Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene048239.t1 | XP_024631359.1 | 90.1 | 695 | 31 | 1 | 1 | 657 | 1 | 695 | 0.00E+00 | 1266.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene048239.t1 | Q9LKR4 | 53.4 | 669 | 268 | 4 | 5 | 630 | 8 | 675 | 4.6e-200 | 699.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene048239.t1 | A0A396J3Q9 | 90.1 | 695 | 31 | 1 | 1 | 657 | 1 | 695 | 0.0e+00 | 1266.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene048239.t1 | TF | FAR1 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene048239.t1 | MTR_3g450850 | 44.672 | 244 | 116 | 3 | 52 | 287 | 48 | 280 | 6.51e-62 | 210 |
MS.gene048239.t1 | MTR_4g035820 | 33.721 | 258 | 155 | 5 | 33 | 287 | 58 | 302 | 1.86e-37 | 149 |
MS.gene048239.t1 | MTR_3g012160 | 45.833 | 96 | 42 | 2 | 192 | 287 | 1 | 86 | 1.49e-19 | 84.3 |
MS.gene048239.t1 | MTR_6g014355 | 39.844 | 128 | 68 | 4 | 124 | 249 | 13 | 133 | 4.33e-16 | 79.0 |
MS.gene048239.t1 | MTR_1g070355 | 28.033 | 239 | 143 | 8 | 57 | 287 | 80 | 297 | 1.25e-15 | 80.9 |
MS.gene048239.t1 | MTR_5g076070 | 24.275 | 276 | 185 | 6 | 22 | 287 | 15 | 276 | 3.31e-15 | 77.0 |
MS.gene048239.t1 | MTR_2g101460 | 38.235 | 102 | 60 | 2 | 63 | 163 | 67 | 166 | 1.32e-11 | 65.1 |
MS.gene048239.t1 | MTR_2g101460 | 38.235 | 102 | 60 | 2 | 63 | 163 | 57 | 156 | 1.69e-11 | 64.3 |
MS.gene048239.t1 | MTR_6g022080 | 30.070 | 143 | 89 | 3 | 63 | 200 | 97 | 233 | 2.17e-11 | 65.1 |
MS.gene048239.t1 | MTR_3g095940 | 49.153 | 59 | 30 | 0 | 459 | 517 | 86 | 144 | 4.45e-11 | 62.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene048239.t1 | AT5G28530 | 53.534 | 665 | 269 | 3 | 5 | 630 | 8 | 671 | 0.0 | 719 |
MS.gene048239.t1 | AT5G28530 | 53.534 | 665 | 269 | 3 | 5 | 630 | 8 | 671 | 0.0 | 719 |
MS.gene048239.t1 | AT5G28530 | 53.363 | 669 | 268 | 4 | 5 | 630 | 8 | 675 | 0.0 | 716 |
MS.gene048239.t1 | AT5G28530 | 53.270 | 627 | 266 | 4 | 5 | 630 | 8 | 608 | 0.0 | 675 |
MS.gene048239.t1 | AT5G28530 | 53.090 | 631 | 265 | 5 | 5 | 630 | 8 | 612 | 0.0 | 671 |
MS.gene048239.t1 | AT1G10240 | 39.458 | 664 | 338 | 7 | 27 | 638 | 24 | 675 | 2.03e-165 | 490 |
MS.gene048239.t1 | AT1G10240 | 39.458 | 664 | 338 | 7 | 27 | 638 | 24 | 675 | 2.03e-165 | 490 |
MS.gene048239.t1 | AT4G38180 | 28.547 | 592 | 355 | 15 | 49 | 587 | 71 | 647 | 4.79e-53 | 195 |
MS.gene048239.t1 | AT4G15090 | 25.039 | 643 | 395 | 15 | 49 | 630 | 49 | 665 | 2.51e-47 | 179 |
MS.gene048239.t1 | AT4G15090 | 25.039 | 643 | 395 | 15 | 49 | 630 | 49 | 665 | 2.51e-47 | 179 |
MS.gene048239.t1 | AT4G15090 | 25.039 | 643 | 395 | 15 | 49 | 630 | 49 | 665 | 2.51e-47 | 179 |
MS.gene048239.t1 | AT4G15090 | 25.039 | 643 | 395 | 15 | 49 | 630 | 49 | 665 | 2.51e-47 | 179 |
MS.gene048239.t1 | AT4G15090 | 25.039 | 643 | 395 | 15 | 49 | 630 | 49 | 665 | 2.51e-47 | 179 |
MS.gene048239.t1 | AT2G27110 | 25.464 | 593 | 333 | 20 | 48 | 582 | 46 | 587 | 5.56e-40 | 157 |
MS.gene048239.t1 | AT2G27110 | 25.464 | 593 | 333 | 20 | 48 | 582 | 46 | 587 | 5.56e-40 | 157 |
MS.gene048239.t1 | AT3G06250 | 24.715 | 615 | 326 | 20 | 27 | 572 | 155 | 701 | 5.55e-37 | 148 |
MS.gene048239.t1 | AT3G06250 | 24.715 | 615 | 326 | 20 | 27 | 572 | 155 | 701 | 5.55e-37 | 148 |
MS.gene048239.t1 | AT3G06250 | 24.715 | 615 | 326 | 20 | 27 | 572 | 155 | 701 | 5.55e-37 | 148 |
MS.gene048239.t1 | AT3G22170 | 26.065 | 587 | 379 | 20 | 26 | 573 | 46 | 616 | 8.02e-36 | 144 |
MS.gene048239.t1 | AT3G22170 | 26.065 | 587 | 379 | 20 | 26 | 573 | 46 | 616 | 8.02e-36 | 144 |
MS.gene048239.t1 | AT5G18960 | 25.913 | 575 | 313 | 19 | 51 | 572 | 211 | 725 | 8.81e-35 | 141 |
MS.gene048239.t1 | AT5G18960 | 25.913 | 575 | 313 | 19 | 51 | 572 | 211 | 725 | 8.81e-35 | 141 |
MS.gene048239.t1 | AT1G76320 | 24.769 | 650 | 386 | 24 | 55 | 639 | 1 | 612 | 1.95e-33 | 136 |
MS.gene048239.t1 | AT1G76320 | 24.502 | 653 | 384 | 24 | 55 | 639 | 1 | 612 | 2.58e-33 | 136 |
MS.gene048239.t1 | AT1G76320 | 24.502 | 653 | 384 | 24 | 55 | 639 | 1 | 612 | 3.00e-33 | 136 |
MS.gene048239.t1 | AT1G76320 | 24.502 | 653 | 384 | 24 | 55 | 639 | 1 | 612 | 3.00e-33 | 136 |
MS.gene048239.t1 | AT2G27110 | 26.781 | 407 | 235 | 13 | 232 | 582 | 43 | 442 | 7.55e-33 | 135 |
MS.gene048239.t1 | AT2G32250 | 23.864 | 616 | 416 | 20 | 54 | 645 | 41 | 627 | 4.26e-31 | 130 |
MS.gene048239.t1 | AT2G32250 | 23.864 | 616 | 416 | 20 | 54 | 645 | 41 | 627 | 5.35e-31 | 129 |
MS.gene048239.t1 | AT2G32250 | 23.864 | 616 | 416 | 20 | 54 | 645 | 41 | 627 | 5.35e-31 | 129 |
MS.gene048239.t1 | AT2G32250 | 23.864 | 616 | 416 | 20 | 54 | 645 | 41 | 627 | 5.77e-31 | 129 |
MS.gene048239.t1 | AT2G32250 | 23.864 | 616 | 416 | 20 | 54 | 645 | 41 | 627 | 5.77e-31 | 129 |
MS.gene048239.t1 | AT2G32250 | 23.864 | 616 | 416 | 20 | 54 | 645 | 41 | 627 | 5.77e-31 | 129 |
MS.gene048239.t1 | AT4G19990 | 22.989 | 609 | 346 | 15 | 54 | 592 | 24 | 579 | 8.03e-31 | 129 |
MS.gene048239.t1 | AT4G19990 | 22.989 | 609 | 346 | 15 | 54 | 592 | 24 | 579 | 8.03e-31 | 129 |
MS.gene048239.t1 | AT4G19990 | 22.989 | 609 | 346 | 15 | 54 | 592 | 38 | 593 | 9.01e-31 | 129 |
MS.gene048239.t1 | AT4G19990 | 23.169 | 587 | 331 | 14 | 54 | 573 | 24 | 557 | 1.05e-30 | 129 |
MS.gene048239.t1 | AT4G19990 | 23.169 | 587 | 331 | 14 | 54 | 573 | 24 | 557 | 1.05e-30 | 129 |
MS.gene048239.t1 | AT4G19990 | 22.989 | 609 | 346 | 15 | 54 | 592 | 24 | 579 | 1.23e-30 | 128 |
MS.gene048239.t1 | AT2G32250 | 23.740 | 615 | 416 | 20 | 55 | 645 | 1 | 586 | 2.09e-30 | 127 |
MS.gene048239.t1 | AT2G32250 | 23.740 | 615 | 416 | 20 | 55 | 645 | 1 | 586 | 2.26e-30 | 127 |
MS.gene048239.t1 | AT1G52520 | 22.650 | 649 | 395 | 23 | 50 | 628 | 84 | 695 | 2.26e-27 | 118 |
MS.gene048239.t1 | AT4G19990 | 22.222 | 531 | 307 | 12 | 117 | 592 | 43 | 522 | 6.74e-26 | 113 |
MS.gene048239.t1 | AT4G38170 | 24.566 | 346 | 243 | 7 | 254 | 582 | 62 | 406 | 1.35e-23 | 105 |
MS.gene048239.t1 | AT1G80010 | 22.164 | 379 | 241 | 11 | 275 | 617 | 346 | 706 | 3.62e-19 | 92.4 |
Find 123 sgRNAs with CRISPR-Local
Find 189 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGCCAAATGGTTTCTGATTT+TGG | 0.102866 | 2.3:+62788075 | MS.gene048239:CDS |
CAGAGGAATTTGAACTTAAA+TGG | 0.181226 | 2.3:+62788052 | MS.gene048239:CDS |
TTATCTGCTTTCACCGATTC+TGG | 0.196818 | 2.3:-62786841 | None:intergenic |
AGGTGGACATTTGTCTTTCT+TGG | 0.238238 | 2.3:+62787341 | MS.gene048239:CDS |
AAGCCTTCAAACTAGCTATT+TGG | 0.254902 | 2.3:-62789343 | None:intergenic |
CGTGCATAATCACGAGCTTT+TGG | 0.255977 | 2.3:+62787182 | MS.gene048239:CDS |
CCGGGTTTGCCCCGGTTAAA+AGG | 0.257571 | 2.3:+62787037 | MS.gene048239:CDS |
ACATATTGATTTACTGTATT+CGG | 0.284863 | 2.3:+62788113 | MS.gene048239:CDS |
TGTATTCGGTTCGAGCATAT+TGG | 0.298238 | 2.3:+62788127 | MS.gene048239:CDS |
GAAAAGGGAAAATGATGTTT+TGG | 0.322914 | 2.3:+62787434 | MS.gene048239:CDS |
GCTTTCGAAAGCTGGGTTTC+CGG | 0.342293 | 2.3:+62787275 | MS.gene048239:CDS |
AAATCGGAAGAAGGTTATTC+AGG | 0.354212 | 2.3:+62787389 | MS.gene048239:CDS |
ATACTCTTGCTTTCGAAAGC+TGG | 0.354980 | 2.3:+62787267 | MS.gene048239:CDS |
TTCTTTCATCAGTTCTTTGC+GGG | 0.358476 | 2.3:-62789230 | None:intergenic |
AACAATGTCCTTGTGGAGAT+TGG | 0.358996 | 2.3:+62786767 | MS.gene048239:CDS |
ATTGAATGTGGATTTAAATT+CGG | 0.362006 | 2.3:-62788007 | None:intergenic |
CCTGCTTATCGGAAGATTCA+TGG | 0.362934 | 2.3:+62787228 | MS.gene048239:CDS |
TGCAAGGAATTTGAATCATC+GGG | 0.363156 | 2.3:+62788986 | MS.gene048239:CDS |
GTATTCGGTTCGAGCATATT+GGG | 0.368888 | 2.3:+62788128 | MS.gene048239:CDS |
TCTAGAATTAGCCCTCAATT+AGG | 0.377550 | 2.3:+62786982 | MS.gene048239:CDS |
CTGTCTAAGGAGGTTGTTGA+TGG | 0.401675 | 2.3:+62787126 | MS.gene048239:CDS |
CTCAGGAAATTCGCTTCTAA+TGG | 0.402316 | 2.3:-62787905 | None:intergenic |
GTCATCATCCGCTTCTTTCG+TGG | 0.405180 | 2.3:-62787478 | None:intergenic |
TGAGGAACTTTGTGCAAAAT+CGG | 0.408597 | 2.3:+62787373 | MS.gene048239:CDS |
AGGCATTGCTTAATGAGAAA+AGG | 0.415782 | 2.3:+62787418 | MS.gene048239:CDS |
TTAAACACCATACCAACATA+AGG | 0.421729 | 2.3:-62786886 | None:intergenic |
GAAAATATAGCTTGGTCATA+TGG | 0.423296 | 2.3:+62787540 | MS.gene048239:CDS |
CAATGGCTTCAAAAGACATA+TGG | 0.424757 | 2.3:+62786734 | None:intergenic |
ATGGAGAGCGACACGTGTTA+TGG | 0.427813 | 2.3:+62788933 | MS.gene048239:CDS |
GAAAATGCTTGAGCTTGAAA+AGG | 0.428355 | 2.3:+62787311 | MS.gene048239:CDS |
GTCCAAAATCAGAAACCATT+TGG | 0.428679 | 2.3:-62788077 | None:intergenic |
GACATCTTCCTTTCATGAAC+CGG | 0.429420 | 2.3:-62787840 | None:intergenic |
ATTTCTCAGCAATAAAACTT+TGG | 0.431448 | 2.3:-62789132 | None:intergenic |
TGCTAAAATGTATCTGTCTA+AGG | 0.437024 | 2.3:+62787113 | MS.gene048239:CDS |
ACAAATACTACTTAAGTAGA+TGG | 0.437071 | 2.3:+62789068 | MS.gene048239:CDS |
TACTCTTGCTTTCGAAAGCT+GGG | 0.437822 | 2.3:+62787268 | MS.gene048239:CDS |
TAAACACCATACCAACATAA+GGG | 0.443135 | 2.3:-62786885 | None:intergenic |
GAGCTTGAAAAGGGAATTCA+AGG | 0.444538 | 2.3:+62787321 | MS.gene048239:CDS |
CGATGCTTTGCAGCAAGAGT+TGG | 0.446058 | 2.3:+62788838 | MS.gene048239:CDS |
CTACTTAAGTAGTATTTGTC+GGG | 0.448293 | 2.3:-62789064 | None:intergenic |
CATAAAATCATCTATAGACT+TGG | 0.450457 | 2.3:-62788205 | None:intergenic |
GTAAATAAGAATGTCGTGTT+TGG | 0.451853 | 2.3:+62787570 | MS.gene048239:CDS |
CGTGTTATGGTTACCCGAAA+AGG | 0.454105 | 2.3:+62788946 | MS.gene048239:CDS |
ACATTTGTCTTTCTTGGAAA+GGG | 0.456261 | 2.3:+62787347 | MS.gene048239:CDS |
CTGCTTATCGGAAGATTCAT+GGG | 0.459154 | 2.3:+62787229 | MS.gene048239:CDS |
CAATATACAAATCTTAGAAC+TGG | 0.459994 | 2.3:+62788767 | MS.gene048239:CDS |
CTCCGCGCATGCTCTTCAAT+TGG | 0.460247 | 2.3:-62788794 | None:intergenic |
AACCTTCTCATTCTCATCCA+TGG | 0.461287 | 2.3:-62787517 | None:intergenic |
GTTCTTTCATCAGTTCTTTG+CGG | 0.462201 | 2.3:-62789231 | None:intergenic |
GCACGTTTAAAGAACGTTCT+CGG | 0.462770 | 2.3:-62789093 | None:intergenic |
CATTACCCCTTATGTTGGTA+TGG | 0.464681 | 2.3:+62786879 | MS.gene048239:CDS |
TTCTAAACAAGGTATCTAGT+TGG | 0.469074 | 2.3:+62787956 | MS.gene048239:CDS |
TCTAATGGCATCTCTAAGCC+CGG | 0.474391 | 2.3:-62787890 | None:intergenic |
CTTCAAAAGACATATGGATT+CGG | 0.475077 | 2.3:+62786740 | MS.gene048239:CDS |
GGCATTGCTTAATGAGAAAA+GGG | 0.476407 | 2.3:+62787419 | MS.gene048239:CDS |
CCTCAATGCAGGTGTTTCTC+CGG | 0.477355 | 2.3:+62787821 | MS.gene048239:intron |
TTATCGATCCGGGTTTGCCC+CGG | 0.478798 | 2.3:+62787029 | MS.gene048239:CDS |
AGGTTCTGCAGCACCAGAAT+CGG | 0.478841 | 2.3:+62786828 | MS.gene048239:CDS |
TCTACTTAAGTAGTATTTGT+CGG | 0.487675 | 2.3:-62789065 | None:intergenic |
GACATTTGTCTTTCTTGGAA+AGG | 0.490686 | 2.3:+62787346 | MS.gene048239:CDS |
TGTCTAAGGAGGTTGTTGAT+GGG | 0.492447 | 2.3:+62787127 | MS.gene048239:CDS |
TGAGACTAAACACGTCATTC+CGG | 0.497303 | 2.3:+62787924 | MS.gene048239:CDS |
TCTAGATCTTGCTTTCCTCA+TGG | 0.497710 | 2.3:-62786965 | None:intergenic |
CCATGAATCTTCCGATAAGC+AGG | 0.498068 | 2.3:-62787228 | None:intergenic |
TTGCAAGGAATTTGAATCAT+CGG | 0.500581 | 2.3:+62788985 | MS.gene048239:CDS |
GTCTAAGGAGGTTGTTGATG+GGG | 0.501192 | 2.3:+62787128 | MS.gene048239:CDS |
TGAACTTAAATGGAGCCAAA+TGG | 0.503893 | 2.3:+62788062 | MS.gene048239:CDS |
AAAATGCTTGAGCTTGAAAA+GGG | 0.510249 | 2.3:+62787312 | MS.gene048239:CDS |
TGCAAAGCATCGAAAGCATA+AGG | 0.512230 | 2.3:-62788827 | None:intergenic |
CTTTGTGCAAAATCGGAAGA+AGG | 0.512580 | 2.3:+62787380 | MS.gene048239:CDS |
CGCTTGTAAACTCCTAATTG+AGG | 0.518417 | 2.3:-62786994 | None:intergenic |
AATCATCGGGAATATTATGC+AGG | 0.520423 | 2.3:+62788999 | MS.gene048239:CDS |
ATTCTATCCGACCTTGACCC+CGG | 0.522812 | 2.3:+62787871 | MS.gene048239:CDS |
AGAACGTTCTTTAAACGTGC+AGG | 0.526916 | 2.3:+62789096 | MS.gene048239:CDS |
GGAATGACGTGTTTAGTCTC+AGG | 0.531762 | 2.3:-62787922 | None:intergenic |
GATATCATTACCCCTTATGT+TGG | 0.532776 | 2.3:+62786874 | MS.gene048239:CDS |
TGAGTCTCCTTATGTGATTG+AGG | 0.532886 | 2.3:-62788746 | None:intergenic |
CATCTCTAAGCCCGGGGTCA+AGG | 0.533854 | 2.3:-62787882 | None:intergenic |
CTAATGGCATCTCTAAGCCC+GGG | 0.534705 | 2.3:-62787889 | None:intergenic |
CCGGTTAAAAGGAAGGCAAA+TGG | 0.534941 | 2.3:+62787048 | MS.gene048239:CDS |
TTCTATCCGACCTTGACCCC+GGG | 0.539186 | 2.3:+62787872 | MS.gene048239:CDS |
TTCAGAATCATCAATTACAA+AGG | 0.545164 | 2.3:+62789192 | MS.gene048239:CDS |
GTGTTTCTCCGGTTCATGAA+AGG | 0.545182 | 2.3:+62787832 | MS.gene048239:CDS |
GCTACATCTGAGTTGTATAA+CGG | 0.546136 | 2.3:+62788878 | MS.gene048239:CDS |
GCTTGTAAACTCCTAATTGA+GGG | 0.547421 | 2.3:-62786993 | None:intergenic |
GATAGGAAATCAGTGAGGTG+TGG | 0.551495 | 2.3:+62787084 | MS.gene048239:CDS |
ATGGTGAGCATCATAGAGAT+AGG | 0.555117 | 2.3:+62787067 | MS.gene048239:CDS |
GAGATATGTCTAAGACCGAT+GGG | 0.555361 | 2.3:+62789278 | MS.gene048239:CDS |
AGAAGGTTGAAAATATAGCT+TGG | 0.556814 | 2.3:+62787532 | MS.gene048239:CDS |
ACCGATGGGGTCGAGACTGA+TGG | 0.560978 | 2.3:+62789292 | MS.gene048239:CDS |
AGGTCGGATAGAATTGTTTG+CGG | 0.561878 | 2.3:-62787862 | None:intergenic |
AGAGATATGTCTAAGACCGA+TGG | 0.562467 | 2.3:+62789277 | MS.gene048239:CDS |
GAAGGTTATTCAGGAGAATG+AGG | 0.565443 | 2.3:+62787398 | MS.gene048239:CDS |
GAGAGTGATGATTCTGATGA+AGG | 0.572548 | 2.3:+62786808 | MS.gene048239:CDS |
GTTTGCCCCGGTTAAAAGGA+AGG | 0.573380 | 2.3:+62787041 | MS.gene048239:CDS |
ACAAATACTCTGCTCTTGCA+AGG | 0.578215 | 2.3:+62788970 | MS.gene048239:CDS |
TACCATGGATGAGAATGAGA+AGG | 0.581496 | 2.3:+62787515 | MS.gene048239:CDS |
CTTTCTTGGAAAGGGATGTG+AGG | 0.596394 | 2.3:+62787355 | MS.gene048239:CDS |
TCTAAGCCCGGGGTCAAGGT+CGG | 0.599710 | 2.3:-62787878 | None:intergenic |
TACCAATTGAAGAGCATGCG+CGG | 0.607691 | 2.3:+62788792 | MS.gene048239:CDS |
TTGTTGATGGGGTTTCGCAG+TGG | 0.611831 | 2.3:+62787139 | MS.gene048239:CDS |
GATTTAAATTCGGCATAACG+AGG | 0.612578 | 2.3:-62787997 | None:intergenic |
AAACACCATACCAACATAAG+GGG | 0.620023 | 2.3:-62786884 | None:intergenic |
CGGAAACAACAATGTCCTTG+TGG | 0.620981 | 2.3:+62786760 | MS.gene048239:CDS |
AAGCTGGGTTTCCGGTACAC+CGG | 0.621789 | 2.3:+62787283 | MS.gene048239:CDS |
TCCATCAGTCTCGACCCCAT+CGG | 0.622308 | 2.3:-62789293 | None:intergenic |
TCGGCATAACGAGGCCCAAG+AGG | 0.630511 | 2.3:-62787988 | None:intergenic |
GTGGAATAAGGCATTGAATG+TGG | 0.639736 | 2.3:-62788019 | None:intergenic |
GTGCAAAGCCACGAAAGAAG+CGG | 0.646908 | 2.3:+62787470 | MS.gene048239:CDS |
TAAAATGTATCTGTCTAAGG+AGG | 0.650992 | 2.3:+62787116 | MS.gene048239:CDS |
TGGGCACTGTCCTATGTGAG+AGG | 0.658043 | 2.3:+62788147 | MS.gene048239:CDS |
TTGTTTAGAATATTCCACAC+CGG | 0.665129 | 2.3:-62787943 | None:intergenic |
TGGAGTCTGCAGCATGAATG+TGG | 0.667001 | 2.3:+62789312 | MS.gene048239:CDS |
TAATGGCATCTCTAAGCCCG+GGG | 0.670337 | 2.3:-62787888 | None:intergenic |
GGTGTGGAATATTCTAAACA+AGG | 0.670977 | 2.3:+62787945 | MS.gene048239:CDS |
TGCTTATCGGAAGATTCATG+GGG | 0.674518 | 2.3:+62787230 | MS.gene048239:CDS |
TAAGGGGTAATGATATCAGA+CGG | 0.682842 | 2.3:-62786868 | None:intergenic |
CTTGAAAAGGGAATTCAAGG+TGG | 0.689739 | 2.3:+62787324 | MS.gene048239:CDS |
TAACATTTCCAATCTCCACA+AGG | 0.699078 | 2.3:-62786775 | None:intergenic |
CTAAACACGTCATTCCGGTG+TGG | 0.723440 | 2.3:+62787929 | MS.gene048239:CDS |
ACTTACTAGAATTCTTAACG+AGG | 0.726931 | 2.3:+62789252 | MS.gene048239:CDS |
AGATATGTCTAAGACCGATG+GGG | 0.747503 | 2.3:+62789279 | MS.gene048239:CDS |
ATAGAGATAGGAAATCAGTG+AGG | 0.812534 | 2.3:+62787079 | MS.gene048239:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | CTTTAAAATTTTATTTTTAG+TGG | + | chr2.3:62788562-62788581 | MS.gene048239:intron | 10.0% |
!! | ATAATTTATTAGAATGCATT+GGG | - | chr2.3:62788428-62788447 | None:intergenic | 15.0% |
!! | TAATTCACAATTCATAAAAT+AGG | + | chr2.3:62788614-62788633 | MS.gene048239:intron | 15.0% |
!! | ATTGAATGTGGATTTAAATT+CGG | - | chr2.3:62788010-62788029 | None:intergenic | 20.0% |
!! | CATAATTTATTAGAATGCAT+TGG | - | chr2.3:62788429-62788448 | None:intergenic | 20.0% |
!! | TTTAGTGGTATTATATCTTA+CGG | + | chr2.3:62788577-62788596 | MS.gene048239:intron | 20.0% |
!!! | ACATATTGATTTACTGTATT+CGG | + | chr2.3:62788113-62788132 | MS.gene048239:CDS | 20.0% |
!!! | TGAAAATAAATTTTCAGCTT+GGG | - | chr2.3:62789176-62789195 | None:intergenic | 20.0% |
! | AAAAGATTGACTATACAATG+TGG | - | chr2.3:62788495-62788514 | None:intergenic | 25.0% |
! | ACAAATACTACTTAAGTAGA+TGG | + | chr2.3:62789068-62789087 | MS.gene048239:CDS | 25.0% |
! | ATAGAAATATCATAAGAGCA+TGG | - | chr2.3:62788674-62788693 | None:intergenic | 25.0% |
! | ATTTCTCAGCAATAAAACTT+TGG | - | chr2.3:62789135-62789154 | None:intergenic | 25.0% |
! | CAATATACAAATCTTAGAAC+TGG | + | chr2.3:62788767-62788786 | MS.gene048239:CDS | 25.0% |
! | CATAAAATCATCTATAGACT+TGG | - | chr2.3:62788208-62788227 | None:intergenic | 25.0% |
! | CATAAGAGGAATATTTATGA+AGG | - | chr2.3:62787792-62787811 | None:intergenic | 25.0% |
! | TAAAACACAACCGAAAAAAA+TGG | - | chr2.3:62787685-62787704 | None:intergenic | 25.0% |
! | TCTACTTAAGTAGTATTTGT+CGG | - | chr2.3:62789068-62789087 | None:intergenic | 25.0% |
! | TTCAGAATCATCAATTACAA+AGG | + | chr2.3:62789192-62789211 | MS.gene048239:CDS | 25.0% |
!! | CTGAAAATAAATTTTCAGCT+TGG | - | chr2.3:62789177-62789196 | None:intergenic | 25.0% |
!! | TTTTTATCCTCAATCACATA+AGG | + | chr2.3:62788739-62788758 | MS.gene048239:CDS | 25.0% |
!!! | AAAGTTTTATTGCTGAGAAA+TGG | + | chr2.3:62789134-62789153 | MS.gene048239:CDS | 25.0% |
!!! | CTTTGTTTATGATTTTACCA+TGG | + | chr2.3:62787500-62787519 | MS.gene048239:CDS | 25.0% |
!!! | TCTTTGTTTTGTATGGTTTT+CGG | + | chr2.3:62788324-62788343 | MS.gene048239:intron | 25.0% |
AAAATGCTTGAGCTTGAAAA+GGG | + | chr2.3:62787312-62787331 | MS.gene048239:CDS | 30.0% | |
ACATTTGTCTTTCTTGGAAA+GGG | + | chr2.3:62787347-62787366 | MS.gene048239:CDS | 30.0% | |
ACTTACTAGAATTCTTAACG+AGG | + | chr2.3:62789252-62789271 | MS.gene048239:CDS | 30.0% | |
AGAAGGTTGAAAATATAGCT+TGG | + | chr2.3:62787532-62787551 | MS.gene048239:CDS | 30.0% | |
ATCAAGTTCCAAATCTGAAA+TGG | - | chr2.3:62788644-62788663 | None:intergenic | 30.0% | |
CAAAAAATAACCTCTCACAT+AGG | - | chr2.3:62788160-62788179 | None:intergenic | 30.0% | |
CAGAGGAATTTGAACTTAAA+TGG | + | chr2.3:62788052-62788071 | MS.gene048239:CDS | 30.0% | |
CTACTTAAGTAGTATTTGTC+GGG | - | chr2.3:62789067-62789086 | None:intergenic | 30.0% | |
CTTCAAAAGACATATGGATT+CGG | + | chr2.3:62786740-62786759 | MS.gene048239:CDS | 30.0% | |
GAAAATATAGCTTGGTCATA+TGG | + | chr2.3:62787540-62787559 | MS.gene048239:CDS | 30.0% | |
GTAAATAAGAATGTCGTGTT+TGG | + | chr2.3:62787570-62787589 | MS.gene048239:CDS | 30.0% | |
TAAAATGTATCTGTCTAAGG+AGG | + | chr2.3:62787116-62787135 | MS.gene048239:CDS | 30.0% | |
TAAACACCATACCAACATAA+GGG | - | chr2.3:62786888-62786907 | None:intergenic | 30.0% | |
TATACGACACTTCAAAAAGT+TGG | + | chr2.3:62788910-62788929 | MS.gene048239:CDS | 30.0% | |
TGAGGAATAATCATCATAAG+AGG | - | chr2.3:62787806-62787825 | None:intergenic | 30.0% | |
TGCTAAAATGTATCTGTCTA+AGG | + | chr2.3:62787113-62787132 | MS.gene048239:CDS | 30.0% | |
TTAAACACCATACCAACATA+AGG | - | chr2.3:62786889-62786908 | None:intergenic | 30.0% | |
TTGCAAGGAATTTGAATCAT+CGG | + | chr2.3:62788985-62789004 | MS.gene048239:CDS | 30.0% | |
! | GAAAAGGGAAAATGATGTTT+TGG | + | chr2.3:62787434-62787453 | MS.gene048239:CDS | 30.0% |
! | TCTTATCGATTGATCACTTA+TGG | + | chr2.3:62787615-62787634 | MS.gene048239:intron | 30.0% |
! | TTCTAAACAAGGTATCTAGT+TGG | + | chr2.3:62787956-62787975 | MS.gene048239:CDS | 30.0% |
! | TTGTTTAGAATATTCCACAC+CGG | - | chr2.3:62787946-62787965 | None:intergenic | 30.0% |
!! | AAACACCACAATCTTTTTCA+TGG | + | chr2.3:62787715-62787734 | MS.gene048239:CDS | 30.0% |
!! | AACACCACAATCTTTTTCAT+GGG | + | chr2.3:62787716-62787735 | MS.gene048239:CDS | 30.0% |
!! | ATCACTTATGGATTGCTTTT+TGG | + | chr2.3:62787627-62787646 | MS.gene048239:intron | 30.0% |
!!! | ATTTTGTTTGTTATCGATCC+GGG | + | chr2.3:62787019-62787038 | MS.gene048239:CDS | 30.0% |
!!! | CTATGTGAGAGGTTATTTTT+TGG | + | chr2.3:62788158-62788177 | MS.gene048239:CDS | 30.0% |
!!! | GATTTTGTTTGTTATCGATC+CGG | + | chr2.3:62787018-62787037 | MS.gene048239:CDS | 30.0% |
!!! | TGTGGTAGAACCATTTTTTT+CGG | + | chr2.3:62787672-62787691 | MS.gene048239:intron | 30.0% |
!!! | TGTTTTTTCGATGTGGAATA+AGG | - | chr2.3:62788034-62788053 | None:intergenic | 30.0% |
AAACACCATACCAACATAAG+GGG | - | chr2.3:62786887-62786906 | None:intergenic | 35.0% | |
AAATCGGAAGAAGGTTATTC+AGG | + | chr2.3:62787389-62787408 | MS.gene048239:CDS | 35.0% | |
AATCATCGGGAATATTATGC+AGG | + | chr2.3:62788999-62789018 | MS.gene048239:CDS | 35.0% | |
AATGCCCATGAAAAAGATTG+TGG | - | chr2.3:62787723-62787742 | None:intergenic | 35.0% | |
ATAGAGATAGGAAATCAGTG+AGG | + | chr2.3:62787079-62787098 | MS.gene048239:CDS | 35.0% | |
ATTCCACATCGAAAAAACAG+AGG | + | chr2.3:62788035-62788054 | MS.gene048239:CDS | 35.0% | |
CAAAACAAAGAGCAAGCATA+TGG | - | chr2.3:62788315-62788334 | None:intergenic | 35.0% | |
GAAAATGCTTGAGCTTGAAA+AGG | + | chr2.3:62787311-62787330 | MS.gene048239:CDS | 35.0% | |
GACATTTGTCTTTCTTGGAA+AGG | + | chr2.3:62787346-62787365 | MS.gene048239:CDS | 35.0% | |
GATATCATTACCCCTTATGT+TGG | + | chr2.3:62786874-62786893 | MS.gene048239:CDS | 35.0% | |
GATTTAAATTCGGCATAACG+AGG | - | chr2.3:62788000-62788019 | None:intergenic | 35.0% | |
GCTACATCTGAGTTGTATAA+CGG | + | chr2.3:62788878-62788897 | MS.gene048239:CDS | 35.0% | |
GCTTGTAAACTCCTAATTGA+GGG | - | chr2.3:62786996-62787015 | None:intergenic | 35.0% | |
GGCATTGCTTAATGAGAAAA+GGG | + | chr2.3:62787419-62787438 | MS.gene048239:CDS | 35.0% | |
GGTGTGGAATATTCTAAACA+AGG | + | chr2.3:62787945-62787964 | MS.gene048239:CDS | 35.0% | |
GTCCAAAATCAGAAACCATT+TGG | - | chr2.3:62788080-62788099 | None:intergenic | 35.0% | |
GTTCTTTCATCAGTTCTTTG+CGG | - | chr2.3:62789234-62789253 | None:intergenic | 35.0% | |
TAACATTTCCAATCTCCACA+AGG | - | chr2.3:62786778-62786797 | None:intergenic | 35.0% | |
TAAGGGGTAATGATATCAGA+CGG | - | chr2.3:62786871-62786890 | None:intergenic | 35.0% | |
TACAACAGTATCCATGAGAA+GGG | - | chr2.3:62788701-62788720 | None:intergenic | 35.0% | |
TAGGTACTCCATTTCAGATT+TGG | + | chr2.3:62788633-62788652 | MS.gene048239:intron | 35.0% | |
TGAACTTAAATGGAGCCAAA+TGG | + | chr2.3:62788062-62788081 | MS.gene048239:CDS | 35.0% | |
TGAGGAACTTTGTGCAAAAT+CGG | + | chr2.3:62787373-62787392 | MS.gene048239:CDS | 35.0% | |
TGATGATTATTCCTCAATGC+AGG | + | chr2.3:62787810-62787829 | MS.gene048239:intron | 35.0% | |
TGCAAGGAATTTGAATCATC+GGG | + | chr2.3:62788986-62789005 | MS.gene048239:CDS | 35.0% | |
TTCTTTCATCAGTTCTTTGC+GGG | - | chr2.3:62789233-62789252 | None:intergenic | 35.0% | |
! | AGCCAAATGGTTTCTGATTT+TGG | + | chr2.3:62788075-62788094 | MS.gene048239:CDS | 35.0% |
! | AGGCATTGCTTAATGAGAAA+AGG | + | chr2.3:62787418-62787437 | MS.gene048239:CDS | 35.0% |
! | ATGGTTTCTGATTTTGGACT+TGG | + | chr2.3:62788081-62788100 | MS.gene048239:CDS | 35.0% |
! | GATGAAGCTTTTGAGCATTA+TGG | + | chr2.3:62786916-62786935 | MS.gene048239:CDS | 35.0% |
! | TCTAGAATTAGCCCTCAATT+AGG | + | chr2.3:62786982-62787001 | MS.gene048239:CDS | 35.0% |
! | TTTCTATTTCTCCCTTCTCA+TGG | + | chr2.3:62788687-62788706 | MS.gene048239:intron | 35.0% |
!! | ATCTTTTTCATGGGCATTAC+AGG | + | chr2.3:62787725-62787744 | MS.gene048239:CDS | 35.0% |
!! | CAGAGTATTTGTTCCTTTTC+GGG | - | chr2.3:62788962-62788981 | None:intergenic | 35.0% |
!! | GCAGAGTATTTGTTCCTTTT+CGG | - | chr2.3:62788963-62788982 | None:intergenic | 35.0% |
!! | TGGTTTGGTATCAATAGTTG+TGG | + | chr2.3:62787654-62787673 | MS.gene048239:intron | 35.0% |
!! | TTTCGGTTGTGTTTTATTGC+AGG | + | chr2.3:62787689-62787708 | MS.gene048239:intron | 35.0% |
!!! | ATTCCTCTGTTTTTTCGATG+TGG | - | chr2.3:62788041-62788060 | None:intergenic | 35.0% |
!!! | GCTTTTTTGAACAGGTATGT+TGG | + | chr2.3:62788262-62788281 | MS.gene048239:intron | 35.0% |
!!! | TGATGTTTTGGAACTTCTTG+AGG | + | chr2.3:62787446-62787465 | MS.gene048239:CDS | 35.0% |
!!! | TGCTTGCTCTTTGTTTTGTA+TGG | + | chr2.3:62788317-62788336 | MS.gene048239:intron | 35.0% |
!!! | TTTGCGTAGCTTTTTTGAAC+AGG | + | chr2.3:62788254-62788273 | MS.gene048239:CDS | 35.0% |
AACAATGTCCTTGTGGAGAT+TGG | + | chr2.3:62786767-62786786 | MS.gene048239:CDS | 40.0% | |
AACCTTCTCATTCTCATCCA+TGG | - | chr2.3:62787520-62787539 | None:intergenic | 40.0% | |
ACAAATACTCTGCTCTTGCA+AGG | + | chr2.3:62788970-62788989 | MS.gene048239:CDS | 40.0% | |
AGAACGTTCTTTAAACGTGC+AGG | + | chr2.3:62789096-62789115 | MS.gene048239:CDS | 40.0% | |
AGGTCGGATAGAATTGTTTG+CGG | - | chr2.3:62787865-62787884 | None:intergenic | 40.0% | |
AGGTGGACATTTGTCTTTCT+TGG | + | chr2.3:62787341-62787360 | MS.gene048239:CDS | 40.0% | |
ATACTCTTGCTTTCGAAAGC+TGG | + | chr2.3:62787267-62787286 | MS.gene048239:CDS | 40.0% | |
ATGGTGAGCATCATAGAGAT+AGG | + | chr2.3:62787067-62787086 | MS.gene048239:CDS | 40.0% | |
CAATGTGGACAACACAAAAG+TGG | - | chr2.3:62788480-62788499 | None:intergenic | 40.0% | |
CATTACCCCTTATGTTGGTA+TGG | + | chr2.3:62786879-62786898 | MS.gene048239:CDS | 40.0% | |
CGACACTTCAAAAAGTTGGA+TGG | + | chr2.3:62788914-62788933 | MS.gene048239:CDS | 40.0% | |
CGCTTGTAAACTCCTAATTG+AGG | - | chr2.3:62786997-62787016 | None:intergenic | 40.0% | |
CTACAACAGTATCCATGAGA+AGG | - | chr2.3:62788702-62788721 | None:intergenic | 40.0% | |
CTCAGGAAATTCGCTTCTAA+TGG | - | chr2.3:62787908-62787927 | None:intergenic | 40.0% | |
CTGCTTATCGGAAGATTCAT+GGG | + | chr2.3:62787229-62787248 | MS.gene048239:CDS | 40.0% | |
CTTCTCATGGATACTGTTGT+AGG | + | chr2.3:62788700-62788719 | MS.gene048239:intron | 40.0% | |
CTTGAAAAGGGAATTCAAGG+TGG | + | chr2.3:62787324-62787343 | MS.gene048239:CDS | 40.0% | |
CTTTGTGCAAAATCGGAAGA+AGG | + | chr2.3:62787380-62787399 | MS.gene048239:CDS | 40.0% | |
GAAGGTTATTCAGGAGAATG+AGG | + | chr2.3:62787398-62787417 | MS.gene048239:CDS | 40.0% | |
GACATCTTCCTTTCATGAAC+CGG | - | chr2.3:62787843-62787862 | None:intergenic | 40.0% | |
GAGAGTGATGATTCTGATGA+AGG | + | chr2.3:62786808-62786827 | MS.gene048239:CDS | 40.0% | |
GAGCTTGAAAAGGGAATTCA+AGG | + | chr2.3:62787321-62787340 | MS.gene048239:CDS | 40.0% | |
GCACGTTTAAAGAACGTTCT+CGG | - | chr2.3:62789096-62789115 | None:intergenic | 40.0% | |
TACCATGGATGAGAATGAGA+AGG | + | chr2.3:62787515-62787534 | MS.gene048239:CDS | 40.0% | |
TACTCTTGCTTTCGAAAGCT+GGG | + | chr2.3:62787268-62787287 | MS.gene048239:CDS | 40.0% | |
TCATGGATACTGTTGTAGGT+TGG | + | chr2.3:62788704-62788723 | MS.gene048239:intron | 40.0% | |
TCTAGATCTTGCTTTCCTCA+TGG | - | chr2.3:62786968-62786987 | None:intergenic | 40.0% | |
TGAGACTAAACACGTCATTC+CGG | + | chr2.3:62787924-62787943 | MS.gene048239:CDS | 40.0% | |
TGAGTCTCCTTATGTGATTG+AGG | - | chr2.3:62788749-62788768 | None:intergenic | 40.0% | |
TGCTTATCGGAAGATTCATG+GGG | + | chr2.3:62787230-62787249 | MS.gene048239:CDS | 40.0% | |
TGTCTAAGGAGGTTGTTGAT+GGG | + | chr2.3:62787127-62787146 | MS.gene048239:CDS | 40.0% | |
TTGGCGTCACTAAGTTTAAG+TGG | - | chr2.3:62788457-62788476 | None:intergenic | 40.0% | |
! | AGAGATATGTCTAAGACCGA+TGG | + | chr2.3:62789277-62789296 | MS.gene048239:CDS | 40.0% |
! | AGATATGTCTAAGACCGATG+GGG | + | chr2.3:62789279-62789298 | MS.gene048239:CDS | 40.0% |
! | ATTTGCCTTCCTTTTAACCG+GGG | - | chr2.3:62787049-62787068 | None:intergenic | 40.0% |
! | ATTTTCACTATCCGGTGTAC+CGG | - | chr2.3:62787297-62787316 | None:intergenic | 40.0% |
! | CATTTGCCTTCCTTTTAACC+GGG | - | chr2.3:62787050-62787069 | None:intergenic | 40.0% |
! | CCATTTGCCTTCCTTTTAAC+CGG | - | chr2.3:62787051-62787070 | None:intergenic | 40.0% |
! | GAGATATGTCTAAGACCGAT+GGG | + | chr2.3:62789278-62789297 | MS.gene048239:CDS | 40.0% |
! | GCTCAAGCATTTTCACTATC+CGG | - | chr2.3:62787305-62787324 | None:intergenic | 40.0% |
! | GGCAATTTTGCTAGAAAGCA+TGG | + | chr2.3:62786937-62786956 | MS.gene048239:CDS | 40.0% |
! | GTATTCGGTTCGAGCATATT+GGG | + | chr2.3:62788128-62788147 | MS.gene048239:CDS | 40.0% |
! | TGCGTCTTTTACCTGCTTAT+CGG | + | chr2.3:62787217-62787236 | MS.gene048239:CDS | 40.0% |
! | TGTATTCGGTTCGAGCATAT+TGG | + | chr2.3:62788127-62788146 | MS.gene048239:CDS | 40.0% |
!! | GAAAGCATGGATTTTCCATG+AGG | + | chr2.3:62786950-62786969 | MS.gene048239:CDS | 40.0% |
!! | GTGGAATAAGGCATTGAATG+TGG | - | chr2.3:62788022-62788041 | None:intergenic | 40.0% |
!! | TGCAAAGCATCGAAAGCATA+AGG | - | chr2.3:62788830-62788849 | None:intergenic | 40.0% |
!! | TTATCTGCTTTCACCGATTC+TGG | - | chr2.3:62786844-62786863 | None:intergenic | 40.0% |
!!! | AGTTGGTTTTGTCTTCCTCT+TGG | + | chr2.3:62787973-62787992 | MS.gene048239:CDS | 40.0% |
!!! | ATGGATTGCTTTTTGGAGTG+TGG | + | chr2.3:62787634-62787653 | MS.gene048239:intron | 40.0% |
!!! | GTTGGTTTTGTCTTCCTCTT+GGG | + | chr2.3:62787974-62787993 | MS.gene048239:CDS | 40.0% |
!!! | TTGCTTTTTGGAGTGTGGTT+TGG | + | chr2.3:62787639-62787658 | MS.gene048239:intron | 40.0% |
CCATGAATCTTCCGATAAGC+AGG | - | chr2.3:62787231-62787250 | None:intergenic | 45.0% | |
CCGGTTAAAAGGAAGGCAAA+TGG | + | chr2.3:62787048-62787067 | MS.gene048239:CDS | 45.0% | |
CCTGCTTATCGGAAGATTCA+TGG | + | chr2.3:62787228-62787247 | MS.gene048239:CDS | 45.0% | |
CGGAAACAACAATGTCCTTG+TGG | + | chr2.3:62786760-62786779 | MS.gene048239:CDS | 45.0% | |
CGTGTTATGGTTACCCGAAA+AGG | + | chr2.3:62788946-62788965 | MS.gene048239:CDS | 45.0% | |
CTGTCTAAGGAGGTTGTTGA+TGG | + | chr2.3:62787126-62787145 | MS.gene048239:CDS | 45.0% | |
CTTTCTTGGAAAGGGATGTG+AGG | + | chr2.3:62787355-62787374 | MS.gene048239:CDS | 45.0% | |
GATAGGAAATCAGTGAGGTG+TGG | + | chr2.3:62787084-62787103 | MS.gene048239:CDS | 45.0% | |
GGAATGACGTGTTTAGTCTC+AGG | - | chr2.3:62787925-62787944 | None:intergenic | 45.0% | |
GTCTAAGGAGGTTGTTGATG+GGG | + | chr2.3:62787128-62787147 | MS.gene048239:CDS | 45.0% | |
GTGGACAACACAAAAGTGGT+TGG | - | chr2.3:62788476-62788495 | None:intergenic | 45.0% | |
GTGTTTCTCCGGTTCATGAA+AGG | + | chr2.3:62787832-62787851 | MS.gene048239:CDS | 45.0% | |
TCTAATGGCATCTCTAAGCC+CGG | - | chr2.3:62787893-62787912 | None:intergenic | 45.0% | |
! | CGTGCATAATCACGAGCTTT+TGG | + | chr2.3:62787182-62787201 | MS.gene048239:CDS | 45.0% |
! | TACCAATTGAAGAGCATGCG+CGG | + | chr2.3:62788792-62788811 | MS.gene048239:CDS | 45.0% |
AGGTTCTGCAGCACCAGAAT+CGG | + | chr2.3:62786828-62786847 | MS.gene048239:CDS | 50.0% | |
ATGGAGAGCGACACGTGTTA+TGG | + | chr2.3:62788933-62788952 | MS.gene048239:CDS | 50.0% | |
ATTCTATCCGACCTTGACCC+CGG | + | chr2.3:62787871-62787890 | MS.gene048239:CDS | 50.0% | |
CCTCAATGCAGGTGTTTCTC+CGG | + | chr2.3:62787821-62787840 | MS.gene048239:intron | 50.0% | |
CGATGCTTTGCAGCAAGAGT+TGG | + | chr2.3:62788838-62788857 | MS.gene048239:CDS | 50.0% | |
CTAAACACGTCATTCCGGTG+TGG | + | chr2.3:62787929-62787948 | MS.gene048239:CDS | 50.0% | |
CTAATGGCATCTCTAAGCCC+GGG | - | chr2.3:62787892-62787911 | None:intergenic | 50.0% | |
GCTTTCGAAAGCTGGGTTTC+CGG | + | chr2.3:62787275-62787294 | MS.gene048239:CDS | 50.0% | |
GTCATCATCCGCTTCTTTCG+TGG | - | chr2.3:62787481-62787500 | None:intergenic | 50.0% | |
GTGCAAAGCCACGAAAGAAG+CGG | + | chr2.3:62787470-62787489 | MS.gene048239:CDS | 50.0% | |
GTTTGCCCCGGTTAAAAGGA+AGG | + | chr2.3:62787041-62787060 | MS.gene048239:CDS | 50.0% | |
TAATGGCATCTCTAAGCCCG+GGG | - | chr2.3:62787891-62787910 | None:intergenic | 50.0% | |
TGGAGTCTGCAGCATGAATG+TGG | + | chr2.3:62789312-62789331 | MS.gene048239:CDS | 50.0% | |
! | TTGTTGATGGGGTTTCGCAG+TGG | + | chr2.3:62787139-62787158 | MS.gene048239:CDS | 50.0% |
AAGCTGGGTTTCCGGTACAC+CGG | + | chr2.3:62787283-62787302 | MS.gene048239:CDS | 55.0% | |
CCGGAGAAACACCTGCATTG+AGG | - | chr2.3:62787824-62787843 | None:intergenic | 55.0% | |
CTCCGCGCATGCTCTTCAAT+TGG | - | chr2.3:62788797-62788816 | None:intergenic | 55.0% | |
TCCATCAGTCTCGACCCCAT+CGG | - | chr2.3:62789296-62789315 | None:intergenic | 55.0% | |
TTATCGATCCGGGTTTGCCC+CGG | + | chr2.3:62787029-62787048 | MS.gene048239:CDS | 55.0% | |
TTCTATCCGACCTTGACCCC+GGG | + | chr2.3:62787872-62787891 | MS.gene048239:CDS | 55.0% | |
! | CCTTTTAACCGGGGCAAACC+CGG | - | chr2.3:62787040-62787059 | None:intergenic | 55.0% |
! | TGGGCACTGTCCTATGTGAG+AGG | + | chr2.3:62788147-62788166 | MS.gene048239:CDS | 55.0% |
ACCGATGGGGTCGAGACTGA+TGG | + | chr2.3:62789292-62789311 | MS.gene048239:CDS | 60.0% | |
CATCTCTAAGCCCGGGGTCA+AGG | - | chr2.3:62787885-62787904 | None:intergenic | 60.0% | |
CCGGGTTTGCCCCGGTTAAA+AGG | + | chr2.3:62787037-62787056 | MS.gene048239:CDS | 60.0% | |
TCGGCATAACGAGGCCCAAG+AGG | - | chr2.3:62787991-62788010 | None:intergenic | 60.0% | |
TCTAAGCCCGGGGTCAAGGT+CGG | - | chr2.3:62787881-62787900 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.3 | gene | 62786736 | 62789354 | 62786736 | ID=MS.gene048239 |
chr2.3 | mRNA | 62786736 | 62789354 | 62786736 | ID=MS.gene048239.t1;Parent=MS.gene048239 |
chr2.3 | exon | 62786736 | 62787596 | 62786736 | ID=MS.gene048239.t1.exon1;Parent=MS.gene048239.t1 |
chr2.3 | CDS | 62786736 | 62787596 | 62786736 | ID=cds.MS.gene048239.t1;Parent=MS.gene048239.t1 |
chr2.3 | exon | 62787711 | 62787746 | 62787711 | ID=MS.gene048239.t1.exon2;Parent=MS.gene048239.t1 |
chr2.3 | CDS | 62787711 | 62787746 | 62787711 | ID=cds.MS.gene048239.t1;Parent=MS.gene048239.t1 |
chr2.3 | exon | 62787832 | 62788275 | 62787832 | ID=MS.gene048239.t1.exon3;Parent=MS.gene048239.t1 |
chr2.3 | CDS | 62787832 | 62788275 | 62787832 | ID=cds.MS.gene048239.t1;Parent=MS.gene048239.t1 |
chr2.3 | exon | 62788722 | 62789354 | 62788722 | ID=MS.gene048239.t1.exon4;Parent=MS.gene048239.t1 |
chr2.3 | CDS | 62788722 | 62789354 | 62788722 | ID=cds.MS.gene048239.t1;Parent=MS.gene048239.t1 |
Gene Sequence |
Protein sequence |