Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048605.t1 | XP_003590850.2 | 77.5 | 653 | 90 | 4 | 1 | 596 | 1 | 653 | 4.10E-282 | 980.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048605.t1 | Q9LUZ4 | 49.1 | 601 | 254 | 17 | 21 | 587 | 2 | 584 | 2.1e-138 | 494.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048605.t1 | G7I4W5 | 77.5 | 653 | 90 | 4 | 1 | 596 | 1 | 653 | 2.9e-282 | 980.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene048605.t1 | TF | C3H |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048605.t1 | MTR_1g075890 | 77.335 | 653 | 91 | 4 | 1 | 596 | 1 | 653 | 0.0 | 955 |
| MS.gene048605.t1 | MTR_3g464260 | 76.239 | 585 | 50 | 5 | 37 | 621 | 29 | 524 | 0.0 | 860 |
| MS.gene048605.t1 | MTR_3g464280 | 67.663 | 569 | 108 | 6 | 1 | 568 | 1 | 494 | 0.0 | 703 |
| MS.gene048605.t1 | MTR_5g071070 | 52.107 | 712 | 237 | 19 | 1 | 621 | 1 | 699 | 0.0 | 622 |
| MS.gene048605.t1 | MTR_5g071070 | 51.905 | 630 | 201 | 18 | 81 | 621 | 1 | 617 | 0.0 | 536 |
| MS.gene048605.t1 | MTR_5g082830 | 45.723 | 678 | 260 | 17 | 28 | 621 | 25 | 678 | 2.06e-177 | 519 |
| MS.gene048605.t1 | MTR_3g464290 | 57.684 | 449 | 142 | 10 | 181 | 612 | 54 | 471 | 3.38e-138 | 411 |
| MS.gene048605.t1 | MTR_3g070880 | 42.539 | 583 | 206 | 16 | 31 | 588 | 8 | 486 | 1.24e-135 | 406 |
| MS.gene048605.t1 | MTR_7g092070 | 47.280 | 478 | 195 | 8 | 30 | 454 | 44 | 517 | 1.92e-135 | 413 |
| MS.gene048605.t1 | MTR_3g029590 | 39.466 | 674 | 269 | 24 | 30 | 592 | 42 | 687 | 3.62e-124 | 384 |
| MS.gene048605.t1 | MTR_3g464270 | 54.032 | 372 | 136 | 7 | 226 | 585 | 8 | 356 | 1.51e-115 | 349 |
| MS.gene048605.t1 | MTR_1g050438 | 40.299 | 469 | 222 | 11 | 32 | 453 | 14 | 471 | 3.16e-102 | 322 |
| MS.gene048605.t1 | MTR_0728s0020 | 40.299 | 469 | 222 | 11 | 32 | 453 | 30 | 487 | 1.30e-101 | 322 |
| MS.gene048605.t1 | MTR_3g435590 | 45.504 | 367 | 187 | 5 | 30 | 384 | 29 | 394 | 5.98e-98 | 307 |
| MS.gene048605.t1 | MTR_3g435680 | 59.777 | 179 | 61 | 5 | 204 | 378 | 130 | 301 | 9.92e-68 | 226 |
| MS.gene048605.t1 | MTR_8g102100 | 47.248 | 218 | 105 | 3 | 171 | 380 | 25 | 240 | 2.96e-57 | 197 |
| MS.gene048605.t1 | MTR_6g090380 | 62.121 | 132 | 41 | 1 | 198 | 329 | 83 | 205 | 2.58e-55 | 192 |
| MS.gene048605.t1 | MTR_3g103960 | 54.839 | 155 | 50 | 3 | 217 | 370 | 43 | 178 | 4.67e-53 | 183 |
| MS.gene048605.t1 | MTR_2g090605 | 63.063 | 111 | 41 | 0 | 227 | 337 | 77 | 187 | 1.46e-49 | 178 |
| MS.gene048605.t1 | MTR_4g078660 | 59.813 | 107 | 43 | 0 | 223 | 329 | 56 | 162 | 5.07e-47 | 168 |
| MS.gene048605.t1 | MTR_1g081420 | 80.851 | 47 | 9 | 0 | 488 | 534 | 182 | 228 | 4.05e-17 | 81.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048605.t1 | AT5G58620 | 49.085 | 601 | 254 | 17 | 21 | 587 | 2 | 584 | 4.93e-175 | 511 |
| MS.gene048605.t1 | AT3G55980 | 44.882 | 635 | 274 | 16 | 1 | 620 | 1 | 574 | 3.58e-161 | 474 |
| MS.gene048605.t1 | AT3G55980 | 45.039 | 635 | 273 | 17 | 1 | 620 | 68 | 641 | 1.83e-160 | 474 |
| MS.gene048605.t1 | AT2G40140 | 46.566 | 597 | 267 | 16 | 1 | 587 | 1 | 555 | 7.15e-160 | 471 |
| MS.gene048605.t1 | AT2G40140 | 46.566 | 597 | 267 | 16 | 1 | 587 | 1 | 555 | 7.15e-160 | 471 |
| MS.gene048605.t1 | AT5G12850 | 41.100 | 618 | 261 | 21 | 25 | 552 | 34 | 638 | 4.44e-132 | 404 |
| MS.gene048605.t1 | AT2G41900 | 46.320 | 462 | 201 | 9 | 25 | 449 | 40 | 491 | 1.99e-128 | 394 |
| MS.gene048605.t1 | AT4G29190 | 52.326 | 172 | 60 | 2 | 216 | 380 | 68 | 224 | 8.26e-56 | 193 |
| MS.gene048605.t1 | AT5G07500 | 62.810 | 121 | 45 | 0 | 209 | 329 | 34 | 154 | 3.36e-54 | 185 |
| MS.gene048605.t1 | AT2G19810 | 64.754 | 122 | 41 | 1 | 212 | 331 | 61 | 182 | 5.93e-54 | 188 |
| MS.gene048605.t1 | AT2G25900 | 60.465 | 129 | 51 | 0 | 223 | 351 | 86 | 214 | 1.25e-53 | 186 |
| MS.gene048605.t1 | AT2G25900 | 60.465 | 129 | 51 | 0 | 223 | 351 | 86 | 214 | 1.25e-53 | 186 |
| MS.gene048605.t1 | AT1G03790 | 53.548 | 155 | 64 | 3 | 194 | 344 | 53 | 203 | 1.72e-50 | 180 |
| MS.gene048605.t1 | AT5G44260 | 59.375 | 128 | 47 | 2 | 205 | 331 | 42 | 165 | 1.62e-48 | 174 |
Find 145 sgRNAs with CRISPR-Local
Find 163 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGAAAACCTACTTGTTTA+AGG | 0.075570 | 3.1:-48227490 | None:intergenic |
| GCTCTTCGTTGTGCTGTTTC+TGG | 0.104817 | 3.1:+48227278 | MS.gene048605:CDS |
| CTTATGGTTGCTGCCTTATT+TGG | 0.182687 | 3.1:+48227176 | MS.gene048605:CDS |
| GCCTTCTACTTTCTCTGGTT+GGG | 0.192497 | 3.1:+48228495 | MS.gene048605:CDS |
| CTTACCAATTCAAATGTTAT+TGG | 0.199131 | 3.1:+48228358 | MS.gene048605:CDS |
| TTGTCAAACTGGTTTGATTA+AGG | 0.208098 | 3.1:+48226965 | MS.gene048605:CDS |
| ATCATCTACGCCTTCTAGTA+TGG | 0.227210 | 3.1:-48227450 | None:intergenic |
| TTGATTAAGGAAAATGAATA+TGG | 0.284568 | 3.1:+48226978 | MS.gene048605:CDS |
| CACACCCTTGCTTCCAAATA+AGG | 0.291991 | 3.1:-48227189 | None:intergenic |
| ATGAGGAAATCTTATTCTTT+CGG | 0.306520 | 3.1:+48228571 | MS.gene048605:CDS |
| ACAGAACCGCGTCGGGATTA+TGG | 0.307094 | 3.1:-48228750 | None:intergenic |
| CAAGGGCTTATTCTCATGAT+TGG | 0.318225 | 3.1:+48227654 | MS.gene048605:CDS |
| TTCACAGATGCTGTTGAAAA+AGG | 0.320014 | 3.1:+48227071 | MS.gene048605:CDS |
| ATGGAGCCTTCTACTTTCTC+TGG | 0.332795 | 3.1:+48228490 | MS.gene048605:CDS |
| GTGTCCCTTGCCCCGAGTTT+CGG | 0.333825 | 3.1:+48227747 | MS.gene048605:CDS |
| GAACGCAAACCAGCAACTTT+GGG | 0.341182 | 3.1:+48228321 | MS.gene048605:CDS |
| AATAGAAAACCTTGTCAAAC+TGG | 0.355053 | 3.1:+48226954 | MS.gene048605:CDS |
| GTCTTTCATCCCCTTCAAAT+AGG | 0.355872 | 3.1:+48228218 | MS.gene048605:CDS |
| TATTGATCAAATTCCATTGT+TGG | 0.357494 | 3.1:-48228703 | None:intergenic |
| GAGGGTTGGATCGAAGGAAA+TGG | 0.360734 | 3.1:+48227133 | MS.gene048605:CDS |
| GCAAACCCTTCTGGTGCATC+TGG | 0.368627 | 3.1:-48227873 | None:intergenic |
| TTCTCGGCATCTGAAGGGTT+GGG | 0.369174 | 3.1:-48228129 | None:intergenic |
| AGCCTTCTACTTTCTCTGGT+TGG | 0.373886 | 3.1:+48228494 | MS.gene048605:CDS |
| AATGACAGCCCCAAAGTTGC+TGG | 0.379876 | 3.1:-48228330 | None:intergenic |
| CGACCGTTGTATGCTTCTAC+TGG | 0.382257 | 3.1:+48227923 | MS.gene048605:CDS |
| AGAACGCAAACCAGCAACTT+TGG | 0.384644 | 3.1:+48228320 | MS.gene048605:CDS |
| TGATCCAATAACATTTGAAT+TGG | 0.388637 | 3.1:-48228362 | None:intergenic |
| TTCACCTAGTGCTTCTTCAA+TGG | 0.396899 | 3.1:+48227979 | MS.gene048605:CDS |
| TGAAGAGAGGACACCTCTTA+TGG | 0.399251 | 3.1:+48227160 | MS.gene048605:CDS |
| TCTGGTTGGGGCTCGCCTGA+TGG | 0.406071 | 3.1:+48228508 | MS.gene048605:CDS |
| CCTTCTACTTTCTCTGGTTG+GGG | 0.410402 | 3.1:+48228496 | MS.gene048605:CDS |
| AAGTCGATGAGGTAGGATTA+TGG | 0.417281 | 3.1:+48227102 | MS.gene048605:CDS |
| GTATCTTCGGTTCAAGGAAT+AGG | 0.421539 | 3.1:+48227417 | MS.gene048605:CDS |
| AGGGTTGGATCGAAGGAAAT+GGG | 0.426387 | 3.1:+48227134 | MS.gene048605:CDS |
| CTAGTAGTATCTTCGGTTCA+AGG | 0.426572 | 3.1:+48227411 | MS.gene048605:CDS |
| ATCTGTTTCTCGGCATCTGA+AGG | 0.426852 | 3.1:-48228135 | None:intergenic |
| GGTGTGTTGTCTTATATTCT+CGG | 0.428366 | 3.1:+48227206 | MS.gene048605:CDS |
| CGAGTGTCCATTTGTTCACC+CGG | 0.428988 | 3.1:+48227679 | MS.gene048605:CDS |
| TCAAAGTGAAGCCTTGTTCA+AGG | 0.431149 | 3.1:+48227636 | MS.gene048605:CDS |
| CCCCAACCAGAGAAAGTAGA+AGG | 0.432620 | 3.1:-48228496 | None:intergenic |
| GCATGATCCTTTCCGAAACT+CGG | 0.433294 | 3.1:-48227759 | None:intergenic |
| TTGAAAACTGCACTGAATGC+TGG | 0.433495 | 3.1:+48228157 | MS.gene048605:CDS |
| TTTCTCGGCATCTGAAGGGT+TGG | 0.435722 | 3.1:-48228130 | None:intergenic |
| TGCCACGTGGTTCCAGCCAC+AGG | 0.439059 | 3.1:-48228079 | None:intergenic |
| TATATCTCATTGTTTATGTC+AGG | 0.444342 | 3.1:-48227584 | None:intergenic |
| TCAGCATCATCGCCTGTGGC+TGG | 0.447105 | 3.1:+48228067 | MS.gene048605:CDS |
| TTATGGTATGGAAGGAGGGT+TGG | 0.455006 | 3.1:+48227119 | MS.gene048605:CDS |
| TTCTGCTACCTCAGTTGCCA+TGG | 0.458161 | 3.1:+48228471 | MS.gene048605:CDS |
| CCATTGATGTGAATGATAAC+TGG | 0.461223 | 3.1:+48227363 | MS.gene048605:CDS |
| TGTGAAGGATGCTCCAACAA+TGG | 0.461854 | 3.1:+48228690 | MS.gene048605:CDS |
| CCCTATCTGAGCCGCACTCT+CGG | 0.465985 | 3.1:-48227250 | None:intergenic |
| ACTCTTTCAAGCCTATTTGA+AGG | 0.467952 | 3.1:-48228229 | None:intergenic |
| TAATCTTTCTTCTCAGTTCG+AGG | 0.468212 | 3.1:-48227542 | None:intergenic |
| GGCAAAGACAGAACCGCGTC+GGG | 0.470484 | 3.1:-48228757 | None:intergenic |
| TGGAAGGAGGGTTGGATCGA+AGG | 0.473211 | 3.1:+48227127 | MS.gene048605:CDS |
| TGCTGCCTTATTTGGAAGCA+AGG | 0.473427 | 3.1:+48227184 | MS.gene048605:CDS |
| CCAGTTATCATTCACATCAA+TGG | 0.477903 | 3.1:-48227363 | None:intergenic |
| AATAAGGCAGCAACCATAAG+AGG | 0.478339 | 3.1:-48227173 | None:intergenic |
| ATACTACAACCCATACTAGA+AGG | 0.480130 | 3.1:+48227440 | MS.gene048605:CDS |
| GAATGCCATTACGTCATCTT+CGG | 0.481296 | 3.1:-48227051 | None:intergenic |
| CTCTTTCAAGCCTATTTGAA+GGG | 0.481736 | 3.1:-48228228 | None:intergenic |
| TACAACGGTCGAAGCTCCTC+TGG | 0.485266 | 3.1:-48227911 | None:intergenic |
| TGCTCCATGTACAAATGCTC+TGG | 0.486006 | 3.1:-48228778 | None:intergenic |
| CAGGTGTAATGATATTTCCT+TGG | 0.486054 | 3.1:-48227725 | None:intergenic |
| AGAACAAGGCTTTGCAAGGA+TGG | 0.491396 | 3.1:+48227848 | MS.gene048605:CDS |
| TCGGTTAACATCAACGCGAC+TGG | 0.494406 | 3.1:-48227231 | None:intergenic |
| CATGATCCTTTCCGAAACTC+GGG | 0.495650 | 3.1:-48227758 | None:intergenic |
| AGCCTTGTTCTATATTGAGC+AGG | 0.500362 | 3.1:-48227836 | None:intergenic |
| ACCGAGAGTGCGGCTCAGAT+AGG | 0.501399 | 3.1:+48227249 | MS.gene048605:CDS |
| TTTGCCAGAGCATTTGTACA+TGG | 0.501745 | 3.1:+48228774 | MS.gene048605:CDS |
| ATTGAGTTCATTGCAGCGGA+TGG | 0.503761 | 3.1:-48228545 | None:intergenic |
| CTCATTGTTTATGTCAGGTA+GGG | 0.505295 | 3.1:-48227579 | None:intergenic |
| TCGGTATCTAGTAGTATCTT+CGG | 0.509155 | 3.1:+48227404 | MS.gene048605:CDS |
| GATGATTTCCTTAAACAAGT+AGG | 0.511967 | 3.1:+48227482 | MS.gene048605:CDS |
| CCTTTCCGAAACTCGGGGCA+AGG | 0.514381 | 3.1:-48227752 | None:intergenic |
| CAAAGTGAAGCCTTGTTCAA+GGG | 0.517860 | 3.1:+48227637 | MS.gene048605:CDS |
| TAGGATTATGGTATGGAAGG+AGG | 0.520921 | 3.1:+48227114 | MS.gene048605:CDS |
| TTGGGTTAATTCTCTTGTGA+AGG | 0.520969 | 3.1:+48228675 | MS.gene048605:CDS |
| AGGTAGGATTATGGTATGGA+AGG | 0.522426 | 3.1:+48227111 | MS.gene048605:CDS |
| TCAGGTAGGGATGGATCAAT+CGG | 0.525749 | 3.1:-48227566 | None:intergenic |
| AGGATTATGGTATGGAAGGA+GGG | 0.525824 | 3.1:+48227115 | MS.gene048605:CDS |
| CGCCTGATGGAAAATTAGAC+TGG | 0.526081 | 3.1:+48228521 | MS.gene048605:CDS |
| AAACTCGGGGCAAGGGACAC+AGG | 0.532559 | 3.1:-48227744 | None:intergenic |
| CTTTATTGAGCGCAGTAGCA+TGG | 0.532911 | 3.1:+48228426 | MS.gene048605:CDS |
| TTCAGCCGAAGATGACGTAA+TGG | 0.534190 | 3.1:+48227046 | MS.gene048605:CDS |
| TTGTTTATGTCAGGTAGGGA+TGG | 0.536185 | 3.1:-48227575 | None:intergenic |
| CCGAGAGTGCGGCTCAGATA+GGG | 0.539522 | 3.1:+48227250 | MS.gene048605:CDS |
| ACGCAAGGCGCCGTGATCCA+AGG | 0.541532 | 3.1:+48227708 | MS.gene048605:CDS |
| GCTGCCTTATTTGGAAGCAA+GGG | 0.541989 | 3.1:+48227185 | MS.gene048605:CDS |
| TCTCATTGTTTATGTCAGGT+AGG | 0.546336 | 3.1:-48227580 | None:intergenic |
| AAGCAAAAGCTTGATAATCT+CGG | 0.547575 | 3.1:-48227318 | None:intergenic |
| TCATCTACGCCTTCTAGTAT+GGG | 0.552732 | 3.1:-48227449 | None:intergenic |
| CGGGTGAACAAATGGACACT+CGG | 0.558339 | 3.1:-48227678 | None:intergenic |
| GATGGAGTCAAAGGTGGCGT+TGG | 0.561844 | 3.1:-48228046 | None:intergenic |
| TCTGTTTCTCGGCATCTGAA+GGG | 0.564138 | 3.1:-48228134 | None:intergenic |
| GTGCAACGACTTGTTTGTCT+CGG | 0.565690 | 3.1:+48227385 | MS.gene048605:CDS |
| GATGAGGTAGGATTATGGTA+TGG | 0.568486 | 3.1:+48227107 | MS.gene048605:CDS |
| GCAATGAACTCAATAAAATG+AGG | 0.570959 | 3.1:+48228554 | MS.gene048605:CDS |
| CGGAAAGGATCATGCAGCAA+AGG | 0.576344 | 3.1:+48227767 | MS.gene048605:CDS |
| CTTTCCGAAACTCGGGGCAA+GGG | 0.578389 | 3.1:-48227751 | None:intergenic |
| GTGGAGCAGCAACACGATGT+AGG | 0.579328 | 3.1:+48227515 | MS.gene048605:CDS |
| GGTGAATTTGAATATGATGT+AGG | 0.581011 | 3.1:-48227962 | None:intergenic |
| CCTTGCCCCGAGTTTCGGAA+AGG | 0.584921 | 3.1:+48227752 | MS.gene048605:CDS |
| ATATAGAACAAGGCTTTGCA+AGG | 0.588932 | 3.1:+48227844 | MS.gene048605:CDS |
| TCTTTCAAGCCTATTTGAAG+GGG | 0.589279 | 3.1:-48228227 | None:intergenic |
| GCTCTCGCTTTGCTTTGAGA+AGG | 0.591116 | 3.1:-48228404 | None:intergenic |
| TCCATCAGCATCATCGCCTG+TGG | 0.592527 | 3.1:+48228063 | MS.gene048605:CDS |
| AATGATATTTCCTTGGATCA+CGG | 0.593424 | 3.1:-48227718 | None:intergenic |
| GAGTGTCCATTTGTTCACCC+GGG | 0.599662 | 3.1:+48227680 | MS.gene048605:CDS |
| AAATAATAAGTCATGTGCAA+CGG | 0.601617 | 3.1:+48226927 | None:intergenic |
| GCCACAGGCGATGATGCTGA+TGG | 0.605560 | 3.1:-48228064 | None:intergenic |
| TGGCAAAGACAGAACCGCGT+CGG | 0.609621 | 3.1:-48228758 | None:intergenic |
| ATGGAACCAGATGCACCAGA+AGG | 0.610080 | 3.1:+48227867 | MS.gene048605:CDS |
| AGAGAAAGTAGAAGGCTCCA+TGG | 0.611618 | 3.1:-48228488 | None:intergenic |
| TGATGCATCTGCATTGTGGT+CGG | 0.616664 | 3.1:-48228298 | None:intergenic |
| AGAAGGCTCCATGGCAACTG+AGG | 0.621343 | 3.1:-48228479 | None:intergenic |
| AGTGTCCATTTGTTCACCCG+GGG | 0.625388 | 3.1:+48227681 | MS.gene048605:CDS |
| AACGCAAACCAGCAACTTTG+GGG | 0.627480 | 3.1:+48228322 | MS.gene048605:CDS |
| TGAGAATAAGCCCTTGAACA+AGG | 0.627841 | 3.1:-48227647 | None:intergenic |
| GAACATGAAGTCGATGAGGT+AGG | 0.628445 | 3.1:+48227095 | MS.gene048605:CDS |
| GAATCCATTGAAGAAGCACT+AGG | 0.630832 | 3.1:-48227983 | None:intergenic |
| ATTGGATCACCACAATTCAG+AGG | 0.631456 | 3.1:+48228376 | MS.gene048605:CDS |
| GCAGATTGTATCAAAGAAGA+CGG | 0.633142 | 3.1:-48228022 | None:intergenic |
| AAGGCATCTCCTCTGAATTG+TGG | 0.636288 | 3.1:-48228385 | None:intergenic |
| TTTGAATATGATGTAGGTGA+AGG | 0.636602 | 3.1:-48227956 | None:intergenic |
| ATGGCAACTGAGGTAGCAGA+AGG | 0.642309 | 3.1:-48228469 | None:intergenic |
| TGGAACCAGATGCACCAGAA+GGG | 0.643509 | 3.1:+48227868 | MS.gene048605:CDS |
| ATCCTGCTCAATATAGAACA+AGG | 0.645051 | 3.1:+48227834 | MS.gene048605:CDS |
| AGGAAATGGGATATGAAGAG+AGG | 0.649200 | 3.1:+48227147 | MS.gene048605:CDS |
| GATGATGCTGATGGAGTCAA+AGG | 0.652271 | 3.1:-48228055 | None:intergenic |
| AAAATACATCTGGATCGTCG+AGG | 0.656511 | 3.1:-48228639 | None:intergenic |
| TTAATCAAACCAGTTTGACA+AGG | 0.662325 | 3.1:-48226963 | None:intergenic |
| ATGATCCTTTCCGAAACTCG+GGG | 0.664716 | 3.1:-48227757 | None:intergenic |
| GTTGATGTTAACCGAGAGTG+CGG | 0.666864 | 3.1:+48227239 | MS.gene048605:CDS |
| GTTCTGATGCATCTGCATTG+TGG | 0.668109 | 3.1:-48228302 | None:intergenic |
| AGAAACAGCACAACGAAGAG+CGG | 0.669641 | 3.1:-48227276 | None:intergenic |
| AGGCGAACATGAAGTCGATG+AGG | 0.683016 | 3.1:+48227091 | MS.gene048605:CDS |
| GATGCTGATGGAGTCAAAGG+TGG | 0.696337 | 3.1:-48228052 | None:intergenic |
| TTGAAGGGGATGAAAGACTG+AGG | 0.702792 | 3.1:-48228213 | None:intergenic |
| CGCCTGTGGCTGGAACCACG+TGG | 0.709879 | 3.1:+48228077 | MS.gene048605:CDS |
| GTGTCCATTTGTTCACCCGG+GGG | 0.714093 | 3.1:+48227682 | MS.gene048605:CDS |
| CTGAATCTGAGTCTGCCACG+TGG | 0.717188 | 3.1:-48228092 | None:intergenic |
| GATGCTTGTGAATATGCACA+CGG | 0.730998 | 3.1:+48227791 | MS.gene048605:CDS |
| GAACCAGTAGAAGCATACAA+CGG | 0.765075 | 3.1:-48227926 | None:intergenic |
| GCAGTGCCATAATCCCGACG+CGG | 0.838635 | 3.1:+48228744 | MS.gene048605:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAGTTTTTAAAGTTAGT+AGG | - | chr3.1:48228259-48228278 | None:intergenic | 15.0% |
| !!! | ACTAACTTTAAAAACTTTTT+CGG | + | chr3.1:48228259-48228278 | MS.gene048605:CDS | 15.0% |
| !! | TTGATTAAGGAAAATGAATA+TGG | + | chr3.1:48226978-48226997 | MS.gene048605:CDS | 20.0% |
| !!! | CTAACTTTAAAAACTTTTTC+GGG | + | chr3.1:48228260-48228279 | MS.gene048605:CDS | 20.0% |
| ! | ATGAGGAAATCTTATTCTTT+CGG | + | chr3.1:48228571-48228590 | MS.gene048605:CDS | 25.0% |
| ! | ATTGAAAACCTACTTGTTTA+AGG | - | chr3.1:48227493-48227512 | None:intergenic | 25.0% |
| ! | CTTACCAATTCAAATGTTAT+TGG | + | chr3.1:48228358-48228377 | MS.gene048605:CDS | 25.0% |
| ! | TATATCTCATTGTTTATGTC+AGG | - | chr3.1:48227587-48227606 | None:intergenic | 25.0% |
| ! | TATTGATCAAATTCCATTGT+TGG | - | chr3.1:48228706-48228725 | None:intergenic | 25.0% |
| ! | TGATCCAATAACATTTGAAT+TGG | - | chr3.1:48228365-48228384 | None:intergenic | 25.0% |
| !! | TAAACAAGTAGGTTTTCAAT+TGG | + | chr3.1:48227493-48227512 | MS.gene048605:CDS | 25.0% |
| !!! | ATTTTTAAGGCATGAATCTT+GGG | + | chr3.1:48228657-48228676 | MS.gene048605:CDS | 25.0% |
| !!! | TATTTTTAAGGCATGAATCT+TGG | + | chr3.1:48228656-48228675 | MS.gene048605:CDS | 25.0% |
| AATAGAAAACCTTGTCAAAC+TGG | + | chr3.1:48226954-48226973 | MS.gene048605:CDS | 30.0% | |
| AATGATATTTCCTTGGATCA+CGG | - | chr3.1:48227721-48227740 | None:intergenic | 30.0% | |
| GATGATTTCCTTAAACAAGT+AGG | + | chr3.1:48227482-48227501 | MS.gene048605:CDS | 30.0% | |
| GCAATGAACTCAATAAAATG+AGG | + | chr3.1:48228554-48228573 | MS.gene048605:CDS | 30.0% | |
| GGTGAATTTGAATATGATGT+AGG | - | chr3.1:48227965-48227984 | None:intergenic | 30.0% | |
| TCATGCCTTAAAAATACATC+TGG | - | chr3.1:48228652-48228671 | None:intergenic | 30.0% | |
| TTAATCAAACCAGTTTGACA+AGG | - | chr3.1:48226966-48226985 | None:intergenic | 30.0% | |
| TTTGAATATGATGTAGGTGA+AGG | - | chr3.1:48227959-48227978 | None:intergenic | 30.0% | |
| ! | AAGCAAAAGCTTGATAATCT+CGG | - | chr3.1:48227321-48227340 | None:intergenic | 30.0% |
| ! | TTTTATTGAGTTCATTGCAG+CGG | - | chr3.1:48228552-48228571 | None:intergenic | 30.0% |
| !! | ACGATCCAGATGTATTTTTA+AGG | + | chr3.1:48228644-48228663 | MS.gene048605:CDS | 30.0% |
| !! | TTGTCAAACTGGTTTGATTA+AGG | + | chr3.1:48226965-48226984 | MS.gene048605:CDS | 30.0% |
| ACTCTTTCAAGCCTATTTGA+AGG | - | chr3.1:48228232-48228251 | None:intergenic | 35.0% | |
| ATACTACAACCCATACTAGA+AGG | + | chr3.1:48227440-48227459 | MS.gene048605:CDS | 35.0% | |
| ATATAGAACAAGGCTTTGCA+AGG | + | chr3.1:48227844-48227863 | MS.gene048605:CDS | 35.0% | |
| ATCCTGCTCAATATAGAACA+AGG | + | chr3.1:48227834-48227853 | MS.gene048605:CDS | 35.0% | |
| CAGGTGTAATGATATTTCCT+TGG | - | chr3.1:48227728-48227747 | None:intergenic | 35.0% | |
| CCAGTTATCATTCACATCAA+TGG | - | chr3.1:48227366-48227385 | None:intergenic | 35.0% | |
| CCATTGATGTGAATGATAAC+TGG | + | chr3.1:48227363-48227382 | MS.gene048605:CDS | 35.0% | |
| CTCATTGTTTATGTCAGGTA+GGG | - | chr3.1:48227582-48227601 | None:intergenic | 35.0% | |
| CTCTTTCAAGCCTATTTGAA+GGG | - | chr3.1:48228231-48228250 | None:intergenic | 35.0% | |
| GCAGATTGTATCAAAGAAGA+CGG | - | chr3.1:48228025-48228044 | None:intergenic | 35.0% | |
| GGTGTGTTGTCTTATATTCT+CGG | + | chr3.1:48227206-48227225 | MS.gene048605:CDS | 35.0% | |
| TAATCTTTCTTCTCAGTTCG+AGG | - | chr3.1:48227545-48227564 | None:intergenic | 35.0% | |
| TCGGTATCTAGTAGTATCTT+CGG | + | chr3.1:48227404-48227423 | MS.gene048605:CDS | 35.0% | |
| TCTCATTGTTTATGTCAGGT+AGG | - | chr3.1:48227583-48227602 | None:intergenic | 35.0% | |
| TCTTTCAAGCCTATTTGAAG+GGG | - | chr3.1:48228230-48228249 | None:intergenic | 35.0% | |
| TTCACAGATGCTGTTGAAAA+AGG | + | chr3.1:48227071-48227090 | MS.gene048605:CDS | 35.0% | |
| TTGGGTTAATTCTCTTGTGA+AGG | + | chr3.1:48228675-48228694 | MS.gene048605:CDS | 35.0% | |
| ! | ACAAGTAGGTTTTCAATTGG+TGG | + | chr3.1:48227496-48227515 | MS.gene048605:CDS | 35.0% |
| !! | GCAGTTTTCAATCTGTTTCT+CGG | - | chr3.1:48228148-48228167 | None:intergenic | 35.0% |
| AAAATACATCTGGATCGTCG+AGG | - | chr3.1:48228642-48228661 | None:intergenic | 40.0% | |
| AAGTCGATGAGGTAGGATTA+TGG | + | chr3.1:48227102-48227121 | MS.gene048605:CDS | 40.0% | |
| AATAAGGCAGCAACCATAAG+AGG | - | chr3.1:48227176-48227195 | None:intergenic | 40.0% | |
| AGCAAAAAAGCAAACCCTTC+TGG | - | chr3.1:48227885-48227904 | None:intergenic | 40.0% | |
| AGGAAATGGGATATGAAGAG+AGG | + | chr3.1:48227147-48227166 | MS.gene048605:CDS | 40.0% | |
| AGGATTATGGTATGGAAGGA+GGG | + | chr3.1:48227115-48227134 | MS.gene048605:CDS | 40.0% | |
| AGGTAGGATTATGGTATGGA+AGG | + | chr3.1:48227111-48227130 | MS.gene048605:CDS | 40.0% | |
| ATCATCTACGCCTTCTAGTA+TGG | - | chr3.1:48227453-48227472 | None:intergenic | 40.0% | |
| ATTGGATCACCACAATTCAG+AGG | + | chr3.1:48228376-48228395 | MS.gene048605:CDS | 40.0% | |
| CAAGGGCTTATTCTCATGAT+TGG | + | chr3.1:48227654-48227673 | MS.gene048605:CDS | 40.0% | |
| CTAGTAGTATCTTCGGTTCA+AGG | + | chr3.1:48227411-48227430 | MS.gene048605:CDS | 40.0% | |
| GAATGCCATTACGTCATCTT+CGG | - | chr3.1:48227054-48227073 | None:intergenic | 40.0% | |
| GATGAGGTAGGATTATGGTA+TGG | + | chr3.1:48227107-48227126 | MS.gene048605:CDS | 40.0% | |
| GATGCTTGTGAATATGCACA+CGG | + | chr3.1:48227791-48227810 | MS.gene048605:CDS | 40.0% | |
| GTATCTTCGGTTCAAGGAAT+AGG | + | chr3.1:48227417-48227436 | MS.gene048605:CDS | 40.0% | |
| GTCTTTCATCCCCTTCAAAT+AGG | + | chr3.1:48228218-48228237 | MS.gene048605:CDS | 40.0% | |
| TAGGATTATGGTATGGAAGG+AGG | + | chr3.1:48227114-48227133 | MS.gene048605:CDS | 40.0% | |
| TCATCTACGCCTTCTAGTAT+GGG | - | chr3.1:48227452-48227471 | None:intergenic | 40.0% | |
| TGAGAATAAGCCCTTGAACA+AGG | - | chr3.1:48227650-48227669 | None:intergenic | 40.0% | |
| TTCACCTAGTGCTTCTTCAA+TGG | + | chr3.1:48227979-48227998 | MS.gene048605:CDS | 40.0% | |
| TTGAAAACTGCACTGAATGC+TGG | + | chr3.1:48228157-48228176 | MS.gene048605:CDS | 40.0% | |
| TTGTTTATGTCAGGTAGGGA+TGG | - | chr3.1:48227578-48227597 | None:intergenic | 40.0% | |
| ! | CTTATGGTTGCTGCCTTATT+TGG | + | chr3.1:48227176-48227195 | MS.gene048605:CDS | 40.0% |
| ! | GAACCAGTAGAAGCATACAA+CGG | - | chr3.1:48227929-48227948 | None:intergenic | 40.0% |
| ! | GACCAGTCTAATTTTCCATC+AGG | - | chr3.1:48228526-48228545 | None:intergenic | 40.0% |
| ! | TTTGCCAGAGCATTTGTACA+TGG | + | chr3.1:48228774-48228793 | MS.gene048605:CDS | 40.0% |
| !! | AGCCTTGTTCTATATTGAGC+AGG | - | chr3.1:48227839-48227858 | None:intergenic | 40.0% |
| !! | CAAAGTGAAGCCTTGTTCAA+GGG | + | chr3.1:48227637-48227656 | MS.gene048605:CDS | 40.0% |
| !! | CACACGGTATTTTTGAATGC+TGG | + | chr3.1:48227807-48227826 | MS.gene048605:CDS | 40.0% |
| !! | GAATCCATTGAAGAAGCACT+AGG | - | chr3.1:48227986-48228005 | None:intergenic | 40.0% |
| !! | TCAAAGTGAAGCCTTGTTCA+AGG | + | chr3.1:48227636-48227655 | MS.gene048605:CDS | 40.0% |
| !!! | CTTTTTTGCTCACAAACCAG+AGG | + | chr3.1:48227895-48227914 | MS.gene048605:CDS | 40.0% |
| AACGCAAACCAGCAACTTTG+GGG | + | chr3.1:48228322-48228341 | MS.gene048605:CDS | 45.0% | |
| AGAAACAGCACAACGAAGAG+CGG | - | chr3.1:48227279-48227298 | None:intergenic | 45.0% | |
| AGAACAAGGCTTTGCAAGGA+TGG | + | chr3.1:48227848-48227867 | MS.gene048605:CDS | 45.0% | |
| AGAACGCAAACCAGCAACTT+TGG | + | chr3.1:48228320-48228339 | MS.gene048605:CDS | 45.0% | |
| AGAGAAAGTAGAAGGCTCCA+TGG | - | chr3.1:48228491-48228510 | None:intergenic | 45.0% | |
| AGCCTTCTACTTTCTCTGGT+TGG | + | chr3.1:48228494-48228513 | MS.gene048605:CDS | 45.0% | |
| AGGGTTGGATCGAAGGAAAT+GGG | + | chr3.1:48227134-48227153 | MS.gene048605:CDS | 45.0% | |
| ATGATCCTTTCCGAAACTCG+GGG | - | chr3.1:48227760-48227779 | None:intergenic | 45.0% | |
| ATGGAGCCTTCTACTTTCTC+TGG | + | chr3.1:48228490-48228509 | MS.gene048605:CDS | 45.0% | |
| ATTGAGTTCATTGCAGCGGA+TGG | - | chr3.1:48228548-48228567 | None:intergenic | 45.0% | |
| CACACCCTTGCTTCCAAATA+AGG | - | chr3.1:48227192-48227211 | None:intergenic | 45.0% | |
| CATGATCCTTTCCGAAACTC+GGG | - | chr3.1:48227761-48227780 | None:intergenic | 45.0% | |
| CCTTCTACTTTCTCTGGTTG+GGG | + | chr3.1:48228496-48228515 | MS.gene048605:CDS | 45.0% | |
| CGCCTGATGGAAAATTAGAC+TGG | + | chr3.1:48228521-48228540 | MS.gene048605:CDS | 45.0% | |
| CTTTATTGAGCGCAGTAGCA+TGG | + | chr3.1:48228426-48228445 | MS.gene048605:CDS | 45.0% | |
| GAACATGAAGTCGATGAGGT+AGG | + | chr3.1:48227095-48227114 | MS.gene048605:CDS | 45.0% | |
| GAACGCAAACCAGCAACTTT+GGG | + | chr3.1:48228321-48228340 | MS.gene048605:CDS | 45.0% | |
| GATGATGCTGATGGAGTCAA+AGG | - | chr3.1:48228058-48228077 | None:intergenic | 45.0% | |
| GCATGATCCTTTCCGAAACT+CGG | - | chr3.1:48227762-48227781 | None:intergenic | 45.0% | |
| GCCTTCTACTTTCTCTGGTT+GGG | + | chr3.1:48228495-48228514 | MS.gene048605:CDS | 45.0% | |
| GTTCTGATGCATCTGCATTG+TGG | - | chr3.1:48228305-48228324 | None:intergenic | 45.0% | |
| GTTGATGTTAACCGAGAGTG+CGG | + | chr3.1:48227239-48227258 | MS.gene048605:CDS | 45.0% | |
| TCAGGTAGGGATGGATCAAT+CGG | - | chr3.1:48227569-48227588 | None:intergenic | 45.0% | |
| TGAAGAGAGGACACCTCTTA+TGG | + | chr3.1:48227160-48227179 | MS.gene048605:CDS | 45.0% | |
| TGATGCATCTGCATTGTGGT+CGG | - | chr3.1:48228301-48228320 | None:intergenic | 45.0% | |
| TGCTCCATGTACAAATGCTC+TGG | - | chr3.1:48228781-48228800 | None:intergenic | 45.0% | |
| TGTGAAGGATGCTCCAACAA+TGG | + | chr3.1:48228690-48228709 | MS.gene048605:CDS | 45.0% | |
| TTATGGTATGGAAGGAGGGT+TGG | + | chr3.1:48227119-48227138 | MS.gene048605:CDS | 45.0% | |
| TTCAGCCGAAGATGACGTAA+TGG | + | chr3.1:48227046-48227065 | MS.gene048605:CDS | 45.0% | |
| TTGAAGGGGATGAAAGACTG+AGG | - | chr3.1:48228216-48228235 | None:intergenic | 45.0% | |
| ! | AAGGCATCTCCTCTGAATTG+TGG | - | chr3.1:48228388-48228407 | None:intergenic | 45.0% |
| ! | ATCTGTTTCTCGGCATCTGA+AGG | - | chr3.1:48228138-48228157 | None:intergenic | 45.0% |
| ! | GTGCAACGACTTGTTTGTCT+CGG | + | chr3.1:48227385-48227404 | MS.gene048605:CDS | 45.0% |
| ! | TCTGTTTCTCGGCATCTGAA+GGG | - | chr3.1:48228137-48228156 | None:intergenic | 45.0% |
| !! | GCTGCCTTATTTGGAAGCAA+GGG | + | chr3.1:48227185-48227204 | MS.gene048605:CDS | 45.0% |
| !! | TGCTGCCTTATTTGGAAGCA+AGG | + | chr3.1:48227184-48227203 | MS.gene048605:CDS | 45.0% |
| AATGACAGCCCCAAAGTTGC+TGG | - | chr3.1:48228333-48228352 | None:intergenic | 50.0% | |
| AGGCGAACATGAAGTCGATG+AGG | + | chr3.1:48227091-48227110 | MS.gene048605:CDS | 50.0% | |
| AGTGTCCATTTGTTCACCCG+GGG | + | chr3.1:48227681-48227700 | MS.gene048605:CDS | 50.0% | |
| ATGGAACCAGATGCACCAGA+AGG | + | chr3.1:48227867-48227886 | MS.gene048605:CDS | 50.0% | |
| ATGGCAACTGAGGTAGCAGA+AGG | - | chr3.1:48228472-48228491 | None:intergenic | 50.0% | |
| CCCCAACCAGAGAAAGTAGA+AGG | - | chr3.1:48228499-48228518 | None:intergenic | 50.0% | |
| CGACCGTTGTATGCTTCTAC+TGG | + | chr3.1:48227923-48227942 | MS.gene048605:CDS | 50.0% | |
| CGAGTGTCCATTTGTTCACC+CGG | + | chr3.1:48227679-48227698 | MS.gene048605:CDS | 50.0% | |
| CGGAAAGGATCATGCAGCAA+AGG | + | chr3.1:48227767-48227786 | MS.gene048605:CDS | 50.0% | |
| CGGGTGAACAAATGGACACT+CGG | - | chr3.1:48227681-48227700 | None:intergenic | 50.0% | |
| GAGGGTTGGATCGAAGGAAA+TGG | + | chr3.1:48227133-48227152 | MS.gene048605:CDS | 50.0% | |
| GAGTGTCCATTTGTTCACCC+GGG | + | chr3.1:48227680-48227699 | MS.gene048605:CDS | 50.0% | |
| GATGCTGATGGAGTCAAAGG+TGG | - | chr3.1:48228055-48228074 | None:intergenic | 50.0% | |
| TCGGTTAACATCAACGCGAC+TGG | - | chr3.1:48227234-48227253 | None:intergenic | 50.0% | |
| TGGAACCAGATGCACCAGAA+GGG | + | chr3.1:48227868-48227887 | MS.gene048605:CDS | 50.0% | |
| TTCTCGGCATCTGAAGGGTT+GGG | - | chr3.1:48228132-48228151 | None:intergenic | 50.0% | |
| TTCTGCTACCTCAGTTGCCA+TGG | + | chr3.1:48228471-48228490 | MS.gene048605:CDS | 50.0% | |
| TTTCTCGGCATCTGAAGGGT+TGG | - | chr3.1:48228133-48228152 | None:intergenic | 50.0% | |
| ! | TTTTCCCCCGGGTGAACAAA+TGG | - | chr3.1:48227689-48227708 | None:intergenic | 50.0% |
| !! | GCTCTCGCTTTGCTTTGAGA+AGG | - | chr3.1:48228407-48228426 | None:intergenic | 50.0% |
| !! | GCTCTTCGTTGTGCTGTTTC+TGG | + | chr3.1:48227278-48227297 | MS.gene048605:CDS | 50.0% |
| ACAGAACCGCGTCGGGATTA+TGG | - | chr3.1:48228753-48228772 | None:intergenic | 55.0% | |
| AGAAGGCTCCATGGCAACTG+AGG | - | chr3.1:48228482-48228501 | None:intergenic | 55.0% | |
| CTGAATCTGAGTCTGCCACG+TGG | - | chr3.1:48228095-48228114 | None:intergenic | 55.0% | |
| CTTTCCGAAACTCGGGGCAA+GGG | - | chr3.1:48227754-48227773 | None:intergenic | 55.0% | |
| GATGGAGTCAAAGGTGGCGT+TGG | - | chr3.1:48228049-48228068 | None:intergenic | 55.0% | |
| GCAAACCCTTCTGGTGCATC+TGG | - | chr3.1:48227876-48227895 | None:intergenic | 55.0% | |
| GTGGAGCAGCAACACGATGT+AGG | + | chr3.1:48227515-48227534 | MS.gene048605:CDS | 55.0% | |
| GTGTCCATTTGTTCACCCGG+GGG | + | chr3.1:48227682-48227701 | MS.gene048605:CDS | 55.0% | |
| TACAACGGTCGAAGCTCCTC+TGG | - | chr3.1:48227914-48227933 | None:intergenic | 55.0% | |
| TCCATCAGCATCATCGCCTG+TGG | + | chr3.1:48228063-48228082 | MS.gene048605:CDS | 55.0% | |
| TGGAAGGAGGGTTGGATCGA+AGG | + | chr3.1:48227127-48227146 | MS.gene048605:CDS | 55.0% | |
| TGGCAAAGACAGAACCGCGT+CGG | - | chr3.1:48228761-48228780 | None:intergenic | 55.0% | |
| AAACTCGGGGCAAGGGACAC+AGG | - | chr3.1:48227747-48227766 | None:intergenic | 60.0% | |
| CCCTATCTGAGCCGCACTCT+CGG | - | chr3.1:48227253-48227272 | None:intergenic | 60.0% | |
| CCTTGCCCCGAGTTTCGGAA+AGG | + | chr3.1:48227752-48227771 | MS.gene048605:CDS | 60.0% | |
| CCTTTCCGAAACTCGGGGCA+AGG | - | chr3.1:48227755-48227774 | None:intergenic | 60.0% | |
| GCAGTGCCATAATCCCGACG+CGG | + | chr3.1:48228744-48228763 | MS.gene048605:CDS | 60.0% | |
| GCCACAGGCGATGATGCTGA+TGG | - | chr3.1:48228067-48228086 | None:intergenic | 60.0% | |
| GGCAAAGACAGAACCGCGTC+GGG | - | chr3.1:48228760-48228779 | None:intergenic | 60.0% | |
| GTGTCCCTTGCCCCGAGTTT+CGG | + | chr3.1:48227747-48227766 | MS.gene048605:CDS | 60.0% | |
| TCAGCATCATCGCCTGTGGC+TGG | + | chr3.1:48228067-48228086 | MS.gene048605:CDS | 60.0% | |
| TTCACCCGGGGGAAAACGCA+AGG | + | chr3.1:48227693-48227712 | MS.gene048605:CDS | 60.0% | |
| ! | ACCGAGAGTGCGGCTCAGAT+AGG | + | chr3.1:48227249-48227268 | MS.gene048605:CDS | 60.0% |
| ! | CCGAGAGTGCGGCTCAGATA+GGG | + | chr3.1:48227250-48227269 | MS.gene048605:CDS | 60.0% |
| TCTGGTTGGGGCTCGCCTGA+TGG | + | chr3.1:48228508-48228527 | MS.gene048605:CDS | 65.0% | |
| TGCCACGTGGTTCCAGCCAC+AGG | - | chr3.1:48228082-48228101 | None:intergenic | 65.0% | |
| !! | ACGCAAGGCGCCGTGATCCA+AGG | + | chr3.1:48227708-48227727 | MS.gene048605:CDS | 65.0% |
| CGCCTGTGGCTGGAACCACG+TGG | + | chr3.1:48228077-48228096 | MS.gene048605:CDS | 70.0% | |
| ! | CGGCGCCTTGCGTTTTCCCC+CGG | - | chr3.1:48227701-48227720 | None:intergenic | 70.0% |
| ! | GGCGCCTTGCGTTTTCCCCC+GGG | - | chr3.1:48227700-48227719 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 48226939 | 48228804 | 48226939 | ID=MS.gene048605 |
| chr3.1 | mRNA | 48226939 | 48228804 | 48226939 | ID=MS.gene048605.t1;Parent=MS.gene048605 |
| chr3.1 | exon | 48226939 | 48228804 | 48226939 | ID=MS.gene048605.t1.exon1;Parent=MS.gene048605.t1 |
| chr3.1 | CDS | 48226939 | 48228804 | 48226939 | ID=cds.MS.gene048605.t1;Parent=MS.gene048605.t1 |
| Gene Sequence |
| Protein sequence |
