Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene048191.t1 | XP_024632961.1 | 84.7 | 793 | 93 | 4 | 1 | 765 | 1 | 793 | 0.00E+00 | 1343.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene048191.t1 | Q9SZL8 | 26.9 | 636 | 395 | 11 | 32 | 665 | 70 | 637 | 2.1e-63 | 245.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene048191.t1 | D3YBB9 | 77.0 | 774 | 158 | 4 | 1 | 764 | 49 | 812 | 0.0e+00 | 1192.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene048191.t1 | TF | FAR1 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene048191.t1 | MTR_0558s0020 | 87.162 | 296 | 37 | 1 | 1 | 295 | 1 | 296 | 0.0 | 548 |
MS.gene048191.t1 | MTR_1g083640 | 82.746 | 284 | 33 | 1 | 1 | 268 | 1 | 284 | 2.52e-172 | 496 |
MS.gene048191.t1 | MTR_8g446020 | 73.559 | 295 | 39 | 1 | 1 | 295 | 1 | 256 | 1.89e-152 | 444 |
MS.gene048191.t1 | MTR_6g090505 | 83.544 | 237 | 39 | 0 | 65 | 301 | 1 | 237 | 1.65e-142 | 423 |
MS.gene048191.t1 | MTR_6g090505 | 67.647 | 102 | 6 | 2 | 396 | 495 | 230 | 306 | 3.65e-34 | 134 |
MS.gene048191.t1 | MTR_6g090505 | 77.551 | 49 | 11 | 0 | 567 | 615 | 314 | 362 | 9.74e-12 | 67.8 |
MS.gene048191.t1 | MTR_2g014100 | 81.633 | 245 | 36 | 1 | 1 | 236 | 1 | 245 | 2.16e-141 | 416 |
MS.gene048191.t1 | MTR_0337s0040 | 71.923 | 260 | 33 | 2 | 1 | 259 | 1 | 221 | 6.16e-124 | 370 |
MS.gene048191.t1 | MTR_3g008240 | 83.744 | 203 | 32 | 1 | 1 | 202 | 1 | 203 | 1.02e-117 | 353 |
MS.gene048191.t1 | MTR_4g040430 | 83.168 | 202 | 30 | 1 | 1 | 202 | 1 | 198 | 3.52e-117 | 352 |
MS.gene048191.t1 | MTR_0337s0060 | 59.494 | 316 | 28 | 4 | 447 | 759 | 21 | 239 | 4.89e-110 | 335 |
MS.gene048191.t1 | MTR_5g071590 | 72.778 | 180 | 36 | 2 | 1 | 167 | 1 | 180 | 4.89e-89 | 278 |
MS.gene048191.t1 | MTR_1g055240 | 88.028 | 142 | 17 | 0 | 91 | 232 | 3 | 144 | 5.39e-87 | 271 |
MS.gene048191.t1 | MTR_0019s0290 | 82.237 | 152 | 27 | 0 | 82 | 233 | 9 | 160 | 2.25e-86 | 270 |
MS.gene048191.t1 | MTR_3g028680 | 80.132 | 151 | 27 | 1 | 618 | 765 | 1 | 151 | 1.56e-78 | 251 |
MS.gene048191.t1 | MTR_2g067090 | 77.027 | 148 | 31 | 1 | 621 | 765 | 99 | 246 | 2.38e-69 | 230 |
MS.gene048191.t1 | MTR_4g133495 | 62.983 | 181 | 41 | 2 | 576 | 753 | 88 | 245 | 6.30e-67 | 223 |
MS.gene048191.t1 | MTR_4g133340 | 62.983 | 181 | 41 | 2 | 576 | 753 | 88 | 245 | 6.30e-67 | 223 |
MS.gene048191.t1 | MTR_1281s0010 | 79.817 | 109 | 22 | 0 | 19 | 127 | 1 | 109 | 4.71e-56 | 187 |
MS.gene048191.t1 | MTR_6g051425 | 32.075 | 318 | 185 | 6 | 40 | 341 | 22 | 324 | 1.06e-38 | 147 |
MS.gene048191.t1 | MTR_4g008820 | 69.000 | 100 | 30 | 1 | 1 | 99 | 125 | 224 | 2.68e-31 | 130 |
MS.gene048191.t1 | MTR_8g046060 | 76.136 | 88 | 12 | 2 | 1 | 79 | 91 | 178 | 6.72e-31 | 121 |
MS.gene048191.t1 | MTR_1g070355 | 26.543 | 324 | 217 | 6 | 41 | 362 | 80 | 384 | 6.45e-19 | 91.7 |
MS.gene048191.t1 | MTR_2g067130 | 67.164 | 67 | 16 | 2 | 702 | 765 | 53 | 116 | 2.82e-18 | 82.8 |
MS.gene048191.t1 | MTR_0402s0040 | 25.405 | 185 | 119 | 4 | 49 | 233 | 40 | 205 | 1.55e-14 | 77.4 |
MS.gene048191.t1 | MTR_0337s0050 | 75.000 | 36 | 9 | 0 | 259 | 294 | 14 | 49 | 1.69e-13 | 66.6 |
MS.gene048191.t1 | MTR_4g035820 | 22.414 | 290 | 192 | 7 | 17 | 299 | 61 | 324 | 8.51e-13 | 72.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene048191.t1 | AT4G38180 | 27.613 | 641 | 384 | 13 | 32 | 665 | 70 | 637 | 3.76e-70 | 246 |
MS.gene048191.t1 | AT4G15090 | 24.827 | 721 | 448 | 16 | 50 | 753 | 66 | 709 | 4.82e-60 | 218 |
MS.gene048191.t1 | AT4G15090 | 24.827 | 721 | 448 | 16 | 50 | 753 | 66 | 709 | 4.82e-60 | 218 |
MS.gene048191.t1 | AT4G15090 | 24.827 | 721 | 448 | 16 | 50 | 753 | 66 | 709 | 4.82e-60 | 218 |
MS.gene048191.t1 | AT4G15090 | 24.827 | 721 | 448 | 16 | 50 | 753 | 66 | 709 | 4.82e-60 | 218 |
MS.gene048191.t1 | AT4G15090 | 24.827 | 721 | 448 | 16 | 50 | 753 | 66 | 709 | 4.82e-60 | 218 |
MS.gene048191.t1 | AT2G27110 | 26.298 | 597 | 366 | 15 | 127 | 719 | 108 | 634 | 9.17e-53 | 197 |
MS.gene048191.t1 | AT2G27110 | 26.298 | 597 | 366 | 15 | 127 | 719 | 108 | 634 | 9.17e-53 | 197 |
MS.gene048191.t1 | AT2G27110 | 27.308 | 509 | 313 | 11 | 213 | 719 | 36 | 489 | 1.71e-52 | 194 |
MS.gene048191.t1 | AT3G06250 | 24.961 | 633 | 352 | 16 | 34 | 661 | 189 | 703 | 9.88e-52 | 193 |
MS.gene048191.t1 | AT3G06250 | 24.961 | 633 | 352 | 16 | 34 | 661 | 189 | 703 | 9.88e-52 | 193 |
MS.gene048191.t1 | AT3G06250 | 24.961 | 633 | 352 | 16 | 34 | 661 | 189 | 703 | 9.88e-52 | 193 |
MS.gene048191.t1 | AT1G76320 | 24.852 | 676 | 412 | 19 | 50 | 719 | 12 | 597 | 1.20e-50 | 189 |
MS.gene048191.t1 | AT1G76320 | 24.852 | 676 | 412 | 19 | 50 | 719 | 12 | 597 | 3.77e-50 | 188 |
MS.gene048191.t1 | AT1G76320 | 24.852 | 676 | 412 | 19 | 50 | 719 | 12 | 597 | 4.12e-50 | 188 |
MS.gene048191.t1 | AT1G76320 | 24.852 | 676 | 412 | 19 | 50 | 719 | 12 | 597 | 4.12e-50 | 188 |
MS.gene048191.t1 | AT3G22170 | 23.186 | 634 | 398 | 14 | 34 | 662 | 69 | 618 | 2.27e-48 | 184 |
MS.gene048191.t1 | AT3G22170 | 23.186 | 634 | 398 | 14 | 34 | 662 | 69 | 618 | 2.27e-48 | 184 |
MS.gene048191.t1 | AT5G18960 | 24.575 | 647 | 360 | 18 | 24 | 661 | 200 | 727 | 4.47e-46 | 177 |
MS.gene048191.t1 | AT5G18960 | 24.575 | 647 | 360 | 18 | 24 | 661 | 200 | 727 | 4.47e-46 | 177 |
MS.gene048191.t1 | AT4G38170 | 25.290 | 431 | 264 | 11 | 235 | 662 | 24 | 399 | 4.51e-44 | 167 |
MS.gene048191.t1 | AT1G10240 | 24.880 | 623 | 376 | 19 | 49 | 659 | 62 | 604 | 1.59e-42 | 165 |
MS.gene048191.t1 | AT1G10240 | 24.880 | 623 | 376 | 19 | 49 | 659 | 62 | 604 | 1.59e-42 | 165 |
MS.gene048191.t1 | AT5G28530 | 24.100 | 639 | 388 | 17 | 40 | 660 | 60 | 619 | 8.97e-42 | 163 |
MS.gene048191.t1 | AT5G28530 | 23.944 | 639 | 385 | 18 | 40 | 660 | 60 | 615 | 6.26e-41 | 160 |
MS.gene048191.t1 | AT5G28530 | 23.944 | 639 | 385 | 18 | 40 | 660 | 60 | 615 | 6.26e-41 | 160 |
MS.gene048191.t1 | AT2G32250 | 23.758 | 745 | 431 | 20 | 4 | 743 | 10 | 622 | 7.45e-41 | 160 |
MS.gene048191.t1 | AT2G32250 | 23.758 | 745 | 431 | 20 | 4 | 743 | 10 | 622 | 1.06e-40 | 160 |
MS.gene048191.t1 | AT2G32250 | 23.758 | 745 | 431 | 20 | 4 | 743 | 10 | 622 | 1.06e-40 | 160 |
MS.gene048191.t1 | AT2G32250 | 23.758 | 745 | 431 | 20 | 4 | 743 | 10 | 622 | 1.06e-40 | 160 |
MS.gene048191.t1 | AT2G32250 | 23.758 | 745 | 431 | 20 | 4 | 743 | 10 | 622 | 1.11e-40 | 160 |
MS.gene048191.t1 | AT2G32250 | 23.758 | 745 | 431 | 20 | 4 | 743 | 10 | 622 | 1.11e-40 | 160 |
MS.gene048191.t1 | AT2G32250 | 23.729 | 708 | 406 | 18 | 41 | 743 | 3 | 581 | 4.36e-40 | 158 |
MS.gene048191.t1 | AT2G32250 | 23.729 | 708 | 406 | 18 | 41 | 743 | 3 | 581 | 5.56e-40 | 158 |
MS.gene048191.t1 | AT1G80010 | 24.100 | 639 | 390 | 22 | 41 | 662 | 101 | 661 | 4.20e-37 | 149 |
MS.gene048191.t1 | AT1G52520 | 22.311 | 623 | 408 | 15 | 41 | 662 | 91 | 638 | 1.30e-33 | 138 |
MS.gene048191.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 219 | 483 | 163 | 426 | 1.49e-27 | 119 |
MS.gene048191.t1 | AT4G19990 | 34.351 | 131 | 76 | 2 | 591 | 721 | 495 | 615 | 2.15e-12 | 71.2 |
MS.gene048191.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 219 | 483 | 177 | 440 | 1.84e-27 | 119 |
MS.gene048191.t1 | AT4G19990 | 34.351 | 131 | 76 | 2 | 591 | 721 | 509 | 629 | 2.27e-12 | 71.2 |
MS.gene048191.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 219 | 483 | 106 | 369 | 1.93e-27 | 119 |
MS.gene048191.t1 | AT4G19990 | 34.351 | 131 | 76 | 2 | 591 | 721 | 438 | 558 | 2.17e-12 | 71.2 |
MS.gene048191.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 219 | 483 | 163 | 426 | 2.07e-27 | 119 |
MS.gene048191.t1 | AT4G19990 | 34.351 | 131 | 76 | 2 | 591 | 721 | 495 | 615 | 2.23e-12 | 71.2 |
MS.gene048191.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 219 | 483 | 163 | 426 | 2.07e-27 | 119 |
MS.gene048191.t1 | AT4G19990 | 34.351 | 131 | 76 | 2 | 591 | 721 | 495 | 615 | 2.23e-12 | 71.2 |
MS.gene048191.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 219 | 483 | 163 | 426 | 2.40e-27 | 119 |
MS.gene048191.t1 | AT4G19990 | 34.351 | 131 | 76 | 2 | 591 | 721 | 495 | 615 | 2.08e-12 | 71.2 |
MS.gene048191.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 219 | 483 | 163 | 426 | 2.40e-27 | 119 |
MS.gene048191.t1 | AT4G19990 | 34.351 | 131 | 76 | 2 | 591 | 721 | 495 | 615 | 2.08e-12 | 71.2 |
MS.gene048191.t1 | AT5G28530 | 21.781 | 629 | 352 | 20 | 40 | 660 | 60 | 556 | 1.88e-22 | 103 |
MS.gene048191.t1 | AT5G28530 | 21.622 | 629 | 349 | 21 | 40 | 660 | 60 | 552 | 1.12e-21 | 100 |
Find 113 sgRNAs with CRISPR-Local
Find 169 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCATGCTGAGTTGGACTTTA+AGG | 0.133287 | 2.3:+63258251 | MS.gene048191:CDS |
TTTCGATGAGTTAACTAATT+TGG | 0.156761 | 2.3:+63257942 | MS.gene048191:CDS |
AGTCGCTTCTTTGACCTAAT+TGG | 0.186128 | 2.3:-63259077 | None:intergenic |
CTTTAGTCATTTCAACATTA+TGG | 0.194287 | 2.3:+63258209 | MS.gene048191:CDS |
CAACAAGATTATGCTCTATT+TGG | 0.198611 | 2.3:+63257158 | MS.gene048191:CDS |
TTCATTTCAGCTGCCTTTCT+TGG | 0.201003 | 2.3:+63257661 | MS.gene048191:intron |
CATCGTAAGAGTGTGTTATT+TGG | 0.276792 | 2.3:+63257694 | MS.gene048191:CDS |
TATGGTTTGAGGTTTCTTAT+TGG | 0.280533 | 2.3:-63257788 | None:intergenic |
TTCTTTGACCTAATTGGATT+TGG | 0.299426 | 2.3:-63259071 | None:intergenic |
AATCAGATTTCGACTACAAT+TGG | 0.318540 | 2.3:+63257983 | MS.gene048191:CDS |
TGTTCTTGAGGCAGGGAAAA+AGG | 0.322946 | 2.3:+63258923 | MS.gene048191:CDS |
GCCGATATTTATTGTTTGTT+CGG | 0.341758 | 2.3:-63257208 | None:intergenic |
GGTTTCGAATGTTGATGTTT+TGG | 0.354913 | 2.3:+63258506 | MS.gene048191:CDS |
ACTAGCCTGGTCTGTGTATA+TGG | 0.360230 | 2.3:-63257806 | None:intergenic |
TATGCATTGGTCTTCAGTTT+GGG | 0.370760 | 2.3:+63258083 | MS.gene048191:CDS |
GTCTTTAATGCCAACATTCA+TGG | 0.378784 | 2.3:-63258799 | None:intergenic |
CTCAACGGTGTTCTTGAGGC+AGG | 0.386173 | 2.3:+63258915 | MS.gene048191:CDS |
AACAATAAATATCGGCCATT+AGG | 0.388497 | 2.3:+63257215 | MS.gene048191:CDS |
ACCGAACAAACAATAAATAT+CGG | 0.389395 | 2.3:+63257207 | MS.gene048191:CDS |
GTATGCATTGGTCTTCAGTT+TGG | 0.392120 | 2.3:+63258082 | MS.gene048191:CDS |
TTCTCATACTCAACAAGAAC+TGG | 0.395633 | 2.3:-63256678 | None:intergenic |
AAGAAAGACCAAATCCAATT+AGG | 0.397771 | 2.3:+63259063 | MS.gene048191:CDS |
TTTGGTCTTTCTTTGAACTT+TGG | 0.398856 | 2.3:-63259053 | None:intergenic |
TTCCTTCAAATACTATTATG+AGG | 0.399583 | 2.3:+63258383 | MS.gene048191:CDS |
GAGGAGTTTCTTATTTCTAA+AGG | 0.403538 | 2.3:+63258948 | MS.gene048191:CDS |
TAAAGAATCATGGAAGTCTT+TGG | 0.408500 | 2.3:+63256449 | MS.gene048191:CDS |
CATGTCGTATGTTTGAGAAC+CGG | 0.411671 | 2.3:+63258631 | MS.gene048191:CDS |
GATTATGATCTTCAAACCTT+GGG | 0.413114 | 2.3:-63258554 | None:intergenic |
ATAACACTGGATTCTCTGTT+AGG | 0.417808 | 2.3:+63256520 | MS.gene048191:CDS |
GGGTTGTCACAGTCGACATT+AGG | 0.419786 | 2.3:+63258589 | MS.gene048191:CDS |
CGATTATGATCTTCAAACCT+TGG | 0.425681 | 2.3:-63258555 | None:intergenic |
CGAGAAGTAAATGAAGTTCA+AGG | 0.430014 | 2.3:+63256855 | MS.gene048191:CDS |
AGCTGGAATATATTTGAAGT+TGG | 0.433136 | 2.3:+63256737 | MS.gene048191:CDS |
TGGTCTGTGTATATGGTTTG+AGG | 0.447350 | 2.3:-63257799 | None:intergenic |
GAAAGGGTTGGTTGTAAAGC+TGG | 0.447509 | 2.3:+63256720 | MS.gene048191:CDS |
CGCTTTAAAACATATTGTGC+AGG | 0.447633 | 2.3:-63258732 | None:intergenic |
CGTTATGCTTGTAACAAAGA+AGG | 0.449439 | 2.3:+63256603 | MS.gene048191:CDS |
GCTTTAATAAATTCTAAAGC+TGG | 0.450264 | 2.3:+63256885 | MS.gene048191:CDS |
ATCTGAGAGTGGACAATTGA+CGG | 0.452529 | 2.3:+63256374 | MS.gene048191:CDS |
TGGTCTTTGCTCATGGCACA+TGG | 0.452802 | 2.3:+63257873 | MS.gene048191:CDS |
GGCCTACTTCGGACTTTAAG+TGG | 0.458978 | 2.3:+63258037 | MS.gene048191:CDS |
ATGTCGTATGTTTGAGAACC+GGG | 0.461344 | 2.3:+63258632 | MS.gene048191:CDS |
ACAAAATAAGAAATCGGATA+AGG | 0.469178 | 2.3:+63256569 | MS.gene048191:CDS |
GAAGTGATGGGTCAAGGAGT+TGG | 0.484292 | 2.3:+63256930 | MS.gene048191:CDS |
CTCCTCATAATAGTATTTGA+AGG | 0.485089 | 2.3:-63258385 | None:intergenic |
TTACAACCAACCCTTTCCTC+TGG | 0.485330 | 2.3:-63256714 | None:intergenic |
TTTAATTATGCATATAACAC+TGG | 0.485542 | 2.3:+63256507 | MS.gene048191:CDS |
TCTAATGACAACTCGTCAAA+AGG | 0.488137 | 2.3:+63256998 | MS.gene048191:CDS |
CTCAAGTAGCACAAATGCTC+TGG | 0.489977 | 2.3:-63256825 | None:intergenic |
CAATTCACAAAATAAGAAAT+CGG | 0.490263 | 2.3:+63256563 | MS.gene048191:CDS |
TATGAGGAGGACACAACAAA+AGG | 0.490908 | 2.3:+63258399 | MS.gene048191:CDS |
ATGATTGTCAAAACCAAGAA+AGG | 0.491378 | 2.3:-63257674 | None:intergenic |
CTGTCTATGAACCATCTGTT+GGG | 0.491412 | 2.3:+63259024 | MS.gene048191:CDS |
ATCAGATTTCGACTACAATT+GGG | 0.491708 | 2.3:+63257984 | MS.gene048191:CDS |
CGTCAAAAGGAGATGGTGGC+TGG | 0.492100 | 2.3:+63257011 | MS.gene048191:CDS |
ACATTATGGTTCAGAGAATG+AGG | 0.494022 | 2.3:+63258223 | MS.gene048191:CDS |
GACCGCATAAGCTGACTGTT+GGG | 0.496307 | 2.3:-63258303 | None:intergenic |
GAGAACATCTTATGAAGTGA+TGG | 0.499875 | 2.3:+63256917 | MS.gene048191:CDS |
TGTCTTCTGCAGCATCAACT+TGG | 0.502977 | 2.3:-63257103 | None:intergenic |
AAATGCTCTGGTTTATGTAA+TGG | 0.504865 | 2.3:-63256813 | None:intergenic |
CTCATTCAAATCGTATGCAT+TGG | 0.507227 | 2.3:+63258070 | MS.gene048191:CDS |
ATCATAATCGACTTGATGAA+AGG | 0.507955 | 2.3:+63258568 | MS.gene048191:CDS |
TTTAAGTCCGAAAATCGAAA+AGG | 0.508080 | 2.3:-63256969 | None:intergenic |
GAGGGATAATCATGCTGAGT+TGG | 0.508852 | 2.3:+63258242 | MS.gene048191:CDS |
ATTGGTCTTCAGTTTGGGTG+AGG | 0.509410 | 2.3:+63258088 | MS.gene048191:CDS |
TGTCTATAAGATATATAAGT+GGG | 0.514682 | 2.3:+63256773 | MS.gene048191:CDS |
GATCTTCAAACCTTGGGGAA+AGG | 0.519004 | 2.3:-63258548 | None:intergenic |
TAAAGAATCGAACAAGTGAA+TGG | 0.519618 | 2.3:-63258191 | None:intergenic |
TCATAATCGACTTGATGAAA+GGG | 0.526860 | 2.3:+63258569 | MS.gene048191:CDS |
CATAATAGTATTTGAAGGAA+AGG | 0.529686 | 2.3:-63258380 | None:intergenic |
ACTTCAACAACGCACTAGCC+TGG | 0.534735 | 2.3:-63257819 | None:intergenic |
TAACAAAGAAGGTTTCAAGA+AGG | 0.538422 | 2.3:+63256614 | MS.gene048191:CDS |
AATCGAACAAGTGAATGGTC+TGG | 0.540971 | 2.3:-63258186 | None:intergenic |
ATGAGGAGGACACAACAAAA+GGG | 0.542065 | 2.3:+63258400 | MS.gene048191:CDS |
AACAAAGAAGGTTTCAAGAA+GGG | 0.545537 | 2.3:+63256615 | MS.gene048191:CDS |
CATTTAGTGATAAAGAATCA+TGG | 0.546005 | 2.3:+63256439 | MS.gene048191:CDS |
CTGAAATCCACCATGAATGT+TGG | 0.550323 | 2.3:+63258789 | MS.gene048191:CDS |
TACATGTGTTTGCGCAGATG+CGG | 0.559018 | 2.3:+63258875 | MS.gene048191:CDS |
AATGAAGCTCTCTCGAAACC+AGG | 0.565261 | 2.3:+63257065 | MS.gene048191:CDS |
GCTGTCTATGAACCATCTGT+TGG | 0.568181 | 2.3:+63259023 | MS.gene048191:CDS |
GTGATGGGTCAAGGAGTTGG+AGG | 0.568802 | 2.3:+63256933 | MS.gene048191:CDS |
ATGTCTATAAGATATATAAG+TGG | 0.572287 | 2.3:+63256772 | MS.gene048191:CDS |
GGACCGCATAAGCTGACTGT+TGG | 0.579264 | 2.3:-63258304 | None:intergenic |
TTTGGTGCAGTCCCAACAGA+TGG | 0.581566 | 2.3:-63259035 | None:intergenic |
ATGTGTTTGCGCAGATGCGG+AGG | 0.585249 | 2.3:+63258878 | MS.gene048191:CDS |
TGGTGTATACTTGTTTACTA+CGG | 0.585960 | 2.3:-63258325 | None:intergenic |
ATATTAACTTCATCTGAGAG+TGG | 0.588105 | 2.3:+63256363 | MS.gene048191:CDS |
TCTTATGAAGTGATGGGTCA+AGG | 0.589029 | 2.3:+63256924 | MS.gene048191:CDS |
TCAACGGTGTTCTTGAGGCA+GGG | 0.590097 | 2.3:+63258916 | MS.gene048191:CDS |
ATTTCTCAACGGTGTTCTTG+AGG | 0.591378 | 2.3:+63258911 | MS.gene048191:CDS |
TTGAAGAAAACCTTTCCCCA+AGG | 0.594796 | 2.3:+63258538 | MS.gene048191:CDS |
TGAAGACTTAGAAGGCGTAA+CGG | 0.598405 | 2.3:-63258991 | None:intergenic |
GACAACTCGTCAAAAGGAGA+TGG | 0.599038 | 2.3:+63257004 | MS.gene048191:CDS |
TTGATATCGTTGTGCTTGAG+TGG | 0.601464 | 2.3:-63258823 | None:intergenic |
AGAACATCTTATGAAGTGAT+GGG | 0.601988 | 2.3:+63256918 | MS.gene048191:CDS |
AACTCGTCAAAAGGAGATGG+TGG | 0.603142 | 2.3:+63257007 | MS.gene048191:CDS |
ATCCCAACAGTCAGCTTATG+CGG | 0.606153 | 2.3:+63258301 | MS.gene048191:CDS |
CTTCAAATACTATTATGAGG+AGG | 0.607664 | 2.3:+63258386 | MS.gene048191:CDS |
AGAACTGGACTGTCACATGT+TGG | 0.620791 | 2.3:-63256663 | None:intergenic |
AGCCACTTAAAGTCCGAAGT+AGG | 0.621799 | 2.3:-63258039 | None:intergenic |
GGGTCAAGGAGTTGGAGGCA+CGG | 0.621882 | 2.3:+63256938 | MS.gene048191:CDS |
ATTATGATCTTCAAACCTTG+GGG | 0.630358 | 2.3:-63258553 | None:intergenic |
TTTAATGCCAACATTCATGG+TGG | 0.632731 | 2.3:-63258796 | None:intergenic |
GGTCTTTGCTCATGGCACAT+GGG | 0.639768 | 2.3:+63257874 | MS.gene048191:CDS |
CATTATGGTTCAGAGAATGA+GGG | 0.643278 | 2.3:+63258224 | MS.gene048191:CDS |
GATTTCAGCTTATCGACAGA+CGG | 0.644926 | 2.3:-63258774 | None:intergenic |
TGAATAAATGAAAAGCAAGA+TGG | 0.655697 | 2.3:-63258345 | None:intergenic |
GCATCTGAAATATTTCTCAA+CGG | 0.661104 | 2.3:+63258900 | MS.gene048191:CDS |
CATGTCGACATAAGAAACCC+CGG | 0.663279 | 2.3:-63258650 | None:intergenic |
TGTCGTATGTTTGAGAACCG+GGG | 0.673760 | 2.3:+63258633 | MS.gene048191:CDS |
ATGTTGATAATGATAATGAG+AGG | 0.683310 | 2.3:+63258484 | MS.gene048191:CDS |
TCAAACCATATACACAGACC+AGG | 0.683597 | 2.3:+63257801 | MS.gene048191:CDS |
TGTTGATAATGATAATGAGA+GGG | 0.689129 | 2.3:+63258485 | MS.gene048191:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATGTCTATAAGATATATAAG+TGG | + | chr2.3:63256772-63256791 | MS.gene048191:CDS | 20.0% |
!! | CAATTCACAAAATAAGAAAT+CGG | + | chr2.3:63256563-63256582 | MS.gene048191:CDS | 20.0% |
!! | TGTCTATAAGATATATAAGT+GGG | + | chr2.3:63256773-63256792 | MS.gene048191:CDS | 20.0% |
!! | TTTAATTATGCATATAACAC+TGG | + | chr2.3:63256507-63256526 | MS.gene048191:CDS | 20.0% |
!!! | AATTTAATGTTCTGGTTTAT+GGG | + | chr2.3:63257390-63257409 | MS.gene048191:intron | 20.0% |
!!! | ATGATGAAAAACTGTTTTAA+TGG | + | chr2.3:63258012-63258031 | MS.gene048191:CDS | 20.0% |
!!! | TGAATGTTTATATTGATTGA+AGG | + | chr2.3:63257362-63257381 | MS.gene048191:intron | 20.0% |
! | AAAACACCTTGAAAAACATT+CGG | - | chr2.3:63257850-63257869 | None:intergenic | 25.0% |
! | ACAAAATAAGAAATCGGATA+AGG | + | chr2.3:63256569-63256588 | MS.gene048191:CDS | 25.0% |
! | ACCGAACAAACAATAAATAT+CGG | + | chr2.3:63257207-63257226 | MS.gene048191:CDS | 25.0% |
! | AGTACAAAATACTAACCTAA+TGG | - | chr2.3:63257233-63257252 | None:intergenic | 25.0% |
! | CATAATAGTATTTGAAGGAA+AGG | - | chr2.3:63258383-63258402 | None:intergenic | 25.0% |
! | CATTTAGTGATAAAGAATCA+TGG | + | chr2.3:63256439-63256458 | MS.gene048191:CDS | 25.0% |
! | CTTTAGTCATTTCAACATTA+TGG | + | chr2.3:63258209-63258228 | MS.gene048191:CDS | 25.0% |
! | TGAAATTTGAATGAATGTTC+TGG | + | chr2.3:63257280-63257299 | MS.gene048191:intron | 25.0% |
! | TGAATAAATGAAAAGCAAGA+TGG | - | chr2.3:63258348-63258367 | None:intergenic | 25.0% |
! | TTCCTTCAAATACTATTATG+AGG | + | chr2.3:63258383-63258402 | MS.gene048191:CDS | 25.0% |
! | TTTCGATGAGTTAACTAATT+TGG | + | chr2.3:63257942-63257961 | MS.gene048191:CDS | 25.0% |
!! | AGGTTTAGAATTTAATGTTC+TGG | + | chr2.3:63257382-63257401 | MS.gene048191:intron | 25.0% |
!! | TGTTGTATTTTGTTCTGATT+TGG | + | chr2.3:63257638-63257657 | MS.gene048191:intron | 25.0% |
!!! | ATGTTGATAATGATAATGAG+AGG | + | chr2.3:63258484-63258503 | MS.gene048191:CDS | 25.0% |
!!! | CTTATTTTGTGAATTGTTCT+TGG | - | chr2.3:63256559-63256578 | None:intergenic | 25.0% |
!!! | GAATTTAATGTTCTGGTTTA+TGG | + | chr2.3:63257389-63257408 | MS.gene048191:intron | 25.0% |
!!! | GCTTTAATAAATTCTAAAGC+TGG | + | chr2.3:63256885-63256904 | MS.gene048191:CDS | 25.0% |
!!! | TGAAAAACTGTTTTAATGGA+AGG | + | chr2.3:63258016-63258035 | MS.gene048191:CDS | 25.0% |
!!! | TGTTGATAATGATAATGAGA+GGG | + | chr2.3:63258485-63258504 | MS.gene048191:CDS | 25.0% |
AAACACATATGATCTTTCCA+TGG | - | chr2.3:63257453-63257472 | None:intergenic | 30.0% | |
AACAAAGAAGGTTTCAAGAA+GGG | + | chr2.3:63256615-63256634 | MS.gene048191:CDS | 30.0% | |
AACAATAAATATCGGCCATT+AGG | + | chr2.3:63257215-63257234 | MS.gene048191:CDS | 30.0% | |
AAGAAAGACCAAATCCAATT+AGG | + | chr2.3:63259063-63259082 | MS.gene048191:CDS | 30.0% | |
AATCAGATTTCGACTACAAT+TGG | + | chr2.3:63257983-63258002 | MS.gene048191:CDS | 30.0% | |
AGAACATCTTATGAAGTGAT+GGG | + | chr2.3:63256918-63256937 | MS.gene048191:CDS | 30.0% | |
ATATTAACTTCATCTGAGAG+TGG | + | chr2.3:63256363-63256382 | MS.gene048191:CDS | 30.0% | |
ATCAGATTTCGACTACAATT+GGG | + | chr2.3:63257984-63258003 | MS.gene048191:CDS | 30.0% | |
ATGATTGTCAAAACCAAGAA+AGG | - | chr2.3:63257677-63257696 | None:intergenic | 30.0% | |
ATTATGATCTTCAAACCTTG+GGG | - | chr2.3:63258556-63258575 | None:intergenic | 30.0% | |
CAACAAGATTATGCTCTATT+TGG | + | chr2.3:63257158-63257177 | MS.gene048191:CDS | 30.0% | |
CTCCTCATAATAGTATTTGA+AGG | - | chr2.3:63258388-63258407 | None:intergenic | 30.0% | |
CTGGTATATGTGTGTTAATT+TGG | + | chr2.3:63257319-63257338 | MS.gene048191:intron | 30.0% | |
CTTCAAATACTATTATGAGG+AGG | + | chr2.3:63258386-63258405 | MS.gene048191:CDS | 30.0% | |
GAGAATGCAAAGAAAAATCT+CGG | + | chr2.3:63257898-63257917 | MS.gene048191:CDS | 30.0% | |
GATTATGATCTTCAAACCTT+GGG | - | chr2.3:63258557-63258576 | None:intergenic | 30.0% | |
GCCGATATTTATTGTTTGTT+CGG | - | chr2.3:63257211-63257230 | None:intergenic | 30.0% | |
TAAAGAAAAACCAGAGGAAA+GGG | + | chr2.3:63256704-63256723 | MS.gene048191:CDS | 30.0% | |
TAAAGAATCATGGAAGTCTT+TGG | + | chr2.3:63256449-63256468 | MS.gene048191:CDS | 30.0% | |
TAAAGAATCGAACAAGTGAA+TGG | - | chr2.3:63258194-63258213 | None:intergenic | 30.0% | |
TAACAAAGAAGGTTTCAAGA+AGG | + | chr2.3:63256614-63256633 | MS.gene048191:CDS | 30.0% | |
TGGATATCATAGTAAAAACC+TGG | - | chr2.3:63257086-63257105 | None:intergenic | 30.0% | |
TGGTGTATACTTGTTTACTA+CGG | - | chr2.3:63258328-63258347 | None:intergenic | 30.0% | |
TTCTTTGACCTAATTGGATT+TGG | - | chr2.3:63259074-63259093 | None:intergenic | 30.0% | |
TTTAAGTCCGAAAATCGAAA+AGG | - | chr2.3:63256972-63256991 | None:intergenic | 30.0% | |
TTTCTATTTACACAGCACAA+TGG | + | chr2.3:63257597-63257616 | MS.gene048191:intron | 30.0% | |
! | AAATGCTCTGGTTTATGTAA+TGG | - | chr2.3:63256816-63256835 | None:intergenic | 30.0% |
! | AGCTGGAATATATTTGAAGT+TGG | + | chr2.3:63256737-63256756 | MS.gene048191:CDS | 30.0% |
! | CAAAGTTTTCACAATTGAGA+AGG | + | chr2.3:63258443-63258462 | MS.gene048191:CDS | 30.0% |
! | GAATCTTCCTTTTCGATTTT+CGG | + | chr2.3:63256962-63256981 | MS.gene048191:CDS | 30.0% |
! | GCATCTGAAATATTTCTCAA+CGG | + | chr2.3:63258900-63258919 | MS.gene048191:CDS | 30.0% |
! | TATGGTTTGAGGTTTCTTAT+TGG | - | chr2.3:63257791-63257810 | None:intergenic | 30.0% |
! | TCAATTCCGAATGTTTTTCA+AGG | + | chr2.3:63257841-63257860 | MS.gene048191:CDS | 30.0% |
! | TGAGGCTTTAACAATTTAAG+CGG | + | chr2.3:63259172-63259191 | MS.gene048191:intron | 30.0% |
! | TTTGGTCTTTCTTTGAACTT+TGG | - | chr2.3:63259056-63259075 | None:intergenic | 30.0% |
!! | ACATGTTTTCAAGATTTTGG+AGG | + | chr2.3:63258668-63258687 | MS.gene048191:CDS | 30.0% |
!! | ATCATAATCGACTTGATGAA+AGG | + | chr2.3:63258568-63258587 | MS.gene048191:CDS | 30.0% |
!! | ATGTTCTGGTTTAGAATTGA+AGG | + | chr2.3:63257294-63257313 | MS.gene048191:intron | 30.0% |
!! | GAGGAGTTTCTTATTTCTAA+AGG | + | chr2.3:63258948-63258967 | MS.gene048191:CDS | 30.0% |
!! | TCATAATCGACTTGATGAAA+GGG | + | chr2.3:63258569-63258588 | MS.gene048191:CDS | 30.0% |
!! | TCGACATGTTTTCAAGATTT+TGG | + | chr2.3:63258665-63258684 | MS.gene048191:CDS | 30.0% |
!!! | AAGACATAGCCAGTATTTTT+TGG | + | chr2.3:63257120-63257139 | MS.gene048191:CDS | 30.0% |
!!! | AGACATAGCCAGTATTTTTT+GGG | + | chr2.3:63257121-63257140 | MS.gene048191:CDS | 30.0% |
!!! | CTGCACAATATGTTTTAAAG+CGG | + | chr2.3:63258733-63258752 | MS.gene048191:CDS | 30.0% |
!!! | GTTTTTCAAGGTGTTTTTCA+TGG | + | chr2.3:63257853-63257872 | MS.gene048191:CDS | 30.0% |
ACATTATGGTTCAGAGAATG+AGG | + | chr2.3:63258223-63258242 | MS.gene048191:CDS | 35.0% | |
ATAACACTGGATTCTCTGTT+AGG | + | chr2.3:63256520-63256539 | MS.gene048191:CDS | 35.0% | |
CATAAATTCCAAGGCAAGAT+AGG | - | chr2.3:63257420-63257439 | None:intergenic | 35.0% | |
CATTATGGTTCAGAGAATGA+GGG | + | chr2.3:63258224-63258243 | MS.gene048191:CDS | 35.0% | |
CGAGAAGTAAATGAAGTTCA+AGG | + | chr2.3:63256855-63256874 | MS.gene048191:CDS | 35.0% | |
CGATTATGATCTTCAAACCT+TGG | - | chr2.3:63258558-63258577 | None:intergenic | 35.0% | |
CGTTATGCTTGTAACAAAGA+AGG | + | chr2.3:63256603-63256622 | MS.gene048191:CDS | 35.0% | |
CTAAAGAAAAACCAGAGGAA+AGG | + | chr2.3:63256703-63256722 | MS.gene048191:CDS | 35.0% | |
CTCATTCAAATCGTATGCAT+TGG | + | chr2.3:63258070-63258089 | MS.gene048191:CDS | 35.0% | |
GAAAGCTAAAGAAAAACCAG+AGG | + | chr2.3:63256698-63256717 | MS.gene048191:CDS | 35.0% | |
GAAGCAAAAGAAAGATGATG+AGG | + | chr2.3:63259154-63259173 | MS.gene048191:intron | 35.0% | |
GACAGAAATTCCTTATAGCT+CGG | + | chr2.3:63259129-63259148 | MS.gene048191:intron | 35.0% | |
GAGAACATCTTATGAAGTGA+TGG | + | chr2.3:63256917-63256936 | MS.gene048191:CDS | 35.0% | |
GTCTGCTTAATCCTAAAAAC+AGG | + | chr2.3:63256640-63256659 | MS.gene048191:CDS | 35.0% | |
GTCTTTAATGCCAACATTCA+TGG | - | chr2.3:63258802-63258821 | None:intergenic | 35.0% | |
TCTAATGACAACTCGTCAAA+AGG | + | chr2.3:63256998-63257017 | MS.gene048191:CDS | 35.0% | |
TGTACAGAGCATAAATTCCA+AGG | - | chr2.3:63257429-63257448 | None:intergenic | 35.0% | |
TTCTCATACTCAACAAGAAC+TGG | - | chr2.3:63256681-63256700 | None:intergenic | 35.0% | |
TTTAATGCCAACATTCATGG+TGG | - | chr2.3:63258799-63258818 | None:intergenic | 35.0% | |
! | CATCGTAAGAGTGTGTTATT+TGG | + | chr2.3:63257694-63257713 | MS.gene048191:CDS | 35.0% |
! | GAGGCTTTAACAATTTAAGC+GGG | + | chr2.3:63259173-63259192 | MS.gene048191:intron | 35.0% |
! | GGTTTCGAATGTTGATGTTT+TGG | + | chr2.3:63258506-63258525 | MS.gene048191:CDS | 35.0% |
! | TCTTTCAATGCTTTTCTTCG+TGG | + | chr2.3:63258153-63258172 | MS.gene048191:CDS | 35.0% |
! | TGGTTTAGAATTGAAGGTTC+TGG | + | chr2.3:63257300-63257319 | MS.gene048191:intron | 35.0% |
! | TTTTAATGGAAGGCCTACTT+CGG | + | chr2.3:63258026-63258045 | MS.gene048191:CDS | 35.0% |
! | TTTTTCATGGTCTTTGCTCA+TGG | + | chr2.3:63257866-63257885 | MS.gene048191:CDS | 35.0% |
!! | ACTGCTTTTGAAGACTTAGA+AGG | - | chr2.3:63259002-63259021 | None:intergenic | 35.0% |
!! | CGCTTTAAAACATATTGTGC+AGG | - | chr2.3:63258735-63258754 | None:intergenic | 35.0% |
!! | TATGCATTGGTCTTCAGTTT+GGG | + | chr2.3:63258083-63258102 | MS.gene048191:CDS | 35.0% |
!! | TTCAAGATTTTGGAGGTCTT+AGG | + | chr2.3:63258675-63258694 | MS.gene048191:CDS | 35.0% |
!!! | AGACATCAGCTACTTTTGAT+TGG | + | chr2.3:63257737-63257756 | MS.gene048191:CDS | 35.0% |
!!! | CACAATATGTTTTAAAGCGG+TGG | + | chr2.3:63258736-63258755 | MS.gene048191:CDS | 35.0% |
AATCGAACAAGTGAATGGTC+TGG | - | chr2.3:63258189-63258208 | None:intergenic | 40.0% | |
ACCTATGATCTTTGCATAGC+TGG | - | chr2.3:63257547-63257566 | None:intergenic | 40.0% | |
AGTCGCTTCTTTGACCTAAT+TGG | - | chr2.3:63259080-63259099 | None:intergenic | 40.0% | |
ATCTGAGAGTGGACAATTGA+CGG | + | chr2.3:63256374-63256393 | MS.gene048191:CDS | 40.0% | |
ATGAGGAGGACACAACAAAA+GGG | + | chr2.3:63258400-63258419 | MS.gene048191:CDS | 40.0% | |
ATGTCGTATGTTTGAGAACC+GGG | + | chr2.3:63258632-63258651 | MS.gene048191:CDS | 40.0% | |
ATTTATGCTCTGTACAGCCA+TGG | + | chr2.3:63257433-63257452 | MS.gene048191:intron | 40.0% | |
ATTTCTCAACGGTGTTCTTG+AGG | + | chr2.3:63258911-63258930 | MS.gene048191:CDS | 40.0% | |
CATGTCGTATGTTTGAGAAC+CGG | + | chr2.3:63258631-63258650 | MS.gene048191:CDS | 40.0% | |
CTGAAATCCACCATGAATGT+TGG | + | chr2.3:63258789-63258808 | MS.gene048191:CDS | 40.0% | |
CTGTCTATGAACCATCTGTT+GGG | + | chr2.3:63259024-63259043 | MS.gene048191:CDS | 40.0% | |
GATTTCAGCTTATCGACAGA+CGG | - | chr2.3:63258777-63258796 | None:intergenic | 40.0% | |
TATGAGGAGGACACAACAAA+AGG | + | chr2.3:63258399-63258418 | MS.gene048191:CDS | 40.0% | |
TCAAACCATATACACAGACC+AGG | + | chr2.3:63257801-63257820 | MS.gene048191:CDS | 40.0% | |
TCCAGCTATGCAAAGATCAT+AGG | + | chr2.3:63257543-63257562 | MS.gene048191:intron | 40.0% | |
TCCATCTGCCCAAAAAATAC+TGG | - | chr2.3:63257132-63257151 | None:intergenic | 40.0% | |
TGGTCTGTGTATATGGTTTG+AGG | - | chr2.3:63257802-63257821 | None:intergenic | 40.0% | |
TTCATTTCAGCTGCCTTTCT+TGG | + | chr2.3:63257661-63257680 | MS.gene048191:intron | 40.0% | |
TTGAAGAAAACCTTTCCCCA+AGG | + | chr2.3:63258538-63258557 | MS.gene048191:CDS | 40.0% | |
TTGATATCGTTGTGCTTGAG+TGG | - | chr2.3:63258826-63258845 | None:intergenic | 40.0% | |
TTTGCTTCTTCCGAGCTATA+AGG | - | chr2.3:63259142-63259161 | None:intergenic | 40.0% | |
! | TCATGCTGAGTTGGACTTTA+AGG | + | chr2.3:63258251-63258270 | MS.gene048191:CDS | 40.0% |
! | TGAAGACTTAGAAGGCGTAA+CGG | - | chr2.3:63258994-63259013 | None:intergenic | 40.0% |
!! | AAGATTTTGGAGGTCTTAGG+TGG | + | chr2.3:63258678-63258697 | MS.gene048191:CDS | 40.0% |
!! | GTATGCATTGGTCTTCAGTT+TGG | + | chr2.3:63258082-63258101 | MS.gene048191:CDS | 40.0% |
!! | TCACATGTTGGCCTGTTTTT+AGG | - | chr2.3:63256654-63256673 | None:intergenic | 40.0% |
!! | TCTTATGAAGTGATGGGTCA+AGG | + | chr2.3:63256924-63256943 | MS.gene048191:CDS | 40.0% |
AACTCGTCAAAAGGAGATGG+TGG | + | chr2.3:63257007-63257026 | MS.gene048191:CDS | 45.0% | |
AATGAAGCTCTCTCGAAACC+AGG | + | chr2.3:63257065-63257084 | MS.gene048191:CDS | 45.0% | |
AGAACTGGACTGTCACATGT+TGG | - | chr2.3:63256666-63256685 | None:intergenic | 45.0% | |
AGCCACTTAAAGTCCGAAGT+AGG | - | chr2.3:63258042-63258061 | None:intergenic | 45.0% | |
ATCCCAACAGTCAGCTTATG+CGG | + | chr2.3:63258301-63258320 | MS.gene048191:CDS | 45.0% | |
CATGTCGACATAAGAAACCC+CGG | - | chr2.3:63258653-63258672 | None:intergenic | 45.0% | |
CTCAAGTAGCACAAATGCTC+TGG | - | chr2.3:63256828-63256847 | None:intergenic | 45.0% | |
GAAAAACCAGAGGAAAGGGT+TGG | + | chr2.3:63256708-63256727 | MS.gene048191:CDS | 45.0% | |
GACAACTCGTCAAAAGGAGA+TGG | + | chr2.3:63257004-63257023 | MS.gene048191:CDS | 45.0% | |
GAGGGATAATCATGCTGAGT+TGG | + | chr2.3:63258242-63258261 | MS.gene048191:CDS | 45.0% | |
GATCTTCAAACCTTGGGGAA+AGG | - | chr2.3:63258551-63258570 | None:intergenic | 45.0% | |
GCTGTCTATGAACCATCTGT+TGG | + | chr2.3:63259023-63259042 | MS.gene048191:CDS | 45.0% | |
TACATGTGTTTGCGCAGATG+CGG | + | chr2.3:63258875-63258894 | MS.gene048191:CDS | 45.0% | |
TGTCGTATGTTTGAGAACCG+GGG | + | chr2.3:63258633-63258652 | MS.gene048191:CDS | 45.0% | |
TGTCTTCTGCAGCATCAACT+TGG | - | chr2.3:63257106-63257125 | None:intergenic | 45.0% | |
TGTTCTTGAGGCAGGGAAAA+AGG | + | chr2.3:63258923-63258942 | MS.gene048191:CDS | 45.0% | |
TTACAACCAACCCTTTCCTC+TGG | - | chr2.3:63256717-63256736 | None:intergenic | 45.0% | |
! | ACTAGCCTGGTCTGTGTATA+TGG | - | chr2.3:63257809-63257828 | None:intergenic | 45.0% |
! | GTGAGGTCACATTTTACAGC+TGG | + | chr2.3:63258105-63258124 | MS.gene048191:CDS | 45.0% |
!! | ATTGGTCTTCAGTTTGGGTG+AGG | + | chr2.3:63258088-63258107 | MS.gene048191:CDS | 45.0% |
!! | GAAAGGGTTGGTTGTAAAGC+TGG | + | chr2.3:63256720-63256739 | MS.gene048191:CDS | 45.0% |
!!! | GCCAGTATTTTTTGGGCAGA+TGG | + | chr2.3:63257128-63257147 | MS.gene048191:CDS | 45.0% |
ACTTCAACAACGCACTAGCC+TGG | - | chr2.3:63257822-63257841 | None:intergenic | 50.0% | |
GACCGCATAAGCTGACTGTT+GGG | - | chr2.3:63258306-63258325 | None:intergenic | 50.0% | |
GGCCTACTTCGGACTTTAAG+TGG | + | chr2.3:63258037-63258056 | MS.gene048191:CDS | 50.0% | |
GGGTTGTCACAGTCGACATT+AGG | + | chr2.3:63258589-63258608 | MS.gene048191:CDS | 50.0% | |
GGTCTTTGCTCATGGCACAT+GGG | + | chr2.3:63257874-63257893 | MS.gene048191:CDS | 50.0% | |
TCAACGGTGTTCTTGAGGCA+GGG | + | chr2.3:63258916-63258935 | MS.gene048191:CDS | 50.0% | |
TGGGTGATCCTATCTTGCCT+TGG | + | chr2.3:63257409-63257428 | MS.gene048191:intron | 50.0% | |
TGGTCTTTGCTCATGGCACA+TGG | + | chr2.3:63257873-63257892 | MS.gene048191:CDS | 50.0% | |
! | TTTGGTGCAGTCCCAACAGA+TGG | - | chr2.3:63259038-63259057 | None:intergenic | 50.0% |
!! | GAAGTGATGGGTCAAGGAGT+TGG | + | chr2.3:63256930-63256949 | MS.gene048191:CDS | 50.0% |
ATGTGTTTGCGCAGATGCGG+AGG | + | chr2.3:63258878-63258897 | MS.gene048191:CDS | 55.0% | |
CTCAACGGTGTTCTTGAGGC+AGG | + | chr2.3:63258915-63258934 | MS.gene048191:CDS | 55.0% | |
GGACCGCATAAGCTGACTGT+TGG | - | chr2.3:63258307-63258326 | None:intergenic | 55.0% | |
TGAGGCAGGGAAAAAGGCAG+AGG | + | chr2.3:63258929-63258948 | MS.gene048191:CDS | 55.0% | |
! | CGTCAAAAGGAGATGGTGGC+TGG | + | chr2.3:63257011-63257030 | MS.gene048191:CDS | 55.0% |
!! | GTGATGGGTCAAGGAGTTGG+AGG | + | chr2.3:63256933-63256952 | MS.gene048191:CDS | 55.0% |
GGGTCAAGGAGTTGGAGGCA+CGG | + | chr2.3:63256938-63256957 | MS.gene048191:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.3 | gene | 63256354 | 63259201 | 63256354 | ID=MS.gene048191 |
chr2.3 | mRNA | 63256354 | 63259201 | 63256354 | ID=MS.gene048191.t1;Parent=MS.gene048191 |
chr2.3 | exon | 63256354 | 63257236 | 63256354 | ID=MS.gene048191.t1.exon1;Parent=MS.gene048191.t1 |
chr2.3 | CDS | 63256354 | 63257236 | 63256354 | ID=cds.MS.gene048191.t1;Parent=MS.gene048191.t1 |
chr2.3 | exon | 63257671 | 63259084 | 63257671 | ID=MS.gene048191.t1.exon2;Parent=MS.gene048191.t1 |
chr2.3 | CDS | 63257671 | 63259084 | 63257671 | ID=cds.MS.gene048191.t1;Parent=MS.gene048191.t1 |
chr2.3 | exon | 63259192 | 63259201 | 63259192 | ID=MS.gene048191.t1.exon3;Parent=MS.gene048191.t1 |
chr2.3 | CDS | 63259192 | 63259201 | 63259192 | ID=cds.MS.gene048191.t1;Parent=MS.gene048191.t1 |
Gene Sequence |
Protein sequence |