AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene047723

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene047723.t1 MTR_5g019030 85.279 394 10 1 1 346 241 634 0.0 677
MS.gene047723.t1 MTR_5g019040 76.371 237 10 1 346 536 185 421 3.13e-112 346
MS.gene047723.t1 MTR_8g078300 45.714 245 70 6 348 536 180 417 2.26e-50 182
MS.gene047723.t1 MTR_5g019050 42.636 129 71 2 408 536 334 459 3.28e-24 107
MS.gene047723.t1 MTR_5g042440 47.581 124 58 2 413 535 331 448 6.59e-24 106
MS.gene047723.t1 MTR_1g021845 42.975 121 61 3 418 536 332 446 1.56e-21 99.0
MS.gene047723.t1 MTR_8g070050 28.251 223 154 4 122 343 5 222 5.44e-21 92.0
MS.gene047723.t1 MTR_5g085790 42.975 121 66 2 417 535 342 461 2.88e-20 95.1
MS.gene047723.t1 MTR_3g080170 42.149 121 63 4 417 535 344 459 3.94e-20 94.7
MS.gene047723.t1 MTR_6g072030 25.269 372 207 10 10 320 228 589 3.49e-16 82.0
MS.gene047723.t1 MTR_6g072030 24.699 332 213 10 3 325 186 489 2.80e-13 72.8
MS.gene047723.t1 MTR_0014s0250 25.740 338 206 10 10 334 201 506 4.63e-16 81.6
MS.gene047723.t1 MTR_3g448620 25.148 338 225 9 10 343 196 509 5.66e-16 81.3
MS.gene047723.t1 MTR_3g037490 32.192 146 95 2 175 320 101 242 6.21e-16 81.3
MS.gene047723.t1 MTR_3g037490 31.343 134 92 0 204 337 196 329 2.18e-15 79.3
MS.gene047723.t1 MTR_3g037490 23.438 384 217 11 6 325 87 457 7.45e-13 71.6
MS.gene047723.t1 MTR_3g105900 25.466 322 209 7 10 325 308 604 7.93e-16 81.6
MS.gene047723.t1 MTR_3g105900 25.806 217 155 2 122 337 230 441 3.74e-14 76.3
MS.gene047723.t1 MTR_3g105900 23.507 268 183 5 97 359 101 351 7.27e-13 72.0
MS.gene047723.t1 MTR_3g105900 26.316 209 139 4 123 328 832 1028 7.75e-12 68.9
MS.gene047723.t1 MTR_6g077540 23.077 364 210 9 10 330 227 563 9.17e-16 80.5
MS.gene047723.t1 MTR_8g070060 27.397 219 141 5 122 339 446 647 1.08e-15 80.5
MS.gene047723.t1 MTR_3g045420 23.913 230 171 1 99 328 379 604 1.49e-15 80.5
MS.gene047723.t1 MTR_6g079920 25.364 343 216 9 10 342 228 540 2.22e-15 79.3
MS.gene047723.t1 MTR_5g033490 37.692 130 69 4 415 536 293 418 7.68e-15 77.8
MS.gene047723.t1 MTR_6g478210 24.458 323 207 9 10 319 45 343 1.05e-14 76.3
MS.gene047723.t1 MTR_6g478210 29.508 122 86 0 204 325 80 201 7.18e-13 70.5
MS.gene047723.t1 MTR_0019s0210 25.360 347 213 10 10 343 206 519 1.11e-14 77.4
MS.gene047723.t1 MTR_5g029690 31.624 117 80 0 204 320 254 370 1.60e-14 77.0
MS.gene047723.t1 MTR_5g029690 20.723 415 228 12 10 330 289 696 6.12e-13 72.0
MS.gene047723.t1 MTR_5g029690 23.963 217 157 5 118 330 133 345 4.28e-11 66.2
MS.gene047723.t1 MTR_5g029690 30.597 134 93 0 204 337 324 457 5.69e-11 65.9
MS.gene047723.t1 MTR_6g079960 24.036 337 215 9 10 325 206 522 2.09e-14 76.6
MS.gene047723.t1 MTR_6g079960 28.319 113 80 1 193 305 196 307 2.14e-11 67.0
MS.gene047723.t1 MTR_7g029650 35.156 128 71 5 419 535 339 465 2.23e-14 76.6
MS.gene047723.t1 MTR_5g086130 36.667 150 77 5 395 536 286 425 2.42e-14 76.3
MS.gene047723.t1 MTR_5g086130 36.667 150 77 5 395 536 288 427 2.42e-14 76.3
MS.gene047723.t1 MTR_1g112240 29.630 135 95 0 204 338 245 379 2.84e-14 75.9
MS.gene047723.t1 MTR_1g112240 24.457 184 135 2 137 320 217 396 2.78e-13 72.8
MS.gene047723.t1 MTR_6g079890 24.316 329 212 9 10 325 181 485 2.99e-14 75.9
MS.gene047723.t1 MTR_6g079890 27.407 135 98 0 204 338 216 350 1.03e-12 70.9
MS.gene047723.t1 MTR_6g077800 27.344 128 93 0 201 328 227 354 3.02e-14 75.5
MS.gene047723.t1 MTR_6g077800 24.766 214 153 3 122 333 257 464 7.51e-12 68.2
MS.gene047723.t1 MTR_6g045263 22.424 330 223 7 6 328 205 508 4.06e-14 75.5
MS.gene047723.t1 MTR_6g079590 24.924 329 220 8 1 325 196 501 4.50e-14 75.5
MS.gene047723.t1 MTR_6g045263 22.424 330 223 7 6 328 181 484 4.86e-14 75.1
MS.gene047723.t1 MTR_6g069840 28.641 206 143 2 120 325 279 480 5.01e-14 75.1
MS.gene047723.t1 MTR_6g069840 27.273 143 104 0 201 343 216 358 3.08e-11 66.2
MS.gene047723.t1 MTR_6g069840 31.148 122 84 0 204 325 254 375 5.78e-11 65.5
MS.gene047723.t1 MTR_8g107050 24.507 355 212 10 3 321 191 525 5.58e-14 75.5
MS.gene047723.t1 MTR_8g107050 23.476 328 190 10 3 325 327 598 2.86e-12 69.7
MS.gene047723.t1 MTR_8g107050 24.507 355 212 10 3 321 191 525 5.93e-14 75.1
MS.gene047723.t1 MTR_8g107050 23.476 328 190 10 3 325 327 598 3.04e-12 69.7
MS.gene047723.t1 MTR_0014s0180 32.026 153 100 2 176 328 355 503 7.12e-14 74.7
MS.gene047723.t1 MTR_1g068960 25.366 205 133 2 129 325 239 431 7.22e-14 75.1
MS.gene047723.t1 MTR_1g068960 28.994 169 111 3 168 331 453 617 7.41e-14 75.1
MS.gene047723.t1 MTR_8g105170 22.154 325 226 6 10 330 385 686 7.64e-14 75.1
MS.gene047723.t1 MTR_8g105170 23.445 209 156 1 122 330 307 511 1.82e-11 67.4
MS.gene047723.t1 MTR_6g069840 29.000 200 138 2 126 325 301 496 9.13e-14 74.3
MS.gene047723.t1 MTR_6g069840 27.273 143 104 0 201 343 232 374 2.64e-11 66.6
MS.gene047723.t1 MTR_6g069840 31.148 122 84 0 204 325 270 391 5.69e-11 65.5
MS.gene047723.t1 MTR_6g081920 26.627 169 120 1 157 325 236 400 9.30e-14 73.9
MS.gene047723.t1 MTR_7g044790 22.174 230 141 5 97 325 88 280 1.00e-13 74.3
MS.gene047723.t1 MTR_1g048080 29.050 179 121 4 149 326 570 743 1.05e-13 74.7
MS.gene047723.t1 MTR_7g012890 29.282 181 123 3 163 343 340 515 1.23e-13 73.9
MS.gene047723.t1 MTR_5g086030 36.709 158 81 6 390 536 296 445 1.35e-13 73.9
MS.gene047723.t1 MTR_4g108060 21.307 352 223 7 2 334 61 377 1.48e-13 73.2
MS.gene047723.t1 MTR_6g478130 25.446 224 162 3 120 343 154 372 1.86e-13 72.8
MS.gene047723.t1 MTR_8g107230 21.028 214 166 1 85 298 58 268 1.92e-13 73.2
MS.gene047723.t1 MTR_5g031740 24.925 333 210 8 10 336 508 806 2.11e-13 73.6
MS.gene047723.t1 MTR_5g031740 27.344 128 93 0 201 328 435 562 4.30e-12 69.3
MS.gene047723.t1 MTR_5g031740 29.008 131 93 0 204 334 368 498 3.52e-11 66.6
MS.gene047723.t1 MTR_5g031740 21.339 239 161 4 107 325 83 314 7.93e-11 65.5
MS.gene047723.t1 MTR_0573s0020 25.446 224 162 3 120 343 19 237 2.30e-13 70.9
MS.gene047723.t1 MTR_6g078190 22.581 248 160 3 126 342 176 422 2.65e-13 72.8
MS.gene047723.t1 MTR_4g108060 21.307 352 223 7 2 334 195 511 3.03e-13 72.8
MS.gene047723.t1 MTR_6g478220 27.273 165 108 3 163 319 11 171 3.63e-13 68.6
MS.gene047723.t1 MTR_3g114700 21.759 216 164 1 113 328 129 339 3.73e-13 72.4
MS.gene047723.t1 MTR_7g118240 25.847 236 159 4 97 325 45 271 4.03e-13 72.0
MS.gene047723.t1 MTR_2g102210 23.793 290 189 2 79 336 77 366 4.89e-13 72.0
MS.gene047723.t1 MTR_2g102210 23.423 333 230 7 1 328 292 604 2.06e-12 70.1
MS.gene047723.t1 MTR_1g055295 30.000 130 90 1 197 325 864 993 4.90e-13 72.4
MS.gene047723.t1 MTR_1g055295 23.013 239 179 3 102 339 176 410 8.76e-13 71.6
MS.gene047723.t1 MTR_1g050495 28.676 136 97 0 204 339 236 371 5.05e-13 72.0
MS.gene047723.t1 MTR_6g069170 24.880 209 140 4 126 319 119 325 5.51e-13 70.9
MS.gene047723.t1 MTR_0014s0260 28.814 118 84 0 204 321 207 324 5.52e-13 71.6
MS.gene047723.t1 MTR_6g079380 21.676 346 216 8 10 343 211 513 5.90e-13 71.6
MS.gene047723.t1 MTR_2g016740 22.951 244 181 4 83 325 37 274 6.33e-13 71.6
MS.gene047723.t1 MTR_1g045880 22.796 329 223 8 3 325 248 551 6.80e-13 71.6
MS.gene047723.t1 MTR_4g021220 21.028 214 164 2 113 325 56 265 7.65e-13 71.2
MS.gene047723.t1 MTR_6g069200 29.008 131 93 0 204 334 33 163 7.77e-13 68.2
MS.gene047723.t1 MTR_6g079180 22.490 249 161 3 126 343 111 358 8.96e-13 70.5
MS.gene047723.t1 MTR_6g079180 26.866 134 96 1 204 335 80 213 1.14e-11 67.0
MS.gene047723.t1 MTR_4g068360 22.350 349 245 9 1 328 211 554 9.07e-13 71.2
MS.gene047723.t1 MTR_6g069300 24.260 338 228 8 10 343 207 520 1.09e-12 70.9
MS.gene047723.t1 MTR_6g079210 22.490 249 161 3 126 343 111 358 1.11e-12 70.1
MS.gene047723.t1 MTR_6g079210 26.866 134 96 1 204 335 80 213 1.63e-11 66.6
MS.gene047723.t1 MTR_3g034990 22.599 354 228 7 3 343 204 524 1.12e-12 70.9
MS.gene047723.t1 MTR_5g008300 22.727 198 149 1 122 319 401 594 1.25e-12 71.2
MS.gene047723.t1 MTR_5g008300 22.096 353 246 8 5 335 715 1060 8.32e-12 68.9
MS.gene047723.t1 MTR_5g008300 29.600 125 88 0 204 328 374 498 1.20e-11 68.2
MS.gene047723.t1 MTR_6g079830 27.407 135 98 0 204 338 263 397 1.51e-12 70.5
MS.gene047723.t1 MTR_8g014500 34.615 130 73 4 415 536 341 466 1.52e-12 70.5
MS.gene047723.t1 MTR_4g074390 21.023 352 224 7 2 334 195 511 1.62e-12 70.5
MS.gene047723.t1 MTR_6g078210 24.638 207 148 2 126 330 281 481 1.83e-12 70.1
MS.gene047723.t1 MTR_6g078210 22.388 335 238 7 10 343 215 528 5.00e-12 68.9
MS.gene047723.t1 MTR_4g040410 26.531 147 104 1 204 346 302 448 1.89e-12 70.1
MS.gene047723.t1 MTR_8g014500 34.615 130 73 4 415 536 341 466 1.94e-12 70.1
MS.gene047723.t1 MTR_8g014500 34.615 130 73 4 415 536 341 466 2.20e-12 70.1
MS.gene047723.t1 MTR_5g095130 22.086 326 214 6 10 325 346 641 2.83e-12 70.1
MS.gene047723.t1 MTR_5g095130 20.866 254 195 3 78 330 84 332 1.93e-11 67.4
MS.gene047723.t1 MTR_8g054410 29.114 158 108 2 168 325 358 511 3.12e-12 69.7
MS.gene047723.t1 MTR_8g054410 27.737 137 94 1 203 334 354 490 9.62e-11 65.1
MS.gene047723.t1 MTR_6g079240 23.145 337 231 7 10 342 45 357 3.15e-12 69.3
MS.gene047723.t1 MTR_6g079240 23.582 335 203 11 2 319 72 370 5.44e-12 68.6
MS.gene047723.t1 MTR_6g079310 23.167 341 226 8 10 342 157 469 3.15e-12 69.3
MS.gene047723.t1 MTR_6g079310 23.582 335 203 11 2 319 184 482 5.67e-12 68.6
MS.gene047723.t1 MTR_6g079250 22.388 335 238 7 10 343 45 358 3.29e-12 68.9
MS.gene047723.t1 MTR_7g060720 26.087 184 131 2 148 330 141 320 3.44e-12 69.3
MS.gene047723.t1 MTR_2g069680 21.813 353 223 8 10 328 86 419 3.49e-12 68.9
MS.gene047723.t1 MTR_2g039290 31.977 172 100 5 376 535 783 949 3.61e-12 69.7
MS.gene047723.t1 MTR_4g091600 23.615 343 210 10 10 336 154 460 3.76e-12 69.7
MS.gene047723.t1 MTR_6g022260 23.529 323 220 6 10 328 237 536 3.82e-12 69.3
MS.gene047723.t1 MTR_1g080110 24.571 350 225 10 4 325 213 551 3.86e-12 69.3
MS.gene047723.t1 MTR_5g090170 22.257 319 219 9 10 323 410 704 4.04e-12 69.3
MS.gene047723.t1 MTR_5g090170 21.429 252 195 1 79 330 46 294 4.11e-11 66.2
MS.gene047723.t1 MTR_5g077930 23.887 247 177 3 96 339 196 434 4.15e-12 69.3
MS.gene047723.t1 MTR_5g077930 23.197 319 224 6 3 320 257 555 8.16e-11 65.5
MS.gene047723.t1 MTR_2g069680 22.000 350 226 8 10 328 211 544 4.18e-12 68.9
MS.gene047723.t1 MTR_6g445300 23.729 236 144 4 126 325 208 443 4.31e-12 68.6
MS.gene047723.t1 MTR_4g108650 23.000 200 150 2 126 325 110 305 4.71e-12 69.3
MS.gene047723.t1 MTR_4g108650 22.699 326 218 10 3 320 36 335 4.10e-11 66.2
MS.gene047723.t1 MTR_1g031720 27.941 204 143 1 122 325 307 506 4.86e-12 69.3
MS.gene047723.t1 MTR_5g090170 22.327 318 218 9 10 322 410 703 5.10e-12 69.3
MS.gene047723.t1 MTR_5g090170 21.429 252 195 1 79 330 46 294 4.86e-11 65.9
MS.gene047723.t1 MTR_3g061020 26.374 182 130 1 153 334 184 361 5.33e-12 68.2
MS.gene047723.t1 MTR_4g081655 36.923 130 64 6 418 535 527 650 5.63e-12 68.9
MS.gene047723.t1 MTR_1g033960 23.547 327 225 8 2 325 259 563 5.76e-12 68.9
MS.gene047723.t1 MTR_1g033960 23.167 341 228 11 10 325 197 528 7.67e-12 68.6
MS.gene047723.t1 MTR_1g033960 24.651 215 157 3 114 328 182 391 1.35e-11 67.8
MS.gene047723.t1 MTR_4g081655 36.923 130 64 6 418 535 527 650 5.83e-12 68.9
MS.gene047723.t1 MTR_2g039290 31.977 172 100 5 376 535 1005 1171 6.00e-12 69.3
MS.gene047723.t1 MTR_2g039290 31.977 172 100 5 376 535 1017 1183 6.01e-12 69.3
MS.gene047723.t1 MTR_2g035630 27.027 185 96 4 176 325 352 532 6.35e-12 68.6
MS.gene047723.t1 MTR_4g081655 36.923 130 64 6 418 535 492 615 6.38e-12 68.9
MS.gene047723.t1 MTR_0237s0070 26.984 189 127 3 157 342 468 648 6.49e-12 68.6
MS.gene047723.t1 MTR_7g405940 22.691 379 225 13 23 338 103 476 7.80e-12 68.6
MS.gene047723.t1 MTR_1g045850 22.541 244 158 2 126 338 219 462 8.72e-12 67.8
MS.gene047723.t1 MTR_4g107180 28.244 131 94 0 204 334 271 401 9.57e-12 67.4
MS.gene047723.t1 MTR_4g014900 36.585 123 60 5 426 536 158 274 9.61e-12 67.0
MS.gene047723.t1 MTR_4g014900 36.585 123 60 5 426 536 158 274 9.76e-12 67.8
MS.gene047723.t1 MTR_0110s0060 26.404 178 127 1 157 334 330 503 1.05e-11 67.8
MS.gene047723.t1 MTR_4g014900 36.585 123 60 5 426 536 158 274 1.16e-11 67.0
MS.gene047723.t1 MTR_7g011500 22.182 275 181 8 79 328 51 317 1.31e-11 67.8
MS.gene047723.t1 MTR_1g013040 36.585 123 60 5 426 536 153 269 1.38e-11 67.0
MS.gene047723.t1 MTR_3g008430 29.032 124 87 1 204 326 318 441 1.39e-11 67.4
MS.gene047723.t1 MTR_1g013040 36.585 123 60 5 426 536 153 269 1.45e-11 67.0
MS.gene047723.t1 MTR_6g078160 23.311 296 192 8 10 297 199 467 1.52e-11 67.4
MS.gene047723.t1 MTR_8g071970 23.333 210 155 2 120 328 554 758 1.56e-11 67.8
MS.gene047723.t1 MTR_2g036560 27.879 165 115 2 164 328 415 575 1.60e-11 67.8
MS.gene047723.t1 MTR_3g100600 23.288 292 177 7 79 328 80 366 1.93e-11 67.0
MS.gene047723.t1 MTR_6g061120 24.878 205 150 2 126 330 133 333 1.95e-11 66.6
MS.gene047723.t1 MTR_6g005000 24.413 213 150 5 115 321 247 454 2.08e-11 67.0
MS.gene047723.t1 MTR_0308s0020 28.689 122 87 0 204 325 267 388 2.14e-11 66.6
MS.gene047723.t1 MTR_6g471100 25.628 199 98 4 204 361 456 645 2.21e-11 67.0
MS.gene047723.t1 MTR_4g115630 34.302 172 82 6 377 535 173 326 2.35e-11 66.6
MS.gene047723.t1 MTR_4g094245 25.641 234 163 6 93 320 68 296 2.63e-11 66.2
MS.gene047723.t1 MTR_5g023980 38.144 97 48 3 448 537 123 214 3.31e-11 64.7
MS.gene047723.t1 MTR_2g437460 22.186 311 208 6 61 345 51 353 3.53e-11 66.2
MS.gene047723.t1 MTR_2g026635 24.028 283 191 7 47 328 158 417 3.63e-11 66.2
MS.gene047723.t1 MTR_2g022810 37.302 126 61 5 424 536 72 192 4.00e-11 65.5
MS.gene047723.t1 MTR_6g069180 29.341 167 113 3 176 342 355 516 4.18e-11 65.9
MS.gene047723.t1 MTR_6g069180 29.508 122 86 0 204 325 414 535 6.69e-11 65.1
MS.gene047723.t1 MTR_6g079290 25.000 152 87 1 204 328 13 164 4.19e-11 64.3
MS.gene047723.t1 MTR_7g085100 22.018 327 206 9 50 339 91 405 4.29e-11 65.9
MS.gene047723.t1 MTR_3g104660 32.576 132 67 5 415 535 399 519 4.60e-11 65.9
MS.gene047723.t1 MTR_8g089700 22.493 369 201 10 10 328 153 486 4.70e-11 65.5
MS.gene047723.t1 MTR_8g101300 33.594 128 68 5 419 535 457 578 4.75e-11 66.2
MS.gene047723.t1 MTR_8g101320 33.594 128 68 5 419 535 429 550 4.75e-11 65.9
MS.gene047723.t1 MTR_6g079270 23.188 207 156 1 122 325 75 281 4.90e-11 64.7
MS.gene047723.t1 MTR_6g079440 25.843 178 129 1 160 334 325 502 5.01e-11 65.5
MS.gene047723.t1 MTR_6g079440 29.752 121 85 0 201 321 264 384 7.10e-11 65.1
MS.gene047723.t1 MTR_0014s0210 23.207 237 154 2 126 334 221 457 5.49e-11 65.5
MS.gene047723.t1 MTR_4g104790 23.629 237 172 5 82 314 217 448 5.71e-11 65.5
MS.gene047723.t1 MTR_5g037410 33.824 136 72 5 416 536 310 442 6.19e-11 65.5
MS.gene047723.t1 MTR_6g068790 28.571 119 85 0 201 319 420 538 6.22e-11 65.5
MS.gene047723.t1 MTR_6g080200 30.400 125 87 0 204 328 358 482 6.58e-11 65.1
MS.gene047723.t1 MTR_2g030540 24.316 329 198 7 10 306 296 605 6.70e-11 65.5
MS.gene047723.t1 MTR_8g071300 19.398 299 214 5 37 325 61 342 7.11e-11 65.5
MS.gene047723.t1 MTR_1g015050 35.156 128 64 6 419 535 406 525 7.39e-11 65.5
MS.gene047723.t1 MTR_4g076540 22.581 310 218 6 10 318 363 651 8.78e-11 65.1
MS.gene047723.t1 MTR_6g007690 35.878 131 60 6 412 535 64 177 9.13e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene047723.t1 AT5G66631 53.030 396 136 2 1 346 241 636 1.17e-142 427
MS.gene047723.t1 AT5G66631 22.727 220 161 2 121 340 99 309 3.06e-11 66.6
MS.gene047723.t1 AT2G33580 36.782 174 89 5 366 535 314 470 8.87e-21 96.7
MS.gene047723.t1 AT3G18110 26.577 222 160 1 122 343 362 580 8.09e-18 88.2
MS.gene047723.t1 AT3G18110 27.568 185 129 3 145 328 280 460 7.64e-13 72.0
MS.gene047723.t1 AT1G18900 23.750 240 179 1 99 338 336 571 8.24e-18 87.8
MS.gene047723.t1 AT1G18900 23.750 240 179 1 99 338 336 571 8.24e-18 87.8
MS.gene047723.t1 AT1G18900 23.750 240 179 1 99 338 336 571 8.24e-18 87.8
MS.gene047723.t1 AT1G18900 23.750 240 179 1 99 338 336 571 8.47e-18 87.8
MS.gene047723.t1 AT3G22670 21.519 316 214 3 49 330 87 402 4.12e-17 85.1
MS.gene047723.t1 AT2G31400 23.053 321 217 7 6 320 267 563 9.01e-17 84.3
MS.gene047723.t1 AT2G31400 23.053 321 217 7 6 320 267 563 1.04e-16 84.3
MS.gene047723.t1 AT5G18390 24.370 238 176 2 84 320 67 301 2.61e-16 82.0
MS.gene047723.t1 AT1G74750 23.137 255 192 1 84 338 316 566 6.62e-16 81.6
MS.gene047723.t1 AT1G74750 23.137 255 192 1 84 338 316 566 6.62e-16 81.6
MS.gene047723.t1 AT1G74750 23.137 255 192 1 84 338 316 566 6.62e-16 81.6
MS.gene047723.t1 AT1G74750 23.137 255 192 1 84 338 316 566 6.62e-16 81.6
MS.gene047723.t1 AT5G06400 26.316 247 173 5 85 328 146 386 6.72e-16 81.6
MS.gene047723.t1 AT5G65560 24.201 219 152 4 107 325 103 307 1.69e-15 80.5
MS.gene047723.t1 AT5G65560 23.099 342 213 10 4 330 285 591 3.21e-11 66.6
MS.gene047723.t1 AT5G65560 24.201 219 152 4 107 325 103 307 1.69e-15 80.5
MS.gene047723.t1 AT5G65560 23.099 342 213 10 4 330 285 591 3.21e-11 66.6
MS.gene047723.t1 AT5G65560 24.201 219 152 4 107 325 103 307 1.69e-15 80.5
MS.gene047723.t1 AT5G65560 23.099 342 213 10 4 330 285 591 3.21e-11 66.6
MS.gene047723.t1 AT5G39710 27.717 184 129 2 122 305 270 449 2.85e-15 79.3
MS.gene047723.t1 AT5G39710 20.872 321 225 7 10 325 243 539 3.99e-12 69.3
MS.gene047723.t1 AT1G05670 23.385 325 218 8 10 328 389 688 5.09e-15 78.6
MS.gene047723.t1 AT1G05670 21.898 411 280 9 42 427 176 570 5.19e-12 69.3
MS.gene047723.t1 AT1G05670 23.385 325 218 8 10 328 389 688 5.09e-15 78.6
MS.gene047723.t1 AT1G05670 21.898 411 280 9 42 427 176 570 5.19e-12 69.3
MS.gene047723.t1 AT1G05670 23.385 325 218 8 10 328 389 688 5.09e-15 78.6
MS.gene047723.t1 AT1G05670 21.898 411 280 9 42 427 176 570 5.19e-12 69.3
MS.gene047723.t1 AT3G62470 22.642 318 198 8 39 319 75 381 6.15e-15 78.2
MS.gene047723.t1 AT2G17140 23.677 359 220 9 4 325 109 450 8.17e-15 78.2
MS.gene047723.t1 AT2G17140 23.453 307 182 7 6 301 325 589 5.68e-14 75.5
MS.gene047723.t1 AT2G17140 23.904 251 177 5 96 338 5 249 4.19e-13 72.8
MS.gene047723.t1 AT2G17140 23.677 359 220 9 4 325 109 450 8.17e-15 78.2
MS.gene047723.t1 AT2G17140 23.453 307 182 7 6 301 325 589 5.68e-14 75.5
MS.gene047723.t1 AT2G17140 23.904 251 177 5 96 338 5 249 4.19e-13 72.8
MS.gene047723.t1 AT4G31850 25.387 323 220 7 10 331 296 598 1.10e-14 77.8
MS.gene047723.t1 AT4G31850 24.194 248 157 2 122 338 253 500 2.78e-12 70.1
MS.gene047723.t1 AT3G62540 22.642 318 198 8 39 319 75 381 1.57e-14 77.0
MS.gene047723.t1 AT1G62670 23.235 340 212 10 10 334 259 564 1.66e-14 77.0
MS.gene047723.t1 AT1G62670 25.466 322 215 7 122 439 216 516 3.38e-14 75.9
MS.gene047723.t1 AT1G62670 23.235 340 212 10 10 334 259 564 1.66e-14 77.0
MS.gene047723.t1 AT1G62670 25.466 322 215 7 122 439 216 516 3.38e-14 75.9
MS.gene047723.t1 AT1G12620 26.904 197 140 2 122 318 207 399 1.79e-14 76.6
MS.gene047723.t1 AT1G12620 21.994 341 231 7 2 334 242 555 4.53e-11 65.9
MS.gene047723.t1 AT3G22470 29.000 200 138 2 122 321 205 400 1.92e-14 76.6
MS.gene047723.t1 AT3G22470 29.000 200 138 2 122 321 205 400 2.18e-14 76.6
MS.gene047723.t1 AT3G22470 23.054 334 216 9 3 325 241 544 4.67e-14 75.5
MS.gene047723.t1 AT1G12775 27.723 202 138 4 122 321 223 418 2.58e-14 76.3
MS.gene047723.t1 AT1G63130 24.319 477 278 18 6 439 80 516 2.76e-14 76.3
MS.gene047723.t1 AT1G63130 22.321 336 220 9 10 334 259 564 5.62e-13 72.0
MS.gene047723.t1 AT1G63130 24.319 477 278 18 6 439 80 516 2.76e-14 76.3
MS.gene047723.t1 AT1G63130 22.321 336 220 9 10 334 259 564 5.62e-13 72.0
MS.gene047723.t1 AT2G32630 24.034 233 166 3 105 334 203 427 4.63e-14 75.5
MS.gene047723.t1 AT3G21630 33.728 169 85 7 383 536 271 427 4.70e-14 75.5
MS.gene047723.t1 AT5G14820 23.013 239 175 5 83 319 149 380 5.64e-14 75.1
MS.gene047723.t1 AT3G09060 21.774 248 191 1 93 340 9 253 6.16e-14 75.1
MS.gene047723.t1 AT3G09060 21.774 248 191 1 93 340 9 253 6.16e-14 75.1
MS.gene047723.t1 AT5G61990 33.636 110 73 0 204 313 630 739 6.86e-14 75.5
MS.gene047723.t1 AT5G61400 24.118 340 218 10 10 321 202 529 7.13e-14 75.1
MS.gene047723.t1 AT2G23770 38.983 118 64 3 418 535 343 452 8.39e-14 74.7
MS.gene047723.t1 AT5G38730 23.438 256 168 7 93 326 44 293 1.40e-13 73.9
MS.gene047723.t1 AT5G38730 26.667 225 160 2 119 343 265 484 8.53e-11 65.1
MS.gene047723.t1 AT4G01400 24.893 233 164 2 97 325 54 279 1.42e-13 73.6
MS.gene047723.t1 AT4G01400 21.757 239 173 5 85 320 117 344 6.41e-11 65.1
MS.gene047723.t1 AT3G16010 27.200 250 174 4 79 325 78 322 1.76e-13 73.6
MS.gene047723.t1 AT3G16010 25.157 159 115 1 168 326 450 604 2.68e-11 66.6
MS.gene047723.t1 AT1G74850 28.372 215 145 4 126 337 210 418 1.78e-13 73.9
MS.gene047723.t1 AT4G20140 40.157 127 62 4 424 536 944 1070 1.78e-13 73.9
MS.gene047723.t1 AT3G16890 21.713 327 201 7 3 328 386 658 1.79e-13 73.6
MS.gene047723.t1 AT3G16890 23.041 217 163 2 122 338 420 632 1.23e-11 67.8
MS.gene047723.t1 AT2G01390 20.755 212 164 1 92 303 87 294 1.81e-13 73.6
MS.gene047723.t1 AT1G62590 28.000 200 140 2 122 321 220 415 2.51e-13 73.2
MS.gene047723.t1 AT1G62590 28.000 200 140 2 122 321 220 415 2.51e-13 73.2
MS.gene047723.t1 AT3G16890 21.407 327 202 5 3 328 257 529 2.73e-13 72.8
MS.gene047723.t1 AT3G16890 23.041 217 163 2 122 338 291 503 1.64e-11 67.4
MS.gene047723.t1 AT5G02860 21.825 252 154 4 122 337 203 447 2.79e-13 73.2
MS.gene047723.t1 AT5G02860 21.121 232 176 3 100 328 249 476 1.30e-11 67.8
MS.gene047723.t1 AT5G02860 21.825 252 154 4 122 337 203 447 2.79e-13 73.2
MS.gene047723.t1 AT5G02860 21.121 232 176 3 100 328 249 476 1.30e-11 67.8
MS.gene047723.t1 AT5G02860 21.825 252 154 4 122 337 203 447 2.79e-13 73.2
MS.gene047723.t1 AT5G02860 21.121 232 176 3 100 328 249 476 1.30e-11 67.8
MS.gene047723.t1 AT5G02860 21.825 252 154 4 122 337 203 447 2.79e-13 73.2
MS.gene047723.t1 AT5G02860 21.121 232 176 3 100 328 249 476 1.30e-11 67.8
MS.gene047723.t1 AT5G02860 21.825 252 154 4 122 337 203 447 2.79e-13 73.2
MS.gene047723.t1 AT5G02860 21.121 232 176 3 100 328 249 476 1.30e-11 67.8
MS.gene047723.t1 AT1G62930 22.619 336 219 9 10 334 258 563 4.80e-13 72.4
MS.gene047723.t1 AT1G62910 25.305 328 208 8 122 439 218 518 4.82e-13 72.4
MS.gene047723.t1 AT1G62910 22.319 345 225 11 2 334 253 566 2.81e-12 69.7
MS.gene047723.t1 AT1G62910 22.927 205 154 2 122 326 113 313 6.22e-11 65.5
MS.gene047723.t1 AT1G30290 26.106 226 154 5 133 355 353 568 4.99e-13 72.4
MS.gene047723.t1 AT1G30290 26.263 198 140 3 133 328 353 546 5.01e-13 72.4
MS.gene047723.t1 AT2G06000 25.243 206 145 3 125 328 101 299 5.20e-13 72.0
MS.gene047723.t1 AT2G06000 20.732 328 234 5 1 325 97 401 1.36e-11 67.4
MS.gene047723.t1 AT2G06000 25.243 206 145 3 125 328 101 299 5.20e-13 72.0
MS.gene047723.t1 AT2G06000 20.732 328 234 5 1 325 97 401 1.36e-11 67.4
MS.gene047723.t1 AT1G55630 21.622 333 228 7 3 328 148 454 5.88e-13 71.6
MS.gene047723.t1 AT3G04760 22.478 347 231 8 6 325 227 562 6.23e-13 72.0
MS.gene047723.t1 AT1G12700 28.462 130 93 0 201 330 349 478 6.71e-13 71.6
MS.gene047723.t1 AT1G12700 21.429 336 202 7 3 334 275 552 1.52e-12 70.5
MS.gene047723.t1 AT1G12700 28.462 130 93 0 201 330 349 478 6.71e-13 71.6
MS.gene047723.t1 AT1G12700 21.429 336 202 7 3 334 275 552 1.52e-12 70.5
MS.gene047723.t1 AT1G12700 28.462 130 93 0 201 330 333 462 6.86e-13 71.6
MS.gene047723.t1 AT1G12700 21.429 336 202 7 3 334 259 536 1.76e-12 70.5
MS.gene047723.t1 AT3G53700 23.611 216 161 1 128 343 436 647 7.96e-13 71.6
MS.gene047723.t1 AT3G53700 20.732 328 197 7 3 325 185 454 4.13e-11 66.2
MS.gene047723.t1 AT5G21222 20.397 353 243 8 4 328 351 693 8.39e-13 71.6
MS.gene047723.t1 AT5G21222 20.397 353 243 8 4 328 351 693 8.39e-13 71.6
MS.gene047723.t1 AT5G21222 20.397 353 243 8 4 328 351 693 8.39e-13 71.6
MS.gene047723.t1 AT5G21222 20.397 353 243 8 4 328 351 693 8.39e-13 71.6
MS.gene047723.t1 AT5G16420 23.297 279 163 5 92 325 43 315 8.78e-13 71.2
MS.gene047723.t1 AT5G16420 23.297 279 163 5 92 325 43 315 8.78e-13 71.2
MS.gene047723.t1 AT5G16420 23.297 279 163 5 92 325 43 315 8.78e-13 71.2
MS.gene047723.t1 AT5G16420 23.297 279 163 5 92 325 43 315 8.78e-13 71.2
MS.gene047723.t1 AT1G77340 23.318 223 155 4 107 328 40 247 9.35e-13 70.5
MS.gene047723.t1 AT5G16640 21.429 350 235 7 1 340 180 499 1.69e-12 70.1
MS.gene047723.t1 AT3G25210 22.358 246 161 3 101 328 82 315 2.11e-12 69.3
MS.gene047723.t1 AT1G79490 28.824 170 113 2 164 331 315 478 2.19e-12 70.5
MS.gene047723.t1 AT1G09820 23.938 259 161 5 96 320 194 450 2.42e-12 70.1
MS.gene047723.t1 AT1G09820 28.030 132 94 1 203 334 403 533 1.21e-11 67.8
MS.gene047723.t1 AT3G04760 20.308 325 236 7 3 325 229 532 3.05e-12 69.7
MS.gene047723.t1 AT1G13040 22.699 326 195 9 2 326 215 484 3.45e-12 69.3
MS.gene047723.t1 AT1G13040 22.699 326 195 9 2 326 215 484 3.45e-12 69.3
MS.gene047723.t1 AT1G63330 28.000 200 140 2 122 321 145 340 3.99e-12 69.3
MS.gene047723.t1 AT1G63330 28.000 200 140 2 122 321 145 340 3.99e-12 69.3
MS.gene047723.t1 AT1G63330 28.000 200 140 2 122 321 145 340 3.99e-12 69.3
MS.gene047723.t1 AT1G09680 21.212 231 177 3 109 339 223 448 5.01e-12 68.9
MS.gene047723.t1 AT1G63400 21.239 339 224 10 2 328 255 562 5.24e-12 68.9
MS.gene047723.t1 AT1G09900 25.946 185 130 3 137 321 147 324 5.31e-12 68.9
MS.gene047723.t1 AT1G09900 27.200 125 88 1 201 325 172 293 2.66e-11 66.6
MS.gene047723.t1 AT1G02060 24.464 233 138 6 97 328 71 266 5.34e-12 68.9
MS.gene047723.t1 AT5G57250 24.464 233 168 4 98 330 182 406 1.13e-11 68.2
MS.gene047723.t1 AT2G07020 36.296 135 65 7 419 542 407 531 1.33e-11 67.8
MS.gene047723.t1 AT5G59900 23.476 328 222 11 3 325 293 596 1.45e-11 67.8
MS.gene047723.t1 AT5G64320 30.709 127 84 1 202 328 253 375 1.58e-11 67.4
MS.gene047723.t1 AT5G55840 30.657 137 94 1 204 340 406 541 1.69e-11 67.8
MS.gene047723.t1 AT5G55840 25.112 223 153 4 113 321 56 278 7.76e-11 65.5
MS.gene047723.t1 AT4G26800 30.508 118 82 0 204 321 86 203 1.71e-11 66.6
MS.gene047723.t1 AT1G12300 22.059 340 230 8 3 334 259 571 1.74e-11 67.4
MS.gene047723.t1 AT1G12300 25.000 200 146 2 122 321 223 418 2.60e-11 66.6
MS.gene047723.t1 AT5G01110 21.455 275 202 4 108 382 217 477 1.78e-11 67.4
MS.gene047723.t1 AT5G55840 30.657 137 94 1 204 340 446 581 1.79e-11 67.8
MS.gene047723.t1 AT5G55840 25.112 223 153 4 113 321 96 318 7.91e-11 65.5
MS.gene047723.t1 AT5G55840 30.657 137 94 1 204 340 446 581 1.79e-11 67.8
MS.gene047723.t1 AT5G55840 25.112 223 153 4 113 321 96 318 7.91e-11 65.5
MS.gene047723.t1 AT5G01110 21.455 275 202 4 108 382 245 505 1.88e-11 67.4
MS.gene047723.t1 AT1G64100 27.326 172 112 3 204 373 264 424 2.25e-11 67.0
MS.gene047723.t1 AT1G64100 27.326 172 112 3 204 373 264 424 2.25e-11 67.0
MS.gene047723.t1 AT4G26800 30.508 118 82 0 204 321 156 273 2.25e-11 66.6
MS.gene047723.t1 AT1G20300 21.811 243 179 4 113 349 136 373 2.33e-11 66.6
MS.gene047723.t1 AT1G71060 21.795 234 176 3 114 347 115 341 2.42e-11 66.6
MS.gene047723.t1 AT1G64100 26.857 175 115 3 201 373 261 424 2.65e-11 67.0
MS.gene047723.t1 AT5G65820 24.215 223 155 5 111 328 131 344 2.69e-11 66.6
MS.gene047723.t1 AT1G78940 33.594 128 66 4 419 535 365 484 2.76e-11 66.6
MS.gene047723.t1 AT4G26800 30.508 118 82 0 204 321 231 348 3.17e-11 66.2
MS.gene047723.t1 AT3G60050 23.148 216 162 1 105 320 127 338 3.71e-11 65.9
MS.gene047723.t1 AT3G60050 21.450 331 231 5 3 328 145 451 4.43e-11 65.9
MS.gene047723.t1 AT3G60050 23.148 216 162 1 105 320 127 338 3.71e-11 65.9
MS.gene047723.t1 AT3G60050 21.450 331 231 5 3 328 145 451 4.43e-11 65.9
MS.gene047723.t1 AT1G78940 33.594 128 66 4 419 535 436 555 3.98e-11 66.2
MS.gene047723.t1 AT1G64580 29.134 127 90 0 204 330 292 418 4.02e-11 65.9
MS.gene047723.t1 AT1G64583 30.370 135 92 1 204 336 214 348 4.15e-11 65.9
MS.gene047723.t1 AT1G64583 30.370 135 92 1 204 336 189 323 4.19e-11 65.9
MS.gene047723.t1 AT1G78940 33.594 128 66 4 419 535 436 555 4.35e-11 66.2
MS.gene047723.t1 AT1G03560 26.531 196 134 3 156 345 321 512 4.80e-11 65.9
MS.gene047723.t1 AT1G16760 32.031 128 68 4 419 535 438 557 4.88e-11 65.9
MS.gene047723.t1 AT1G16760 32.031 128 68 4 419 535 438 557 5.11e-11 65.9
MS.gene047723.t1 AT4G11690 22.985 335 219 9 10 334 174 479 5.23e-11 65.5
MS.gene047723.t1 AT5G18475 26.400 125 91 1 202 325 233 357 5.38e-11 65.5
MS.gene047723.t1 AT1G63320 25.758 132 89 1 204 326 19 150 5.66e-11 62.4
MS.gene047723.t1 AT2G15630 21.662 337 224 9 3 330 256 561 5.77e-11 65.5
MS.gene047723.t1 AT4G11690 22.985 335 219 9 10 334 201 506 6.32e-11 65.5
MS.gene047723.t1 AT1G62720 28.824 170 111 3 163 326 64 229 6.58e-11 65.1
MS.gene047723.t1 AT1G17540 33.566 143 72 6 404 535 386 516 7.00e-11 65.5
MS.gene047723.t1 AT2G35130 23.118 186 139 2 133 318 232 413 7.35e-11 65.1
MS.gene047723.t1 AT5G04810 26.190 168 120 2 159 326 586 749 7.54e-11 65.5
MS.gene047723.t1 AT1G51965 26.400 125 92 0 201 325 480 604 7.56e-11 65.5
MS.gene047723.t1 AT2G35130 23.118 186 139 2 133 318 235 416 7.77e-11 65.1
MS.gene047723.t1 AT1G62914 23.494 332 209 9 122 439 213 513 7.94e-11 65.1
MS.gene047723.t1 AT5G04810 26.220 164 117 2 163 326 590 749 8.27e-11 65.5
MS.gene047723.t1 AT1G62680 21.993 291 212 3 101 391 61 336 8.28e-11 65.1
MS.gene047723.t1 AT1G62680 28.689 122 87 0 204 325 333 454 8.87e-11 65.1
MS.gene047723.t1 AT1G62680 21.993 291 212 3 101 391 61 336 8.28e-11 65.1
MS.gene047723.t1 AT1G62680 28.689 122 87 0 204 325 333 454 8.87e-11 65.1
MS.gene047723.t1 AT1G74580 23.611 216 156 3 122 332 316 527 8.38e-11 65.5
MS.gene047723.t1 AT1G74580 23.611 216 156 3 122 332 316 527 8.38e-11 65.5
MS.gene047723.t1 AT1G74580 23.611 216 156 3 122 332 316 527 8.38e-11 65.5
MS.gene047723.t1 AT2G35130 23.118 186 139 2 133 318 257 438 8.48e-11 65.1
MS.gene047723.t1 AT5G46580 24.681 235 165 4 100 330 159 385 8.89e-11 65.1

Find 109 sgRNAs with CRISPR-Local

Find 236 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTGAAAATGTTTGGATATC+TGG 0.170597 5.3:-10818329 None:intergenic
CAAAATCTGGCTCTTATAAT+TGG 0.262266 5.3:+10820241 MS.gene047723:CDS
TTTGAAGATATGAAGAATTC+TGG 0.266472 5.3:+10818509 MS.gene047723:CDS
AAAGTCAATGATTAACCTTA+TGG 0.297432 5.3:-10818120 None:intergenic
CTGTGTGGAATTTCTTCTGC+TGG 0.310260 5.3:+10817955 MS.gene047723:CDS
GAAGATGGTTGATCAAGTTT+TGG 0.326422 5.3:-10820196 None:intergenic
ATCTTTGAAAACTTCAAATT+CGG 0.332020 5.3:+10820693 MS.gene047723:CDS
ACCCTTGTTAGTTCAAAGTT+TGG 0.344284 5.3:+10820085 MS.gene047723:CDS
GTTAATGAGATGCAAGTTGA+TGG 0.346251 5.3:+10817573 MS.gene047723:CDS
GTCTATGAGTATGCTGATAA+TGG 0.351035 5.3:+10820643 MS.gene047723:CDS
GCATTAGACCTGAAAATGTT+TGG 0.360031 5.3:-10818337 None:intergenic
ATGTCTCTGTGGATTATTCT+TGG 0.369404 5.3:-10820792 None:intergenic
TTCGGTTCTAATTGAAGGTT+TGG 0.375503 5.3:+10817515 MS.gene047723:CDS
AACTCTTTGATGGCCGAATC+AGG 0.382129 5.3:-10818539 None:intergenic
AGTAAAATGTTTGATGAAGT+TGG 0.386223 5.3:+10817543 MS.gene047723:CDS
CAAGCCAACAATGTATGAAA+TGG 0.386975 5.3:+10820411 MS.gene047723:CDS
ACGTACTTTGAAACAGTATT+CGG 0.388885 5.3:+10817497 MS.gene047723:CDS
TGGAAATCTTGTGAAACTAA+TGG 0.394475 5.3:+10820585 MS.gene047723:CDS
TACGTCCATGTCGCGCTAGA+AGG 0.402460 5.3:-10818034 None:intergenic
CTTCACTAGCAACTCTTTGA+TGG 0.403178 5.3:-10818549 None:intergenic
GAAGGATGAAGGATTTCTTA+AGG 0.405813 5.3:+10817638 MS.gene047723:CDS
TGCTGGGTTGCTGATCGACC+TGG 0.409148 5.3:+10817972 MS.gene047723:CDS
TTCTGGTTCCATACCTGATT+CGG 0.410204 5.3:+10818526 MS.gene047723:CDS
AAGAAATTCCACACAGTATC+CGG 0.412127 5.3:-10817948 None:intergenic
CAGTATTCGGTTCTAATTGA+AGG 0.419628 5.3:+10817510 MS.gene047723:CDS
ACTTGCAATAACCTTCTATC+AGG 0.422153 5.3:-10818457 None:intergenic
GTCCTTCCACTTGCATTACC+TGG 0.422582 5.3:+10818641 MS.gene047723:CDS
TTGTCAGCTAACATTTCAAC+TGG 0.427505 5.3:-10820115 None:intergenic
GCCAGACGCGTATCTGTATA+AGG 0.430893 5.3:+10818433 MS.gene047723:CDS
ATCGGAATTCCTTCCACACT+TGG 0.431442 5.3:-10818264 None:intergenic
AACAATGATCGAATACTTTG+TGG 0.433378 5.3:+10818185 MS.gene047723:CDS
CAACAAGAGCTGCACTGGCT+TGG 0.436660 5.3:+10818480 MS.gene047723:CDS
CAAGTCAACAAGAGCTGCAC+TGG 0.438454 5.3:+10818475 MS.gene047723:CDS
ACTTGAAGAGTGGTTGTTCT+CGG 0.440441 5.3:+10820669 MS.gene047723:CDS
CTGAAAATGTTTGGATATCT+GGG 0.442804 5.3:-10818328 None:intergenic
ACACTCTTGATTCTTTCATC+CGG 0.443612 5.3:-10817690 None:intergenic
GTTTACAAGGCTAATATAGA+TGG 0.444846 5.3:+10820490 MS.gene047723:CDS
ACATCCATTTCATACATTGT+TGG 0.446716 5.3:-10820415 None:intergenic
ATTCGGTGGTTTCGCTTACA+TGG 0.454057 5.3:+10820710 MS.gene047723:CDS
TTGCAGCAGGTGAAGGATGA+AGG 0.460732 5.3:+10817627 MS.gene047723:CDS
CATCTTGAAGATCAGAATAG+AGG 0.461168 5.3:+10818076 MS.gene047723:CDS
GGAAATCTTGTGAAACTAAT+GGG 0.462411 5.3:+10820586 MS.gene047723:CDS
CTTGATCAACCATCTTCAAA+TGG 0.466617 5.3:+10820202 MS.gene047723:CDS
CACTCTTGATTCTTTCATCC+GGG 0.466810 5.3:-10817689 None:intergenic
CTGTATAAGGTCCTGATAGA+AGG 0.471205 5.3:+10818446 MS.gene047723:CDS
GGTGAGTTTGTTATTGCAGC+AGG 0.472558 5.3:+10817614 MS.gene047723:CDS
AGTTGCTAGTGAAGAGCCTC+TGG 0.476859 5.3:+10818558 MS.gene047723:CDS
TCATCTCATCAAGCATGTCC+AGG 0.481198 5.3:-10818289 None:intergenic
GTGAAGAGCCTCTGGAAAGA+AGG 0.484880 5.3:+10818566 MS.gene047723:CDS
TGAAGGATTTCTTAAGGATG+TGG 0.487856 5.3:+10817644 MS.gene047723:CDS
TGTGTGGAATTTCTTCTGCT+GGG 0.490658 5.3:+10817956 MS.gene047723:CDS
ATAGCCATGGATGTTGCAAT+TGG 0.492998 5.3:+10820748 MS.gene047723:CDS
ATTAACCTTATGGTTCTGAA+TGG 0.498328 5.3:-10818110 None:intergenic
CAAAGTTCGTGTGGACAACT+AGG 0.503289 5.3:+10817892 MS.gene047723:CDS
GATTGGTGAATCAGTTTACA+AGG 0.505991 5.3:+10820477 MS.gene047723:CDS
CTGAGTGAGAATTGTAAGAT+TGG 0.506708 5.3:+10820460 MS.gene047723:CDS
ATCAAGCATGTCCAGGGTAT+CGG 0.509612 5.3:-10818282 None:intergenic
ACAATGATCGAATACTTTGT+GGG 0.511017 5.3:+10818186 MS.gene047723:CDS
CACCAAACTTTGAACTAACA+AGG 0.512914 5.3:-10820087 None:intergenic
GTTCTAATTGAAGGTTTGGT+TGG 0.519428 5.3:+10817519 MS.gene047723:CDS
ACCTTATACAGATACGCGTC+TGG 0.524198 5.3:-10818434 None:intergenic
CAGACCAATTGCAACATCCA+TGG 0.524233 5.3:-10820752 None:intergenic
GTATGAAATGGATGTGATCA+TGG 0.524330 5.3:+10820423 MS.gene047723:CDS
TTTGATGGCCGAATCAGGTA+TGG 0.524348 5.3:-10818534 None:intergenic
ATGTGGATGAATTGTTTGAA+GGG 0.525014 5.3:+10817661 MS.gene047723:CDS
AAATGCTGATGCTGCTCTGA+AGG 0.525513 5.3:+10818157 MS.gene047723:CDS
GATGTGGATGAATTGTTTGA+AGG 0.528226 5.3:+10817660 MS.gene047723:CDS
TTTGAAAACTTCAAATTCGG+TGG 0.535827 5.3:+10820696 MS.gene047723:CDS
TCTAGTGCTGATACCTCATC+AGG 0.535975 5.3:-10817864 None:intergenic
GGTTAATGTTCTTAAAAGAG+AGG 0.546099 5.3:-10818243 None:intergenic
TTAAGAACATTAACCAAGTG+TGG 0.552345 5.3:+10818251 MS.gene047723:CDS
GAACATTAACCAAGTGTGGA+AGG 0.555715 5.3:+10818255 MS.gene047723:CDS
ATGACCCTTCTAGCGCGACA+TGG 0.556861 5.3:+10818029 MS.gene047723:CDS
TTAGTTTCACAAGATTTCCA+TGG 0.557743 5.3:-10820582 None:intergenic
ACGTCCATGTCGCGCTAGAA+GGG 0.559332 5.3:-10818033 None:intergenic
GCCTCTGGAAAGAAGGTAGA+CGG 0.559458 5.3:+10818573 MS.gene047723:CDS
AATTGCAACATCCATGGCTA+TGG 0.562845 5.3:-10820746 None:intergenic
ATCTTGAAGATCAGAATAGA+GGG 0.566478 5.3:+10818077 MS.gene047723:CDS
GAAAGAAGGTAGACGGAGAG+AGG 0.569327 5.3:+10818580 MS.gene047723:CDS
TATATATTATGAGTAAATCC+AGG 0.571391 5.3:-10817990 None:intergenic
TCCGTCTACCTTCTTTCCAG+AGG 0.577819 5.3:-10818574 None:intergenic
TGATGAGGTATCAGCACTAG+AGG 0.580742 5.3:+10817866 MS.gene047723:CDS
TCAGAGAATAACCATAGCCA+TGG 0.584198 5.3:+10820735 MS.gene047723:CDS
TTTGTTATTGCAGCAGGTGA+AGG 0.584701 5.3:+10817620 MS.gene047723:CDS
GTTCGTGTGGACAACTAGGT+TGG 0.586491 5.3:+10817896 MS.gene047723:CDS
GACTACCATTCAGAACCATA+AGG 0.587707 5.3:+10818105 MS.gene047723:CDS
CTGACAGTCCATACATGACC+AGG 0.594467 5.3:-10818659 None:intergenic
TGGAAGGAATTCCGATACCC+TGG 0.598845 5.3:+10818271 MS.gene047723:CDS
CATTGAAAAGAGTTTCTGCA+CGG 0.599322 5.3:-10818390 None:intergenic
AGGGATCAAAACTGAACGGT+CGG 0.610669 5.3:-10820161 None:intergenic
ATTGTTTGAAGGGATTTGCC+CGG 0.613868 5.3:+10817671 MS.gene047723:CDS
AACAAACTCACCGTTCGACT+AGG 0.617703 5.3:-10817603 None:intergenic
CATCTCATCAAGCATGTCCA+GGG 0.618669 5.3:-10818288 None:intergenic
ACATGACCAGGTAATGCAAG+TGG 0.620837 5.3:-10818647 None:intergenic
ACAGAATTGCAGTCCTGATG+AGG 0.621540 5.3:+10817851 MS.gene047723:intron
GCAGCTCTCTTCAACAGCTG+CGG 0.624107 5.3:-10818603 None:intergenic
TGGAATATTACCTAGTCGAA+CGG 0.624584 5.3:+10817593 MS.gene047723:CDS
TAGAGGGTGCAAAGTTCGTG+TGG 0.631089 5.3:+10817883 MS.gene047723:CDS
GACCAGGTAATGCAAGTGGA+AGG 0.640755 5.3:-10818643 None:intergenic
GAGCTGCGAGGAAGTAAATG+TGG 0.649634 5.3:+10818619 MS.gene047723:CDS
GATGAGGTATCAGCACTAGA+GGG 0.650518 5.3:+10817867 MS.gene047723:CDS
GGTGTGTCTTCTGACAATGA+TGG 0.650870 5.3:+10820607 MS.gene047723:CDS
ACCAAACTTTGAACTAACAA+GGG 0.655493 5.3:-10820086 None:intergenic
GAAATGGATGTGATCATGGA+AGG 0.661178 5.3:+10820427 MS.gene047723:CDS
ATTCTGCAGAAGGTAAACCA+TGG 0.662360 5.3:+10820565 MS.gene047723:CDS
TTAGGTCACCGGATACTGTG+TGG 0.679276 5.3:+10817940 MS.gene047723:CDS
TCACAGGGATCAAAACTGAA+CGG 0.686313 5.3:-10820165 None:intergenic
ATAATGGATCACTTGAAGAG+TGG 0.688786 5.3:+10820659 MS.gene047723:CDS
AGCTGTTGAAGAGAGCTGCG+AGG 0.717575 5.3:+10818607 MS.gene047723:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATAATTGCATATATATAA+TGG + chr5.3:10819701-10819720 MS.gene047723:intron 10.0%
!! ATGCAATTATAATATAATAC+AGG - chr5.3:10819693-10819712 None:intergenic 15.0%
!! TAAAGATGGTAAGAATAATA+TGG - chr5.3:10819866-10819885 None:intergenic 20.0%
!! TATATATTATGAGTAAATCC+AGG - chr5.3:10817993-10818012 None:intergenic 20.0%
!!! AATTTTCTTACAAAAAGAGT+TGG + chr5.3:10819133-10819152 MS.gene047723:intron 20.0%
!!! ATCTTTGAAAACTTCAAATT+CGG + chr5.3:10820693-10820712 MS.gene047723:CDS 20.0%
!!! CTTAAACTGTGATTTATTTT+GGG + chr5.3:10818835-10818854 MS.gene047723:intron 20.0%
!!! CTTTTTGTAAGAAAATTAGA+AGG - chr5.3:10819130-10819149 None:intergenic 20.0%
!!! TCAAATAGTTTAGTTTCAAA+GGG + chr5.3:10818716-10818735 MS.gene047723:intron 20.0%
!!! TTCAAATAGTTTAGTTTCAA+AGG + chr5.3:10818715-10818734 MS.gene047723:intron 20.0%
!!! TTTTTTTTGTTGGTGTAAAA+GGG + chr5.3:10819209-10819228 MS.gene047723:intron 20.0%
!!! TTTTTTTTTGTTGGTGTAAA+AGG + chr5.3:10819208-10819227 MS.gene047723:intron 20.0%
! AAAGTCAATGATTAACCTTA+TGG - chr5.3:10818123-10818142 None:intergenic 25.0%
! AGTAAAATGTTTGATGAAGT+TGG + chr5.3:10817543-10817562 MS.gene047723:CDS 25.0%
! AGTATCTTATTACTTATGTG+TGG + chr5.3:10820044-10820063 MS.gene047723:intron 25.0%
! ATTCTGCCATAAGAATATAA+CGG - chr5.3:10819321-10819340 None:intergenic 25.0%
! CCAAAATAAATCACAGTTTA+AGG - chr5.3:10818837-10818856 None:intergenic 25.0%
! TACACCAACAAAAAAAAAAG+AGG - chr5.3:10819206-10819225 None:intergenic 25.0%
! TATATTGAAACCTATGTAAC+TGG + chr5.3:10819639-10819658 MS.gene047723:intron 25.0%
! TATGGTATTATAACCCAATT+TGG - chr5.3:10819848-10819867 None:intergenic 25.0%
! TATGGTTTAACGTTTAACAA+AGG - chr5.3:10819733-10819752 None:intergenic 25.0%
! TATTATTTGTTCCCTATTTC+TGG - chr5.3:10819590-10819609 None:intergenic 25.0%
! TCAAAGAATCAATTGAACAA+AGG + chr5.3:10820016-10820035 MS.gene047723:intron 25.0%
! TTAACACCGTTATATTCTTA+TGG + chr5.3:10819312-10819331 MS.gene047723:intron 25.0%
! TTGCACAATCATATAATGAA+TGG + chr5.3:10819009-10819028 MS.gene047723:intron 25.0%
! TTTGAAGATATGAAGAATTC+TGG + chr5.3:10818509-10818528 MS.gene047723:CDS 25.0%
!! CCTTAAACTGTGATTTATTT+TGG + chr5.3:10818834-10818853 MS.gene047723:intron 25.0%
!! CTTGATGAGATGATTTTAAA+TGG + chr5.3:10818299-10818318 MS.gene047723:CDS 25.0%
!! TGTTCAATTGATTCTTTGAA+GGG - chr5.3:10820015-10820034 None:intergenic 25.0%
!! TTGTTCAATTGATTCTTTGA+AGG - chr5.3:10820016-10820035 None:intergenic 25.0%
!!! AGGTTAATCATTGACTTTTA+TGG + chr5.3:10818125-10818144 MS.gene047723:CDS 25.0%
!!! AGTTCCTCTTTTTTTTTTGT+TGG + chr5.3:10819199-10819218 MS.gene047723:intron 25.0%
!!! GAGTTTTGAGAATGTATTAT+TGG + chr5.3:10818896-10818915 MS.gene047723:intron 25.0%
!!! GGTTAATCATTGACTTTTAT+GGG + chr5.3:10818126-10818145 MS.gene047723:CDS 25.0%
AAATCACAGTTTAAGGAACT+TGG - chr5.3:10818830-10818849 None:intergenic 30.0%
AACAATGATCGAATACTTTG+TGG + chr5.3:10818185-10818204 MS.gene047723:CDS 30.0%
AATCAAAAAAGATGCTTCTG+AGG + chr5.3:10820534-10820553 MS.gene047723:CDS 30.0%
ACAATGATCGAATACTTTGT+GGG + chr5.3:10818186-10818205 MS.gene047723:CDS 30.0%
ACATCCATTTCATACATTGT+TGG - chr5.3:10820418-10820437 None:intergenic 30.0%
ACCAAACTTTGAACTAACAA+GGG - chr5.3:10820089-10820108 None:intergenic 30.0%
ATCTTGAAGATCAGAATAGA+GGG + chr5.3:10818077-10818096 MS.gene047723:CDS 30.0%
ATGCCTTTACCAAAATGTTA+AGG - chr5.3:10819773-10819792 None:intergenic 30.0%
ATGTGGATGAATTGTTTGAA+GGG + chr5.3:10817661-10817680 MS.gene047723:CDS 30.0%
CTGAAAATGTTTGGATATCT+GGG - chr5.3:10818331-10818350 None:intergenic 30.0%
GAATATTAATCCCTCGAATA+GGG + chr5.3:10819251-10819270 MS.gene047723:intron 30.0%
GGAAATCTTGTGAAACTAAT+GGG + chr5.3:10820586-10820605 MS.gene047723:CDS 30.0%
GGTTAATGTTCTTAAAAGAG+AGG - chr5.3:10818246-10818265 None:intergenic 30.0%
GTTTACAAGGCTAATATAGA+TGG + chr5.3:10820490-10820509 MS.gene047723:CDS 30.0%
TATTAGATGTCAAGCTTATG+TGG + chr5.3:10819527-10819546 MS.gene047723:intron 30.0%
TCATATAATGAATGGACCTT+TGG + chr5.3:10819017-10819036 MS.gene047723:intron 30.0%
TGAATATTAATCCCTCGAAT+AGG + chr5.3:10819250-10819269 MS.gene047723:intron 30.0%
TGCCTTTACCAAAATGTTAA+GGG - chr5.3:10819772-10819791 None:intergenic 30.0%
TGCGCAGAATATAATAAAGA+TGG - chr5.3:10819880-10819899 None:intergenic 30.0%
TGGAAATCTTGTGAAACTAA+TGG + chr5.3:10820585-10820604 MS.gene047723:CDS 30.0%
TTAAGAACATTAACCAAGTG+TGG + chr5.3:10818251-10818270 MS.gene047723:CDS 30.0%
TTAGTTTCACAAGATTTCCA+TGG - chr5.3:10820585-10820604 None:intergenic 30.0%
TTTCAAATCTTAGACACTGT+TGG - chr5.3:10819928-10819947 None:intergenic 30.0%
TTTGAAAACTTCAAATTCGG+TGG + chr5.3:10820696-10820715 MS.gene047723:CDS 30.0%
TTTGAGAATGTATTATTGGC+AGG + chr5.3:10818900-10818919 MS.gene047723:intron 30.0%
! ATGCAGTATTTTTCACAACT+TGG + chr5.3:10818356-10818375 MS.gene047723:CDS 30.0%
! CTTATAATTGGTATTAGCCT+AGG + chr5.3:10820253-10820272 MS.gene047723:intron 30.0%
! CTTTTTCTTCCATTTGAAGA+TGG - chr5.3:10820214-10820233 None:intergenic 30.0%
! GCAAGATACTTAGAAGTTTT+AGG + chr5.3:10817922-10817941 MS.gene047723:CDS 30.0%
! TACTGCACCTTAAAACTTTT+TGG - chr5.3:10818869-10818888 None:intergenic 30.0%
!! AAATGAAAAAAGCACTTCCT+AGG - chr5.3:10820273-10820292 None:intergenic 30.0%
!! ACGTACTTTGAAACAGTATT+CGG + chr5.3:10817497-10817516 MS.gene047723:CDS 30.0%
!! ATTAACCTTATGGTTCTGAA+TGG - chr5.3:10818113-10818132 None:intergenic 30.0%
!! CAAAATCTGGCTCTTATAAT+TGG + chr5.3:10820241-10820260 MS.gene047723:CDS 30.0%
!!! AAACTGTGATTTATTTTGGG+AGG + chr5.3:10818838-10818857 MS.gene047723:intron 30.0%
!!! AACTGTGATTTATTTTGGGA+GGG + chr5.3:10818839-10818858 MS.gene047723:intron 30.0%
!!! ACTTTTTTTTAGGCATAGCA+TGG - chr5.3:10819386-10819405 None:intergenic 30.0%
!!! CTTTTTTTTAGGCATAGCAT+GGG - chr5.3:10819385-10819404 None:intergenic 30.0%
AAAAAGCAGCAGTCAAAATC+TGG + chr5.3:10820228-10820247 MS.gene047723:CDS 35.0%
AAAAAGCTAGACTCAAGCAA+AGG + chr5.3:10819468-10819487 MS.gene047723:intron 35.0%
AACGATTGAATGAGATGACA+TGG - chr5.3:10819412-10819431 None:intergenic 35.0%
AAGAAATTCCACACAGTATC+CGG - chr5.3:10817951-10817970 None:intergenic 35.0%
AAGTAACTTATCTGCAGTCT+CGG - chr5.3:10820368-10820387 None:intergenic 35.0%
ACACTCTTGATTCTTTCATC+CGG - chr5.3:10817693-10817712 None:intergenic 35.0%
ACCCTTGTTAGTTCAAAGTT+TGG + chr5.3:10820085-10820104 MS.gene047723:CDS 35.0%
ACGATTGAATGAGATGACAT+GGG - chr5.3:10819411-10819430 None:intergenic 35.0%
ACTTGCAATAACCTTCTATC+AGG - chr5.3:10818460-10818479 None:intergenic 35.0%
AGTAGCTATGTACCAGAAAT+AGG + chr5.3:10819575-10819594 MS.gene047723:intron 35.0%
ATGGGATTCACTTAAAACCT+TGG + chr5.3:10817799-10817818 MS.gene047723:intron 35.0%
CAAGCCAACAATGTATGAAA+TGG + chr5.3:10820411-10820430 MS.gene047723:CDS 35.0%
CACAATGTGATCATGTAGAT+GGG + chr5.3:10817781-10817800 MS.gene047723:intron 35.0%
CACCAAACTTTGAACTAACA+AGG - chr5.3:10820090-10820109 None:intergenic 35.0%
CATCTTGAAGATCAGAATAG+AGG + chr5.3:10818076-10818095 MS.gene047723:CDS 35.0%
CATTGAAAAGAGTTTCTGCA+CGG - chr5.3:10818393-10818412 None:intergenic 35.0%
CCTGAAAATGTTTGGATATC+TGG - chr5.3:10818332-10818351 None:intergenic 35.0%
CTGAGTGAGAATTGTAAGAT+TGG + chr5.3:10820460-10820479 MS.gene047723:CDS 35.0%
CTTGATCAACCATCTTCAAA+TGG + chr5.3:10820202-10820221 MS.gene047723:CDS 35.0%
GAAGGATGAAGGATTTCTTA+AGG + chr5.3:10817638-10817657 MS.gene047723:CDS 35.0%
GATCCTTCATTGTATTCACT+TGG + chr5.3:10818966-10818985 MS.gene047723:intron 35.0%
GATGTGGATGAATTGTTTGA+AGG + chr5.3:10817660-10817679 MS.gene047723:CDS 35.0%
GATTGGTGAATCAGTTTACA+AGG + chr5.3:10820477-10820496 MS.gene047723:CDS 35.0%
GCATGATTTCATACTTGTCT+GGG + chr5.3:10819897-10819916 MS.gene047723:intron 35.0%
GCATTAGACCTGAAAATGTT+TGG - chr5.3:10818340-10818359 None:intergenic 35.0%
GCCTTTACCAAAATGTTAAG+GGG - chr5.3:10819771-10819790 None:intergenic 35.0%
GTAGCTATGTACCAGAAATA+GGG + chr5.3:10819576-10819595 MS.gene047723:intron 35.0%
GTATGAAATGGATGTGATCA+TGG + chr5.3:10820423-10820442 MS.gene047723:CDS 35.0%
GTCTATGAGTATGCTGATAA+TGG + chr5.3:10820643-10820662 MS.gene047723:CDS 35.0%
TCACAATGTGATCATGTAGA+TGG + chr5.3:10817780-10817799 MS.gene047723:intron 35.0%
TCATCTCATTCAATCGTTCT+TGG + chr5.3:10819414-10819433 MS.gene047723:intron 35.0%
TCTAAGCACAAAGTAACAAG+CGG + chr5.3:10818794-10818813 MS.gene047723:intron 35.0%
TCTTATTACTTATGTGTGGC+AGG + chr5.3:10820048-10820067 MS.gene047723:intron 35.0%
TGAAGGATTTCTTAAGGATG+TGG + chr5.3:10817644-10817663 MS.gene047723:CDS 35.0%
TGACCAAGTGAATACAATGA+AGG - chr5.3:10818972-10818991 None:intergenic 35.0%
TGGAATATTACCTAGTCGAA+CGG + chr5.3:10817593-10817612 MS.gene047723:CDS 35.0%
TTGTCAGCTAACATTTCAAC+TGG - chr5.3:10820118-10820137 None:intergenic 35.0%
TTGTGCTTAGATTTCATGCA+TGG - chr5.3:10818785-10818804 None:intergenic 35.0%
! ACTGCAGATAAGTTACTTTG+AGG + chr5.3:10820370-10820389 MS.gene047723:intron 35.0%
! CAGTATTCGGTTCTAATTGA+AGG + chr5.3:10817510-10817529 MS.gene047723:CDS 35.0%
! CCAGATATCCAAACATTTTC+AGG + chr5.3:10818329-10818348 MS.gene047723:CDS 35.0%
! GAAGATGGTTGATCAAGTTT+TGG - chr5.3:10820199-10820218 None:intergenic 35.0%
! GTTAATGAGATGCAAGTTGA+TGG + chr5.3:10817573-10817592 MS.gene047723:CDS 35.0%
! GTTCTAATTGAAGGTTTGGT+TGG + chr5.3:10817519-10817538 MS.gene047723:CDS 35.0%
! TTCGGTTCTAATTGAAGGTT+TGG + chr5.3:10817515-10817534 MS.gene047723:CDS 35.0%
! TTCTATTGATAGCAGTGATG+AGG + chr5.3:10817719-10817738 MS.gene047723:intron 35.0%
! TTGTTTGCCCCTTAACATTT+TGG + chr5.3:10819761-10819780 MS.gene047723:intron 35.0%
! TTTCTGGTACATAGCTACTT+CGG - chr5.3:10819574-10819593 None:intergenic 35.0%
!! AAGTTACTTTGAGGTGTTTC+AGG + chr5.3:10820379-10820398 MS.gene047723:intron 35.0%
!! AGTTTTGGTAAACTTGTCAC+AGG - chr5.3:10820184-10820203 None:intergenic 35.0%
!! ATAATGGATCACTTGAAGAG+TGG + chr5.3:10820659-10820678 MS.gene047723:CDS 35.0%
!! CAATGATGGAAACTGTTTTC+TGG + chr5.3:10820621-10820640 MS.gene047723:CDS 35.0%
!! GTTTTGGTAAACTTGTCACA+GGG - chr5.3:10820183-10820202 None:intergenic 35.0%
!! TTACTTCTAGCTTAACCAGT+GGG - chr5.3:10819355-10819374 None:intergenic 35.0%
!!! AATCGTTCTTGGCTTGTTTT+CGG + chr5.3:10819425-10819444 MS.gene047723:intron 35.0%
!!! ACTGTGATTTATTTTGGGAG+GGG + chr5.3:10818840-10818859 MS.gene047723:intron 35.0%
!!! ACTTAGAAGTTTTAGGTCAC+CGG + chr5.3:10817929-10817948 MS.gene047723:CDS 35.0%
!!! GACATGGGTCACTTTTTTTT+AGG - chr5.3:10819396-10819415 None:intergenic 35.0%
AATTGCAACATCCATGGCTA+TGG - chr5.3:10820749-10820768 None:intergenic 40.0%
ACCTCTATCATATAGCCCAA+TGG - chr5.3:10818755-10818774 None:intergenic 40.0%
ACTTGAAGAGTGGTTGTTCT+CGG + chr5.3:10820669-10820688 MS.gene047723:CDS 40.0%
ATAGCCATGGATGTTGCAAT+TGG + chr5.3:10820748-10820767 MS.gene047723:CDS 40.0%
ATAGCCCAATGGATAACTCT+AGG - chr5.3:10818744-10818763 None:intergenic 40.0%
ATCAGGACTGCAATTCTGTA+AGG - chr5.3:10817850-10817869 None:intergenic 40.0%
ATCGTGTATGGACACCAAAT+TGG + chr5.3:10819831-10819850 MS.gene047723:intron 40.0%
ATGTTATCCAACCCTATTCG+AGG - chr5.3:10819265-10819284 None:intergenic 40.0%
ATTAATCCCTCGAATAGGGT+TGG + chr5.3:10819255-10819274 MS.gene047723:intron 40.0%
ATTCTGCAGAAGGTAAACCA+TGG + chr5.3:10820565-10820584 MS.gene047723:CDS 40.0%
ATTGTTTGAAGGGATTTGCC+CGG + chr5.3:10817671-10817690 MS.gene047723:CDS 40.0%
CAAAGGAGAGTAGGTAAGAA+GGG + chr5.3:10819485-10819504 MS.gene047723:intron 40.0%
CACTCTTGATTCTTTCATCC+GGG - chr5.3:10817692-10817711 None:intergenic 40.0%
CAGTATACGTACACAAGTGA+TGG - chr5.3:10820307-10820326 None:intergenic 40.0%
CGCATGATTTCATACTTGTC+TGG + chr5.3:10819896-10819915 MS.gene047723:intron 40.0%
CTGTATAAGGTCCTGATAGA+AGG + chr5.3:10818446-10818465 MS.gene047723:CDS 40.0%
CTTCACTAGCAACTCTTTGA+TGG - chr5.3:10818552-10818571 None:intergenic 40.0%
GAAATGGATGTGATCATGGA+AGG + chr5.3:10820427-10820446 MS.gene047723:CDS 40.0%
GAACATTAACCAAGTGTGGA+AGG + chr5.3:10818255-10818274 MS.gene047723:CDS 40.0%
GACTACCATTCAGAACCATA+AGG + chr5.3:10818105-10818124 MS.gene047723:CDS 40.0%
GATTCACTTAAAACCTTGGC+TGG + chr5.3:10817803-10817822 MS.gene047723:intron 40.0%
GGAGCTAAAAATTCTGCAGA+AGG + chr5.3:10820555-10820574 MS.gene047723:CDS 40.0%
GGGCAAACAAGCAAAAGATA+TGG - chr5.3:10819751-10819770 None:intergenic 40.0%
GTTGACACTTCCAGTTACAT+AGG - chr5.3:10819652-10819671 None:intergenic 40.0%
TCACAGGGATCAAAACTGAA+CGG - chr5.3:10820168-10820187 None:intergenic 40.0%
TCAGAGAATAACCATAGCCA+TGG + chr5.3:10820735-10820754 MS.gene047723:CDS 40.0%
TCCATTGGGCTATATGATAG+AGG + chr5.3:10818751-10818770 MS.gene047723:intron 40.0%
TCGTGTATGGACACCAAATT+GGG + chr5.3:10819832-10819851 MS.gene047723:intron 40.0%
TGTGTGGAATTTCTTCTGCT+GGG + chr5.3:10817956-10817975 MS.gene047723:CDS 40.0%
TGTTATCCAACCCTATTCGA+GGG - chr5.3:10819264-10819283 None:intergenic 40.0%
TTGCATTACCTGGTCATGTA+TGG + chr5.3:10818651-10818670 MS.gene047723:intron 40.0%
! CGTGCAGAAACTCTTTTCAA+TGG + chr5.3:10818391-10818410 MS.gene047723:CDS 40.0%
! GGGGTTGCCAAAAAGTTTTA+AGG + chr5.3:10818859-10818878 MS.gene047723:intron 40.0%
! TTTTCAATGGTCAGACAGAG+CGG + chr5.3:10818404-10818423 MS.gene047723:CDS 40.0%
!! CTTACTTCTAGCTTAACCAG+TGG - chr5.3:10819356-10819375 None:intergenic 40.0%
!! GCCCCTTAACATTTTGGTAA+AGG + chr5.3:10819767-10819786 MS.gene047723:intron 40.0%
!! GGTAAAGGCATCAAGTTAGA+TGG + chr5.3:10819782-10819801 MS.gene047723:intron 40.0%
!! TTCTGGTTCCATACCTGATT+CGG + chr5.3:10818526-10818545 MS.gene047723:CDS 40.0%
!! TTTGTTATTGCAGCAGGTGA+AGG + chr5.3:10817620-10817639 MS.gene047723:CDS 40.0%
AAATGCTGATGCTGCTCTGA+AGG + chr5.3:10818157-10818176 MS.gene047723:CDS 45.0%
AACAAACTCACCGTTCGACT+AGG - chr5.3:10817606-10817625 None:intergenic 45.0%
ACAGAATTGCAGTCCTGATG+AGG + chr5.3:10817851-10817870 MS.gene047723:intron 45.0%
ACATGACCAGGTAATGCAAG+TGG - chr5.3:10818650-10818669 None:intergenic 45.0%
ACCTTATACAGATACGCGTC+TGG - chr5.3:10818437-10818456 None:intergenic 45.0%
AGACTCAAGCAAAGGAGAGT+AGG + chr5.3:10819476-10819495 MS.gene047723:intron 45.0%
AGGGATCAAAACTGAACGGT+CGG - chr5.3:10820164-10820183 None:intergenic 45.0%
ATCAAGCATGTCCAGGGTAT+CGG - chr5.3:10818285-10818304 None:intergenic 45.0%
ATCGGAATTCCTTCCACACT+TGG - chr5.3:10818267-10818286 None:intergenic 45.0%
CAAAGTTCGTGTGGACAACT+AGG + chr5.3:10817892-10817911 MS.gene047723:CDS 45.0%
CAGACCAATTGCAACATCCA+TGG - chr5.3:10820755-10820774 None:intergenic 45.0%
CAGGAATTAGCTCGTTCTGA+TGG + chr5.3:10818938-10818957 MS.gene047723:intron 45.0%
CAGTGATGAGGATGAGAATG+AGG + chr5.3:10817731-10817750 MS.gene047723:intron 45.0%
CATCTCATCAAGCATGTCCA+GGG - chr5.3:10818291-10818310 None:intergenic 45.0%
CTGTGTGGAATTTCTTCTGC+TGG + chr5.3:10817955-10817974 MS.gene047723:CDS 45.0%
GCAAAGGAGAGTAGGTAAGA+AGG + chr5.3:10819484-10819503 MS.gene047723:intron 45.0%
GCTCTCAACACATCAACCAA+AGG - chr5.3:10819036-10819055 None:intergenic 45.0%
GGTGCCTAGAGTTATCCATT+GGG + chr5.3:10818737-10818756 MS.gene047723:intron 45.0%
GGTGTGTCTTCTGACAATGA+TGG + chr5.3:10820607-10820626 MS.gene047723:CDS 45.0%
TCATCTCATCAAGCATGTCC+AGG - chr5.3:10818292-10818311 None:intergenic 45.0%
! AACTCTTTGATGGCCGAATC+AGG - chr5.3:10818542-10818561 None:intergenic 45.0%
! ATTCGGTGGTTTCGCTTACA+TGG + chr5.3:10820710-10820729 MS.gene047723:CDS 45.0%
! GATGAGGTATCAGCACTAGA+GGG + chr5.3:10817867-10817886 MS.gene047723:CDS 45.0%
! TGATGAGGTATCAGCACTAG+AGG + chr5.3:10817866-10817885 MS.gene047723:CDS 45.0%
! TTTGATGGCCGAATCAGGTA+TGG - chr5.3:10818537-10818556 None:intergenic 45.0%
!! GGTGAGTTTGTTATTGCAGC+AGG + chr5.3:10817614-10817633 MS.gene047723:CDS 45.0%
!! TCTAGTGCTGATACCTCATC+AGG - chr5.3:10817867-10817886 None:intergenic 45.0%
!! TGCTGACTTCTGCAACTTGA+GGG + chr5.3:10819070-10819089 MS.gene047723:intron 45.0%
AGTTGCTAGTGAAGAGCCTC+TGG + chr5.3:10818558-10818577 MS.gene047723:CDS 50.0%
CAAGTCAACAAGAGCTGCAC+TGG + chr5.3:10818475-10818494 MS.gene047723:CDS 50.0%
CAAGTTGCAGAAGTCAGCAG+AGG - chr5.3:10819069-10819088 None:intergenic 50.0%
CAGCTAGCTGACATCGTGTA+TGG + chr5.3:10819819-10819838 MS.gene047723:intron 50.0%
CATACACGATGTCAGCTAGC+TGG - chr5.3:10819821-10819840 None:intergenic 50.0%
CTGACAGTCCATACATGACC+AGG - chr5.3:10818662-10818681 None:intergenic 50.0%
GAAAGAAGGTAGACGGAGAG+AGG + chr5.3:10818580-10818599 MS.gene047723:CDS 50.0%
GAATTCGAACTCGAACCCAC+TGG + chr5.3:10819337-10819356 MS.gene047723:intron 50.0%
GACCAGGTAATGCAAGTGGA+AGG - chr5.3:10818646-10818665 None:intergenic 50.0%
GAGCTGCGAGGAAGTAAATG+TGG + chr5.3:10818619-10818638 MS.gene047723:CDS 50.0%
GAGGATGAGAATGAGGACGA+GGG + chr5.3:10817738-10817757 MS.gene047723:intron 50.0%
GCCAGACGCGTATCTGTATA+AGG + chr5.3:10818433-10818452 MS.gene047723:CDS 50.0%
GGGTGCCTAGAGTTATCCAT+TGG + chr5.3:10818736-10818755 MS.gene047723:intron 50.0%
GTCCTTCCACTTGCATTACC+TGG + chr5.3:10818641-10818660 MS.gene047723:CDS 50.0%
GTTCGTGTGGACAACTAGGT+TGG + chr5.3:10817896-10817915 MS.gene047723:CDS 50.0%
TAAAACCTTGGCTGGATCCG+CGG + chr5.3:10817811-10817830 MS.gene047723:intron 50.0%
TCCGTCTACCTTCTTTCCAG+AGG - chr5.3:10818577-10818596 None:intergenic 50.0%
TGAGGATGAGAATGAGGACG+AGG + chr5.3:10817737-10817756 MS.gene047723:intron 50.0%
TGGAAGGAATTCCGATACCC+TGG + chr5.3:10818271-10818290 MS.gene047723:CDS 50.0%
TTAGGTCACCGGATACTGTG+TGG + chr5.3:10817940-10817959 MS.gene047723:CDS 50.0%
TTGCAGCAGGTGAAGGATGA+AGG + chr5.3:10817627-10817646 MS.gene047723:CDS 50.0%
! GCCTCTGGAAAGAAGGTAGA+CGG + chr5.3:10818573-10818592 MS.gene047723:CDS 50.0%
! GCTGACTTCTGCAACTTGAG+GGG + chr5.3:10819071-10819090 MS.gene047723:intron 50.0%
! GTGAAGAGCCTCTGGAAAGA+AGG + chr5.3:10818566-10818585 MS.gene047723:CDS 50.0%
! TAGAGGGTGCAAAGTTCGTG+TGG + chr5.3:10817883-10817902 MS.gene047723:CDS 50.0%
!! CAGGACATGAGTTGATGCTC+AGG + chr5.3:10818919-10818938 MS.gene047723:intron 50.0%
!! CTGCTGACTTCTGCAACTTG+AGG + chr5.3:10819069-10819088 MS.gene047723:intron 50.0%
ACGTCCATGTCGCGCTAGAA+GGG - chr5.3:10818036-10818055 None:intergenic 55.0%
AGCTGTTGAAGAGAGCTGCG+AGG + chr5.3:10818607-10818626 MS.gene047723:CDS 55.0%
ATGACCCTTCTAGCGCGACA+TGG + chr5.3:10818029-10818048 MS.gene047723:CDS 55.0%
GATGAGAATGAGGACGAGGG+TGG + chr5.3:10817741-10817760 MS.gene047723:intron 55.0%
GCAGCTCTCTTCAACAGCTG+CGG - chr5.3:10818606-10818625 None:intergenic 55.0%
TACGTCCATGTCGCGCTAGA+AGG - chr5.3:10818037-10818056 None:intergenic 55.0%
! AAGGCACTAGCCAAAGACCG+CGG - chr5.3:10817831-10817850 None:intergenic 55.0%
!! CAACAAGAGCTGCACTGGCT+TGG + chr5.3:10818480-10818499 MS.gene047723:CDS 55.0%
AAAGACCGCGGATCCAGCCA+AGG - chr5.3:10817819-10817838 None:intergenic 60.0%
CACGATGTCAGCTAGCTGGC+TGG - chr5.3:10819817-10819836 None:intergenic 60.0%
TGCTGGGTTGCTGATCGACC+TGG + chr5.3:10817972-10817991 MS.gene047723:CDS 60.0%
TTGGCTGGATCCGCGGTCTT+TGG + chr5.3:10817818-10817837 MS.gene047723:intron 60.0%


Chromosome Type Strat End Strand Name
chr5.3 gene 10817486 10820801 10817486 ID=MS.gene047723
chr5.3 mRNA 10817486 10820801 10817486 ID=MS.gene047723.t1;Parent=MS.gene047723
chr5.3 exon 10817486 10817710 10817486 ID=MS.gene047723.t1.exon1;Parent=MS.gene047723.t1
chr5.3 CDS 10817486 10817710 10817486 ID=cds.MS.gene047723.t1;Parent=MS.gene047723.t1
chr5.3 exon 10817855 10818667 10817855 ID=MS.gene047723.t1.exon2;Parent=MS.gene047723.t1
chr5.3 CDS 10817855 10818667 10817855 ID=cds.MS.gene047723.t1;Parent=MS.gene047723.t1
chr5.3 exon 10820070 10820262 10820070 ID=MS.gene047723.t1.exon3;Parent=MS.gene047723.t1
chr5.3 CDS 10820070 10820262 10820070 ID=cds.MS.gene047723.t1;Parent=MS.gene047723.t1
chr5.3 exon 10820401 10820801 10820401 ID=MS.gene047723.t1.exon4;Parent=MS.gene047723.t1
chr5.3 CDS 10820401 10820801 10820401 ID=cds.MS.gene047723.t1;Parent=MS.gene047723.t1
Gene Sequence

>MS.gene047723

ATGAGGATTAAACGTACTTTGAAACAGTATTCGGTTCTAATTGAAGGTTTGGTTGGTAGTAAAATGTTTGATGAAGTTGGAGTTTTAGTTAATGAGATGCAAGTTGATGGAATATTACCTAGTCGAACGGTGAGTTTGTTATTGCAGCAGGTGAAGGATGAAGGATTTCTTAAGGATGTGGATGAATTGTTTGAAGGGATTTGCCCGGATGAAAGAATCAAGAGTGTAAGTTTTTCTATTGATAGCAGTGATGAGGATGAGAATGAGGACGAGGGTGGAAATGAGAATGAAGTTTCACAATGTGATCATGTAGATGGGATTCACTTAAAACCTTGGCTGGATCCGCGGTCTTTGGCTAGTGCCTTACAGAATTGCAGTCCTGATGAGGTATCAGCACTAGAGGGTGCAAAGTTCGTGTGGACAACTAGGTTGGTATGCAAGATACTTAGAAGTTTTAGGTCACCGGATACTGTGTGGAATTTCTTCTGCTGGGTTGCTGATCGACCTGGATTTACTCATAATATATACACAGTGCAAAGAATCATGACCCTTCTAGCGCGACATGGACGTACTGAATTAGTTGATAGACTCATCTTGAAGATCAGAATAGAGGGAATGAGACTACCATTCAGAACCATAAGGTTAATCATTGACTTTTATGGGATTTCAAAAAATGCTGATGCTGCTCTGAAGGTTTTCAACAATGATCGAATACTTTGTGGGTCTATATCAAAAGTTAACTTGATGCTTCTGTATTCCTCTCTTTTAAGAACATTAACCAAGTGTGGAAGGAATTCCGATACCCTGGACATGCTTGATGAGATGATTTTAAATGGCATTTGCCCAGATATCCAAACATTTTCAGGTCTAATGCAGTATTTTTCACAACTTGGAGACATTAAAACCGTGCAGAAACTCTTTTCAATGGTCAGACAGAGCGGTTTCGAGCCAGACGCGTATCTGTATAAGGTCCTGATAGAAGGTTATTGCAAGTCAACAAGAGCTGCACTGGCTTGGAGACTATTTGAAGATATGAAGAATTCTGGTTCCATACCTGATTCGGCCATCAAAGAGTTGCTAGTGAAGAGCCTCTGGAAAGAAGGTAGACGGAGAGAGGCCGCAGCTGTTGAAGAGAGCTGCGAGGAAGTAAATGTGGTCCTTCCACTTGCATTACCTGGTCATGTATGGACTGTCAGCTCTGAAGATCTCACAAAAGTCTATAACATTTATTCAAATAGTTTAGTTTCAAAGGGTGCCTAGAGTTATCCATTGGGCTATATGATAGAGGTGTACTTTCCATGCATGAAATCTAAGCACAAAGTAACAAGCGGAAAGCAATAACCAAGTTCCTTAAACTGTGATTTATTTTGGGAGGGGTTGCCAAAAAGTTTTAAGGTGCAGTAATTTTTTGAGTTTTGAGAATGTATTATTGGCAGGACATGAGTTGATGCTCAGGAATTAGCTCGTTCTGATGGATATCGATCCTTCATTGTATTCACTTGGTCAAGTGCAAGAAATCATCTTTGCACAATCATATAATGAATGGACCTTTGGTTGATGTGTTGAGAGCTACAATCAGTCCTCTGCTGACTTCTGCAACTTGAGGGGAATCTAATGATTGTCTTATTGCAATTAACAATTCCTTCTAATTTTCTTACAAAAAGAGTTGGTTACAAAATCTCATCTAATATATTGTTTTGATATATTGTTTTGAGTTCCTCTTTTTTTTTTGTTGGTGTAAAAGGGTATATCTTTTCGCAACTCTGAATATTAATCCCTCGAATAGGGTTGGATAACATGAACGACAAAGTTGTTTCTTAAGAGTTTTAACACCGTTATATTCTTATGGCAGAATTCGAACTCGAACCCACTGGTTAAGCTAGAAGTAAGAAGAGACCCATGCTATGCCTAAAAAAAAGTGACCCATGTCATCTCATTCAATCGTTCTTGGCTTGTTTTCGGTTTAGATGAATATGAAGTACAAAAAGCTAGACTCAAGCAAAGGAGAGTAGGTAAGAAGGGCATCTTATTATTTTTAATATATTAGATGTCAAGCTTATGTGGCGATGTAAACACTGTTTCTATCCGAAGTAGCTATGTACCAGAAATAGGGAACAAATAATATAAATTGTGAGTTTGTCAATGTGTTTTAATATATTGAAACCTATGTAACTGGAAGTGTCAACATTGTAAGCTGTTCATTGCCTGTATTATATTATAATTGCATATATATAATGGCATTAGCCTTTGTTAAACGTTAAACCATATCTTTTGCTTGTTTGCCCCTTAACATTTTGGTAAAGGCATCAAGTTAGATGGTATTATGTACCAGCCAGCTAGCTGACATCGTGTATGGACACCAAATTGGGTTATAATACCATATTATTCTTACCATCTTTATTATATTCTGCGCATGATTTCATACTTGTCTGGGATTTGCCAACAGTGTCTAAGATTTGAAAAAGAAAAATAGTAGAACTAATGACAGAGACTGTGTCTAAGATTTCATACTTTATTCTGCAAGTGCCCTTCAAAGAATCAATTGAACAAAGGAATAAAGTATCTTATTACTTATGTGTGGCAGGATAACGACAATGTTACCCTTGTTAGTTCAAAGTTTGGTGCATCACCAGTTGAAATGTTAGCTGACAACAATCATAACTTCACTGCTTCAACCGACCGTTCAGTTTTGATCCCTGTGACAAGTTTACCAAAACTTGATCAACCATCTTCAAATGGAAGAAAAAGCAGCAGTCAAAATCTGGCTCTTATAATTGGTATTAGCCTAGGAAGTGCTTTTTTCATTTTAGTTTTAAGACCATCACTTGTGTACGTATACTGTCTCAAAATGAAGAGATTGAATAGAAGTACTTCATTGTCCGAGACTGCAGATAAGTTACTTTGAGGTGTTTCAGGTTATGTAAGCAAGCCAACAATGTATGAAATGGATGTGATCATGGAAGGTACAATGAATCTGAGTGAGAATTGTAAGATTGGTGAATCAGTTTACAAGGCTAATATAGATGGTAGAGTTTTAGCAGTGAAAAAAATCAAAAAAGATGCTTCTGAGGAGCTAAAAATTCTGCAGAAGGTAAACCATGGAAATCTTGTGAAACTAATGGGTGTGTCTTCTGACAATGATGGAAACTGTTTTCTGGTCTATGAGTATGCTGATAATGGATCACTTGAAGAGTGGTTGTTCTCGGAATCTTTGAAAACTTCAAATTCGGTGGTTTCGCTTACATGGTCTCAGAGAATAACCATAGCCATGGATGTTGCAATTGGTCTGCAAATGAACATACTTATCCAAGAATAA
Protein sequence

>MS.gene047723.t1

MRIKRTLKQYSVLIEGLVGSKMFDEVGVLVNEMQVDGILPSRTVSLLLQQVKDEGFLKDVDELFEGICPDERIKSNCSPDEVSALEGAKFVWTTRLVCKILRSFRSPDTVWNFFCWVADRPGFTHNIYTVQRIMTLLARHGRTELVDRLILKIRIEGMRLPFRTIRLIIDFYGISKNADAALKVFNNDRILCGSISKVNLMLLYSSLLRTLTKCGRNSDTLDMLDEMILNGICPDIQTFSGLMQYFSQLGDIKTVQKLFSMVRQSGFEPDAYLYKVLIEGYCKSTRAALAWRLFEDMKNSGSIPDSAIKELLVKSLWKEGRRREAAAVEESCEEVNVVLPLALPGHDNDNVTLVSSKFGASPVEMLADNNHNFTASTDRSVLIPVTSLPKLDQPSSNGRKSSSQNLALIIGYVSKPTMYEMDVIMEGTMNLSENCKIGESVYKANIDGRVLAVKKIKKDASEELKILQKVNHGNLVKLMGVSSDNDGNCFLVYEYADNGSLEEWLFSESLKTSNSVVSLTWSQRITIAMDVAIGLQMNILIQE