AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene048387

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene048387.t1 MTR_8g068210 97.345 339 7 2 1 338 1 338 0.0 678
MS.gene048387.t1 MTR_5g031440 50.592 338 92 16 32 338 43 336 8.20e-77 239
MS.gene048387.t1 MTR_2g096740 51.181 127 50 4 12 127 40 165 3.02e-32 122
MS.gene048387.t1 MTR_2g096740 52.066 121 48 3 16 127 61 180 5.27e-32 122
MS.gene048387.t1 MTR_4g088580 68.493 73 23 0 33 105 56 128 1.08e-31 122
MS.gene048387.t1 MTR_8g479350 66.667 78 25 1 32 108 68 145 5.00e-31 120
MS.gene048387.t1 MTR_4g063780 77.273 66 12 1 31 93 74 139 1.30e-30 119
MS.gene048387.t1 MTR_7g024670 53.535 99 36 1 8 96 43 141 3.71e-30 118
MS.gene048387.t1 MTR_4g461080 43.529 170 74 6 28 187 25 182 1.31e-29 114
MS.gene048387.t1 MTR_3g091820 71.212 66 19 0 21 86 32 97 4.80e-29 114
MS.gene048387.t1 MTR_2g093220 66.234 77 23 1 13 86 18 94 4.91e-29 113
MS.gene048387.t1 MTR_8g027295 70.000 70 19 1 21 90 15 82 6.40e-29 112
MS.gene048387.t1 MTR_1g077600 71.212 66 19 0 21 86 32 97 8.47e-29 112
MS.gene048387.t1 MTR_1g077600 71.212 66 19 0 21 86 32 97 9.10e-29 112
MS.gene048387.t1 MTR_2g014060 75.806 62 15 0 22 83 15 76 1.76e-28 113
MS.gene048387.t1 MTR_3g077750 69.355 62 19 0 21 82 50 111 2.84e-28 112
MS.gene048387.t1 MTR_4g022370 74.138 58 15 0 29 86 79 136 2.85e-28 113
MS.gene048387.t1 MTR_3g090430 68.116 69 22 0 20 88 39 107 3.12e-28 112
MS.gene048387.t1 MTR_7g059400 72.881 59 16 0 28 86 72 130 9.93e-28 111
MS.gene048387.t1 MTR_1g056810 75.862 58 14 0 29 86 9 66 2.43e-27 108
MS.gene048387.t1 MTR_4g109980 82.692 52 9 0 31 82 39 90 2.56e-27 109
MS.gene048387.t1 MTR_2g014170 84.000 50 8 0 31 80 44 93 1.48e-26 107
MS.gene048387.t1 MTR_8g015840 69.492 59 18 0 28 86 16 74 3.68e-26 103
MS.gene048387.t1 MTR_2g059540 80.392 51 10 0 30 80 29 79 7.01e-26 103
MS.gene048387.t1 MTR_8g079060 72.727 55 15 0 32 86 29 83 1.35e-25 102
MS.gene048387.t1 MTR_2g013370 65.079 63 21 1 26 88 40 101 1.21e-24 101
MS.gene048387.t1 MTR_7g010950 57.692 78 32 1 7 83 109 186 1.38e-24 104
MS.gene048387.t1 MTR_4g082060 51.190 84 41 0 7 90 97 180 2.71e-24 103
MS.gene048387.t1 MTR_2g016030 53.846 78 36 0 32 109 47 124 4.56e-24 97.1
MS.gene048387.t1 MTR_7g086780 55.000 80 30 1 14 87 75 154 8.75e-24 101
MS.gene048387.t1 MTR_6g027460 57.534 73 25 1 21 87 79 151 9.28e-24 100
MS.gene048387.t1 MTR_4g089095 68.421 57 17 1 32 88 16 71 9.94e-24 98.6
MS.gene048387.t1 MTR_4g089095 68.421 57 17 1 32 88 50 105 1.05e-23 99.4
MS.gene048387.t1 MTR_6g027450 56.164 73 26 1 21 87 72 144 1.52e-23 99.4
MS.gene048387.t1 MTR_8g044220 46.914 81 43 0 6 86 92 172 8.32e-23 99.0
MS.gene048387.t1 MTR_6g012450 45.631 103 50 3 7 104 112 213 1.23e-22 98.6
MS.gene048387.t1 MTR_5g041530 56.757 74 31 1 14 87 122 194 1.46e-22 97.4
MS.gene048387.t1 MTR_3g435480 50.602 83 35 1 9 85 107 189 2.35e-22 97.8
MS.gene048387.t1 MTR_5g041420 55.714 70 31 0 14 83 120 189 1.89e-21 93.6
MS.gene048387.t1 MTR_5g041380 46.914 81 35 1 13 85 100 180 5.87e-19 87.0
MS.gene048387.t1 MTR_5g041400 46.067 89 38 2 5 85 86 172 7.97e-19 86.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene048387.t1 AT5G65590 37.571 354 149 14 4 338 16 316 4.42e-57 187
MS.gene048387.t1 AT5G60200 47.899 119 52 2 14 122 35 153 1.08e-31 120
MS.gene048387.t1 AT1G51700 59.756 82 32 1 28 109 29 109 3.85e-31 116
MS.gene048387.t1 AT2G37590 76.667 60 14 0 29 88 86 145 1.36e-30 119
MS.gene048387.t1 AT2G28810 58.242 91 27 2 4 83 38 128 1.22e-29 115
MS.gene048387.t1 AT5G60850 60.000 80 32 0 31 110 50 129 1.31e-29 115
MS.gene048387.t1 AT3G45610 60.759 79 30 1 8 86 17 94 1.54e-29 114
MS.gene048387.t1 AT2G28810 58.242 91 27 2 4 83 55 145 1.64e-29 116
MS.gene048387.t1 AT3G52440 59.551 89 29 1 29 110 22 110 2.53e-29 113
MS.gene048387.t1 AT3G55370 68.116 69 22 0 29 97 73 141 2.58e-29 115
MS.gene048387.t1 AT1G07640 81.818 55 10 0 32 86 21 75 2.80e-29 114
MS.gene048387.t1 AT3G55370 68.116 69 22 0 29 97 73 141 3.42e-29 115
MS.gene048387.t1 AT3G55370 68.116 69 22 0 29 97 118 186 3.67e-29 115
MS.gene048387.t1 AT1G07640 81.818 55 10 0 32 86 77 131 3.81e-29 114
MS.gene048387.t1 AT2G28510 54.000 100 41 1 31 130 47 141 4.84e-29 113
MS.gene048387.t1 AT3G52440 59.551 89 29 1 29 110 41 129 4.85e-29 113
MS.gene048387.t1 AT1G07640 81.818 55 10 0 32 86 85 139 5.06e-29 114
MS.gene048387.t1 AT3G21270 84.615 52 8 0 32 83 29 80 7.95e-29 110
MS.gene048387.t1 AT5G02460 75.862 58 14 0 29 86 92 149 1.70e-28 114
MS.gene048387.t1 AT4G24060 57.778 90 38 0 21 110 42 131 2.66e-28 112
MS.gene048387.t1 AT5G66940 46.512 129 49 5 25 153 26 134 3.69e-28 109
MS.gene048387.t1 AT1G21340 70.968 62 18 0 30 91 36 97 7.99e-28 109
MS.gene048387.t1 AT3G50410 71.429 63 17 1 24 86 23 84 1.05e-27 109
MS.gene048387.t1 AT1G28310 75.439 57 14 0 32 88 27 83 2.35e-27 109
MS.gene048387.t1 AT4G38000 78.571 56 12 0 31 86 40 95 2.77e-27 107
MS.gene048387.t1 AT3G61850 69.863 73 18 2 21 93 52 120 3.14e-27 108
MS.gene048387.t1 AT3G61850 69.863 73 18 2 21 93 52 120 3.14e-27 108
MS.gene048387.t1 AT1G28310 75.439 57 14 0 32 88 51 107 3.38e-27 109
MS.gene048387.t1 AT3G61850 67.105 76 21 2 18 93 61 132 4.08e-27 108
MS.gene048387.t1 AT4G21050 74.545 55 14 0 34 88 26 80 4.65e-27 106
MS.gene048387.t1 AT3G61850 67.105 76 21 2 18 93 49 120 5.04e-27 108
MS.gene048387.t1 AT3G61850 67.105 76 21 2 18 93 61 132 6.27e-27 108
MS.gene048387.t1 AT5G62940 82.000 50 9 0 33 82 74 123 5.57e-26 107
MS.gene048387.t1 AT4G00940 66.667 66 22 0 22 87 58 123 6.49e-26 105
MS.gene048387.t1 AT4G00940 66.667 66 22 0 22 87 58 123 6.49e-26 105
MS.gene048387.t1 AT4G00940 66.667 66 22 0 22 87 58 123 6.49e-26 105
MS.gene048387.t1 AT1G64620 70.492 61 18 0 21 81 38 98 1.60e-25 105
MS.gene048387.t1 AT2G46590 73.333 60 14 1 20 79 58 115 9.88e-25 103
MS.gene048387.t1 AT2G46590 73.333 60 14 1 20 79 70 127 1.11e-24 103
MS.gene048387.t1 AT4G21040 64.062 64 23 0 34 97 27 90 1.71e-23 97.4
MS.gene048387.t1 AT5G62430 41.818 110 64 0 2 111 24 133 4.44e-23 97.8
MS.gene048387.t1 AT2G34140 57.143 70 28 1 18 85 42 111 9.52e-23 93.6
MS.gene048387.t1 AT3G47500 54.930 71 32 0 13 83 91 161 1.77e-22 98.2
MS.gene048387.t1 AT5G39660 53.086 81 35 2 7 85 112 191 4.03e-22 97.1
MS.gene048387.t1 AT5G39660 53.086 81 35 2 7 85 112 191 4.03e-22 97.1
MS.gene048387.t1 AT5G39660 53.086 81 35 2 7 85 112 191 4.03e-22 97.1
MS.gene048387.t1 AT4G21080 73.077 52 14 0 34 85 27 78 4.77e-22 94.0
MS.gene048387.t1 AT1G26790 57.143 70 28 1 18 85 95 164 5.27e-22 95.9
MS.gene048387.t1 AT1G29160 66.667 54 18 0 32 85 62 115 5.45e-22 91.7
MS.gene048387.t1 AT1G47655 71.429 49 14 0 32 80 29 77 8.31e-22 92.0
MS.gene048387.t1 AT1G69570 66.667 54 18 0 32 85 132 185 1.04e-21 95.5
MS.gene048387.t1 AT4G21030 51.515 66 29 2 34 97 23 87 3.91e-13 67.8

Find 53 sgRNAs with CRISPR-Local

Find 64 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATCTTAGTGTTTGCATTAA+TGG 0.144786 8.1:-36713372 MS.gene048387:CDS
AATGGAGGTGGATTTATTAA+TGG 0.224509 8.1:-36713768 MS.gene048387:CDS
GAAAATTGGTTATAGTAAAA+TGG 0.242887 8.1:+36713897 None:intergenic
GGATATAAATTTAAACCATT+TGG 0.271968 8.1:+36713804 None:intergenic
CTCCACCAATGGAAGAAAAT+TGG 0.291159 8.1:+36713883 None:intergenic
TGAAGAAGAGTACTTATTAA+TGG 0.299609 8.1:+36713983 None:intergenic
GAATTCTTATTCATCTGTTA+TGG 0.312133 8.1:-36713412 MS.gene048387:CDS
TCAAGATTCTGAAACAAAAT+AGG 0.312862 8.1:+36713519 None:intergenic
GCAAAACATGCAGAAGATAT+TGG 0.321728 8.1:-36714094 MS.gene048387:CDS
CTTTAGGGCAAAGCAGTATA+TGG 0.322395 8.1:+36713273 None:intergenic
GAAGAGAAGGGTAATGATAA+AGG 0.339449 8.1:+36713924 None:intergenic
AATGGTGATCATGATCAAAA+TGG 0.343971 8.1:-36713354 MS.gene048387:CDS
ATCAAAATGGTAACAACAAT+TGG 0.348472 8.1:-36713341 MS.gene048387:CDS
GTATTGAATCATTGAGTTGT+AGG 0.351509 8.1:-36713659 MS.gene048387:CDS
AACAACAATTGGATTAATAA+TGG 0.366146 8.1:-36713330 MS.gene048387:CDS
GGTGCAAGTGAATGGTTCTT+TGG 0.371222 8.1:-36713438 MS.gene048387:CDS
GAAGCTTCAAATGCAAATCT+TGG 0.372018 8.1:+36713634 None:intergenic
TTCTCTTCTTCAAATGGAGG+TGG 0.376995 8.1:-36713780 MS.gene048387:CDS
CCTTGTTTGAAGATAATAAC+AGG 0.384597 8.1:-36713593 MS.gene048387:CDS
TAATAATGGTGTTCATGCTT+GGG 0.391047 8.1:-36713316 MS.gene048387:CDS
TATCCTTTCTCTTCTTCAAA+TGG 0.391979 8.1:-36713786 MS.gene048387:CDS
AATTTAAACCATTTGGATCA+AGG 0.394686 8.1:+36713811 None:intergenic
TTTCAAGTTGGTGGTGGTGC+TGG 0.445544 8.1:-36713477 MS.gene048387:CDS
GAAGGGTAATGATAAAGGTA+AGG 0.450658 8.1:+36713929 None:intergenic
TGCAGAAGATATTGGACAAA+TGG 0.451403 8.1:-36714086 MS.gene048387:CDS
CTAAGATCAGTAGTTGTTGC+AGG 0.461438 8.1:+36713387 None:intergenic
TTAATAATGGTGTTCATGCT+TGG 0.476692 8.1:-36713317 MS.gene048387:CDS
TTTCTGAAGAAGAACCTTGT+TGG 0.485232 8.1:+36714228 None:intergenic
GGAAATGAAAATGCAATTCA+AGG 0.492654 8.1:-36713744 MS.gene048387:CDS
GAAAAGAAGGTGCAAGTGAA+TGG 0.503466 8.1:-36713446 MS.gene048387:CDS
GTGTTTGGAGAATCACATCT+TGG 0.505256 8.1:+36714167 None:intergenic
GGAGGTGGATTTATTAATGG+TGG 0.512038 8.1:-36713765 MS.gene048387:CDS
TTGCGTAACGTTCCGATAGG+TGG 0.519722 8.1:-36714056 MS.gene048387:CDS
TTCTGAAACAAAATAGGTTG+AGG 0.522960 8.1:+36713525 None:intergenic
CCTTTCTCTTCTTCAAATGG+AGG 0.533783 8.1:-36713783 MS.gene048387:CDS
TCAGAATCTTGAGATTTCAA+AGG 0.543309 8.1:-36713508 MS.gene048387:CDS
CCTCCATTTGAAGAAGAGAA+AGG 0.544548 8.1:+36713783 None:intergenic
GCTGAGATGTTTCAAGTTGG+TGG 0.546166 8.1:-36713486 MS.gene048387:CDS
GATAATAACAGGAAAGAGAG+TGG 0.551054 8.1:-36713582 MS.gene048387:CDS
CGTAACGTTCCGATAGGTGG+TGG 0.551463 8.1:-36714053 MS.gene048387:CDS
CCTGTTATTATCTTCAAACA+AGG 0.552716 8.1:+36713593 None:intergenic
TTTCTGCAACCACCACCTAT+CGG 0.561402 8.1:+36714044 None:intergenic
GAGATGTTTCAAGTTGGTGG+TGG 0.563036 8.1:-36713483 MS.gene048387:CDS
AAGGGTAATGATAAAGGTAA+GGG 0.574636 8.1:+36713930 None:intergenic
TACTTATTAATGGCTTGAGA+TGG 0.577342 8.1:+36713993 None:intergenic
TGAACTTGAAACTCCACCAA+TGG 0.581179 8.1:+36713872 None:intergenic
AAGGCTGAGATGTTTCAAGT+TGG 0.583200 8.1:-36713489 MS.gene048387:CDS
CCAAGATGAAAATCAAGTGA+AGG 0.600819 8.1:+36713960 None:intergenic
AATAATGGTGTTCATGCTTG+GGG 0.619834 8.1:-36713315 MS.gene048387:CDS
GCTGGTGATTCAAGAAAAGA+AGG 0.622592 8.1:-36713459 MS.gene048387:CDS
TCGTTGCGTAACGTTCCGAT+AGG 0.633139 8.1:-36714059 MS.gene048387:CDS
AGAAGATATTGGACAAATGG+TGG 0.635966 8.1:-36714083 MS.gene048387:CDS
CAAGATCATGAAAACCAACA+AGG 0.656147 8.1:-36714242 MS.gene048387:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACAACAATTGGATTAATAA+TGG - chr8.1:36714214-36714233 MS.gene048387:CDS 20.0%
!! GAAAATTGGTTATAGTAAAA+TGG + chr8.1:36713650-36713669 None:intergenic 20.0%
!! GGATATAAATTTAAACCATT+TGG + chr8.1:36713743-36713762 None:intergenic 20.0%
! AATTTAAACCATTTGGATCA+AGG + chr8.1:36713736-36713755 None:intergenic 25.0%
! ATCAAAATGGTAACAACAAT+TGG - chr8.1:36714203-36714222 MS.gene048387:CDS 25.0%
! GAATTCTTATTCATCTGTTA+TGG - chr8.1:36714132-36714151 MS.gene048387:CDS 25.0%
!! TATAACCAATTTTCTTCCAT+TGG - chr8.1:36713656-36713675 MS.gene048387:CDS 25.0%
!! TTTTTGTTGATCTGTTATCT+TGG + chr8.1:36713342-36713361 None:intergenic 25.0%
!!! TAAAATGGTTTTGAAGAGAA+GGG + chr8.1:36713635-36713654 None:intergenic 25.0%
!!! TCAAGATTCTGAAACAAAAT+AGG + chr8.1:36714028-36714047 None:intergenic 25.0%
!!! TGAAGAAGAGTACTTATTAA+TGG + chr8.1:36713564-36713583 None:intergenic 25.0%
AAGGGTAATGATAAAGGTAA+GGG + chr8.1:36713617-36713636 None:intergenic 30.0%
AATGGTGATCATGATCAAAA+TGG - chr8.1:36714190-36714209 MS.gene048387:CDS 30.0%
CCTGTTATTATCTTCAAACA+AGG + chr8.1:36713954-36713973 None:intergenic 30.0%
GATCTTAGTGTTTGCATTAA+TGG - chr8.1:36714172-36714191 MS.gene048387:CDS 30.0%
GGAAATGAAAATGCAATTCA+AGG - chr8.1:36713800-36713819 MS.gene048387:CDS 30.0%
TAATAATGGTGTTCATGCTT+GGG - chr8.1:36714228-36714247 MS.gene048387:CDS 30.0%
TACTTATTAATGGCTTGAGA+TGG + chr8.1:36713554-36713573 None:intergenic 30.0%
TATCCTTTCTCTTCTTCAAA+TGG - chr8.1:36713758-36713777 MS.gene048387:CDS 30.0%
TCAGAATCTTGAGATTTCAA+AGG - chr8.1:36714036-36714055 MS.gene048387:CDS 30.0%
TTAATAATGGTGTTCATGCT+TGG - chr8.1:36714227-36714246 MS.gene048387:CDS 30.0%
! AATGGAGGTGGATTTATTAA+TGG - chr8.1:36713776-36713795 MS.gene048387:CDS 30.0%
! CCTTGTTTGAAGATAATAAC+AGG - chr8.1:36713951-36713970 MS.gene048387:CDS 30.0%
! GTATTGAATCATTGAGTTGT+AGG - chr8.1:36713885-36713904 MS.gene048387:CDS 30.0%
! TAGTAGCAGAATTTTGTGTT+TGG + chr8.1:36713395-36713414 None:intergenic 30.0%
!! TTCTGAAACAAAATAGGTTG+AGG + chr8.1:36714022-36714041 None:intergenic 30.0%
!!! GTAAAATGGTTTTGAAGAGA+AGG + chr8.1:36713636-36713655 None:intergenic 30.0%
AATAATGGTGTTCATGCTTG+GGG - chr8.1:36714229-36714248 MS.gene048387:CDS 35.0%
AGAAGATATTGGACAAATGG+TGG - chr8.1:36713461-36713480 MS.gene048387:CDS 35.0%
CAAGATCATGAAAACCAACA+AGG - chr8.1:36713302-36713321 MS.gene048387:CDS 35.0%
CCAAGATGAAAATCAAGTGA+AGG + chr8.1:36713587-36713606 None:intergenic 35.0%
GAAGAGAAGGGTAATGATAA+AGG + chr8.1:36713623-36713642 None:intergenic 35.0%
GAAGCTTCAAATGCAAATCT+TGG + chr8.1:36713913-36713932 None:intergenic 35.0%
GAAGGGTAATGATAAAGGTA+AGG + chr8.1:36713618-36713637 None:intergenic 35.0%
GATAATAACAGGAAAGAGAG+TGG - chr8.1:36713962-36713981 MS.gene048387:CDS 35.0%
GCAAAACATGCAGAAGATAT+TGG - chr8.1:36713450-36713469 MS.gene048387:CDS 35.0%
TGCAGAAGATATTGGACAAA+TGG - chr8.1:36713458-36713477 MS.gene048387:CDS 35.0%
! AACCAATTTTCTTCCATTGG+TGG - chr8.1:36713659-36713678 MS.gene048387:CDS 35.0%
! AGTTTTCACCTTGATCCAAA+TGG - chr8.1:36713725-36713744 MS.gene048387:CDS 35.0%
! CATGTTTTGCAGAAATGTCT+TGG + chr8.1:36713440-36713459 None:intergenic 35.0%
! CCTTCACTTGATTTTCATCT+TGG - chr8.1:36713584-36713603 MS.gene048387:CDS 35.0%
! TTTCTGAAGAAGAACCTTGT+TGG + chr8.1:36713319-36713338 None:intergenic 35.0%
!! TTGGTTTTCATGATCTTGTG+TGG + chr8.1:36713300-36713319 None:intergenic 35.0%
!!! TCTTGTGTGGTTTTGTGATT+TGG + chr8.1:36713287-36713306 None:intergenic 35.0%
CCTCCATTTGAAGAAGAGAA+AGG + chr8.1:36713764-36713783 None:intergenic 40.0%
CCTTTCTCTTCTTCAAATGG+AGG - chr8.1:36713761-36713780 MS.gene048387:CDS 40.0%
CTAAGATCAGTAGTTGTTGC+AGG + chr8.1:36714160-36714179 None:intergenic 40.0%
CTCCACCAATGGAAGAAAAT+TGG + chr8.1:36713664-36713683 None:intergenic 40.0%
GCTGGTGATTCAAGAAAAGA+AGG - chr8.1:36714085-36714104 MS.gene048387:CDS 40.0%
GTGTTTGGAGAATCACATCT+TGG + chr8.1:36713380-36713399 None:intergenic 40.0%
TGAACTTGAAACTCCACCAA+TGG + chr8.1:36713675-36713694 None:intergenic 40.0%
TTCTCTTCTTCAAATGGAGG+TGG - chr8.1:36713764-36713783 MS.gene048387:CDS 40.0%
! AAGGCTGAGATGTTTCAAGT+TGG - chr8.1:36714055-36714074 MS.gene048387:CDS 40.0%
! GAAAAGAAGGTGCAAGTGAA+TGG - chr8.1:36714098-36714117 MS.gene048387:CDS 40.0%
! GGAGGTGGATTTATTAATGG+TGG - chr8.1:36713779-36713798 MS.gene048387:CDS 40.0%
! TGGAACTGTTTTGCTTTCTC+AGG - chr8.1:36713982-36714001 MS.gene048387:CDS 40.0%
GGTGCAAGTGAATGGTTCTT+TGG - chr8.1:36714106-36714125 MS.gene048387:CDS 45.0%
TTTCTGCAACCACCACCTAT+CGG + chr8.1:36713503-36713522 None:intergenic 45.0%
!! GAGATGTTTCAAGTTGGTGG+TGG - chr8.1:36714061-36714080 MS.gene048387:CDS 45.0%
!! GCTGAGATGTTTCAAGTTGG+TGG - chr8.1:36714058-36714077 MS.gene048387:CDS 45.0%
TCGTTGCGTAACGTTCCGAT+AGG - chr8.1:36713485-36713504 MS.gene048387:CDS 50.0%
TTGCGTAACGTTCCGATAGG+TGG - chr8.1:36713488-36713507 MS.gene048387:CDS 50.0%
!! TTTCAAGTTGGTGGTGGTGC+TGG - chr8.1:36714067-36714086 MS.gene048387:CDS 50.0%
CGTAACGTTCCGATAGGTGG+TGG - chr8.1:36713491-36713510 MS.gene048387:CDS 55.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 36713275 36714291 36713275 ID=MS.gene048387
chr8.1 mRNA 36713275 36714291 36713275 ID=MS.gene048387.t1;Parent=MS.gene048387
chr8.1 exon 36713275 36714291 36713275 ID=MS.gene048387.t1.exon1;Parent=MS.gene048387.t1
chr8.1 CDS 36713275 36714291 36713275 ID=cds.MS.gene048387.t1;Parent=MS.gene048387.t1
Gene Sequence

>MS.gene048387

ATGGTGGCACCAAATCACAAAACCACACAAGATCATGAAAACCAACAAGGTTCTTCTTCAGAAACCAAGATAACAGATCAACAAAAAGTTGCAGTAAAATGTCCAAGATGTGATTCTCCAAACACAAAATTCTGCTACTACAACAACTACAGTCTCACTCAACCAAGACATTTCTGCAAAACATGCAGAAGATATTGGACAAATGGTGGATCGTTGCGTAACGTTCCGATAGGTGGTGGTTGCAGAAAGAAACAAAAACTCAAACACTCATCTACACCATCTCAAGCCATTAATAAGTACTCTTCTTCACCTTCACTTGATTTTCATCTTGGTTCTTTACCCTTACCTTTATCATTACCCTTCTCTTCAAAACCATTTTACTATAACCAATTTTCTTCCATTGGTGGAGTTTCAAGTTCAAACACTTGTGTTTCTACTACAAGTGCTTCAAGTTTTCACCTTGATCCAAATGGTTTAAATTTATATCCTTTCTCTTCTTCAAATGGAGGTGGATTTATTAATGGTGGAAATGAAAATGCAATTCAAGGAATGAACTTTATGAATGTGAGTACTAGTGCTAATAATGCTAATTGCACTAGTCTTGCTTCTAGTATTGAATCATTGAGTTGTAGGAACCAAGATTTGCATTTGAAGCTTCAGCAGCAGAGATTAGCAACCTTGTTTGAAGATAATAACAGGAAAGAGAGTGGAACTGTTTTGCTTTCTCAGGTTAGCATTGAAAAGCCTCAACCTATTTTGTTTCAGAATCTTGAGATTTCAAAGGCTGAGATGTTTCAAGTTGGTGGTGGTGCTGGTGATTCAAGAAAAGAAGGTGCAAGTGAATGGTTCTTTGGTATGAATTCTTATTCATCTGTTATGGCTCCTGCAACAACTACTGATCTTAGTGTTTGCATTAATGGTGATCATGATCAAAATGGTAACAACAATTGGATTAATAATGGTGTTCATGCTTGGGGTGATGTGCAGCAGCAGCAACCATATACTGCTTTGCCCTAA
Protein sequence

>MS.gene048387.t1

MVAPNHKTTQDHENQQGSSSETKITDQQKVAVKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTNGGSLRNVPIGGGCRKKQKLKHSSTPSQAINKYSSSPSLDFHLGSLPLPLSLPFSSKPFYYNQFSSIGGVSSSNTCVSTTSASSFHLDPNGLNLYPFSSSNGGGFINGGNENAIQGMNFMNVSTSANNANCTSLASSIESLSCRNQDLHLKLQQQRLATLFEDNNRKESGTVLLSQVSIEKPQPILFQNLEISKAEMFQVGGGAGDSRKEGASEWFFGMNSYSSVMAPATTTDLSVCINGDHDQNGNNNWINNGVHAWGDVQQQQPYTALP