID=MS.gene047714.t1.exon6;Parent=MS.gene047714.t1 |
| chr5.3 | CDS | 10695635 | 10695754 | 10695635 | ID=cds.MS.gene047714.t1;Parent=MS.gene047714.t1 |
| chr5.3 | exon | 10695866 | 10696078 | 10695866 | ID=MS.gene047714.t1.exon7;Parent=MS.gene047714.t1 |
| chr5.3 | CDS | 10695866 | 10696078 | 10695866 | ID=cds.MS.gene047714.t1;Parent=MS.gene047714.t1 |
| chr5.3 | exon | 10696192 | 10696254 | 10696192 | ID=MS.gene047714.t1.exon8;Parent=MS.gene047714.t1 |
| chr5.3 | CDS | 10696192 | 10696254 | 10696192 | ID=cds.MS.gene047714.t1;Parent=MS.gene047714.t1 |
| chr5.3 | exon | 10696359 | 10696477 | 10696359 | ID=MS.gene047714.t1.exon9;Parent=MS.gene047714.t1 |
| chr5.3 | CDS | 10696359 | 10696477 | 10696359 | ID=cds.MS.gene047714.t1;Parent=MS.gene047714.t1 |
| chr5.3 | exon | 10696561 | 10696619 | 10696561 | ID=MS.gene047714.t1.exon10;Parent=MS.gene047714.t1 |
| chr5.3 | CDS | 10696561 | 10696619 | 10696561 | ID=cds.MS.gene047714.t1;Parent=MS.gene047714.t1 |
| chr5.3 | exon | 10696717 | 10697054 | 10696717 | ID=MS.gene047714.t1.exon11;Parent=MS.gene047714.t1 |
| chr5.3 | CDS | 10696717 | 10697054 | 10696717 | ID=cds.MS.gene047714.t1;Parent=MS.gene047714.t1 |
| Gene Sequence |
| Protein sequence |
