AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene04810

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene04810.t1 MTR_7g092070 98.093 734 14 0 1 734 1 734 0.0 1488
MS.gene04810.t1 MTR_3g029590 64.206 718 221 15 33 731 31 731 0.0 845
MS.gene04810.t1 MTR_1g050438 53.808 604 255 12 33 630 1 586 0.0 568
MS.gene04810.t1 MTR_0728s0020 53.400 603 259 10 33 630 17 602 0.0 568
MS.gene04810.t1 MTR_5g082830 42.647 748 297 24 34 731 18 683 2.77e-163 487
MS.gene04810.t1 MTR_5g071070 41.691 686 302 14 39 678 27 660 7.54e-153 461
MS.gene04810.t1 MTR_3g435590 57.107 394 145 6 33 422 18 391 4.51e-145 433
MS.gene04810.t1 MTR_3g435590 60.377 53 21 0 623 675 416 468 2.53e-12 70.1
MS.gene04810.t1 MTR_1g075890 41.420 676 299 19 44 680 30 647 3.50e-142 432
MS.gene04810.t1 MTR_5g071070 40.952 630 274 14 95 678 1 578 8.67e-134 409
MS.gene04810.t1 MTR_3g435680 50.124 403 143 10 95 495 5 351 3.14e-110 340
MS.gene04810.t1 MTR_3g070880 39.912 456 161 11 45 490 8 360 1.25e-95 306
MS.gene04810.t1 MTR_3g464260 39.615 467 195 9 50 516 28 407 1.80e-94 303
MS.gene04810.t1 MTR_3g464280 33.943 601 245 16 62 661 32 481 1.27e-82 271
MS.gene04810.t1 MTR_6g090380 75.701 107 26 0 260 366 99 205 2.68e-57 200
MS.gene04810.t1 MTR_8g102100 57.229 166 57 2 260 417 77 236 3.65e-56 197
MS.gene04810.t1 MTR_2g090605 69.369 111 34 0 264 374 77 187 1.57e-53 191
MS.gene04810.t1 MTR_3g464270 33.971 418 202 11 263 675 8 356 2.09e-53 188
MS.gene04810.t1 MTR_3g103960 61.029 136 49 2 254 388 43 175 1.94e-52 183
MS.gene04810.t1 MTR_4g078660 66.355 107 36 0 260 366 56 162 2.13e-50 179
MS.gene04810.t1 MTR_3g464290 32.397 463 195 15 243 677 79 451 1.38e-46 172
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene04810.t1 AT2G41900 65.834 761 188 22 1 734 1 716 0.0 884
MS.gene04810.t1 AT5G12850 53.748 707 270 19 41 727 36 705 0.0 684
MS.gene04810.t1 AT5G58620 44.328 670 252 18 44 683 11 589 5.22e-162 481
MS.gene04810.t1 AT2G40140 40.311 707 257 20 43 728 29 591 1.59e-143 433
MS.gene04810.t1 AT2G40140 40.311 707 257 20 43 728 29 591 1.59e-143 433
MS.gene04810.t1 AT3G55980 47.586 435 156 9 41 461 24 400 4.89e-123 380
MS.gene04810.t1 AT3G55980 47.586 435 156 9 41 461 91 467 4.37e-122 380
MS.gene04810.t1 AT4G29190 51.389 216 93 4 220 428 36 246 1.23e-58 202
MS.gene04810.t1 AT2G19810 56.604 159 68 1 210 368 25 182 9.93e-57 197
MS.gene04810.t1 AT2G25900 72.477 109 30 0 260 368 86 194 1.05e-56 196
MS.gene04810.t1 AT2G25900 72.477 109 30 0 260 368 86 194 1.05e-56 196
MS.gene04810.t1 AT5G07500 64.463 121 43 0 246 366 34 154 9.72e-55 188
MS.gene04810.t1 AT1G03790 59.859 142 49 3 242 379 64 201 7.36e-52 185
MS.gene04810.t1 AT5G44260 60.156 128 46 2 242 368 42 165 8.83e-49 176

Find 204 sgRNAs with CRISPR-Local

Find 220 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAATAATTCTTGGTCAAAA+TGG 0.154209 7.4:+16889703 MS.gene04810:CDS
CTAGTGCTGGCTGTAATCTT+AGG 0.193223 7.4:+16888398 MS.gene04810:CDS
TTATTGCAGGCGGCTTCTTA+TGG 0.247506 7.4:+16889519 MS.gene04810:CDS
CCGTTAGCATCCACGGAATT+AGG 0.259510 7.4:-16888289 None:intergenic
GAAAGTGATTATTTCTTTAT+CGG 0.262167 7.4:+16888147 MS.gene04810:CDS
GTGAAGCTGCTTCTTGCAGC+AGG 0.273866 7.4:+16888259 MS.gene04810:CDS
AACTGAGATCAAAGAGAAAT+TGG 0.283003 7.4:+16889866 MS.gene04810:CDS
TTCTTATTCTCCTCCTTTGT+CGG 0.292786 7.4:+16888441 MS.gene04810:CDS
CGCGTGCTTATTCCCATGAT+TGG 0.294935 7.4:+16888656 MS.gene04810:CDS
AAAACAGTTGAAGTCAGATT+TGG 0.296997 7.4:-16889393 None:intergenic
ACTTTCTCGGGTCCCTTCTT+CGG 0.297219 7.4:-16888714 None:intergenic
CTTTCTCGGGTCCCTTCTTC+GGG 0.310844 7.4:-16888713 None:intergenic
TACAATGGCCGAAGCTCTTC+AGG 0.319804 7.4:-16888913 None:intergenic
ATCCCAGCCTTGCATCTTCC+TGG 0.322304 7.4:+16889129 MS.gene04810:CDS
AACTCCATGCTTGCAGCTGC+TGG 0.324417 7.4:+16889675 MS.gene04810:CDS
ATCTCAGGTGCTGCGCCAGC+TGG 0.340015 7.4:+16889897 MS.gene04810:CDS
CGGTGGATGAGGTTGGATTA+TGG 0.349552 7.4:+16888035 MS.gene04810:CDS
GCAGCCATGAGCATGTTGCC+TGG 0.353518 7.4:+16889000 MS.gene04810:CDS
TGCTGCGCCAGCTGGTTCCT+CGG 0.353578 7.4:+16889905 MS.gene04810:CDS
CTTCTTCGGGCATTCTCCCC+TGG 0.358679 7.4:-16888700 None:intergenic
CTGGCTCAGTCAATAATTCT+TGG 0.360024 7.4:+16889694 MS.gene04810:CDS
ACAGGCATGCCAACTCATTA+AGG 0.364336 7.4:-16889254 None:intergenic
CGGCCATTGTATGTTTCAAC+TGG 0.366588 7.4:+16888925 MS.gene04810:CDS
AAGAGATCATCAAGATTTGA+TGG 0.375352 7.4:-16889336 None:intergenic
CAATTGACTTCAACTTCAAC+AGG 0.377422 7.4:-16888504 None:intergenic
GTAAGGGTGCTTGCCGGCGC+GGG 0.377691 7.4:+16888770 MS.gene04810:CDS
TCAAGATTTGATGGATTCAA+TGG 0.378043 7.4:-16889327 None:intergenic
CTTGAGCCCATTGGAGAGAT+AGG 0.383762 7.4:-16889582 None:intergenic
TTGTTGCTGTTGATCATAAT+CGG 0.386100 7.4:-16889229 None:intergenic
ATTCCGAATGTATTCTTTCA+AGG 0.389840 7.4:+16888621 MS.gene04810:CDS
CTAGACTGAAGATTACTTCC+AGG 0.391284 7.4:-16889147 None:intergenic
GCTCTTCACTGTGCTGCTTC+CGG 0.395253 7.4:+16888211 MS.gene04810:CDS
GAACTCCCTCTTTCTCCTGC+TGG 0.397305 7.4:+16888526 MS.gene04810:CDS
TATCGGATGTTGATATCAAC+AGG 0.399105 7.4:+16888164 MS.gene04810:CDS
AGATGCAAGGCTGGGATGTT+TGG 0.402195 7.4:-16889123 None:intergenic
CTAATTCCGTGGATGCTAAC+GGG 0.402744 7.4:+16888290 MS.gene04810:CDS
TTCTCCCCTGGATGAACAAA+AGG 0.403658 7.4:-16888688 None:intergenic
GAGGAGCTACTTCAAATTGA+TGG 0.405740 7.4:+16888373 MS.gene04810:CDS
GATCATCTTCATTTGAGCTT+GGG 0.407859 7.4:+16889787 MS.gene04810:CDS
ACCGATAGTTAAGTGATTCA+TGG 0.410974 7.4:-16887924 None:intergenic
TGTTGATCATCATTTATTGC+AGG 0.414822 7.4:+16889506 MS.gene04810:CDS
GCCAGCTGGTTCCTCGGGTG+AGG 0.415311 7.4:+16889911 MS.gene04810:CDS
TGTCGGCTTCACCTGAGAAC+GGG 0.415939 7.4:+16888458 MS.gene04810:CDS
TGAAGCTGCTTCTTGCAGCA+GGG 0.417923 7.4:+16888260 MS.gene04810:CDS
TGATTCATGGTGTGGTTTCT+CGG 0.418912 7.4:-16887911 None:intergenic
TTTCACACAACTCTGTTGCT+TGG 0.421951 7.4:+16889094 MS.gene04810:CDS
CAATAATTCTTGGTCAAAAT+GGG 0.422094 7.4:+16889704 MS.gene04810:CDS
GTCTGTTGATCATGCTGTAT+TGG 0.422918 7.4:+16889959 MS.gene04810:CDS
TCTGTTGATCATGCTGTATT+GGG 0.426592 7.4:+16889960 MS.gene04810:CDS
TCTTATGGTGTTCAGCCATC+AGG 0.430030 7.4:+16889534 MS.gene04810:CDS
GCCCAATCCAACTTACCATT+GGG 0.431247 7.4:-16889732 None:intergenic
AAGGGCATTCAGTCCAATCA+TGG 0.433719 7.4:-16888669 None:intergenic
CAGCTGTAGTGATACTTTCT+CGG 0.440024 7.4:-16888727 None:intergenic
GCTGCGCCAGCTGGTTCCTC+GGG 0.442943 7.4:+16889906 MS.gene04810:CDS
GACTGCACCCATGATAAATC+AGG 0.445095 7.4:-16889825 None:intergenic
AATTTCTCTTTGATCTCAGT+TGG 0.445539 7.4:-16889864 None:intergenic
CGTGGAGACATTCTTCCTGA+TGG 0.449642 7.4:-16889549 None:intergenic
ACTCCACCCATGTCACCTTC+TGG 0.450662 7.4:+16889063 MS.gene04810:CDS
TTCACTGTGCTGCTTCCGGT+GGG 0.454176 7.4:+16888215 MS.gene04810:CDS
GGCAAAGAAGCAAACTCTCC+TGG 0.456158 7.4:-16888884 None:intergenic
CCCCAATGGTAAGTTGGATT+GGG 0.458669 7.4:+16889731 MS.gene04810:CDS
CTTCCAGGAAGATGCAAGGC+TGG 0.462334 7.4:-16889132 None:intergenic
TGAGCAAAGGACGCCGTTGA+TGG 0.464569 7.4:+16888093 MS.gene04810:CDS
TCAGGAAGGGATGGATCAAC+AGG 0.466570 7.4:-16888568 None:intergenic
CAAGCACCCTTACGAAAATC+AGG 0.467829 7.4:-16888760 None:intergenic
GACATCGAAGAAGGTGAGCC+AGG 0.468116 7.4:-16889018 None:intergenic
AGATCATCTTCATTTGAGCT+TGG 0.468995 7.4:+16889786 MS.gene04810:CDS
TAGTGCTGGCTGTAATCTTA+GGG 0.470828 7.4:+16888399 MS.gene04810:CDS
TTCAACTTCAACAGGAGATC+CGG 0.470845 7.4:-16888496 None:intergenic
AATTAATATGACGTGGAGAC+AGG 0.471650 7.4:-16889272 None:intergenic
TTGTCGGCTTCACCTGAGAA+CGG 0.475746 7.4:+16888457 MS.gene04810:CDS
AGGACGGTACAAATTGTTCC+AGG 0.478546 7.4:+16888866 MS.gene04810:CDS
AATGAATATGAGCACACAAA+TGG 0.478801 7.4:+16889935 MS.gene04810:CDS
GCGAGGAGCCTGATTTATCA+TGG 0.480265 7.4:+16889817 MS.gene04810:CDS
AGGAGATCCGGTGGTGGAGA+AGG 0.485489 7.4:-16888484 None:intergenic
GGAGAAGGAGACCCGTTCTC+AGG 0.488091 7.4:-16888469 None:intergenic
CTTCACTGTGCTGCTTCCGG+TGG 0.492217 7.4:+16888214 MS.gene04810:CDS
GGTGACATGGGTGGAGTGAA+TGG 0.492460 7.4:-16889057 None:intergenic
GTCAAGCACGTCTTCTGCCA+TGG 0.494988 7.4:+16888969 MS.gene04810:CDS
AAATTGGCAACTTCCATCTC+AGG 0.496278 7.4:+16889882 MS.gene04810:CDS
TGAGCCAGCAGCTGCAAGCA+TGG 0.498255 7.4:-16889679 None:intergenic
CCAGCTGGTTCCTCGGGTGA+GGG 0.498286 7.4:+16889912 MS.gene04810:CDS
AGCTGGCGCAGCACCTGAGA+TGG 0.500158 7.4:-16889895 None:intergenic
AGCCCAATCCAACTTACCAT+TGG 0.500923 7.4:-16889733 None:intergenic
CAATGCTAGAGATATTCATA+TGG 0.504807 7.4:+16889188 MS.gene04810:CDS
CCCACACTCCTGAAGAGCTT+CGG 0.505759 7.4:+16888905 MS.gene04810:CDS
CCAACCTCATCCACCGATGT+AGG 0.509535 7.4:-16888028 None:intergenic
TTGATGGTTGCTGCTACATA+TGG 0.511142 7.4:+16888109 MS.gene04810:CDS
TGTACCGTCCTTGCAGAGAC+GGG 0.511148 7.4:-16888854 None:intergenic
CAGGGGAGAATGCCCGAAGA+AGG 0.515191 7.4:+16888701 MS.gene04810:CDS
GTGGAACCTATCTCTCCAAT+GGG 0.516161 7.4:+16889576 MS.gene04810:CDS
TCAGATCCAGCAGGAGAAAG+AGG 0.517866 7.4:-16888532 None:intergenic
CAAATTGATGGTCCTAGTGC+TGG 0.518193 7.4:+16888385 MS.gene04810:CDS
AGCTGTAGTGATACTTTCTC+GGG 0.519357 7.4:-16888726 None:intergenic
TGAGAATTGTGTGTCGAAGT+TGG 0.520178 7.4:-16887887 None:intergenic
GGACCTTGAAAGAATACATT+CGG 0.520381 7.4:-16888624 None:intergenic
CCCTCACCCGAGGAACCAGC+TGG 0.525483 7.4:-16889912 None:intergenic
GAGATAGGTTCCACGTTTCG+TGG 0.525659 7.4:-16889567 None:intergenic
TCTTTCTTCTCAGATCCAGC+AGG 0.526498 7.4:-16888541 None:intergenic
GACATGTGTGAATATGCTCA+TGG 0.527602 7.4:+16888793 MS.gene04810:CDS
CGTAAGGGTGCTTGCCGGCG+CGG 0.530669 7.4:+16888769 MS.gene04810:CDS
CTATCTCTCCAATGGGCTCA+AGG 0.530752 7.4:+16889583 MS.gene04810:CDS
ATTGACATCCTTGAGCCCAT+TGG 0.533162 7.4:-16889591 None:intergenic
CGGGTCTCCTTCTCCACCAC+CGG 0.535005 7.4:+16888477 MS.gene04810:CDS
TGATCCTACATCGGTGGATG+AGG 0.535909 7.4:+16888024 MS.gene04810:CDS
GAAGCTGCTTCTTGCAGCAG+GGG 0.537195 7.4:+16888261 MS.gene04810:CDS
CCTACATCGGTGGATGAGGT+TGG 0.537476 7.4:+16888028 MS.gene04810:CDS
AAGACAGCTGATTTGTGAGT+CGG 0.538872 7.4:-16889420 None:intergenic
CCTAATTCCGTGGATGCTAA+CGG 0.540668 7.4:+16888289 MS.gene04810:CDS
CTAAGATTACAGCCAGCACT+AGG 0.544045 7.4:-16888397 None:intergenic
TCATTTGAGCTTGGGAACAA+TGG 0.545835 7.4:+16889795 MS.gene04810:CDS
CGTGGAACCTATCTCTCCAA+TGG 0.547113 7.4:+16889575 MS.gene04810:CDS
GGGCTCAAGGATGTCAATGC+TGG 0.547672 7.4:+16889596 MS.gene04810:CDS
GCCGAAGCTCTTCAGGAGTG+TGG 0.548910 7.4:-16888906 None:intergenic
TAGTTAAGTGATTCATGGTG+TGG 0.551522 7.4:-16887919 None:intergenic
AGACGGGTTCTATATTGTGC+AGG 0.553860 7.4:-16888838 None:intergenic
GATGAGGTTGGATTATGGTA+TGG 0.556471 7.4:+16888040 MS.gene04810:CDS
ATTCAATGGCTTCATTCGAC+CGG 0.556611 7.4:-16889313 None:intergenic
ACCATGAATCACTTAACTAT+CGG 0.558236 7.4:+16887923 MS.gene04810:CDS
CCCATGTCACCTTCTGGCAA+TGG 0.558647 7.4:+16889069 MS.gene04810:CDS
TGGGAATAAGCACGCGAACA+AGG 0.559628 7.4:-16888649 None:intergenic
ACATGTGTGAATATGCTCAT+GGG 0.562526 7.4:+16888794 MS.gene04810:CDS
TTCCAGGAAGATGCAAGGCT+GGG 0.563396 7.4:-16889131 None:intergenic
TAAGGGTGCTTGCCGGCGCG+GGG 0.564739 7.4:+16888771 MS.gene04810:CDS
TTGTACCGTCCTTGCAGAGA+CGG 0.564971 7.4:-16888855 None:intergenic
AGCCTAAGCTTCCGCGAGCA+CGG 0.565872 7.4:+16889648 MS.gene04810:CDS
AGCCGTGCTCGCGGAAGCTT+AGG 0.568886 7.4:-16889650 None:intergenic
GACATGACAGACATCGAAGA+AGG 0.569249 7.4:-16889027 None:intergenic
AGGGGAGAATGCCCGAAGAA+GGG 0.570703 7.4:+16888702 MS.gene04810:CDS
GAATAAACAATAACATCTAA+CGG 0.574687 7.4:-16888319 None:intergenic
CATGGCTGCAGCAAAATCCA+TGG 0.577281 7.4:-16888986 None:intergenic
CCCTTACGAAAATCAGGACA+AGG 0.579234 7.4:-16888754 None:intergenic
CTGCTAATAACGACGTGGAA+GGG 0.580572 7.4:+16887981 MS.gene04810:CDS
CAGATCCAGCAGGAGAAAGA+GGG 0.581890 7.4:-16888531 None:intergenic
ACGATCCCCGTTAGCATCCA+CGG 0.582142 7.4:-16888296 None:intergenic
GTATGTTTCAACTGGTTCTG+CGG 0.583036 7.4:+16888933 MS.gene04810:CDS
AGGGCATTCAGTCCAATCAT+GGG 0.584059 7.4:-16888668 None:intergenic
TGAGCCAGGCAACATGCTCA+TGG 0.584222 7.4:-16889004 None:intergenic
GACGTGCTTGACCGAGGTGA+GGG 0.585321 7.4:-16888958 None:intergenic
TTCAACAGGAGATCCGGTGG+TGG 0.585729 7.4:-16888490 None:intergenic
CCGAAGCTCTTCAGGAGTGT+GGG 0.587103 7.4:-16888905 None:intergenic
GCAACAACTCCTTAATGAGT+TGG 0.589263 7.4:+16889245 MS.gene04810:CDS
TCTCCCCTGGATGAACAAAA+GGG 0.590156 7.4:-16888687 None:intergenic
GAAGAGCAGTGCTCTTGTCA+AGG 0.590240 7.4:-16888195 None:intergenic
TTATGGTATGGTCGTCGCAA+GGG 0.590907 7.4:+16888052 MS.gene04810:CDS
GTTCTGCGGTTCCCTCACCT+CGG 0.594015 7.4:+16888947 MS.gene04810:CDS
CGAGGAGCCTGATTTATCAT+GGG 0.594503 7.4:+16889818 MS.gene04810:CDS
ATTATGGTATGGTCGTCGCA+AGG 0.597308 7.4:+16888051 MS.gene04810:CDS
GTGCTCTTGTCAAGGCCACA+AGG 0.598467 7.4:-16888187 None:intergenic
TATTAGCAGCAAGCTCAAGA+AGG 0.599518 7.4:-16887967 None:intergenic
ATCATGCTGTATTGGGAACA+TGG 0.599645 7.4:+16889967 MS.gene04810:CDS
AGACGTGCTTGACCGAGGTG+AGG 0.601319 7.4:-16888959 None:intergenic
GCTCAAATGAAGATGATCTA+CGG 0.601438 7.4:-16889782 None:intergenic
GACGGAGATGAAGACGGCAC+AGG 0.602727 7.4:-16887857 None:intergenic
GCTGCTAATAACGACGTGGA+AGG 0.603136 7.4:+16887980 MS.gene04810:CDS
TTCTCAGGTGAAGCCGACAA+AGG 0.603590 7.4:-16888454 None:intergenic
AAGAATGTCTCCACGAAACG+TGG 0.605224 7.4:+16889557 MS.gene04810:CDS
TCTAACAGTCTTAGCCGCTC+CGG 0.606773 7.4:+16889294 MS.gene04810:CDS
GCCATTGCCAGAAGGTGACA+TGG 0.611555 7.4:-16889070 None:intergenic
CTGTTAGAATTAATATGACG+TGG 0.612704 7.4:-16889279 None:intergenic
ATATAGAACCCGTCTCTGCA+AGG 0.614108 7.4:+16888846 MS.gene04810:CDS
ATTCACACATGTCCCCGCGC+CGG 0.614297 7.4:-16888783 None:intergenic
TGATCATCATTTATTGCAGG+CGG 0.614691 7.4:+16889509 MS.gene04810:CDS
TATGTAGCAGCAACCATCAA+CGG 0.614726 7.4:-16888106 None:intergenic
GTTGATATCAACAGGCCTTG+TGG 0.614945 7.4:+16888172 MS.gene04810:CDS
TGGAGTTAGAGCCGTGCTCG+CGG 0.616438 7.4:-16889659 None:intergenic
AGCAGATGGTCAATGAGCAA+AGG 0.617799 7.4:+16888080 MS.gene04810:CDS
ATATCGAGGAGAAGAACTCT+CGG 0.618533 7.4:-16889364 None:intergenic
AATAAGCACGCGAACAAGGT+CGG 0.619335 7.4:-16888645 None:intergenic
AAGGCTGGGATGTTTGGCTG+AGG 0.620227 7.4:-16889117 None:intergenic
TAATTCCGTGGATGCTAACG+GGG 0.620451 7.4:+16888291 MS.gene04810:CDS
GCTCACAATGCGGATGATGT+TGG 0.621854 7.4:+16889753 MS.gene04810:CDS
TCACTGTGCTGCTTCCGGTG+GGG 0.621976 7.4:+16888216 MS.gene04810:CDS
ATGGGTGGAGTGAATGGTGA+AGG 0.622440 7.4:-16889051 None:intergenic
GATGCAGCTTGATCATCTTG+TGG 0.622855 7.4:+16889998 MS.gene04810:CDS
CCAATCCAACTTACCATTGG+GGG 0.626687 7.4:-16889730 None:intergenic
TTGCCAGAAGGTGACATGGG+TGG 0.627061 7.4:-16889066 None:intergenic
TCAGGTGAAGCCGACAAAGG+AGG 0.632119 7.4:-16888451 None:intergenic
CCCAATCCAACTTACCATTG+GGG 0.638578 7.4:-16889731 None:intergenic
GATAGAGACGGAGATGAAGA+CGG 0.638842 7.4:-16887863 None:intergenic
TCGCAAGGGATCGAAGCAGA+TGG 0.641118 7.4:+16888066 MS.gene04810:CDS
AGAACCCGTCTCTGCAAGGA+CGG 0.642420 7.4:+16888850 MS.gene04810:CDS
TGAAAGGATGTGCTGTGAGT+CGG 0.642861 7.4:+16887823 None:intergenic
AACTTCAACAGGAGATCCGG+TGG 0.644927 7.4:-16888493 None:intergenic
GTCGAAGTTGGAGATAGAGA+CGG 0.650421 7.4:-16887875 None:intergenic
CATGTGTGAATATGCTCATG+GGG 0.652271 7.4:+16888795 MS.gene04810:CDS
GCAGAAGACGTGCTTGACCG+AGG 0.653400 7.4:-16888964 None:intergenic
TTTCACAAGTTCAAGCTTCG+GGG 0.656993 7.4:-16888341 None:intergenic
TGAGCTTGGGAACAATGGCG+AGG 0.658801 7.4:+16889800 MS.gene04810:CDS
TGTGAAATGCCATTGCCAGA+AGG 0.659354 7.4:-16889078 None:intergenic
ATTACTTCCAGGAAGATGCA+AGG 0.661108 7.4:-16889136 None:intergenic
AAGGATGTGCTGTGAGTCGG+AGG 0.661354 7.4:+16887826 None:intergenic
AGGGGCTGATCCTAATTCCG+TGG 0.663243 7.4:+16888279 MS.gene04810:CDS
ATGGCTTCATTCGACCGGAG+CGG 0.667016 7.4:-16889308 None:intergenic
CATATTCATTCCCTCACCCG+AGG 0.676171 7.4:-16889922 None:intergenic
GAACCAGTTGAAACATACAA+TGG 0.685763 7.4:-16888928 None:intergenic
TGAGTATGATCCTACATCGG+TGG 0.686854 7.4:+16888018 MS.gene04810:CDS
AGATTTGGATCAGCATATCG+AGG 0.694701 7.4:-16889378 None:intergenic
GTTGGATTGGGCTCACAATG+CGG 0.696691 7.4:+16889743 MS.gene04810:CDS
GATTGAGTATGATCCTACAT+CGG 0.700321 7.4:+16888015 MS.gene04810:CDS
CCATTGCCAGAAGGTGACAT+GGG 0.719317 7.4:-16889069 None:intergenic
CCTTACGAAAATCAGGACAA+GGG 0.730105 7.4:-16888753 None:intergenic
GCTTGCTGCTAATAACGACG+TGG 0.738667 7.4:+16887976 MS.gene04810:CDS
AGGATGTGCTGTGAGTCGGA+GGG 0.739091 7.4:+16887827 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAATAAACAATAACATCTAA+CGG - chr7.4:16888322-16888341 None:intergenic 20.0%
!!! GAAAGTGATTATTTCTTTAT+CGG + chr7.4:16888147-16888166 MS.gene04810:CDS 20.0%
! CAATAATTCTTGGTCAAAAT+GGG + chr7.4:16889704-16889723 MS.gene04810:CDS 25.0%
! GAAGAAAAATTTGTATTCAC+TGG - chr7.4:16889480-16889499 None:intergenic 25.0%
! TCAATAATTCTTGGTCAAAA+TGG + chr7.4:16889703-16889722 MS.gene04810:CDS 25.0%
AAAACAGTTGAAGTCAGATT+TGG - chr7.4:16889396-16889415 None:intergenic 30.0%
AACTGAGATCAAAGAGAAAT+TGG + chr7.4:16889866-16889885 MS.gene04810:CDS 30.0%
AAGAGATCATCAAGATTTGA+TGG - chr7.4:16889339-16889358 None:intergenic 30.0%
AATGAATATGAGCACACAAA+TGG + chr7.4:16889935-16889954 MS.gene04810:CDS 30.0%
AATTTCTCTTTGATCTCAGT+TGG - chr7.4:16889867-16889886 None:intergenic 30.0%
ACCATGAATCACTTAACTAT+CGG + chr7.4:16887923-16887942 MS.gene04810:CDS 30.0%
ATTCCGAATGTATTCTTTCA+AGG + chr7.4:16888621-16888640 MS.gene04810:CDS 30.0%
CAATGCTAGAGATATTCATA+TGG + chr7.4:16889188-16889207 MS.gene04810:CDS 30.0%
CTGTTAGAATTAATATGACG+TGG - chr7.4:16889282-16889301 None:intergenic 30.0%
TGTTGATCATCATTTATTGC+AGG + chr7.4:16889506-16889525 MS.gene04810:CDS 30.0%
! TTGTTGCTGTTGATCATAAT+CGG - chr7.4:16889232-16889251 None:intergenic 30.0%
! TTTTTCACAAGTTCAAGCTT+CGG - chr7.4:16888346-16888365 None:intergenic 30.0%
!! TCAAGATTTGATGGATTCAA+TGG - chr7.4:16889330-16889349 None:intergenic 30.0%
!!! TATATGCTGTTTTTGATGTC+AGG - chr7.4:16888589-16888608 None:intergenic 30.0%
AATTAATATGACGTGGAGAC+AGG - chr7.4:16889275-16889294 None:intergenic 35.0%
ACATGTGTGAATATGCTCAT+GGG + chr7.4:16888794-16888813 MS.gene04810:CDS 35.0%
ACCGATAGTTAAGTGATTCA+TGG - chr7.4:16887927-16887946 None:intergenic 35.0%
ACTTGTGAAAAACAGTCTTG+AGG + chr7.4:16888354-16888373 MS.gene04810:CDS 35.0%
AGATCATCTTCATTTGAGCT+TGG + chr7.4:16889786-16889805 MS.gene04810:CDS 35.0%
GAACCAGTTGAAACATACAA+TGG - chr7.4:16888931-16888950 None:intergenic 35.0%
GATCATCTTCATTTGAGCTT+GGG + chr7.4:16889787-16889806 MS.gene04810:CDS 35.0%
GATTGAGTATGATCCTACAT+CGG + chr7.4:16888015-16888034 MS.gene04810:CDS 35.0%
GCTCAAATGAAGATGATCTA+CGG - chr7.4:16889785-16889804 None:intergenic 35.0%
GGACCTTGAAAGAATACATT+CGG - chr7.4:16888627-16888646 None:intergenic 35.0%
TAGTTAAGTGATTCATGGTG+TGG - chr7.4:16887922-16887941 None:intergenic 35.0%
TATCGGATGTTGATATCAAC+AGG + chr7.4:16888164-16888183 MS.gene04810:CDS 35.0%
TCTGTTGATCATGCTGTATT+GGG + chr7.4:16889960-16889979 MS.gene04810:CDS 35.0%
TGATCATCATTTATTGCAGG+CGG + chr7.4:16889509-16889528 MS.gene04810:CDS 35.0%
TTCTTATTCTCCTCCTTTGT+CGG + chr7.4:16888441-16888460 MS.gene04810:CDS 35.0%
! CAATTGACTTCAACTTCAAC+AGG - chr7.4:16888507-16888526 None:intergenic 35.0%
! TTTTCACAAGTTCAAGCTTC+GGG - chr7.4:16888345-16888364 None:intergenic 35.0%
AAATTGGCAACTTCCATCTC+AGG + chr7.4:16889882-16889901 MS.gene04810:CDS 40.0%
AGATTTGGATCAGCATATCG+AGG - chr7.4:16889381-16889400 None:intergenic 40.0%
AGCTGTAGTGATACTTTCTC+GGG - chr7.4:16888729-16888748 None:intergenic 40.0%
ATATCGAGGAGAAGAACTCT+CGG - chr7.4:16889367-16889386 None:intergenic 40.0%
ATCATGCTGTATTGGGAACA+TGG + chr7.4:16889967-16889986 MS.gene04810:CDS 40.0%
ATTACTTCCAGGAAGATGCA+AGG - chr7.4:16889139-16889158 None:intergenic 40.0%
ATTCAATGGCTTCATTCGAC+CGG - chr7.4:16889316-16889335 None:intergenic 40.0%
CAGCTGTAGTGATACTTTCT+CGG - chr7.4:16888730-16888749 None:intergenic 40.0%
CATGTGTGAATATGCTCATG+GGG + chr7.4:16888795-16888814 MS.gene04810:CDS 40.0%
CCTTACGAAAATCAGGACAA+GGG - chr7.4:16888756-16888775 None:intergenic 40.0%
CTAGACTGAAGATTACTTCC+AGG - chr7.4:16889150-16889169 None:intergenic 40.0%
CTGGCTCAGTCAATAATTCT+TGG + chr7.4:16889694-16889713 MS.gene04810:CDS 40.0%
GACATGTGTGAATATGCTCA+TGG + chr7.4:16888793-16888812 MS.gene04810:CDS 40.0%
GAGGAGCTACTTCAAATTGA+TGG + chr7.4:16888373-16888392 MS.gene04810:CDS 40.0%
GATGAGGTTGGATTATGGTA+TGG + chr7.4:16888040-16888059 MS.gene04810:CDS 40.0%
GCAACAACTCCTTAATGAGT+TGG + chr7.4:16889245-16889264 MS.gene04810:CDS 40.0%
GTCTGTTGATCATGCTGTAT+TGG + chr7.4:16889959-16889978 MS.gene04810:CDS 40.0%
TATGTAGCAGCAACCATCAA+CGG - chr7.4:16888109-16888128 None:intergenic 40.0%
TATTAGCAGCAAGCTCAAGA+AGG - chr7.4:16887970-16887989 None:intergenic 40.0%
TCATTTGAGCTTGGGAACAA+TGG + chr7.4:16889795-16889814 MS.gene04810:CDS 40.0%
TGAGAATTGTGTGTCGAAGT+TGG - chr7.4:16887890-16887909 None:intergenic 40.0%
TGATTCATGGTGTGGTTTCT+CGG - chr7.4:16887914-16887933 None:intergenic 40.0%
TTCAACTTCAACAGGAGATC+CGG - chr7.4:16888499-16888518 None:intergenic 40.0%
TTTCACAAGTTCAAGCTTCG+GGG - chr7.4:16888344-16888363 None:intergenic 40.0%
TTTCACACAACTCTGTTGCT+TGG + chr7.4:16889094-16889113 MS.gene04810:CDS 40.0%
! AATGCCCTTTTGTTCATCCA+GGG + chr7.4:16888683-16888702 MS.gene04810:CDS 40.0%
! CCTTGTCCTGATTTTCGTAA+GGG + chr7.4:16888754-16888773 MS.gene04810:CDS 40.0%
! TTGATGGTTGCTGCTACATA+TGG + chr7.4:16888109-16888128 MS.gene04810:CDS 40.0%
! TTTTTGATGTCAGGAAGGGA+TGG - chr7.4:16888580-16888599 None:intergenic 40.0%
!! AAGACAGCTGATTTGTGAGT+CGG - chr7.4:16889423-16889442 None:intergenic 40.0%
!! GTATGTTTCAACTGGTTCTG+CGG + chr7.4:16888933-16888952 MS.gene04810:CDS 40.0%
!! TAGTGCTGGCTGTAATCTTA+GGG + chr7.4:16888399-16888418 MS.gene04810:CDS 40.0%
!!! GCTGTTTTTGATGTCAGGAA+GGG - chr7.4:16888584-16888603 None:intergenic 40.0%
!!! TGCTGTTTTTGATGTCAGGA+AGG - chr7.4:16888585-16888604 None:intergenic 40.0%
AAGAATGTCTCCACGAAACG+TGG + chr7.4:16889557-16889576 MS.gene04810:CDS 45.0%
AATAAGCACGCGAACAAGGT+CGG - chr7.4:16888648-16888667 None:intergenic 45.0%
ACAGGCATGCCAACTCATTA+AGG - chr7.4:16889257-16889276 None:intergenic 45.0%
AGCAGATGGTCAATGAGCAA+AGG + chr7.4:16888080-16888099 MS.gene04810:CDS 45.0%
AGCCCAATCCAACTTACCAT+TGG - chr7.4:16889736-16889755 None:intergenic 45.0%
AGGACGGTACAAATTGTTCC+AGG + chr7.4:16888866-16888885 MS.gene04810:CDS 45.0%
ATATAGAACCCGTCTCTGCA+AGG + chr7.4:16888846-16888865 MS.gene04810:CDS 45.0%
ATTATGGTATGGTCGTCGCA+AGG + chr7.4:16888051-16888070 MS.gene04810:CDS 45.0%
ATTGACATCCTTGAGCCCAT+TGG - chr7.4:16889594-16889613 None:intergenic 45.0%
CAAGCACCCTTACGAAAATC+AGG - chr7.4:16888763-16888782 None:intergenic 45.0%
CCAATCCAACTTACCATTGG+GGG - chr7.4:16889733-16889752 None:intergenic 45.0%
CCCAATCCAACTTACCATTG+GGG - chr7.4:16889734-16889753 None:intergenic 45.0%
CCCTTACGAAAATCAGGACA+AGG - chr7.4:16888757-16888776 None:intergenic 45.0%
CCTAATTCCGTGGATGCTAA+CGG + chr7.4:16888289-16888308 MS.gene04810:CDS 45.0%
CGAGGAGCCTGATTTATCAT+GGG + chr7.4:16889818-16889837 MS.gene04810:CDS 45.0%
CGGCCATTGTATGTTTCAAC+TGG + chr7.4:16888925-16888944 MS.gene04810:CDS 45.0%
CTAAGATTACAGCCAGCACT+AGG - chr7.4:16888400-16888419 None:intergenic 45.0%
CTAATTCCGTGGATGCTAAC+GGG + chr7.4:16888290-16888309 MS.gene04810:CDS 45.0%
CTGCTAATAACGACGTGGAA+GGG + chr7.4:16887981-16888000 MS.gene04810:CDS 45.0%
GACATGACAGACATCGAAGA+AGG - chr7.4:16889030-16889049 None:intergenic 45.0%
GACTGCACCCATGATAAATC+AGG - chr7.4:16889828-16889847 None:intergenic 45.0%
GATAGAGACGGAGATGAAGA+CGG - chr7.4:16887866-16887885 None:intergenic 45.0%
GATGCAGCTTGATCATCTTG+TGG + chr7.4:16889998-16890017 MS.gene04810:CDS 45.0%
GCCCAATCCAACTTACCATT+GGG - chr7.4:16889735-16889754 None:intergenic 45.0%
GTCGAAGTTGGAGATAGAGA+CGG - chr7.4:16887878-16887897 None:intergenic 45.0%
GTGGAACCTATCTCTCCAAT+GGG + chr7.4:16889576-16889595 MS.gene04810:CDS 45.0%
GTTGATATCAACAGGCCTTG+TGG + chr7.4:16888172-16888191 MS.gene04810:CDS 45.0%
TAATTCCGTGGATGCTAACG+GGG + chr7.4:16888291-16888310 MS.gene04810:CDS 45.0%
TCAAAATGGGAATCCCCCAA+TGG + chr7.4:16889717-16889736 MS.gene04810:CDS 45.0%
TCTCCCCTGGATGAACAAAA+GGG - chr7.4:16888690-16888709 None:intergenic 45.0%
TCTTATGGTGTTCAGCCATC+AGG + chr7.4:16889534-16889553 MS.gene04810:CDS 45.0%
TCTTTCTTCTCAGATCCAGC+AGG - chr7.4:16888544-16888563 None:intergenic 45.0%
TGAGTATGATCCTACATCGG+TGG + chr7.4:16888018-16888037 MS.gene04810:CDS 45.0%
TGTGAAATGCCATTGCCAGA+AGG - chr7.4:16889081-16889100 None:intergenic 45.0%
TTATGGTATGGTCGTCGCAA+GGG + chr7.4:16888052-16888071 MS.gene04810:CDS 45.0%
TTATTGCAGGCGGCTTCTTA+TGG + chr7.4:16889519-16889538 MS.gene04810:CDS 45.0%
TTCTCCCCTGGATGAACAAA+AGG - chr7.4:16888691-16888710 None:intergenic 45.0%
! AGACGGGTTCTATATTGTGC+AGG - chr7.4:16888841-16888860 None:intergenic 45.0%
! AGGGCATTCAGTCCAATCAT+GGG - chr7.4:16888671-16888690 None:intergenic 45.0%
! ATGCCCTTTTGTTCATCCAG+GGG + chr7.4:16888684-16888703 MS.gene04810:CDS 45.0%
! CAAATTGATGGTCCTAGTGC+TGG + chr7.4:16888385-16888404 MS.gene04810:CDS 45.0%
! CCCCAATGGTAAGTTGGATT+GGG + chr7.4:16889731-16889750 MS.gene04810:CDS 45.0%
! CCCTTGTCCTGATTTTCGTA+AGG + chr7.4:16888753-16888772 MS.gene04810:CDS 45.0%
! GAATGCCCTTTTGTTCATCC+AGG + chr7.4:16888682-16888701 MS.gene04810:CDS 45.0%
!! AAGGGCATTCAGTCCAATCA+TGG - chr7.4:16888672-16888691 None:intergenic 45.0%
!! CTAGTGCTGGCTGTAATCTT+AGG + chr7.4:16888398-16888417 MS.gene04810:CDS 45.0%
!!! ATTTTCGTAAGGGTGCTTGC+CGG + chr7.4:16888764-16888783 MS.gene04810:CDS 45.0%
AACTTCAACAGGAGATCCGG+TGG - chr7.4:16888496-16888515 None:intergenic 50.0%
ACTTTCTCGGGTCCCTTCTT+CGG - chr7.4:16888717-16888736 None:intergenic 50.0%
AGATGCAAGGCTGGGATGTT+TGG - chr7.4:16889126-16889145 None:intergenic 50.0%
ATGGGTGGAGTGAATGGTGA+AGG - chr7.4:16889054-16889073 None:intergenic 50.0%
CAGATCCAGCAGGAGAAAGA+GGG - chr7.4:16888534-16888553 None:intergenic 50.0%
CATATTCATTCCCTCACCCG+AGG - chr7.4:16889925-16889944 None:intergenic 50.0%
CATGGCTGCAGCAAAATCCA+TGG - chr7.4:16888989-16889008 None:intergenic 50.0%
CCATTGCCAGAAGGTGACAT+GGG - chr7.4:16889072-16889091 None:intergenic 50.0%
CCGTTAGCATCCACGGAATT+AGG - chr7.4:16888292-16888311 None:intergenic 50.0%
CGCGTGCTTATTCCCATGAT+TGG + chr7.4:16888656-16888675 MS.gene04810:CDS 50.0%
CGGTGGATGAGGTTGGATTA+TGG + chr7.4:16888035-16888054 MS.gene04810:CDS 50.0%
CGTGGAACCTATCTCTCCAA+TGG + chr7.4:16889575-16889594 MS.gene04810:CDS 50.0%
CGTGGAGACATTCTTCCTGA+TGG - chr7.4:16889552-16889571 None:intergenic 50.0%
CTTGAGCCCATTGGAGAGAT+AGG - chr7.4:16889585-16889604 None:intergenic 50.0%
GAAGAGCAGTGCTCTTGTCA+AGG - chr7.4:16888198-16888217 None:intergenic 50.0%
GAGATAGGTTCCACGTTTCG+TGG - chr7.4:16889570-16889589 None:intergenic 50.0%
GCGAGGAGCCTGATTTATCA+TGG + chr7.4:16889817-16889836 MS.gene04810:CDS 50.0%
GCTCACAATGCGGATGATGT+TGG + chr7.4:16889753-16889772 MS.gene04810:CDS 50.0%
GCTGCTAATAACGACGTGGA+AGG + chr7.4:16887980-16887999 MS.gene04810:CDS 50.0%
GGAATCCCCCAATGGTAAGT+TGG + chr7.4:16889725-16889744 MS.gene04810:CDS 50.0%
GGCAAAGAAGCAAACTCTCC+TGG - chr7.4:16888887-16888906 None:intergenic 50.0%
TACAATGGCCGAAGCTCTTC+AGG - chr7.4:16888916-16888935 None:intergenic 50.0%
TCAGATCCAGCAGGAGAAAG+AGG - chr7.4:16888535-16888554 None:intergenic 50.0%
TCAGGAAGGGATGGATCAAC+AGG - chr7.4:16888571-16888590 None:intergenic 50.0%
TCTAACAGTCTTAGCCGCTC+CGG + chr7.4:16889294-16889313 MS.gene04810:CDS 50.0%
TGAAGCTGCTTCTTGCAGCA+GGG + chr7.4:16888260-16888279 MS.gene04810:CDS 50.0%
TGATCCTACATCGGTGGATG+AGG + chr7.4:16888024-16888043 MS.gene04810:CDS 50.0%
TGGGAATAAGCACGCGAACA+AGG - chr7.4:16888652-16888671 None:intergenic 50.0%
TTCCAGGAAGATGCAAGGCT+GGG - chr7.4:16889134-16889153 None:intergenic 50.0%
TTCTCAGGTGAAGCCGACAA+AGG - chr7.4:16888457-16888476 None:intergenic 50.0%
TTGTACCGTCCTTGCAGAGA+CGG - chr7.4:16888858-16888877 None:intergenic 50.0%
! AACAGCATTTTCAGCCCCAC+CGG - chr7.4:16888233-16888252 None:intergenic 50.0%
! CCCCCAATGGTAAGTTGGAT+TGG + chr7.4:16889730-16889749 MS.gene04810:CDS 50.0%
! CTATCTCTCCAATGGGCTCA+AGG + chr7.4:16889583-16889602 MS.gene04810:CDS 50.0%
! GCTTGCTGCTAATAACGACG+TGG + chr7.4:16887976-16887995 MS.gene04810:CDS 50.0%
! GTTGGATTGGGCTCACAATG+CGG + chr7.4:16889743-16889762 MS.gene04810:CDS 50.0%
!! TTGTCGGCTTCACCTGAGAA+CGG + chr7.4:16888457-16888476 MS.gene04810:CDS 50.0%
AACTCCATGCTTGCAGCTGC+TGG + chr7.4:16889675-16889694 MS.gene04810:CDS 55.0%
AAGGCTGGGATGTTTGGCTG+AGG - chr7.4:16889120-16889139 None:intergenic 55.0%
ACGATCCCCGTTAGCATCCA+CGG - chr7.4:16888299-16888318 None:intergenic 55.0%
ACTCCACCCATGTCACCTTC+TGG + chr7.4:16889063-16889082 MS.gene04810:CDS 55.0%
AGAACCCGTCTCTGCAAGGA+CGG + chr7.4:16888850-16888869 MS.gene04810:CDS 55.0%
AGGGGAGAATGCCCGAAGAA+GGG + chr7.4:16888702-16888721 MS.gene04810:CDS 55.0%
AGGGGCTGATCCTAATTCCG+TGG + chr7.4:16888279-16888298 MS.gene04810:CDS 55.0%
ATCCCAGCCTTGCATCTTCC+TGG + chr7.4:16889129-16889148 MS.gene04810:CDS 55.0%
ATGGCTTCATTCGACCGGAG+CGG - chr7.4:16889311-16889330 None:intergenic 55.0%
CCAACCTCATCCACCGATGT+AGG - chr7.4:16888031-16888050 None:intergenic 55.0%
CCCACACTCCTGAAGAGCTT+CGG + chr7.4:16888905-16888924 MS.gene04810:CDS 55.0%
CCCATGTCACCTTCTGGCAA+TGG + chr7.4:16889069-16889088 MS.gene04810:CDS 55.0%
CCTACATCGGTGGATGAGGT+TGG + chr7.4:16888028-16888047 MS.gene04810:CDS 55.0%
CTTCCAGGAAGATGCAAGGC+TGG - chr7.4:16889135-16889154 None:intergenic 55.0%
CTTTCTCGGGTCCCTTCTTC+GGG - chr7.4:16888716-16888735 None:intergenic 55.0%
GAACTCCCTCTTTCTCCTGC+TGG + chr7.4:16888526-16888545 MS.gene04810:CDS 55.0%
GAAGCTGCTTCTTGCAGCAG+GGG + chr7.4:16888261-16888280 MS.gene04810:CDS 55.0%
GACATCGAAGAAGGTGAGCC+AGG - chr7.4:16889021-16889040 None:intergenic 55.0%
GCCATTGCCAGAAGGTGACA+TGG - chr7.4:16889073-16889092 None:intergenic 55.0%
GGGCTCAAGGATGTCAATGC+TGG + chr7.4:16889596-16889615 MS.gene04810:CDS 55.0%
GGTGACATGGGTGGAGTGAA+TGG - chr7.4:16889060-16889079 None:intergenic 55.0%
GTCAAGCACGTCTTCTGCCA+TGG + chr7.4:16888969-16888988 MS.gene04810:CDS 55.0%
GTGAAGCTGCTTCTTGCAGC+AGG + chr7.4:16888259-16888278 MS.gene04810:CDS 55.0%
GTGCTCTTGTCAAGGCCACA+AGG - chr7.4:16888190-16888209 None:intergenic 55.0%
TCAGGTGAAGCCGACAAAGG+AGG - chr7.4:16888454-16888473 None:intergenic 55.0%
TCGCAAGGGATCGAAGCAGA+TGG + chr7.4:16888066-16888085 MS.gene04810:CDS 55.0%
TGAGCAAAGGACGCCGTTGA+TGG + chr7.4:16888093-16888112 MS.gene04810:CDS 55.0%
TGAGCCAGGCAACATGCTCA+TGG - chr7.4:16889007-16889026 None:intergenic 55.0%
TGAGCTTGGGAACAATGGCG+AGG + chr7.4:16889800-16889819 MS.gene04810:CDS 55.0%
TGTACCGTCCTTGCAGAGAC+GGG - chr7.4:16888857-16888876 None:intergenic 55.0%
TTCAACAGGAGATCCGGTGG+TGG - chr7.4:16888493-16888512 None:intergenic 55.0%
TTGCCAGAAGGTGACATGGG+TGG - chr7.4:16889069-16889088 None:intergenic 55.0%
! CCGAAGCTCTTCAGGAGTGT+GGG - chr7.4:16888908-16888927 None:intergenic 55.0%
!! GCTCTTCACTGTGCTGCTTC+CGG + chr7.4:16888211-16888230 MS.gene04810:CDS 55.0%
!! TGTCGGCTTCACCTGAGAAC+GGG + chr7.4:16888458-16888477 MS.gene04810:CDS 55.0%
!! TTCACTGTGCTGCTTCCGGT+GGG + chr7.4:16888215-16888234 MS.gene04810:CDS 55.0%
!!! CTCATGGGGTTTTCGAGTGC+TGG + chr7.4:16888809-16888828 MS.gene04810:CDS 55.0%
AGACGTGCTTGACCGAGGTG+AGG - chr7.4:16888962-16888981 None:intergenic 60.0%
AGCCTAAGCTTCCGCGAGCA+CGG + chr7.4:16889648-16889667 MS.gene04810:CDS 60.0%
ATTCACACATGTCCCCGCGC+CGG - chr7.4:16888786-16888805 None:intergenic 60.0%
CAGGGGAGAATGCCCGAAGA+AGG + chr7.4:16888701-16888720 MS.gene04810:CDS 60.0%
CTTCTTCGGGCATTCTCCCC+TGG - chr7.4:16888703-16888722 None:intergenic 60.0%
GACGGAGATGAAGACGGCAC+AGG - chr7.4:16887860-16887879 None:intergenic 60.0%
GACGTGCTTGACCGAGGTGA+GGG - chr7.4:16888961-16888980 None:intergenic 60.0%
GCAGAAGACGTGCTTGACCG+AGG - chr7.4:16888967-16888986 None:intergenic 60.0%
GCAGCCATGAGCATGTTGCC+TGG + chr7.4:16889000-16889019 MS.gene04810:CDS 60.0%
GCCGAAGCTCTTCAGGAGTG+TGG - chr7.4:16888909-16888928 None:intergenic 60.0%
GGAGAAGGAGACCCGTTCTC+AGG - chr7.4:16888472-16888491 None:intergenic 60.0%
GTTCTGCGGTTCCCTCACCT+CGG + chr7.4:16888947-16888966 MS.gene04810:CDS 60.0%
TGAGCCAGCAGCTGCAAGCA+TGG - chr7.4:16889682-16889701 None:intergenic 60.0%
TGGAGTTAGAGCCGTGCTCG+CGG - chr7.4:16889662-16889681 None:intergenic 60.0%
!! AGGAGATCCGGTGGTGGAGA+AGG - chr7.4:16888487-16888506 None:intergenic 60.0%
!! CTTCACTGTGCTGCTTCCGG+TGG + chr7.4:16888214-16888233 MS.gene04810:CDS 60.0%
!! TCACTGTGCTGCTTCCGGTG+GGG + chr7.4:16888216-16888235 MS.gene04810:CDS 60.0%
AGCCGTGCTCGCGGAAGCTT+AGG - chr7.4:16889653-16889672 None:intergenic 65.0%
AGCTGGCGCAGCACCTGAGA+TGG - chr7.4:16889898-16889917 None:intergenic 65.0%
CGGGTCTCCTTCTCCACCAC+CGG + chr7.4:16888477-16888496 MS.gene04810:CDS 65.0%
! ATCTCAGGTGCTGCGCCAGC+TGG + chr7.4:16889897-16889916 MS.gene04810:CDS 65.0%
! CCAGCTGGTTCCTCGGGTGA+GGG + chr7.4:16889912-16889931 MS.gene04810:CDS 65.0%
! TGCTGCGCCAGCTGGTTCCT+CGG + chr7.4:16889905-16889924 MS.gene04810:CDS 65.0%
CCCTCACCCGAGGAACCAGC+TGG - chr7.4:16889915-16889934 None:intergenic 70.0%
! GCCAGCTGGTTCCTCGGGTG+AGG + chr7.4:16889911-16889930 MS.gene04810:CDS 70.0%
! GCTGCGCCAGCTGGTTCCTC+GGG + chr7.4:16889906-16889925 MS.gene04810:CDS 70.0%
!! CGTAAGGGTGCTTGCCGGCG+CGG + chr7.4:16888769-16888788 MS.gene04810:CDS 70.0%
!! GTAAGGGTGCTTGCCGGCGC+GGG + chr7.4:16888770-16888789 MS.gene04810:CDS 70.0%
!! TAAGGGTGCTTGCCGGCGCG+GGG + chr7.4:16888771-16888790 MS.gene04810:CDS 70.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 16887830 16890034 16887830 ID=MS.gene04810
chr7.4 mRNA 16887830 16890034 16887830 ID=MS.gene04810.t1;Parent=MS.gene04810
chr7.4 exon 16887830 16890034 16887830 ID=MS.gene04810.t1.exon1;Parent=MS.gene04810.t1
chr7.4 CDS 16887830 16890034 16887830 ID=cds.MS.gene04810.t1;Parent=MS.gene04810.t1
Gene Sequence

>MS.gene04810

ATGTGCTGTGAGTCGGAGGGTTTAAAGCCTGTGCCGTCTTCATCTCCGTCTCTATCTCCAACTTCGACACACAATTCTCAACCGAGAAACCACACCATGAATCACTTAACTATCGGTACTGAAGATTCTTTTGCTAGCCTTCTTGAGCTTGCTGCTAATAACGACGTGGAAGGGTTCAAACGATTGATTGAGTATGATCCTACATCGGTGGATGAGGTTGGATTATGGTATGGTCGTCGCAAGGGATCGAAGCAGATGGTCAATGAGCAAAGGACGCCGTTGATGGTTGCTGCTACATATGGTAGCATTGATGTTATGAAAGTGATTATTTCTTTATCGGATGTTGATATCAACAGGCCTTGTGGCCTTGACAAGAGCACTGCTCTTCACTGTGCTGCTTCCGGTGGGGCTGAAAATGCTGTTGATGCTGTGAAGCTGCTTCTTGCAGCAGGGGCTGATCCTAATTCCGTGGATGCTAACGGGGATCGTCCGTTAGATGTTATTGTTTATTCCCCGAAGCTTGAACTTGTGAAAAACAGTCTTGAGGAGCTACTTCAAATTGATGGTCCTAGTGCTGGCTGTAATCTTAGGGTGATTACAAACTCGCTTAATTCTTATTCTCCTCCTTTGTCGGCTTCACCTGAGAACGGGTCTCCTTCTCCACCACCGGATCTCCTGTTGAAGTTGAAGTCAATTGAACTCCCTCTTTCTCCTGCTGGATCTGAGAAGAAAGAATATCCTGTTGATCCATCCCTTCCTGACATCAAAAACAGCATATACTCAACTGATGAATTCCGAATGTATTCTTTCAAGGTCCGACCTTGTTCGCGTGCTTATTCCCATGATTGGACTGAATGCCCTTTTGTTCATCCAGGGGAGAATGCCCGAAGAAGGGACCCGAGAAAGTATCACTACAGCTGTGTCCCTTGTCCTGATTTTCGTAAGGGTGCTTGCCGGCGCGGGGACATGTGTGAATATGCTCATGGGGTTTTCGAGTGCTGGCTGCATCCTGCACAATATAGAACCCGTCTCTGCAAGGACGGTACAAATTGTTCCAGGAGAGTTTGCTTCTTTGCCCACACTCCTGAAGAGCTTCGGCCATTGTATGTTTCAACTGGTTCTGCGGTTCCCTCACCTCGGTCAAGCACGTCTTCTGCCATGGATTTTGCTGCAGCCATGAGCATGTTGCCTGGCTCACCTTCTTCGATGTCTGTCATGTCTCCTTCACCATTCACTCCACCCATGTCACCTTCTGGCAATGGCATTTCACACAACTCTGTTGCTTGGCCTCAGCCAAACATCCCAGCCTTGCATCTTCCTGGAAGTAATCTTCAGTCTAGTCGTTTGAGATCTTCTCTCAATGCTAGAGATATTCATATGGATGATTTTGAGTTGTTATCCGATTATGATCAACAGCAACAACTCCTTAATGAGTTGGCATGCCTGTCTCCACGTCATATTAATTCTAACAGTCTTAGCCGCTCCGGTCGAATGAAGCCATTGAATCCATCAAATCTTGATGATCTCTTTTCTGCCGAGAGTTCTTCTCCTCGATATGCTGATCCAAATCTGACTTCAACTGTTTTTTCTCCGACTCACAAATCAGCTGTCTTTAATCAGTTTCAGCAGCAGCAGAACATGTTGTCACCAGTGAATACAAATTTTTCTTCTAAAAATGTTGATCATCATTTATTGCAGGCGGCTTCTTATGGTGTTCAGCCATCAGGAAGAATGTCTCCACGAAACGTGGAACCTATCTCTCCAATGGGCTCAAGGATGTCAATGCTGGCACAACGCGACAAGCAGCAACAATTTCGTAGCCTAAGCTTCCGCGAGCACGGCTCTAACTCCATGCTTGCAGCTGCTGGCTCAGTCAATAATTCTTGGTCAAAATGGGAATCCCCCAATGGTAAGTTGGATTGGGCTCACAATGCGGATGATGTTGGTAAACTCCGTAGATCATCTTCATTTGAGCTTGGGAACAATGGCGAGGAGCCTGATTTATCATGGGTGCAGTCACTTGTCAAAGAATCTCCAACTGAGATCAAAGAGAAATTGGCAACTTCCATCTCAGGTGCTGCGCCAGCTGGTTCCTCGGGTGAGGGAATGAATATGAGCACACAAATGGAGTCTGTTGATCATGCTGTATTGGGAACATGGCTTGAACAGATGCAGCTTGATCATCTTGTGGCTCAGCAAAACTGA
Protein sequence

>MS.gene04810.t1

MCCESEGLKPVPSSSPSLSPTSTHNSQPRNHTMNHLTIGTEDSFASLLELAANNDVEGFKRLIEYDPTSVDEVGLWYGRRKGSKQMVNEQRTPLMVAATYGSIDVMKVIISLSDVDINRPCGLDKSTALHCAASGGAENAVDAVKLLLAAGADPNSVDANGDRPLDVIVYSPKLELVKNSLEELLQIDGPSAGCNLRVITNSLNSYSPPLSASPENGSPSPPPDLLLKLKSIELPLSPAGSEKKEYPVDPSLPDIKNSIYSTDEFRMYSFKVRPCSRAYSHDWTECPFVHPGENARRRDPRKYHYSCVPCPDFRKGACRRGDMCEYAHGVFECWLHPAQYRTRLCKDGTNCSRRVCFFAHTPEELRPLYVSTGSAVPSPRSSTSSAMDFAAAMSMLPGSPSSMSVMSPSPFTPPMSPSGNGISHNSVAWPQPNIPALHLPGSNLQSSRLRSSLNARDIHMDDFELLSDYDQQQQLLNELACLSPRHINSNSLSRSGRMKPLNPSNLDDLFSAESSSPRYADPNLTSTVFSPTHKSAVFNQFQQQQNMLSPVNTNFSSKNVDHHLLQAASYGVQPSGRMSPRNVEPISPMGSRMSMLAQRDKQQQFRSLSFREHGSNSMLAAAGSVNNSWSKWESPNGKLDWAHNADDVGKLRRSSSFELGNNGEEPDLSWVQSLVKESPTEIKEKLATSISGAAPAGSSGEGMNMSTQMESVDHAVLGTWLEQMQLDHLVAQQN