Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048232.t1 | XP_024631359.1 | 94.7 | 697 | 35 | 1 | 1 | 697 | 1 | 695 | 0.00E+00 | 1354.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048232.t1 | Q9LKR4 | 56.7 | 670 | 284 | 3 | 5 | 670 | 8 | 675 | 2.5e-220 | 766.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048232.t1 | A0A396J3Q9 | 94.7 | 697 | 35 | 1 | 1 | 697 | 1 | 695 | 0.0e+00 | 1354.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene048232.t1 | TF | FAR1 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048232.t1 | MTR_3g450850 | 45.600 | 250 | 117 | 3 | 54 | 295 | 48 | 286 | 6.91e-64 | 216 |
| MS.gene048232.t1 | MTR_4g035820 | 35.273 | 275 | 162 | 5 | 40 | 311 | 63 | 324 | 4.47e-45 | 171 |
| MS.gene048232.t1 | MTR_6g051425 | 28.617 | 311 | 196 | 8 | 31 | 336 | 2 | 291 | 7.63e-25 | 106 |
| MS.gene048232.t1 | MTR_3g012160 | 44.660 | 103 | 47 | 1 | 194 | 296 | 1 | 93 | 3.10e-23 | 94.7 |
| MS.gene048232.t1 | MTR_1g070355 | 28.340 | 247 | 148 | 7 | 59 | 297 | 80 | 305 | 2.74e-19 | 92.4 |
| MS.gene048232.t1 | MTR_5g076070 | 26.141 | 241 | 163 | 5 | 56 | 295 | 56 | 282 | 1.60e-16 | 80.9 |
| MS.gene048232.t1 | MTR_6g014355 | 39.516 | 124 | 63 | 3 | 126 | 247 | 13 | 126 | 7.44e-16 | 78.2 |
| MS.gene048232.t1 | MTR_6g022080 | 30.769 | 143 | 88 | 3 | 65 | 202 | 97 | 233 | 9.49e-12 | 66.2 |
| MS.gene048232.t1 | MTR_7g446520 | 24.280 | 243 | 149 | 5 | 59 | 298 | 94 | 304 | 1.11e-11 | 67.0 |
| MS.gene048232.t1 | MTR_2g101460 | 38.235 | 102 | 60 | 2 | 65 | 165 | 67 | 166 | 1.56e-11 | 64.7 |
| MS.gene048232.t1 | MTR_2g101460 | 38.235 | 102 | 60 | 2 | 65 | 165 | 57 | 156 | 1.95e-11 | 64.3 |
| MS.gene048232.t1 | MTR_3g095940 | 51.724 | 58 | 28 | 0 | 499 | 556 | 86 | 143 | 3.21e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048232.t1 | AT5G28530 | 56.907 | 666 | 285 | 2 | 5 | 670 | 8 | 671 | 0.0 | 792 |
| MS.gene048232.t1 | AT5G28530 | 56.907 | 666 | 285 | 2 | 5 | 670 | 8 | 671 | 0.0 | 792 |
| MS.gene048232.t1 | AT5G28530 | 56.716 | 670 | 284 | 3 | 5 | 670 | 8 | 675 | 0.0 | 787 |
| MS.gene048232.t1 | AT5G28530 | 48.498 | 666 | 278 | 5 | 5 | 670 | 8 | 608 | 0.0 | 635 |
| MS.gene048232.t1 | AT5G28530 | 48.358 | 670 | 277 | 6 | 5 | 670 | 8 | 612 | 0.0 | 630 |
| MS.gene048232.t1 | AT1G10240 | 42.556 | 665 | 353 | 8 | 30 | 678 | 24 | 675 | 0.0 | 546 |
| MS.gene048232.t1 | AT1G10240 | 42.556 | 665 | 353 | 8 | 30 | 678 | 24 | 675 | 0.0 | 546 |
| MS.gene048232.t1 | AT4G38180 | 30.574 | 592 | 381 | 12 | 51 | 627 | 71 | 647 | 4.66e-70 | 244 |
| MS.gene048232.t1 | AT4G15090 | 26.553 | 644 | 422 | 15 | 51 | 670 | 49 | 665 | 1.57e-62 | 224 |
| MS.gene048232.t1 | AT4G15090 | 26.553 | 644 | 422 | 15 | 51 | 670 | 49 | 665 | 1.57e-62 | 224 |
| MS.gene048232.t1 | AT4G15090 | 26.553 | 644 | 422 | 15 | 51 | 670 | 49 | 665 | 1.57e-62 | 224 |
| MS.gene048232.t1 | AT4G15090 | 26.553 | 644 | 422 | 15 | 51 | 670 | 49 | 665 | 1.57e-62 | 224 |
| MS.gene048232.t1 | AT4G15090 | 26.553 | 644 | 422 | 15 | 51 | 670 | 49 | 665 | 1.57e-62 | 224 |
| MS.gene048232.t1 | AT2G27110 | 27.903 | 620 | 369 | 19 | 30 | 622 | 19 | 587 | 7.96e-57 | 207 |
| MS.gene048232.t1 | AT2G27110 | 27.903 | 620 | 369 | 19 | 30 | 622 | 19 | 587 | 7.96e-57 | 207 |
| MS.gene048232.t1 | AT3G06250 | 26.829 | 615 | 353 | 18 | 27 | 612 | 155 | 701 | 7.93e-52 | 192 |
| MS.gene048232.t1 | AT3G06250 | 26.829 | 615 | 353 | 18 | 27 | 612 | 155 | 701 | 7.93e-52 | 192 |
| MS.gene048232.t1 | AT3G06250 | 26.829 | 615 | 353 | 18 | 27 | 612 | 155 | 701 | 7.93e-52 | 192 |
| MS.gene048232.t1 | AT5G18960 | 26.801 | 597 | 361 | 17 | 31 | 612 | 190 | 725 | 1.01e-49 | 186 |
| MS.gene048232.t1 | AT5G18960 | 26.801 | 597 | 361 | 17 | 31 | 612 | 190 | 725 | 1.01e-49 | 186 |
| MS.gene048232.t1 | AT3G22170 | 25.421 | 594 | 367 | 15 | 51 | 613 | 68 | 616 | 1.59e-49 | 186 |
| MS.gene048232.t1 | AT3G22170 | 25.421 | 594 | 367 | 15 | 51 | 613 | 68 | 616 | 1.59e-49 | 186 |
| MS.gene048232.t1 | AT2G27110 | 30.467 | 407 | 258 | 10 | 234 | 622 | 43 | 442 | 1.09e-48 | 182 |
| MS.gene048232.t1 | AT1G76320 | 26.138 | 681 | 421 | 23 | 57 | 696 | 1 | 640 | 3.11e-48 | 181 |
| MS.gene048232.t1 | AT1G76320 | 26.067 | 656 | 408 | 21 | 57 | 679 | 1 | 612 | 9.48e-48 | 180 |
| MS.gene048232.t1 | AT1G76320 | 25.877 | 684 | 419 | 23 | 57 | 696 | 1 | 640 | 1.08e-47 | 180 |
| MS.gene048232.t1 | AT1G76320 | 25.877 | 684 | 419 | 23 | 57 | 696 | 1 | 640 | 1.08e-47 | 180 |
| MS.gene048232.t1 | AT1G52520 | 24.730 | 647 | 422 | 22 | 52 | 668 | 84 | 695 | 1.13e-41 | 162 |
| MS.gene048232.t1 | AT4G19990 | 24.795 | 609 | 373 | 14 | 56 | 632 | 24 | 579 | 3.32e-39 | 155 |
| MS.gene048232.t1 | AT4G19990 | 24.795 | 609 | 373 | 14 | 56 | 632 | 24 | 579 | 3.32e-39 | 155 |
| MS.gene048232.t1 | AT4G19990 | 24.795 | 609 | 373 | 14 | 56 | 632 | 38 | 593 | 3.76e-39 | 155 |
| MS.gene048232.t1 | AT4G19990 | 24.795 | 609 | 373 | 14 | 56 | 632 | 24 | 579 | 3.97e-39 | 155 |
| MS.gene048232.t1 | AT4G19990 | 24.795 | 609 | 373 | 14 | 56 | 632 | 24 | 579 | 5.23e-39 | 154 |
| MS.gene048232.t1 | AT4G19990 | 24.795 | 609 | 373 | 14 | 56 | 632 | 24 | 579 | 5.23e-39 | 154 |
| MS.gene048232.t1 | AT2G32250 | 25.393 | 445 | 311 | 10 | 258 | 685 | 187 | 627 | 8.56e-39 | 154 |
| MS.gene048232.t1 | AT2G32250 | 25.393 | 445 | 311 | 10 | 258 | 685 | 146 | 586 | 8.72e-39 | 154 |
| MS.gene048232.t1 | AT2G32250 | 25.393 | 445 | 311 | 10 | 258 | 685 | 187 | 627 | 8.86e-39 | 154 |
| MS.gene048232.t1 | AT2G32250 | 25.393 | 445 | 311 | 10 | 258 | 685 | 187 | 627 | 8.86e-39 | 154 |
| MS.gene048232.t1 | AT2G32250 | 25.393 | 445 | 311 | 10 | 258 | 685 | 187 | 627 | 9.01e-39 | 154 |
| MS.gene048232.t1 | AT2G32250 | 25.393 | 445 | 311 | 10 | 258 | 685 | 187 | 627 | 9.01e-39 | 154 |
| MS.gene048232.t1 | AT2G32250 | 25.393 | 445 | 311 | 10 | 258 | 685 | 187 | 627 | 9.01e-39 | 154 |
| MS.gene048232.t1 | AT2G32250 | 25.393 | 445 | 311 | 10 | 258 | 685 | 146 | 586 | 1.01e-38 | 154 |
| MS.gene048232.t1 | AT1G80010 | 23.468 | 669 | 439 | 19 | 28 | 657 | 72 | 706 | 2.94e-38 | 152 |
| MS.gene048232.t1 | AT4G19990 | 24.294 | 531 | 334 | 11 | 119 | 632 | 43 | 522 | 2.42e-34 | 140 |
| MS.gene048232.t1 | AT4G38170 | 26.446 | 363 | 254 | 6 | 272 | 622 | 45 | 406 | 9.25e-34 | 137 |
Find 128 sgRNAs with CRISPR-Local
Find 188 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCCAAATGGTTTCTGATTT+TGG | 0.102866 | 2.3:+62859483 | MS.gene048232:CDS |
| ACATATTGATTTACTGTATT+TGG | 0.114052 | 2.3:+62859521 | MS.gene048232:CDS |
| CAGAGGAATTTGAACTTAAA+TGG | 0.181226 | 2.3:+62859460 | MS.gene048232:CDS |
| TTATCTGCTTTCACCGATTC+TGG | 0.206477 | 2.3:-62858243 | None:intergenic |
| TCTTATCGATCGATCACTTA+TGG | 0.237164 | 2.3:+62859023 | MS.gene048232:CDS |
| AGGTGGACATTTGTCTTTCT+TGG | 0.238238 | 2.3:+62858749 | MS.gene048232:CDS |
| CCATTTGCCTTCCTCTTAAC+CGG | 0.251085 | 2.3:-62858456 | None:intergenic |
| AAGCCTTCAAACTAGCTATT+TGG | 0.254902 | 2.3:-62860740 | None:intergenic |
| TGTGCATAATCACGAGCTTT+TGG | 0.288154 | 2.3:+62858590 | MS.gene048232:CDS |
| TGTATTTGGTTCGAGCATAT+TGG | 0.295799 | 2.3:+62859535 | MS.gene048232:CDS |
| GAAAAGGGAAAATGATGTTT+TGG | 0.322914 | 2.3:+62858842 | MS.gene048232:CDS |
| GTATTTGGTTCGAGCATATT+GGG | 0.334419 | 2.3:+62859536 | MS.gene048232:CDS |
| GCTTTCGAAAGCTGGGTTTC+CGG | 0.342293 | 2.3:+62858683 | MS.gene048232:CDS |
| ATACTCTTGCTTTCGAAAGC+TGG | 0.354980 | 2.3:+62858675 | MS.gene048232:CDS |
| TTCTTTCATCAGTTCTTTGC+GGG | 0.358476 | 2.3:-62860627 | None:intergenic |
| ATTGAATGTGGATTTAAATT+CGG | 0.362006 | 2.3:-62859415 | None:intergenic |
| TGCAAGGAATTTGAATCATC+GGG | 0.363156 | 2.3:+62860383 | MS.gene048232:CDS |
| TACCAAACCACACTCCAAAA+AGG | 0.366681 | 2.3:-62859049 | None:intergenic |
| CTCAGGAAATTCACTTCTAA+TGG | 0.369848 | 2.3:-62859313 | None:intergenic |
| AACAATGTCCTTGTGGAGAT+TGG | 0.375018 | 2.3:+62858169 | MS.gene048232:CDS |
| TTAAACACCATTCCAACATA+AGG | 0.399971 | 2.3:-62858294 | None:intergenic |
| TCTAGAATTAGCCCTCAATT+AGG | 0.402768 | 2.3:+62858390 | MS.gene048232:CDS |
| GTCATCATCTGCTTCTTTCG+TGG | 0.402884 | 2.3:-62858886 | None:intergenic |
| AGGCATTGCTTAATGAGAAA+AGG | 0.415782 | 2.3:+62858826 | MS.gene048232:CDS |
| TCTAATGGCATCTTTAAGTC+CGG | 0.417527 | 2.3:-62859298 | None:intergenic |
| TAAACACCATTCCAACATAA+GGG | 0.418566 | 2.3:-62858293 | None:intergenic |
| GAAAATATAGCTTGGTCATA+TGG | 0.423296 | 2.3:+62858948 | MS.gene048232:CDS |
| CCACGTTTAAAGATCGTTCT+CGG | 0.425296 | 2.3:-62860490 | None:intergenic |
| GACATCTTCCTTTCATGAAC+CGG | 0.427391 | 2.3:-62859248 | None:intergenic |
| GAAAATGCTTGAGCTTGAAA+AGG | 0.428355 | 2.3:+62858719 | MS.gene048232:CDS |
| GTCCAAAATCAGAAACCATT+TGG | 0.428679 | 2.3:-62859485 | None:intergenic |
| ATTTCTCAGCAATAAAACTT+TGG | 0.431448 | 2.3:-62860529 | None:intergenic |
| CTGGGTTTGCCCCGGTTAAG+AGG | 0.434319 | 2.3:+62858445 | MS.gene048232:CDS |
| CGGTTAAGAGGAAGGCAAAT+GGG | 0.435855 | 2.3:+62858457 | MS.gene048232:CDS |
| TGCTAAAATGTATCTGTCTA+AGG | 0.437024 | 2.3:+62858521 | MS.gene048232:CDS |
| ACAAATACTACTTAAGTAGA+TGG | 0.437071 | 2.3:+62860465 | MS.gene048232:CDS |
| TACTCTTGCTTTCGAAAGCT+GGG | 0.437822 | 2.3:+62858676 | MS.gene048232:CDS |
| ATGGAGAGCGACACGTGTTA+TGG | 0.440990 | 2.3:+62860330 | MS.gene048232:CDS |
| GTTAATAAGAATGTCGTGTT+TGG | 0.444083 | 2.3:+62858978 | MS.gene048232:CDS |
| GAGCTTGAAAAGGGAATTCA+AGG | 0.444538 | 2.3:+62858729 | MS.gene048232:CDS |
| CGATGCTTTGCAGCAAGAGT+TGG | 0.446058 | 2.3:+62860235 | MS.gene048232:CDS |
| CTACTTAAGTAGTATTTGTC+GGG | 0.448293 | 2.3:-62860461 | None:intergenic |
| CATTTGCCTTCCTCTTAACC+GGG | 0.453188 | 2.3:-62858455 | None:intergenic |
| CTTCAAAAGACGTATGGATT+CGG | 0.455725 | 2.3:+62858142 | MS.gene048232:CDS |
| ACATTTGTCTTTCTTGGAAA+GGG | 0.456261 | 2.3:+62858755 | MS.gene048232:CDS |
| CGTGTTATGGCTACCAGAAA+AGG | 0.458295 | 2.3:+62860343 | MS.gene048232:CDS |
| CAATATACAAATCTTAGAAC+TGG | 0.459994 | 2.3:+62860164 | MS.gene048232:CDS |
| CTCCGCGCATGCTCTTCAAT+TGG | 0.460247 | 2.3:-62860191 | None:intergenic |
| AACCTTCTCATTCTCATCCA+TGG | 0.461287 | 2.3:-62858925 | None:intergenic |
| GTTCTTTCATCAGTTCTTTG+CGG | 0.462201 | 2.3:-62860628 | None:intergenic |
| CTAATGGCATCTTTAAGTCC+GGG | 0.464686 | 2.3:-62859297 | None:intergenic |
| CCTCGATGCAGGTGTTTCTC+CGG | 0.467695 | 2.3:+62859229 | MS.gene048232:intron |
| TTCTAAACAAGGTATCTAGT+TGG | 0.469074 | 2.3:+62859364 | MS.gene048232:CDS |
| ATGGGGAGCATCATAGAGAT+AGG | 0.469186 | 2.3:+62858475 | MS.gene048232:CDS |
| CATAAAAGCATCTATAGACT+TGG | 0.476239 | 2.3:-62859613 | None:intergenic |
| GGCATTGCTTAATGAGAAAA+GGG | 0.476407 | 2.3:+62858827 | MS.gene048232:CDS |
| AGGTTCTGCAGCACCAGAAT+CGG | 0.478841 | 2.3:+62858230 | MS.gene048232:CDS |
| CTGTCTAAGGAGGTTGTTGA+CGG | 0.480756 | 2.3:+62858534 | MS.gene048232:CDS |
| GATATCATTACCCCTTATGT+TGG | 0.483803 | 2.3:+62858282 | MS.gene048232:CDS |
| CCGGTTAAGAGGAAGGCAAA+TGG | 0.486458 | 2.3:+62858456 | MS.gene048232:CDS |
| TCTACTTAAGTAGTATTTGT+CGG | 0.487675 | 2.3:-62860462 | None:intergenic |
| GACATTTGTCTTTCTTGGAA+AGG | 0.490686 | 2.3:+62858754 | MS.gene048232:CDS |
| TGTCTAAGGAGGTTGTTGAC+GGG | 0.496899 | 2.3:+62858535 | MS.gene048232:CDS |
| TGAGACTAAACACGTCATTC+CGG | 0.497303 | 2.3:+62859332 | MS.gene048232:CDS |
| CGCTTGTAAACGCCTAATTG+AGG | 0.499806 | 2.3:-62858402 | None:intergenic |
| TTGCAAGGAATTTGAATCAT+CGG | 0.500581 | 2.3:+62860382 | MS.gene048232:CDS |
| TTATCGATCTGGGTTTGCCC+CGG | 0.501155 | 2.3:+62858437 | MS.gene048232:CDS |
| TCATGAATCTTCCGATAAGC+AGG | 0.501312 | 2.3:-62858636 | None:intergenic |
| TGAACTTAAATGGAGCCAAA+TGG | 0.503893 | 2.3:+62859470 | MS.gene048232:CDS |
| AAAATGCTTGAGCTTGAAAA+GGG | 0.510249 | 2.3:+62858720 | MS.gene048232:CDS |
| TGCAAAGCATCGAAAGCATA+AGG | 0.512230 | 2.3:-62860224 | None:intergenic |
| CATTACCCCTTATGTTGGAA+TGG | 0.512394 | 2.3:+62858287 | MS.gene048232:CDS |
| AGGTCAGATAGAATTGTTTG+TGG | 0.513189 | 2.3:-62859270 | None:intergenic |
| AATCATCGGGAATATTATGC+AGG | 0.520423 | 2.3:+62860396 | MS.gene048232:CDS |
| CAATGGCTTCAAAAGACGTA+TGG | 0.527901 | 2.3:+62858136 | None:intergenic |
| CATCTTTAAGTCCGGGGTCA+AGG | 0.529096 | 2.3:-62859290 | None:intergenic |
| GCTTGTAAACGCCTAATTGA+GGG | 0.531080 | 2.3:-62858401 | None:intergenic |
| GGAATGACGTGTTTAGTCTC+AGG | 0.531762 | 2.3:-62859330 | None:intergenic |
| GAGGGTGATGATTCTGATGA+AGG | 0.535697 | 2.3:+62858210 | MS.gene048232:CDS |
| AAAGGTTATTCAAGAGAATG+AGG | 0.538842 | 2.3:+62858806 | MS.gene048232:CDS |
| TTCAGAATCATCAATTACAA+AGG | 0.545164 | 2.3:+62860589 | MS.gene048232:CDS |
| GTGTTTCTCCGGTTCATGAA+AGG | 0.545182 | 2.3:+62859240 | MS.gene048232:CDS |
| ACTTACTAGAATTCTTAATG+AGG | 0.548103 | 2.3:+62860649 | MS.gene048232:CDS |
| GCTACATCTGAGCTGTATAA+CGG | 0.548265 | 2.3:+62860275 | MS.gene048232:CDS |
| GATAGGAAATCAGTGAGGTG+TGG | 0.551495 | 2.3:+62858492 | MS.gene048232:CDS |
| ACCGATGGGGTCGAGACCGA+TGG | 0.554843 | 2.3:+62860689 | MS.gene048232:CDS |
| GAGATATGTCTAAGACCGAT+GGG | 0.555361 | 2.3:+62860675 | MS.gene048232:CDS |
| AGAAGGTTGAAAATATAGCT+TGG | 0.556814 | 2.3:+62858940 | MS.gene048232:CDS |
| AGAGATATGTCTAAGACCGA+TGG | 0.562467 | 2.3:+62860674 | MS.gene048232:CDS |
| GTTTGCCCCGGTTAAGAGGA+AGG | 0.566980 | 2.3:+62858449 | MS.gene048232:CDS |
| ATTCATGCTGCAAACTCCAT+CGG | 0.569005 | 2.3:-62860705 | None:intergenic |
| ATTCTATCTGACCTTGACCC+CGG | 0.577694 | 2.3:+62859279 | MS.gene048232:CDS |
| ACAAATACTCTGCTCTTGCA+AGG | 0.578215 | 2.3:+62860367 | MS.gene048232:CDS |
| TACCATGGATGAGAATGAGA+AGG | 0.581496 | 2.3:+62858923 | MS.gene048232:CDS |
| CTTTCTTGGAAAGGGATGTG+AGG | 0.596394 | 2.3:+62858763 | MS.gene048232:CDS |
| TGAGTCTCCTTATGTGATTG+AGG | 0.600028 | 2.3:-62860143 | None:intergenic |
| TACCAATTGAAGAGCATGCG+CGG | 0.607691 | 2.3:+62860189 | MS.gene048232:CDS |
| AAATAACCTCTCACATAGGA+CGG | 0.609297 | 2.3:-62859561 | None:intergenic |
| TAATGGCATCTTTAAGTCCG+GGG | 0.609613 | 2.3:-62859296 | None:intergenic |
| GATTTAAATTCGGCATAACG+AGG | 0.612578 | 2.3:-62859405 | None:intergenic |
| GTCTAAGGAGGTTGTTGACG+GGG | 0.619389 | 2.3:+62858536 | MS.gene048232:CDS |
| AAACACCATTCCAACATAAG+GGG | 0.620023 | 2.3:-62858292 | None:intergenic |
| CGGAAACAACAATGTCCTTG+TGG | 0.620981 | 2.3:+62858162 | MS.gene048232:CDS |
| AAGCTGGGTTTCCGGTACAC+CGG | 0.621789 | 2.3:+62858691 | MS.gene048232:CDS |
| GGTTAAGAGGAAGGCAAATG+GGG | 0.628905 | 2.3:+62858458 | MS.gene048232:CDS |
| TCGGCATAACGAGGCCCAAG+AGG | 0.630511 | 2.3:-62859396 | None:intergenic |
| TGGTTTGGTATCAATAGTTG+TGG | 0.630835 | 2.3:+62859062 | MS.gene048232:CDS |
| TCCATCGGTCTCGACCCCAT+CGG | 0.633244 | 2.3:-62860690 | None:intergenic |
| GTGGAATAAGGCATTGAATG+TGG | 0.639736 | 2.3:-62859427 | None:intergenic |
| TGGAGTTTGCAGCATGAATG+TGG | 0.649735 | 2.3:+62860709 | MS.gene048232:CDS |
| TAAAATGTATCTGTCTAAGG+AGG | 0.650992 | 2.3:+62858524 | MS.gene048232:CDS |
| TTGTTGACGGGGTTTCACAG+TGG | 0.656963 | 2.3:+62858547 | MS.gene048232:CDS |
| TGGGCACCGTCCTATGTGAG+AGG | 0.660526 | 2.3:+62859555 | MS.gene048232:CDS |
| ATTTGCCTTCCTCTTAACCG+GGG | 0.662005 | 2.3:-62858454 | None:intergenic |
| TTGTTTAGAATATTCCACAC+CGG | 0.665129 | 2.3:-62859351 | None:intergenic |
| CCGAGAACGATCTTTAAACG+TGG | 0.667057 | 2.3:+62860490 | MS.gene048232:CDS |
| GGTGTGGAATATTCTAAACA+AGG | 0.670977 | 2.3:+62859353 | MS.gene048232:CDS |
| AATGCCCATGAAAATGATTG+TGG | 0.675484 | 2.3:-62859128 | None:intergenic |
| TGCTTATCGGAAGATTCATG+AGG | 0.681046 | 2.3:+62858638 | MS.gene048232:CDS |
| AGAACGATCTTTAAACGTGG+AGG | 0.689325 | 2.3:+62860493 | MS.gene048232:CDS |
| CTTGAAAAGGGAATTCAAGG+TGG | 0.689739 | 2.3:+62858732 | MS.gene048232:CDS |
| AAGTGTTACATTACAAACGA+GGG | 0.690032 | 2.3:+62858192 | MS.gene048232:CDS |
| TAACACTTCCAATCTCCACA+AGG | 0.707021 | 2.3:-62858177 | None:intergenic |
| ATTCCACATCGAGAAAACAG+AGG | 0.714783 | 2.3:+62859443 | MS.gene048232:CDS |
| GAAGTGTTACATTACAAACG+AGG | 0.716498 | 2.3:+62858191 | MS.gene048232:CDS |
| CTAAACACGTCATTCCGGTG+TGG | 0.723440 | 2.3:+62859337 | MS.gene048232:CDS |
| AGATATGTCTAAGACCGATG+GGG | 0.747503 | 2.3:+62860676 | MS.gene048232:CDS |
| ATAGAGATAGGAAATCAGTG+AGG | 0.812534 | 2.3:+62858487 | MS.gene048232:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATTCACAATTCATAAAAT+AGG | + | chr2.3:62860011-62860030 | MS.gene048232:intron | 15.0% |
| !! | ATAATTCATTAGAATGCATT+GGG | - | chr2.3:62859829-62859848 | None:intergenic | 20.0% |
| !! | ATTGAATGTGGATTTAAATT+CGG | - | chr2.3:62859418-62859437 | None:intergenic | 20.0% |
| !!! | ACATATTGATTTACTGTATT+TGG | + | chr2.3:62859521-62859540 | MS.gene048232:CDS | 20.0% |
| !!! | GTCATTTTTATTGTATCTTA+CGG | + | chr2.3:62859974-62859993 | MS.gene048232:intron | 20.0% |
| !!! | TGAAAATAAATTTTCAGCTT+GGG | - | chr2.3:62860573-62860592 | None:intergenic | 20.0% |
| ! | AAAAGATTGACTATACAATG+TGG | - | chr2.3:62859896-62859915 | None:intergenic | 25.0% |
| ! | ACAAATACTACTTAAGTAGA+TGG | + | chr2.3:62860465-62860484 | MS.gene048232:CDS | 25.0% |
| ! | ACTTACTAGAATTCTTAATG+AGG | + | chr2.3:62860649-62860668 | MS.gene048232:CDS | 25.0% |
| ! | ATTTCTCAGCAATAAAACTT+TGG | - | chr2.3:62860532-62860551 | None:intergenic | 25.0% |
| ! | CAATATACAAATCTTAGAAC+TGG | + | chr2.3:62860164-62860183 | MS.gene048232:CDS | 25.0% |
| ! | CATAAGAGGAATATTTATGA+AGG | - | chr2.3:62859200-62859219 | None:intergenic | 25.0% |
| ! | CATAATTCATTAGAATGCAT+TGG | - | chr2.3:62859830-62859849 | None:intergenic | 25.0% |
| ! | TAAAACACAACCGAAAAAAA+TGG | - | chr2.3:62859093-62859112 | None:intergenic | 25.0% |
| ! | TCTACTTAAGTAGTATTTGT+CGG | - | chr2.3:62860465-62860484 | None:intergenic | 25.0% |
| ! | TTCAGAATCATCAATTACAA+AGG | + | chr2.3:62860589-62860608 | MS.gene048232:CDS | 25.0% |
| !! | CTGAAAATAAATTTTCAGCT+TGG | - | chr2.3:62860574-62860593 | None:intergenic | 25.0% |
| !!! | AAAGTTTTATTGCTGAGAAA+TGG | + | chr2.3:62860531-62860550 | MS.gene048232:CDS | 25.0% |
| !!! | ATTTTGTTTGTTATCGATCT+GGG | + | chr2.3:62858427-62858446 | MS.gene048232:CDS | 25.0% |
| !!! | CTTTGTTTATGATTTTACCA+TGG | + | chr2.3:62858908-62858927 | MS.gene048232:CDS | 25.0% |
| !!! | TCTTTGTTTTGTATGGTTTT+CGG | + | chr2.3:62859725-62859744 | MS.gene048232:intron | 25.0% |
| AAAATGCTTGAGCTTGAAAA+GGG | + | chr2.3:62858720-62858739 | MS.gene048232:CDS | 30.0% | |
| AAAGGTTATTCAAGAGAATG+AGG | + | chr2.3:62858806-62858825 | MS.gene048232:CDS | 30.0% | |
| AAGTGTTACATTACAAACGA+GGG | + | chr2.3:62858192-62858211 | MS.gene048232:CDS | 30.0% | |
| ACATTTGTCTTTCTTGGAAA+GGG | + | chr2.3:62858755-62858774 | MS.gene048232:CDS | 30.0% | |
| AGAAGGTTGAAAATATAGCT+TGG | + | chr2.3:62858940-62858959 | MS.gene048232:CDS | 30.0% | |
| ATAGAAATGTCATAAGAGCA+TGG | - | chr2.3:62860071-62860090 | None:intergenic | 30.0% | |
| ATCAAGTTCCAAATCTGAAA+TGG | - | chr2.3:62860041-62860060 | None:intergenic | 30.0% | |
| CAAAAAATAACCTCTCACAT+AGG | - | chr2.3:62859568-62859587 | None:intergenic | 30.0% | |
| CAGAGGAATTTGAACTTAAA+TGG | + | chr2.3:62859460-62859479 | MS.gene048232:CDS | 30.0% | |
| CTACTTAAGTAGTATTTGTC+GGG | - | chr2.3:62860464-62860483 | None:intergenic | 30.0% | |
| CTTTGTGCAAAATCGAAAAA+AGG | + | chr2.3:62858788-62858807 | MS.gene048232:CDS | 30.0% | |
| GAAAATATAGCTTGGTCATA+TGG | + | chr2.3:62858948-62858967 | MS.gene048232:CDS | 30.0% | |
| GTTAATAAGAATGTCGTGTT+TGG | + | chr2.3:62858978-62858997 | MS.gene048232:CDS | 30.0% | |
| TAAAATGTATCTGTCTAAGG+AGG | + | chr2.3:62858524-62858543 | MS.gene048232:CDS | 30.0% | |
| TAAACACCATTCCAACATAA+GGG | - | chr2.3:62858296-62858315 | None:intergenic | 30.0% | |
| TAGGTATTCCATTTCAGATT+TGG | + | chr2.3:62860030-62860049 | MS.gene048232:intron | 30.0% | |
| TATGAATCACCACTTAAACT+TGG | + | chr2.3:62859846-62859865 | MS.gene048232:intron | 30.0% | |
| TGCTAAAATGTATCTGTCTA+AGG | + | chr2.3:62858521-62858540 | MS.gene048232:CDS | 30.0% | |
| TTAAACACCATTCCAACATA+AGG | - | chr2.3:62858297-62858316 | None:intergenic | 30.0% | |
| TTGCAAGGAATTTGAATCAT+CGG | + | chr2.3:62860382-62860401 | MS.gene048232:CDS | 30.0% | |
| ! | AAACACCACAATCATTTTCA+TGG | + | chr2.3:62859123-62859142 | MS.gene048232:CDS | 30.0% |
| ! | AACACCACAATCATTTTCAT+GGG | + | chr2.3:62859124-62859143 | MS.gene048232:CDS | 30.0% |
| ! | ATCACTTATGGATTCCTTTT+TGG | + | chr2.3:62859035-62859054 | MS.gene048232:CDS | 30.0% |
| ! | GAAAAGGGAAAATGATGTTT+TGG | + | chr2.3:62858842-62858861 | MS.gene048232:CDS | 30.0% |
| ! | TTCTAAACAAGGTATCTAGT+TGG | + | chr2.3:62859364-62859383 | MS.gene048232:CDS | 30.0% |
| ! | TTGTTTAGAATATTCCACAC+CGG | - | chr2.3:62859354-62859373 | None:intergenic | 30.0% |
| ! | TTTTCATCCTCAATCACATA+AGG | + | chr2.3:62860136-62860155 | MS.gene048232:CDS | 30.0% |
| !! | CATAAAAGCATCTATAGACT+TGG | - | chr2.3:62859616-62859635 | None:intergenic | 30.0% |
| !!! | CTATGTGAGAGGTTATTTTT+TGG | + | chr2.3:62859566-62859585 | MS.gene048232:CDS | 30.0% |
| !!! | GATTTTGTTTGTTATCGATC+TGG | + | chr2.3:62858426-62858445 | MS.gene048232:CDS | 30.0% |
| AAAACAAAGAGCAAGCACAT+GGG | - | chr2.3:62859715-62859734 | None:intergenic | 35.0% | |
| AAACACCATTCCAACATAAG+GGG | - | chr2.3:62858295-62858314 | None:intergenic | 35.0% | |
| AAATAACCTCTCACATAGGA+CGG | - | chr2.3:62859564-62859583 | None:intergenic | 35.0% | |
| AATCATCGGGAATATTATGC+AGG | + | chr2.3:62860396-62860415 | MS.gene048232:CDS | 35.0% | |
| AATGCCCATGAAAATGATTG+TGG | - | chr2.3:62859131-62859150 | None:intergenic | 35.0% | |
| AGGTCAGATAGAATTGTTTG+TGG | - | chr2.3:62859273-62859292 | None:intergenic | 35.0% | |
| ATAGAGATAGGAAATCAGTG+AGG | + | chr2.3:62858487-62858506 | MS.gene048232:CDS | 35.0% | |
| CGAGGAATAATCATCATAAG+AGG | - | chr2.3:62859214-62859233 | None:intergenic | 35.0% | |
| CTCAGGAAATTCACTTCTAA+TGG | - | chr2.3:62859316-62859335 | None:intergenic | 35.0% | |
| CTTCAAAAGACGTATGGATT+CGG | + | chr2.3:62858142-62858161 | MS.gene048232:CDS | 35.0% | |
| GAAAATGCTTGAGCTTGAAA+AGG | + | chr2.3:62858719-62858738 | MS.gene048232:CDS | 35.0% | |
| GACATTTGTCTTTCTTGGAA+AGG | + | chr2.3:62858754-62858773 | MS.gene048232:CDS | 35.0% | |
| GATATCATTACCCCTTATGT+TGG | + | chr2.3:62858282-62858301 | MS.gene048232:CDS | 35.0% | |
| GATTTAAATTCGGCATAACG+AGG | - | chr2.3:62859408-62859427 | None:intergenic | 35.0% | |
| GGCATTGCTTAATGAGAAAA+GGG | + | chr2.3:62858827-62858846 | MS.gene048232:CDS | 35.0% | |
| GGTGTGGAATATTCTAAACA+AGG | + | chr2.3:62859353-62859372 | MS.gene048232:CDS | 35.0% | |
| GTCCAAAATCAGAAACCATT+TGG | - | chr2.3:62859488-62859507 | None:intergenic | 35.0% | |
| GTTCTTTCATCAGTTCTTTG+CGG | - | chr2.3:62860631-62860650 | None:intergenic | 35.0% | |
| TACAACAGTATCCATGAGAA+GGG | - | chr2.3:62860098-62860117 | None:intergenic | 35.0% | |
| TCTAATGGCATCTTTAAGTC+CGG | - | chr2.3:62859301-62859320 | None:intergenic | 35.0% | |
| TCTTATCGATCGATCACTTA+TGG | + | chr2.3:62859023-62859042 | MS.gene048232:CDS | 35.0% | |
| TGAACTTAAATGGAGCCAAA+TGG | + | chr2.3:62859470-62859489 | MS.gene048232:CDS | 35.0% | |
| TGCAAGGAATTTGAATCATC+GGG | + | chr2.3:62860383-62860402 | MS.gene048232:CDS | 35.0% | |
| TGTACGACACTTCAAAAAGT+TGG | + | chr2.3:62860307-62860326 | MS.gene048232:CDS | 35.0% | |
| TTCTTTCATCAGTTCTTTGC+GGG | - | chr2.3:62860630-62860649 | None:intergenic | 35.0% | |
| ! | AGCCAAATGGTTTCTGATTT+TGG | + | chr2.3:62859483-62859502 | MS.gene048232:CDS | 35.0% |
| ! | AGGCATTGCTTAATGAGAAA+AGG | + | chr2.3:62858826-62858845 | MS.gene048232:CDS | 35.0% |
| ! | ATCATTTTCATGGGCATTAC+AGG | + | chr2.3:62859133-62859152 | MS.gene048232:CDS | 35.0% |
| ! | ATGGTTTCTGATTTTGGACT+TGG | + | chr2.3:62859489-62859508 | MS.gene048232:CDS | 35.0% |
| ! | GAAGTGTTACATTACAAACG+AGG | + | chr2.3:62858191-62858210 | MS.gene048232:CDS | 35.0% |
| ! | GATGAAGCTTTTGAGCATTA+TGG | + | chr2.3:62858324-62858343 | MS.gene048232:CDS | 35.0% |
| ! | GTATTTGGTTCGAGCATATT+GGG | + | chr2.3:62859536-62859555 | MS.gene048232:CDS | 35.0% |
| ! | TCTAGAATTAGCCCTCAATT+AGG | + | chr2.3:62858390-62858409 | MS.gene048232:CDS | 35.0% |
| ! | TGTATTTGGTTCGAGCATAT+TGG | + | chr2.3:62859535-62859554 | MS.gene048232:CDS | 35.0% |
| ! | TGTTTTCTCGATGTGGAATA+AGG | - | chr2.3:62859442-62859461 | None:intergenic | 35.0% |
| ! | TTTCTATTTCTCCCTTCTCA+TGG | + | chr2.3:62860084-62860103 | MS.gene048232:intron | 35.0% |
| !! | CAGAGTATTTGTTCCTTTTC+TGG | - | chr2.3:62860359-62860378 | None:intergenic | 35.0% |
| !! | TCTAGATCTTGCTTTTCTCA+TGG | - | chr2.3:62858376-62858395 | None:intergenic | 35.0% |
| !! | TGGTTTGGTATCAATAGTTG+TGG | + | chr2.3:62859062-62859081 | MS.gene048232:CDS | 35.0% |
| !!! | GCTTTTTTGAACAGGTATGT+TGG | + | chr2.3:62859670-62859689 | MS.gene048232:intron | 35.0% |
| !!! | TGAGAGGTTATTTTTTGGCT+CGG | + | chr2.3:62859571-62859590 | MS.gene048232:CDS | 35.0% |
| !!! | TGCTTGCTCTTTGTTTTGTA+TGG | + | chr2.3:62859718-62859737 | MS.gene048232:intron | 35.0% |
| !!! | TGTGGCAGAACCATTTTTTT+CGG | + | chr2.3:62859080-62859099 | MS.gene048232:CDS | 35.0% |
| !!! | TTTGCGTAGCTTTTTTGAAC+AGG | + | chr2.3:62859662-62859681 | MS.gene048232:CDS | 35.0% |
| AAACAAAGAGCAAGCACATG+GGG | - | chr2.3:62859714-62859733 | None:intergenic | 40.0% | |
| AACAATGTCCTTGTGGAGAT+TGG | + | chr2.3:62858169-62858188 | MS.gene048232:CDS | 40.0% | |
| AACCTTCTCATTCTCATCCA+TGG | - | chr2.3:62858928-62858947 | None:intergenic | 40.0% | |
| ACAAATACTCTGCTCTTGCA+AGG | + | chr2.3:62860367-62860386 | MS.gene048232:CDS | 40.0% | |
| AGAACGATCTTTAAACGTGG+AGG | + | chr2.3:62860493-62860512 | MS.gene048232:CDS | 40.0% | |
| AGGTGGACATTTGTCTTTCT+TGG | + | chr2.3:62858749-62858768 | MS.gene048232:CDS | 40.0% | |
| ATACTCTTGCTTTCGAAAGC+TGG | + | chr2.3:62858675-62858694 | MS.gene048232:CDS | 40.0% | |
| ATTCATGCTGCAAACTCCAT+CGG | - | chr2.3:62860708-62860727 | None:intergenic | 40.0% | |
| ATTCCACATCGAGAAAACAG+AGG | + | chr2.3:62859443-62859462 | MS.gene048232:CDS | 40.0% | |
| CAAAACAAAGAGCAAGCACA+TGG | - | chr2.3:62859716-62859735 | None:intergenic | 40.0% | |
| CATTACCCCTTATGTTGGAA+TGG | + | chr2.3:62858287-62858306 | MS.gene048232:CDS | 40.0% | |
| CCACGTTTAAAGATCGTTCT+CGG | - | chr2.3:62860493-62860512 | None:intergenic | 40.0% | |
| CGACACTTCAAAAAGTTGGA+TGG | + | chr2.3:62860311-62860330 | MS.gene048232:CDS | 40.0% | |
| CTAATGGCATCTTTAAGTCC+GGG | - | chr2.3:62859300-62859319 | None:intergenic | 40.0% | |
| CTACAACAGTATCCATGAGA+AGG | - | chr2.3:62860099-62860118 | None:intergenic | 40.0% | |
| CTTCTCATGGATACTGTTGT+AGG | + | chr2.3:62860097-62860116 | MS.gene048232:intron | 40.0% | |
| CTTGAAAAGGGAATTCAAGG+TGG | + | chr2.3:62858732-62858751 | MS.gene048232:CDS | 40.0% | |
| GACATCTTCCTTTCATGAAC+CGG | - | chr2.3:62859251-62859270 | None:intergenic | 40.0% | |
| GAGCTTGAAAAGGGAATTCA+AGG | + | chr2.3:62858729-62858748 | MS.gene048232:CDS | 40.0% | |
| GCTACATCTGAGCTGTATAA+CGG | + | chr2.3:62860275-62860294 | MS.gene048232:CDS | 40.0% | |
| GCTTGTAAACGCCTAATTGA+GGG | - | chr2.3:62858404-62858423 | None:intergenic | 40.0% | |
| TAACACTTCCAATCTCCACA+AGG | - | chr2.3:62858180-62858199 | None:intergenic | 40.0% | |
| TAATGGCATCTTTAAGTCCG+GGG | - | chr2.3:62859299-62859318 | None:intergenic | 40.0% | |
| TACCAAACCACACTCCAAAA+AGG | - | chr2.3:62859052-62859071 | None:intergenic | 40.0% | |
| TACCATGGATGAGAATGAGA+AGG | + | chr2.3:62858923-62858942 | MS.gene048232:CDS | 40.0% | |
| TACTCTTGCTTTCGAAAGCT+GGG | + | chr2.3:62858676-62858695 | MS.gene048232:CDS | 40.0% | |
| TCATGAATCTTCCGATAAGC+AGG | - | chr2.3:62858639-62858658 | None:intergenic | 40.0% | |
| TCATGGATACTGTTGTAGGT+TGG | + | chr2.3:62860101-62860120 | MS.gene048232:intron | 40.0% | |
| TGAGACTAAACACGTCATTC+CGG | + | chr2.3:62859332-62859351 | MS.gene048232:CDS | 40.0% | |
| TGAGTCTCCTTATGTGATTG+AGG | - | chr2.3:62860146-62860165 | None:intergenic | 40.0% | |
| TGATGATTATTCCTCGATGC+AGG | + | chr2.3:62859218-62859237 | MS.gene048232:intron | 40.0% | |
| TGCTTATCGGAAGATTCATG+AGG | + | chr2.3:62858638-62858657 | MS.gene048232:CDS | 40.0% | |
| TTGGCATCACCAAGTTTAAG+TGG | - | chr2.3:62859858-62859877 | None:intergenic | 40.0% | |
| ! | AGAGATATGTCTAAGACCGA+TGG | + | chr2.3:62860674-62860693 | MS.gene048232:CDS | 40.0% |
| ! | AGATATGTCTAAGACCGATG+GGG | + | chr2.3:62860676-62860695 | MS.gene048232:CDS | 40.0% |
| ! | ATTCCTCTGTTTTCTCGATG+TGG | - | chr2.3:62859449-62859468 | None:intergenic | 40.0% |
| ! | ATTTTCACTATCCGGTGTAC+CGG | - | chr2.3:62858705-62858724 | None:intergenic | 40.0% |
| ! | GAGATATGTCTAAGACCGAT+GGG | + | chr2.3:62860675-62860694 | MS.gene048232:CDS | 40.0% |
| ! | GCTCAAGCATTTTCACTATC+CGG | - | chr2.3:62858713-62858732 | None:intergenic | 40.0% |
| ! | GGCAATTTTGCTAGAAAGCA+TGG | + | chr2.3:62858345-62858364 | MS.gene048232:CDS | 40.0% |
| ! | TGCGTCTTTTACCTGCTTAT+CGG | + | chr2.3:62858625-62858644 | MS.gene048232:CDS | 40.0% |
| ! | TGTGCATAATCACGAGCTTT+TGG | + | chr2.3:62858590-62858609 | MS.gene048232:CDS | 40.0% |
| !! | GTGGAATAAGGCATTGAATG+TGG | - | chr2.3:62859430-62859449 | None:intergenic | 40.0% |
| !! | TGCAAAGCATCGAAAGCATA+AGG | - | chr2.3:62860227-62860246 | None:intergenic | 40.0% |
| !! | TTATCTGCTTTCACCGATTC+TGG | - | chr2.3:62858246-62858265 | None:intergenic | 40.0% |
| !!! | AGTTGGTTTTGTCTTCCTCT+TGG | + | chr2.3:62859381-62859400 | MS.gene048232:CDS | 40.0% |
| !!! | ATGGATTCCTTTTTGGAGTG+TGG | + | chr2.3:62859042-62859061 | MS.gene048232:CDS | 40.0% |
| !!! | GTTGGTTTTGTCTTCCTCTT+GGG | + | chr2.3:62859382-62859401 | MS.gene048232:CDS | 40.0% |
| !!! | TTCCTTTTTGGAGTGTGGTT+TGG | + | chr2.3:62859047-62859066 | MS.gene048232:CDS | 40.0% |
| ATTCTATCTGACCTTGACCC+CGG | + | chr2.3:62859279-62859298 | MS.gene048232:CDS | 45.0% | |
| ATTTGCCTTCCTCTTAACCG+GGG | - | chr2.3:62858457-62858476 | None:intergenic | 45.0% | |
| CAATGTGGACAACACCAAAG+TGG | - | chr2.3:62859881-62859900 | None:intergenic | 45.0% | |
| CATTTGCCTTCCTCTTAACC+GGG | - | chr2.3:62858458-62858477 | None:intergenic | 45.0% | |
| CCATTTGCCTTCCTCTTAAC+CGG | - | chr2.3:62858459-62858478 | None:intergenic | 45.0% | |
| CCGAGAACGATCTTTAAACG+TGG | + | chr2.3:62860490-62860509 | MS.gene048232:CDS | 45.0% | |
| CGCTTGTAAACGCCTAATTG+AGG | - | chr2.3:62858405-62858424 | None:intergenic | 45.0% | |
| CGGAAACAACAATGTCCTTG+TGG | + | chr2.3:62858162-62858181 | MS.gene048232:CDS | 45.0% | |
| CGGTTAAGAGGAAGGCAAAT+GGG | + | chr2.3:62858457-62858476 | MS.gene048232:CDS | 45.0% | |
| CGTGTTATGGCTACCAGAAA+AGG | + | chr2.3:62860343-62860362 | MS.gene048232:CDS | 45.0% | |
| CTGTCTAAGGAGGTTGTTGA+CGG | + | chr2.3:62858534-62858553 | MS.gene048232:CDS | 45.0% | |
| CTTTCTTGGAAAGGGATGTG+AGG | + | chr2.3:62858763-62858782 | MS.gene048232:CDS | 45.0% | |
| GAGGGTGATGATTCTGATGA+AGG | + | chr2.3:62858210-62858229 | MS.gene048232:CDS | 45.0% | |
| GATAGGAAATCAGTGAGGTG+TGG | + | chr2.3:62858492-62858511 | MS.gene048232:CDS | 45.0% | |
| GGAATGACGTGTTTAGTCTC+AGG | - | chr2.3:62859333-62859352 | None:intergenic | 45.0% | |
| GGTTAAGAGGAAGGCAAATG+GGG | + | chr2.3:62858458-62858477 | MS.gene048232:CDS | 45.0% | |
| GTCATCATCTGCTTCTTTCG+TGG | - | chr2.3:62858889-62858908 | None:intergenic | 45.0% | |
| GTGTTTCTCCGGTTCATGAA+AGG | + | chr2.3:62859240-62859259 | MS.gene048232:CDS | 45.0% | |
| TGGAGTTTGCAGCATGAATG+TGG | + | chr2.3:62860709-62860728 | MS.gene048232:CDS | 45.0% | |
| TGTCTAAGGAGGTTGTTGAC+GGG | + | chr2.3:62858535-62858554 | MS.gene048232:CDS | 45.0% | |
| ! | TACCAATTGAAGAGCATGCG+CGG | + | chr2.3:62860189-62860208 | MS.gene048232:CDS | 45.0% |
| !! | ATGGGGAGCATCATAGAGAT+AGG | + | chr2.3:62858475-62858494 | MS.gene048232:CDS | 45.0% |
| AGGTTCTGCAGCACCAGAAT+CGG | + | chr2.3:62858230-62858249 | MS.gene048232:CDS | 50.0% | |
| ATGGAGAGCGACACGTGTTA+TGG | + | chr2.3:62860330-62860349 | MS.gene048232:CDS | 50.0% | |
| CATCTTTAAGTCCGGGGTCA+AGG | - | chr2.3:62859293-62859312 | None:intergenic | 50.0% | |
| CCGGTTAAGAGGAAGGCAAA+TGG | + | chr2.3:62858456-62858475 | MS.gene048232:CDS | 50.0% | |
| CGATGCTTTGCAGCAAGAGT+TGG | + | chr2.3:62860235-62860254 | MS.gene048232:CDS | 50.0% | |
| CTAAACACGTCATTCCGGTG+TGG | + | chr2.3:62859337-62859356 | MS.gene048232:CDS | 50.0% | |
| GCTTTCGAAAGCTGGGTTTC+CGG | + | chr2.3:62858683-62858702 | MS.gene048232:CDS | 50.0% | |
| GTCTAAGGAGGTTGTTGACG+GGG | + | chr2.3:62858536-62858555 | MS.gene048232:CDS | 50.0% | |
| GTGGACAACACCAAAGTGGT+TGG | - | chr2.3:62859877-62859896 | None:intergenic | 50.0% | |
| TTATCGATCTGGGTTTGCCC+CGG | + | chr2.3:62858437-62858456 | MS.gene048232:CDS | 50.0% | |
| TTGTTGACGGGGTTTCACAG+TGG | + | chr2.3:62858547-62858566 | MS.gene048232:CDS | 50.0% | |
| !! | CTTGGTGATGCCAACCACTT+TGG | + | chr2.3:62859864-62859883 | MS.gene048232:intron | 50.0% |
| AAGCTGGGTTTCCGGTACAC+CGG | + | chr2.3:62858691-62858710 | MS.gene048232:CDS | 55.0% | |
| CCTCGATGCAGGTGTTTCTC+CGG | + | chr2.3:62859229-62859248 | MS.gene048232:intron | 55.0% | |
| CTCCGCGCATGCTCTTCAAT+TGG | - | chr2.3:62860194-62860213 | None:intergenic | 55.0% | |
| GTTTGCCCCGGTTAAGAGGA+AGG | + | chr2.3:62858449-62858468 | MS.gene048232:CDS | 55.0% | |
| CCGGAGAAACACCTGCATCG+AGG | - | chr2.3:62859232-62859251 | None:intergenic | 60.0% | |
| CTGGGTTTGCCCCGGTTAAG+AGG | + | chr2.3:62858445-62858464 | MS.gene048232:CDS | 60.0% | |
| TCCATCGGTCTCGACCCCAT+CGG | - | chr2.3:62860693-62860712 | None:intergenic | 60.0% | |
| TCGGCATAACGAGGCCCAAG+AGG | - | chr2.3:62859399-62859418 | None:intergenic | 60.0% | |
| ! | TGGGCACCGTCCTATGTGAG+AGG | + | chr2.3:62859555-62859574 | MS.gene048232:CDS | 60.0% |
| ACCGATGGGGTCGAGACCGA+TGG | + | chr2.3:62860689-62860708 | MS.gene048232:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 62858138 | 62860751 | 62858138 | ID=MS.gene048232 |
| chr2.3 | mRNA | 62858138 | 62860751 | 62858138 | ID=MS.gene048232.t1;Parent=MS.gene048232 |
| chr2.3 | exon | 62858138 | 62859154 | 62858138 | ID=MS.gene048232.t1.exon1;Parent=MS.gene048232.t1 |
| chr2.3 | CDS | 62858138 | 62859154 | 62858138 | ID=cds.MS.gene048232.t1;Parent=MS.gene048232.t1 |
| chr2.3 | exon | 62859240 | 62859683 | 62859240 | ID=MS.gene048232.t1.exon2;Parent=MS.gene048232.t1 |
| chr2.3 | CDS | 62859240 | 62859683 | 62859240 | ID=cds.MS.gene048232.t1;Parent=MS.gene048232.t1 |
| chr2.3 | exon | 62860119 | 62860751 | 62860119 | ID=MS.gene048232.t1.exon3;Parent=MS.gene048232.t1 |
| chr2.3 | CDS | 62860119 | 62860751 | 62860119 | ID=cds.MS.gene048232.t1;Parent=MS.gene048232.t1 |
| Gene Sequence |
| Protein sequence |