AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene047757

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene047757.t1 MTR_5g019680 93.269 208 13 1 1 208 1 207 1.03e-134 376
MS.gene047757.t1 MTR_5g019650 81.982 222 27 3 1 210 1 221 1.98e-118 335
MS.gene047757.t1 MTR_4g107650 38.776 147 73 3 31 160 62 208 1.06e-22 94.0
MS.gene047757.t1 MTR_3g086790 60.811 74 29 0 54 127 60 133 5.60e-22 91.7
MS.gene047757.t1 MTR_6g007647 47.273 110 49 2 54 156 33 140 6.33e-22 90.5
MS.gene047757.t1 MTR_6g007647 47.273 110 49 2 54 156 67 174 9.72e-22 90.5
MS.gene047757.t1 MTR_8g089895 56.250 80 35 0 45 124 45 124 1.01e-21 90.9
MS.gene047757.t1 MTR_6g011610 50.505 99 49 0 45 143 87 185 1.50e-20 87.0
MS.gene047757.t1 MTR_6g011610 50.505 99 49 0 45 143 68 166 1.84e-20 86.7
MS.gene047757.t1 MTR_1g061660 45.545 101 55 0 54 154 59 159 2.04e-20 85.9
MS.gene047757.t1 MTR_5g038280 60.563 71 28 0 54 124 87 157 3.18e-20 87.0
MS.gene047757.t1 MTR_8g468210 44.898 98 54 0 46 143 69 166 4.80e-20 85.9
MS.gene047757.t1 MTR_5g039000 44.737 114 58 1 46 159 69 177 7.26e-20 85.5
MS.gene047757.t1 MTR_3g092150 47.959 98 44 1 56 153 40 130 1.00e-19 84.3
MS.gene047757.t1 MTR_8g469430 58.571 70 29 0 54 123 89 158 1.19e-19 85.1
MS.gene047757.t1 MTR_7g103340 45.918 98 53 0 48 145 57 154 6.12e-19 82.0
MS.gene047757.t1 MTR_3g080100 43.396 106 60 0 48 153 14 119 6.79e-19 81.6
MS.gene047757.t1 MTR_3g080100 44.660 103 57 0 51 153 56 158 1.14e-18 81.6
MS.gene047757.t1 MTR_8g026960 43.478 115 65 0 58 172 38 152 2.24e-17 78.2
MS.gene047757.t1 MTR_7g010020 47.778 90 47 0 54 143 80 169 1.16e-15 73.9
MS.gene047757.t1 MTR_4g084750 43.564 101 43 1 54 154 65 151 1.40e-13 67.0
MS.gene047757.t1 MTR_4g100550 43.564 101 43 1 54 154 120 206 2.24e-13 67.8
MS.gene047757.t1 MTR_8g006705 45.263 95 47 1 54 143 146 240 7.69e-13 66.2
MS.gene047757.t1 MTR_1g054285 38.938 113 55 1 42 154 142 240 1.32e-12 65.5
MS.gene047757.t1 MTR_2g061030 38.017 121 61 1 34 154 180 286 1.68e-12 65.5
MS.gene047757.t1 MTR_4g097600 45.263 95 47 1 54 143 127 221 1.77e-12 65.1
MS.gene047757.t1 MTR_1g017090 42.574 101 44 1 54 154 130 216 1.89e-12 65.1
MS.gene047757.t1 MTR_7g093430 40.566 106 49 1 49 154 155 246 1.00e-11 63.2
MS.gene047757.t1 MTR_5g014890 45.263 95 47 1 54 143 123 217 1.61e-11 62.4
MS.gene047757.t1 MTR_5g013010 43.158 95 49 1 54 143 136 230 6.26e-11 60.8
MS.gene047757.t1 MTR_3g103590 43.836 73 41 0 52 124 143 215 6.40e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene047757.t1 AT4G36740 52.133 211 91 7 7 210 10 217 1.31e-57 181
MS.gene047757.t1 AT4G36740 52.607 211 89 8 7 210 10 216 5.45e-57 179
MS.gene047757.t1 AT2G18550 45.575 226 101 9 1 210 1 220 6.51e-57 179
MS.gene047757.t1 AT5G66700 46.818 220 103 4 5 210 9 228 9.99e-48 156
MS.gene047757.t1 AT3G01470 33.333 207 108 5 2 178 13 219 3.63e-24 96.7
MS.gene047757.t1 AT1G69780 38.961 154 80 3 2 143 23 174 1.76e-23 95.5
MS.gene047757.t1 AT2G22430 64.789 71 25 0 54 124 62 132 6.79e-22 91.7
MS.gene047757.t1 AT4G40060 63.380 71 26 0 54 124 59 129 7.49e-22 90.9
MS.gene047757.t1 AT5G65310 57.143 77 33 0 43 119 43 119 2.94e-21 89.4
MS.gene047757.t1 AT5G65310 57.143 77 33 0 43 119 61 137 3.40e-21 89.7
MS.gene047757.t1 AT1G26960 41.912 136 74 1 54 184 71 206 5.22e-21 88.2
MS.gene047757.t1 AT5G53980 36.552 145 90 1 45 187 2 146 1.29e-20 84.7
MS.gene047757.t1 AT2G46680 48.000 100 51 1 48 146 26 125 5.30e-20 85.5
MS.gene047757.t1 AT5G03790 39.683 126 75 1 14 139 38 162 5.95e-20 84.7
MS.gene047757.t1 AT2G46680 45.370 108 52 1 48 155 26 126 7.32e-20 85.1
MS.gene047757.t1 AT5G03790 40.496 121 71 1 19 139 43 162 1.07e-19 83.2
MS.gene047757.t1 AT2G36610 45.370 108 51 2 46 145 63 170 4.79e-19 81.3
MS.gene047757.t1 AT3G01220 51.852 81 38 1 45 124 77 157 4.70e-18 80.5
MS.gene047757.t1 AT3G61890 44.444 99 55 0 57 155 33 131 4.82e-18 79.7
MS.gene047757.t1 AT5G15150 58.209 67 28 0 54 120 115 181 7.90e-18 80.5
MS.gene047757.t1 AT1G27045 40.152 132 66 1 52 170 15 146 2.14e-17 76.6
MS.gene047757.t1 AT1G27045 40.152 132 66 1 52 170 23 154 2.35e-17 76.6
MS.gene047757.t1 AT1G27045 40.152 132 66 1 52 170 23 154 2.35e-17 76.6
MS.gene047757.t1 AT1G27045 42.149 121 57 1 52 159 66 186 3.09e-17 77.4
MS.gene047757.t1 AT1G27045 55.882 68 30 0 52 119 66 133 3.05e-16 75.1
MS.gene047757.t1 AT2G22800 45.161 93 46 1 54 141 113 205 1.40e-12 65.5
MS.gene047757.t1 AT4G16780 41.905 105 51 2 44 143 124 223 2.97e-12 64.7
MS.gene047757.t1 AT2G01430 37.607 117 55 2 54 166 139 241 4.06e-12 63.9
MS.gene047757.t1 AT5G47370 35.659 129 78 1 20 143 96 224 1.01e-11 63.2
MS.gene047757.t1 AT4G17460 40.385 104 57 1 45 143 126 229 1.53e-11 62.4
MS.gene047757.t1 AT4G37790 44.086 93 47 1 54 141 126 218 1.55e-11 62.4
MS.gene047757.t1 AT5G06710 36.667 120 62 1 35 154 171 276 3.62e-11 61.6

Find 39 sgRNAs with CRISPR-Local

Find 95 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACCTTGTTGAGAAATTATT+TGG 0.079303 5.1:-11428815 None:intergenic
TCCACCTAGCCCTTCGATTC+TGG 0.220585 5.1:-11429140 None:intergenic
TGATGAACAAATGAAAATTT+TGG 0.274227 5.1:+11429020 MS.gene047757:CDS
GAACCAAACTGCAACTTGTC+TGG 0.307826 5.1:-11429118 None:intergenic
GAAGTACTAGAGCTACTATT+TGG 0.364392 5.1:-11430228 None:intergenic
ATCCCAGACAAGTTGCAGTT+TGG 0.404850 5.1:+11429115 MS.gene047757:CDS
TTCTTACTACGCTTGCGTCT+TGG 0.426044 5.1:-11428940 None:intergenic
TATAAAGATTAATCCATTCC+TGG 0.431532 5.1:-11430368 None:intergenic
ACCTTGTTGAGAAATTATTT+GGG 0.435398 5.1:-11428814 None:intergenic
TTCATCAATTTCACAATCCA+TGG 0.447091 5.1:+11430248 MS.gene047757:CDS
ATTTGGGTGTATTCACAAGC+TGG 0.458844 5.1:-11428798 None:intergenic
ACTGAGACATAAGCATCATT+TGG 0.463969 5.1:-11428770 None:intergenic
TCAAATTCATCAAGTAATTG+TGG 0.464011 5.1:-11430282 None:intergenic
AGAGGTATACCTTTGTTTCA+AGG 0.464969 5.1:-11429236 None:intergenic
GATAGACTTGCAATGGAGCT+TGG 0.475779 5.1:+11429087 MS.gene047757:CDS
AAGGAGACACTTCTCAAGAA+TGG 0.492858 5.1:-11429217 None:intergenic
TTGTGGGTCCACTACTTCCA+TGG 0.493534 5.1:-11430265 None:intergenic
CAAATTCATCAAGTAATTGT+GGG 0.494706 5.1:-11430281 None:intergenic
TAAACTTGAGTCAGAGAAGA+AGG 0.499532 5.1:+11429065 MS.gene047757:CDS
AACCAAACTGCAACTTGTCT+GGG 0.501567 5.1:-11429117 None:intergenic
CAGTTTGGTTCCAGAATCGA+AGG 0.504708 5.1:+11429130 MS.gene047757:CDS
TTTGGGTGTATTCACAAGCT+GGG 0.519334 5.1:-11428797 None:intergenic
GGTTCCAGAATCGAAGGGCT+AGG 0.526167 5.1:+11429136 MS.gene047757:CDS
ATTACTTCAACGGCCAGGAA+TGG 0.529342 5.1:+11430355 MS.gene047757:CDS
TTGAAGTAATATGTCGCATC+CGG 0.533058 5.1:-11430342 None:intergenic
GCAGCTTTCTGAGGCAGAGA+AGG 0.540038 5.1:+11430185 MS.gene047757:CDS
GAAGAAGGATAGACTTGCAA+TGG 0.545678 5.1:+11429080 MS.gene047757:CDS
TTCACAATCCATGGAAGTAG+TGG 0.547965 5.1:+11430257 MS.gene047757:CDS
AGCTACTATTTGGCTCTCGA+AGG 0.571565 5.1:-11430218 None:intergenic
GATGCGACATATTACTTCAA+CGG 0.573154 5.1:+11430345 MS.gene047757:CDS
GCTAACAGAGCAGCTTTCTG+AGG 0.593252 5.1:+11430176 MS.gene047757:CDS
CGTAGTAAGAAGAACAAAGG+TGG 0.606299 5.1:+11428952 MS.gene047757:CDS
GAAGTGTCTCCTTGAAACAA+AGG 0.607070 5.1:+11429227 MS.gene047757:CDS
GAGACACTTCTCAAGAATGG+TGG 0.632257 5.1:-11429214 None:intergenic
GACATATTACTTCAACGGCC+AGG 0.639581 5.1:+11430350 MS.gene047757:CDS
ACCCAAATAATTTCTCAACA+AGG 0.645027 5.1:+11428813 MS.gene047757:CDS
TCCAGAATCGAAGGGCTAGG+TGG 0.655135 5.1:+11429139 MS.gene047757:CDS
AAGCGTAGTAAGAAGAACAA+AGG 0.668285 5.1:+11428949 MS.gene047757:CDS
AGTTTGGTTCCAGAATCGAA+GGG 0.690392 5.1:+11429131 MS.gene047757:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATATTAATTGAACATATA+AGG - chr5.1:11430143-11430162 None:intergenic 10.0%
!! AATATATAAAAACAAAAACA+AGG + chr5.1:11429848-11429867 MS.gene047757:intron 10.0%
!! ATAATAAATTAAATAAGAAG+CGG - chr5.1:11429267-11429286 None:intergenic 10.0%
!! TTATTAAAAATTAAAATCAG+TGG + chr5.1:11429340-11429359 MS.gene047757:intron 10.0%
!!! ATTTTTGTTATGTTTTTTTA+GGG + chr5.1:11428902-11428921 MS.gene047757:intron 10.0%
!!! TATTTTTGTTATGTTTTTTT+AGG + chr5.1:11428901-11428920 MS.gene047757:intron 10.0%
!! AAAATGAAGAAAATATTGTA+CGG - chr5.1:11429940-11429959 None:intergenic 15.0%
!!! TTTTTGTTATGTTTTTTTAG+GGG + chr5.1:11428903-11428922 MS.gene047757:intron 15.0%
!! ATTGAACATATAAGGTAATT+AGG - chr5.1:11430135-11430154 None:intergenic 20.0%
!! CACTAGTAATATAATATTGT+TGG - chr5.1:11429415-11429434 None:intergenic 20.0%
!! TCTAAGCAAAGATTATTAAA+AGG - chr5.1:11430091-11430110 None:intergenic 20.0%
!!! AAAATTTTGGAGGAAAATTT+TGG + chr5.1:11429033-11429052 MS.gene047757:CDS 20.0%
!!! ACTTTATCATTTTTCATTCA+AGG - chr5.1:11429664-11429683 None:intergenic 20.0%
!!! CTTTATCATTTTTCATTCAA+GGG - chr5.1:11429663-11429682 None:intergenic 20.0%
!!! GTACAATATTTTCTTCATTT+TGG + chr5.1:11429939-11429958 MS.gene047757:intron 20.0%
!!! TGATGAACAAATGAAAATTT+TGG + chr5.1:11429020-11429039 MS.gene047757:CDS 20.0%
!!! TTTATCATTTTTCATTCAAG+GGG - chr5.1:11429662-11429681 None:intergenic 20.0%
! AACCTTGTTGAGAAATTATT+TGG - chr5.1:11428818-11428837 None:intergenic 25.0%
! ACCAAATATTGAACAAAAAG+AGG + chr5.1:11428989-11429008 MS.gene047757:CDS 25.0%
! ACCTTGTTGAGAAATTATTT+GGG - chr5.1:11428817-11428836 None:intergenic 25.0%
! AGAAAATATTGTACGGAATT+AGG - chr5.1:11429933-11429952 None:intergenic 25.0%
! ATTCTCTCTTTCAACATTTA+GGG - chr5.1:11429589-11429608 None:intergenic 25.0%
! CAAATTCATCAAGTAATTGT+GGG - chr5.1:11430284-11430303 None:intergenic 25.0%
! GAGAACTTTAATAATGTGAA+CGG - chr5.1:11429752-11429771 None:intergenic 25.0%
! TATAAAGATTAATCCATTCC+TGG - chr5.1:11430371-11430390 None:intergenic 25.0%
! TATTCTCTCTTTCAACATTT+AGG - chr5.1:11429590-11429609 None:intergenic 25.0%
! TCAAATTCATCAAGTAATTG+TGG - chr5.1:11430285-11430304 None:intergenic 25.0%
!! TCCTCTTTTTGTTCAATATT+TGG - chr5.1:11428993-11429012 None:intergenic 25.0%
!! TGAACAAATGAAAATTTTGG+AGG + chr5.1:11429023-11429042 MS.gene047757:CDS 25.0%
AACACTAGTAACGTCAATTT+AGG + chr5.1:11429459-11429478 MS.gene047757:intron 30.0%
ACACTAGTAACGTCAATTTA+GGG + chr5.1:11429460-11429479 MS.gene047757:intron 30.0%
ACATAACATGAATGATCATG+TGG - chr5.1:11429784-11429803 None:intergenic 30.0%
ACCCAAATAATTTCTCAACA+AGG + chr5.1:11428813-11428832 MS.gene047757:CDS 30.0%
ATTGTTGGAGAAATGATGAT+TGG - chr5.1:11429400-11429419 None:intergenic 30.0%
TCTACTTCATGATAACAAGT+TGG - chr5.1:11429978-11429997 None:intergenic 30.0%
TTCATCAATTTCACAATCCA+TGG + chr5.1:11430248-11430267 MS.gene047757:CDS 30.0%
TTCTCTCTTTCAACATTTAG+GGG - chr5.1:11429588-11429607 None:intergenic 30.0%
!! AGTGTTGTTTGTTGTCTTTA+AGG - chr5.1:11429892-11429911 None:intergenic 30.0%
AAGCGTAGTAAGAAGAACAA+AGG + chr5.1:11428949-11428968 MS.gene047757:CDS 35.0%
ACTGAGACATAAGCATCATT+TGG - chr5.1:11428773-11428792 None:intergenic 35.0%
CTTTAATAATGTGAACGGCT+TGG - chr5.1:11429747-11429766 None:intergenic 35.0%
GATGCGACATATTACTTCAA+CGG + chr5.1:11430345-11430364 MS.gene047757:CDS 35.0%
TAAACTTGAGTCAGAGAAGA+AGG + chr5.1:11429065-11429084 MS.gene047757:CDS 35.0%
TTGAAAGAGAGAATAAGCAC+TGG + chr5.1:11429595-11429614 MS.gene047757:intron 35.0%
TTGAAGTAATATGTCGCATC+CGG - chr5.1:11430345-11430364 None:intergenic 35.0%
! AGAGGTATACCTTTGTTTCA+AGG - chr5.1:11429239-11429258 None:intergenic 35.0%
! GAAGTACTAGAGCTACTATT+TGG - chr5.1:11430231-11430250 None:intergenic 35.0%
! TTCATTTTGGACCTTTCTCA+AGG + chr5.1:11429952-11429971 MS.gene047757:intron 35.0%
!! TGATGATGTGTTTTTCATGC+CGG + chr5.1:11430323-11430342 MS.gene047757:CDS 35.0%
AAATAAGAAGCGGAAGCAAG+AGG - chr5.1:11429257-11429276 None:intergenic 40.0%
AACCAAACTGCAACTTGTCT+GGG - chr5.1:11429120-11429139 None:intergenic 40.0%
AAGGAGACACTTCTCAAGAA+TGG - chr5.1:11429220-11429239 None:intergenic 40.0%
ATATGCACGTTCATATGTGG+TGG - chr5.1:11429699-11429718 None:intergenic 40.0%
ATGCTACCATGTTTCTTCTC+TGG + chr5.1:11429488-11429507 MS.gene047757:intron 40.0%
ATTTGGGTGTATTCACAAGC+TGG - chr5.1:11428801-11428820 None:intergenic 40.0%
CGTAGTAAGAAGAACAAAGG+TGG + chr5.1:11428952-11428971 MS.gene047757:CDS 40.0%
CTCATATGCACGTTCATATG+TGG - chr5.1:11429702-11429721 None:intergenic 40.0%
GAAGAAGGATAGACTTGCAA+TGG + chr5.1:11429080-11429099 MS.gene047757:CDS 40.0%
TAATGAAAGAGACATGCACG+TGG - chr5.1:11430062-11430081 None:intergenic 40.0%
TATGCACGTTCATATGTGGT+GGG - chr5.1:11429698-11429717 None:intergenic 40.0%
TTCACAATCCATGGAAGTAG+TGG + chr5.1:11430257-11430276 MS.gene047757:CDS 40.0%
TTTGCTTTGTCCTGAAGAAC+CGG - chr5.1:11429628-11429647 None:intergenic 40.0%
TTTGGGTGTATTCACAAGCT+GGG - chr5.1:11428800-11428819 None:intergenic 40.0%
! ACATTGATTAGAGGGGGTAA+TGG - chr5.1:11430033-11430052 None:intergenic 40.0%
! AGTTTGGTTCCAGAATCGAA+GGG + chr5.1:11429131-11429150 MS.gene047757:CDS 40.0%
! GAAGTGTCTCCTTGAAACAA+AGG + chr5.1:11429227-11429246 MS.gene047757:CDS 40.0%
! GGTGTAGGACATTGATTAGA+GGG - chr5.1:11430041-11430060 None:intergenic 40.0%
! GTGTAGGACATTGATTAGAG+GGG - chr5.1:11430040-11430059 None:intergenic 40.0%
! TGGTGTAGGACATTGATTAG+AGG - chr5.1:11430042-11430061 None:intergenic 40.0%
! TGTAGGACATTGATTAGAGG+GGG - chr5.1:11430039-11430058 None:intergenic 40.0%
!! TAACAAGTTGGCCTTGAGAA+AGG - chr5.1:11429966-11429985 None:intergenic 40.0%
AGACCACCAGAGAAGAAACA+TGG - chr5.1:11429497-11429516 None:intergenic 45.0%
ATCCCAGACAAGTTGCAGTT+TGG + chr5.1:11429115-11429134 MS.gene047757:CDS 45.0%
ATGAACGTGCATATGAGCTC+TGG + chr5.1:11429705-11429724 MS.gene047757:intron 45.0%
ATTACTTCAACGGCCAGGAA+TGG + chr5.1:11430355-11430374 MS.gene047757:CDS 45.0%
CTACCATGTTTCTTCTCTGG+TGG + chr5.1:11429491-11429510 MS.gene047757:intron 45.0%
GAACCAAACTGCAACTTGTC+TGG - chr5.1:11429121-11429140 None:intergenic 45.0%
GACATATTACTTCAACGGCC+AGG + chr5.1:11430350-11430369 MS.gene047757:CDS 45.0%
GAGACACTTCTCAAGAATGG+TGG - chr5.1:11429217-11429236 None:intergenic 45.0%
GATAGACTTGCAATGGAGCT+TGG + chr5.1:11429087-11429106 MS.gene047757:CDS 45.0%
TGAACGTGCATATGAGCTCT+GGG + chr5.1:11429706-11429725 MS.gene047757:intron 45.0%
TTCTTACTACGCTTGCGTCT+TGG - chr5.1:11428943-11428962 None:intergenic 45.0%
! CAGTTTGGTTCCAGAATCGA+AGG + chr5.1:11429130-11429149 MS.gene047757:CDS 45.0%
!! AATAAGCACTGGCATGCAAC+CGG + chr5.1:11429606-11429625 MS.gene047757:intron 45.0%
!! AGCTACTATTTGGCTCTCGA+AGG - chr5.1:11430221-11430240 None:intergenic 45.0%
!! GGGGTAATGGAGTTTCACTT+GGG - chr5.1:11430020-11430039 None:intergenic 45.0%
AAGAGACATGCACGTGGTGT+AGG - chr5.1:11430056-11430075 None:intergenic 50.0%
GCTAACAGAGCAGCTTTCTG+AGG + chr5.1:11430176-11430195 MS.gene047757:CDS 50.0%
TTGTGGGTCCACTACTTCCA+TGG - chr5.1:11430268-11430287 None:intergenic 50.0%
!! GGGGGTAATGGAGTTTCACT+TGG - chr5.1:11430021-11430040 None:intergenic 50.0%
GGTTCCAGAATCGAAGGGCT+AGG + chr5.1:11429136-11429155 MS.gene047757:CDS 55.0%
TCCACCTAGCCCTTCGATTC+TGG - chr5.1:11429143-11429162 None:intergenic 55.0%
TCCAGAATCGAAGGGCTAGG+TGG + chr5.1:11429139-11429158 MS.gene047757:CDS 55.0%
! TGGCATGCAACCGGTTCTTC+AGG + chr5.1:11429615-11429634 MS.gene047757:intron 55.0%
!! GCAGCTTTCTGAGGCAGAGA+AGG + chr5.1:11430185-11430204 MS.gene047757:CDS 55.0%


Chromosome Type Strat End Strand Name
chr5.1 gene 11428756 11430395 11428756 ID=MS.gene047757
chr5.1 mRNA 11428756 11430395 11428756 ID=MS.gene047757.t1;Parent=MS.gene047757
chr5.1 exon 11428756 11428834 11428756 ID=MS.gene047757.t1.exon1;Parent=MS.gene047757.t1
chr5.1 CDS 11428756 11428834 11428756 ID=cds.MS.gene047757.t1;Parent=MS.gene047757.t1
chr5.1 exon 11428923 11429248 11428923 ID=MS.gene047757.t1.exon2;Parent=MS.gene047757.t1
chr5.1 CDS 11428923 11429248 11428923 ID=cds.MS.gene047757.t1;Parent=MS.gene047757.t1
chr5.1 exon 11430168 11430395 11430168 ID=MS.gene047757.t1.exon3;Parent=MS.gene047757.t1
chr5.1 CDS 11430168 11430395 11430168 ID=cds.MS.gene047757.t1;Parent=MS.gene047757.t1
Gene Sequence

>MS.gene047757

ATGAATCATCAAGACCAAATGATGCTTATGTCTCAGTTATTCCCAGCTTGTGAATACACCCAAATAATTTCTCAACAAGGTTAGTATCATATTAAATTAATACATAACATTTTATTGTATCATAAAAATTTCTATGAAGTTATAATATTTTTGTTATGTTTTTTTAGGGGAGAAGAAGCTAAAGCCAAGACGCAAGCGTAGTAAGAAGAACAAAGGTGGAGAAAACAGTGCTAACCAAATATTGAACAAAAAGAGGAAATTGAGTGATGAACAAATGAAAATTTTGGAGGAAAATTTTGGAAATGAACATAAACTTGAGTCAGAGAAGAAGGATAGACTTGCAATGGAGCTTGGTTTAGATCCCAGACAAGTTGCAGTTTGGTTCCAGAATCGAAGGGCTAGGTGGAAGAACAAGAAACTTGAAGAAGAGTACTTAACTCTTAAAAAAATTCATGAATCCACCATTCTTGAGAAGTGTCTCCTTGAAACAAAGGTATACCTCTTGCTTCCGCTTCTTATTTAATTTATTATTGCAACTAGATACAATTTTATTAAACTATGTTAACATGTTTTTTAATTAACTATTATTAAAAATTAAAATCAGTGGATTGAATTATAACTTGACATCAAAATTTTAATTTCCAATCATCATTTCTCCAACAATATTATATTACTAGTGTTTTGTTTTTATTTGTCTCAACGCAACACTAGTAACGTCAATTTAGGGCAAGCATGCTACCATGTTTCTTCTCTGGTGGTCTTGATATTTTGTTTATTCACTATATTGTTGTTATAACTTTGTTTAAAAAAGTTGTTTGCATAGTTTAATCCCCTAAATGTTGAAAGAGAGAATAAGCACTGGCATGCAACCGGTTCTTCAGGACAAAGCAAAAAGAAAAGAAACCCCTTGAATGAAAAATGATAAAGTAGAAACTTAGACCCACCACATATGAACGTGCATATGAGCTCTGGGCTCGAAGAAATTAATCCAAGCCGTTCACATTATTAAAGTTCTCACTTCTCAGCCACATGATCATTCATGTTATGTAGATTTTCTTTAAAAAAATGCTAATGATACATAAAATTAAAAGAAATATATAAAAACAAAAACAAGGAACAGCAAAAAAATATCACCTTAAAGACAACAAACAACACTGTTTCTTTCAATTTGTTTCCTAATTCCGTACAATATTTTCTTCATTTTGGACCTTTCTCAAGGCCAACTTGTTATCATGAAGTAGAAACGTGACATACATATGTTCCCAAGTGAAACTCCATTACCCCCTCTAATCAATGTCCTACACCACGTGCATGTCTCTTTCATTATCTTAACCTTTTAATAATCTTTGCTTAGATTAGATCTCATCATCTTAACTCCTAATTACCTTATATGTTCAATTAATATTTTGTAGATGTTGAAGCTAACAGAGCAGCTTTCTGAGGCAGAGAAGGAAATTCAACGCCTTCGAGAGCCAAATAGTAGCTCTAGTACTTCATCAATTTCACAATCCATGGAAGTAGTGGACCCACAATTACTTGATGAATTTGAAGTTAATCATATATATAATGATGATGTGTTTTTCATGCCGGATGCGACATATTACTTCAACGGCCAGGAATGGATTAATCTTTATATCTAA
Protein sequence

>MS.gene047757.t1

MNHQDQMMLMSQLFPACEYTQIISQQGEKKLKPRRKRSKKNKGGENSANQILNKKRKLSDEQMKILEENFGNEHKLESEKKDRLAMELGLDPRQVAVWFQNRRARWKNKKLEEEYLTLKKIHESTILEKCLLETKMLKLTEQLSEAEKEIQRLREPNSSSSTSSISQSMEVVDPQLLDEFEVNHIYNDDVFFMPDATYYFNGQEWINLYI