AlfalfaGEDB | MS.gene048680

M. sativa cultivar XinJiangDaYe / MS.gene048680

KEGG: -
GO: GO:0000976 GO:0000981 GO:0000987 GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0005515 GO:0006355 GO:0006357 GO:0008150 GO:0009889 GO:0009891 GO:0009893 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0035326 GO:0043565 GO:0044212 GO:0045893 GO:0045935 GO:0045944 GO:0046983 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1902680 GO:1903506 GO:1903508 GO:1990837 GO:2000112 GO:2001141
PFAM: PF00319.21

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene048680.t1	XP_024635654.1	93	242	14	1	1	239	1	242	4.90E-119	437.2

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene048680.t1	Q9FJK3	63.3	177	65	0	1	177	1	177	5.1e-56	219.2

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene048680.t1	G7J8R0	93.0	242	14	1	1	239	1	242	3.6e-119	437.2

TFs/TRs:

Gene ID	Type	Classification
MS.gene048680.t1	TF	MADS-M-type

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene048680.t1	MTR_3g065100	96.281	242	6	1	1	239	1	242	2.51e-174	479
MS.gene048680.t1	MTR_3g466980	54.357	241	83	4	1	234	1	221	7.42e-83	246
MS.gene048680.t1	MTR_8g036130	57.143	245	94	6	1	235	1	244	3.54e-80	241
MS.gene048680.t1	MTR_4g032620	50.847	236	107	4	1	235	1	228	7.35e-77	232
MS.gene048680.t1	MTR_4g031910	49.794	243	97	6	1	235	1	226	3.24e-65	202
MS.gene048680.t1	MTR_4g032290	50.617	243	97	6	1	235	1	228	9.58e-60	188
MS.gene048680.t1	MTR_3g466830	51.899	158	76	0	3	160	2	159	5.52e-55	174
MS.gene048680.t1	MTR_4g032260	61.290	155	59	1	1	154	1	155	4.42e-54	171
MS.gene048680.t1	MTR_4g063790	51.220	164	79	1	1	163	1	164	1.24e-52	168
MS.gene048680.t1	MTR_2g035610	68.033	122	39	0	1	122	1	122	6.30e-52	164
MS.gene048680.t1	MTR_3g466890	49.682	157	79	0	3	159	2	158	4.54e-49	159
MS.gene048680.t1	MTR_3g467080	49.032	155	78	1	1	154	1	155	1.35e-48	157
MS.gene048680.t1	MTR_5g047580	50.000	156	77	1	1	156	1	155	1.56e-46	152
MS.gene048680.t1	MTR_5g075380	42.593	162	93	0	1	162	1	162	6.66e-46	150
MS.gene048680.t1	MTR_3g031100	41.341	179	100	2	1	178	1	175	1.68e-43	147
MS.gene048680.t1	MTR_2g016210	41.294	201	106	3	1	197	1	193	2.80e-42	144
MS.gene048680.t1	MTR_1g077390	46.497	157	83	1	1	157	1	156	5.58e-42	140
MS.gene048680.t1	MTR_7g011950	50.955	157	76	1	1	157	1	156	2.27e-41	139
MS.gene048680.t1	MTR_1g090697	42.949	156	88	1	1	156	1	155	8.37e-41	137
MS.gene048680.t1	MTR_1g084950	50.000	156	77	1	1	156	1	155	6.19e-40	135
MS.gene048680.t1	MTR_1g077320	50.318	157	77	1	1	157	1	156	8.39e-40	135
MS.gene048680.t1	MTR_3g031240	40.123	162	96	1	1	161	1	162	2.93e-39	134
MS.gene048680.t1	MTR_4g028720	48.408	157	80	1	1	157	1	156	6.95e-38	130
MS.gene048680.t1	MTR_1g090710	40.127	157	92	2	1	156	1	156	7.43e-37	127
MS.gene048680.t1	MTR_1g090783	41.558	154	89	1	3	156	2	154	1.03e-36	127
MS.gene048680.t1	MTR_3g466900	45.312	128	70	0	32	159	2	129	3.32e-36	125
MS.gene048680.t1	MTR_3g465410	46.923	130	68	1	29	157	1	130	3.83e-36	125
MS.gene048680.t1	MTR_2g035580	43.506	154	87	0	1	154	1	154	1.04e-35	124
MS.gene048680.t1	MTR_1g077300	48.408	157	78	2	1	157	1	154	1.27e-34	121
MS.gene048680.t1	MTR_3g466930	45.312	128	70	0	32	159	2	129	1.94e-34	120
MS.gene048680.t1	MTR_5g047560	41.026	156	75	2	1	156	1	139	1.16e-30	110
MS.gene048680.t1	MTR_7g055800	47.899	119	34	2	1	119	1	91	1.59e-28	103
MS.gene048680.t1	MTR_4g028800	69.444	72	20	1	1	72	1	70	3.49e-28	102
MS.gene048680.t1	MTR_7g055790	51.351	111	36	1	1	111	59	151	8.62e-26	99.0
MS.gene048680.t1	MTR_4g084780	94.000	50	3	0	74	123	1	50	2.27e-25	97.8
MS.gene048680.t1	MTR_6g018920	29.630	243	133	9	1	233	1	215	2.73e-24	99.4
MS.gene048680.t1	MTR_4g019670	38.462	117	72	0	3	119	6	122	1.09e-23	99.4
MS.gene048680.t1	MTR_7g106510	38.525	122	72	1	1	119	1	122	3.85e-23	97.8
MS.gene048680.t1	MTR_7g055940	45.283	106	30	2	1	106	1	78	4.02e-22	87.0
MS.gene048680.t1	MTR_1g114730	27.049	244	140	8	1	234	1	216	3.78e-20	87.8
MS.gene048680.t1	MTR_3g093900	27.564	156	113	0	3	158	6	161	4.93e-20	89.0
MS.gene048680.t1	MTR_6g005450	26.749	243	142	9	1	234	1	216	1.16e-19	86.7
MS.gene048680.t1	MTR_2g035590	50.562	89	43	1	74	161	1	89	2.31e-19	80.5
MS.gene048680.t1	MTR_6g005440	26.087	184	120	5	1	178	1	174	1.13e-15	75.1
MS.gene048680.t1	MTR_2g049610	24.686	239	165	7	1	237	1	226	2.10e-12	65.1
MS.gene048680.t1	MTR_4g045977	24.623	199	132	5	1	189	1	191	3.63e-12	65.5
MS.gene048680.t1	MTR_4g107170	26.627	169	113	4	1	166	1	161	1.40e-11	62.8
MS.gene048680.t1	MTR_2g085250	27.615	239	147	10	3	226	10	237	7.89e-11	60.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene048680.t1	AT5G48670	56.164	219	83	3	1	206	1	219	3.25e-70	218
MS.gene048680.t1	AT1G65300	43.678	174	98	0	3	176	2	175	1.16e-50	166
MS.gene048680.t1	AT1G65330	47.222	180	93	1	3	180	2	181	4.00e-50	165
MS.gene048680.t1	AT3G05860	44.505	182	96	2	1	177	1	182	4.09e-48	159
MS.gene048680.t1	AT3G05860	51.007	149	73	0	1	149	1	149	4.93e-48	157
MS.gene048680.t1	AT5G26630	47.120	191	99	2	1	191	1	189	8.54e-48	157
MS.gene048680.t1	AT3G05860	41.709	199	111	2	1	194	1	199	1.21e-47	158
MS.gene048680.t1	AT5G26650	44.654	159	88	0	4	162	2	160	1.44e-43	150
MS.gene048680.t1	AT5G27960	44.025	159	89	0	4	162	2	160	1.36e-42	147
MS.gene048680.t1	AT1G31630	42.405	158	90	1	3	160	2	158	1.19e-41	145
MS.gene048680.t1	AT5G27810	66.667	93	31	0	29	121	1	93	5.28e-40	134
MS.gene048680.t1	AT1G31640	41.875	160	92	1	3	162	2	160	7.05e-39	140
MS.gene048680.t1	AT2G28700	35.135	185	111	4	1	179	1	182	6.06e-34	124
MS.gene048680.t1	AT5G26580	39.375	160	83	1	1	160	1	146	5.07e-32	120
MS.gene048680.t1	AT1G22590	35.714	154	96	1	1	154	1	151	2.43e-26	100
MS.gene048680.t1	AT2G40210	43.902	123	69	0	1	123	1	123	5.86e-24	99.0
MS.gene048680.t1	AT5G06500	37.815	119	74	0	1	119	1	119	1.53e-21	90.1
MS.gene048680.t1	AT5G55690	28.846	208	112	4	1	187	1	193	5.36e-18	81.3
MS.gene048680.t1	AT5G55690	28.846	208	112	4	1	187	1	193	5.36e-18	81.3
MS.gene048680.t1	AT5G58890	30.625	160	96	3	1	154	1	151	1.31e-13	69.3
MS.gene048680.t1	AT1G77950	37.895	95	58	1	1	95	1	94	4.89e-11	61.2
MS.gene048680.t1	AT1G77950	37.895	95	58	1	1	95	1	94	4.89e-11	61.2
MS.gene048680.t1	AT1G77950	37.895	95	58	1	1	95	1	94	4.89e-11	61.2
MS.gene048680.t1	AT1G77950	37.895	95	58	1	1	95	1	94	4.89e-11	61.2
MS.gene048680.t1	AT1G59930	34.211	114	64	3	84	192	1	108	5.53e-11	58.9
MS.gene048680.t1	AT5G35120	32.967	91	61	0	84	174	1	91	6.46e-11	58.2

Find 55 sgRNAs with CRISPR-Local

Find 67 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCTATTATCCTTTCTTTGTT+TGG	0.241148	3.2:+60522272	None:intergenic
TGTCCATTCTCTTCAATCTT+AGG	0.274749	3.2:+60522039	None:intergenic
GATTTGGCCAAAACCCATTT+GGG	0.290435	3.2:+60521893	None:intergenic
TTTATGAACTTGATGAATAA+TGG	0.322309	3.2:-60521955	MS.gene048680:CDS
ATGCTTATATTGTGCATAAC+TGG	0.326699	3.2:+60522204	None:intergenic
GAAGAAAGGTCTAATGAAAA+AGG	0.328619	3.2:-60522505	MS.gene048680:CDS
CATGGTTGATTTGAATGATA+TGG	0.333296	3.2:-60522184	MS.gene048680:CDS
GAGTCATGGTCAACATGTTT+TGG	0.338044	3.2:-60522013	MS.gene048680:CDS
GGATTTGGCCAAAACCCATT+TGG	0.342692	3.2:+60521892	None:intergenic
GAGGTTTGGCCGTCTCCTTT+AGG	0.389676	3.2:-60522411	MS.gene048680:CDS
TGGGGATCAGGCACCTCCTA+TGG	0.395072	3.2:-60521929	MS.gene048680:CDS
GAATAATGGTGGTGGGGATC+AGG	0.411629	3.2:-60521941	MS.gene048680:CDS
AATGGTCGTAGCACCAACTA+TGG	0.416139	3.2:-60522076	MS.gene048680:CDS
ACCTCTGGTTGAGGATCATA+AGG	0.423494	3.2:+60522429	None:intergenic
ATGATCCTCAACCAGAGGTT+TGG	0.426927	3.2:-60522425	MS.gene048680:CDS
AGTATTTGAAAGATATCAAT+AGG	0.431729	3.2:-60522146	MS.gene048680:CDS
AAAGGAGACGGCCAAACCTC+TGG	0.476094	3.2:+60522414	None:intergenic
GTCTCCTTTAGGAGTTCAAA+GGG	0.477655	3.2:-60522400	MS.gene048680:CDS
CGTCTCCTTTAGGAGTTCAA+AGG	0.479690	3.2:-60522401	MS.gene048680:CDS
GGAAGGCAACATTCAAGAAA+AGG	0.489208	3.2:-60522527	MS.gene048680:CDS
TCAATTGACCAAACAAAGAA+AGG	0.490968	3.2:-60522280	MS.gene048680:CDS
GCACCAACTATGGTGGCTAA+TGG	0.492096	3.2:-60522066	MS.gene048680:CDS
TTTGAGGCAGCGGATTCAAA+AGG	0.492900	3.2:-60522310	MS.gene048680:CDS
GGAGGGTTGAAATGTTGAGC+AGG	0.493102	3.2:-60522125	MS.gene048680:CDS
CTACCTAAGATTGAAGAGAA+TGG	0.512642	3.2:-60522042	MS.gene048680:CDS
AGGTCAAGGTCAAACTCAAA+TGG	0.513312	3.2:-60522094	MS.gene048680:CDS
AGCACCCTTTGAACTCCTAA+AGG	0.514637	3.2:+60522396	None:intergenic
GTTGAAATGTTGAGCAGGAA+TGG	0.522645	3.2:-60522120	MS.gene048680:CDS
GGGGATCAGGCACCTCCTAT+GGG	0.527561	3.2:-60521928	MS.gene048680:CDS
AATCAACGACTCTGCGAGGA+AGG	0.536639	3.2:-60522544	MS.gene048680:CDS
AGTCCATTAGCCACCATAGT+TGG	0.539716	3.2:+60522063	None:intergenic
TTTGAAAGATATCAATAGGA+GGG	0.549226	3.2:-60522142	MS.gene048680:CDS
AACTTGATGAATAATGGTGG+TGG	0.552012	3.2:-60521949	MS.gene048680:CDS
AGCAGGAATGGTCAAGGTCA+AGG	0.553703	3.2:-60522108	MS.gene048680:CDS
GAGAATGGACAAGGGAGTCA+TGG	0.556512	3.2:-60522027	MS.gene048680:CDS
ACATTCAAGAAAAGGAAGAA+AGG	0.560908	3.2:-60522519	MS.gene048680:CDS
GACGGCCAAACCTCTGGTTG+AGG	0.565198	3.2:+60522420	None:intergenic
GGATTGACATTTCCCATAGG+AGG	0.571905	3.2:+60521916	None:intergenic
ATTTGGCCAAAACCCATTTG+GGG	0.587386	3.2:+60521894	None:intergenic
TTTGGCCAAAACCCATTTGG+GGG	0.595235	3.2:+60521895	None:intergenic
ATTTGAAAGATATCAATAGG+AGG	0.602830	3.2:-60522143	MS.gene048680:CDS
TCCTTATGATCCTCAACCAG+AGG	0.603338	3.2:-60522430	MS.gene048680:CDS
GCATAACTGGATCAGCACTA+AGG	0.605501	3.2:+60522217	None:intergenic
AAGATTGAAGAGAATGGACA+AGG	0.608283	3.2:-60522036	MS.gene048680:CDS
ACTTGATGAATAATGGTGGT+GGG	0.616834	3.2:-60521948	MS.gene048680:CDS
ATGAACTTGATGAATAATGG+TGG	0.624781	3.2:-60521952	MS.gene048680:CDS
AGTGAACTCAGTACTCTATG+TGG	0.630043	3.2:-60522480	MS.gene048680:CDS
CTTGATGAATAATGGTGGTG+GGG	0.636670	3.2:-60521947	MS.gene048680:CDS
CTTTGAACTCCTAAAGGAGA+CGG	0.641014	3.2:+60522402	None:intergenic
AGTTATGCACAATATAAGCA+TGG	0.643634	3.2:-60522202	MS.gene048680:CDS
TTGATTTGAATGATATGGCA+TGG	0.644556	3.2:-60522179	MS.gene048680:CDS
ATGTTGAGCAGGAATGGTCA+AGG	0.649347	3.2:-60522114	MS.gene048680:CDS
GGTCGTAGCACCAACTATGG+TGG	0.652064	3.2:-60522073	MS.gene048680:CDS
TCATAATCAACGACTCTGCG+AGG	0.671801	3.2:-60522548	MS.gene048680:CDS
AGATTGAAGAGAATGGACAA+GGG	0.691703	3.2:-60522035	MS.gene048680:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AGTATTTGAAAGATATCAAT+AGG	-	chr3.2:60522309-60522328	MS.gene048680:CDS	20.0%
!!	TTTATGAACTTGATGAATAA+TGG	-	chr3.2:60522500-60522519	MS.gene048680:CDS	20.0%
!	ATTTGAAAGATATCAATAGG+AGG	-	chr3.2:60522312-60522331	MS.gene048680:CDS	25.0%
!	TCTATTATCCTTTCTTTGTT+TGG	+	chr3.2:60522186-60522205	None:intergenic	25.0%
!	TTTGAAAGATATCAATAGGA+GGG	-	chr3.2:60522313-60522332	MS.gene048680:CDS	25.0%
	ACATTCAAGAAAAGGAAGAA+AGG	-	chr3.2:60521936-60521955	MS.gene048680:CDS	30.0%
	AGTTATGCACAATATAAGCA+TGG	-	chr3.2:60522253-60522272	MS.gene048680:CDS	30.0%
	ATGAACTTGATGAATAATGG+TGG	-	chr3.2:60522503-60522522	MS.gene048680:CDS	30.0%
	ATGCTTATATTGTGCATAAC+TGG	+	chr3.2:60522254-60522273	None:intergenic	30.0%
	ATTGGAACAAAGCAAAAAGA+TGG	-	chr3.2:60522106-60522125	MS.gene048680:CDS	30.0%
	GAAGAAAGGTCTAATGAAAA+AGG	-	chr3.2:60521950-60521969	MS.gene048680:CDS	30.0%
	TCAATTGACCAAACAAAGAA+AGG	-	chr3.2:60522175-60522194	MS.gene048680:CDS	30.0%
!	TTGATTTGAATGATATGGCA+TGG	-	chr3.2:60522276-60522295	MS.gene048680:CDS	30.0%
!!	CATGGTTGATTTGAATGATA+TGG	-	chr3.2:60522271-60522290	MS.gene048680:CDS	30.0%
!!	TTTTTGCTTTGTTCCAATTC+AGG	+	chr3.2:60522104-60522123	None:intergenic	30.0%
	AACTTGATGAATAATGGTGG+TGG	-	chr3.2:60522506-60522525	MS.gene048680:CDS	35.0%
	AAGATTGAAGAGAATGGACA+AGG	-	chr3.2:60522419-60522438	MS.gene048680:CDS	35.0%
	ACTTGATGAATAATGGTGGT+GGG	-	chr3.2:60522507-60522526	MS.gene048680:CDS	35.0%
	AGATTGAAGAGAATGGACAA+GGG	-	chr3.2:60522420-60522439	MS.gene048680:CDS	35.0%
	CTACCTAAGATTGAAGAGAA+TGG	-	chr3.2:60522413-60522432	MS.gene048680:CDS	35.0%
	TGTCCATTCTCTTCAATCTT+AGG	+	chr3.2:60522419-60522438	None:intergenic	35.0%
!	GTTCCAATTCAGGCATTTTT+CGG	+	chr3.2:60522094-60522113	None:intergenic	35.0%
!!	ACATGTTTTGGACATGAACA+TGG	-	chr3.2:60522454-60522473	MS.gene048680:CDS	35.0%
!!!	TGAACCAAGAGAGTTTTTTG+AGG	-	chr3.2:60522129-60522148	MS.gene048680:CDS	35.0%
	AGGTCAAGGTCAAACTCAAA+TGG	-	chr3.2:60522361-60522380	MS.gene048680:CDS	40.0%
	AGTGAACTCAGTACTCTATG+TGG	-	chr3.2:60521975-60521994	MS.gene048680:CDS	40.0%
	ATTTGGCCAAAACCCATTTG+GGG	+	chr3.2:60522564-60522583	None:intergenic	40.0%
	CTTTGAACTCCTAAAGGAGA+CGG	+	chr3.2:60522056-60522075	None:intergenic	40.0%
	GAAATGTCAATCCCCCAAAT+GGG	-	chr3.2:60522549-60522568	MS.gene048680:CDS	40.0%
	GATTTGGCCAAAACCCATTT+GGG	+	chr3.2:60522565-60522584	None:intergenic	40.0%
	GGAAGGCAACATTCAAGAAA+AGG	-	chr3.2:60521928-60521947	MS.gene048680:CDS	40.0%
	GTTCCGAAAAATGCCTGAAT+TGG	-	chr3.2:60522088-60522107	MS.gene048680:CDS	40.0%
	GTTGAAATGTTGAGCAGGAA+TGG	-	chr3.2:60522335-60522354	MS.gene048680:CDS	40.0%
!	CTTGATGAATAATGGTGGTG+GGG	-	chr3.2:60522508-60522527	MS.gene048680:CDS	40.0%
!	GAGTCATGGTCAACATGTTT+TGG	-	chr3.2:60522442-60522461	MS.gene048680:CDS	40.0%
!	GTCTCCTTTAGGAGTTCAAA+GGG	-	chr3.2:60522055-60522074	MS.gene048680:CDS	40.0%
!!!	AAGAGAGTTTTTTGAGGCAG+CGG	-	chr3.2:60522135-60522154	MS.gene048680:CDS	40.0%
	AATGGTCGTAGCACCAACTA+TGG	-	chr3.2:60522379-60522398	MS.gene048680:CDS	45.0%
	ACCTCTGGTTGAGGATCATA+AGG	+	chr3.2:60522029-60522048	None:intergenic	45.0%
	AGCACCCTTTGAACTCCTAA+AGG	+	chr3.2:60522062-60522081	None:intergenic	45.0%
	AGTCCATTAGCCACCATAGT+TGG	+	chr3.2:60522395-60522414	None:intergenic	45.0%
	ATGATCCTCAACCAGAGGTT+TGG	-	chr3.2:60522030-60522049	MS.gene048680:CDS	45.0%
	ATGTTGAGCAGGAATGGTCA+AGG	-	chr3.2:60522341-60522360	MS.gene048680:CDS	45.0%
	GCATAACTGGATCAGCACTA+AGG	+	chr3.2:60522241-60522260	None:intergenic	45.0%
	GCTGCCTCAAAAAACTCTCT+TGG	+	chr3.2:60522136-60522155	None:intergenic	45.0%
	GGAAATGTCAATCCCCCAAA+TGG	-	chr3.2:60522548-60522567	MS.gene048680:CDS	45.0%
	GGATTGACATTTCCCATAGG+AGG	+	chr3.2:60522542-60522561	None:intergenic	45.0%
	GGATTTGGCCAAAACCCATT+TGG	+	chr3.2:60522566-60522585	None:intergenic	45.0%
	TCATAATCAACGACTCTGCG+AGG	-	chr3.2:60521907-60521926	MS.gene048680:CDS	45.0%
	TCCTTATGATCCTCAACCAG+AGG	-	chr3.2:60522025-60522044	MS.gene048680:CDS	45.0%
	TTTGGCCAAAACCCATTTGG+GGG	+	chr3.2:60522563-60522582	None:intergenic	45.0%
!	CGTCTCCTTTAGGAGTTCAA+AGG	-	chr3.2:60522054-60522073	MS.gene048680:CDS	45.0%
!	TTTGAGGCAGCGGATTCAAA+AGG	-	chr3.2:60522145-60522164	MS.gene048680:CDS	45.0%
!!	TCAATCCCCCAAATGGGTTT+TGG	-	chr3.2:60522555-60522574	MS.gene048680:CDS	45.0%
	AATCAACGACTCTGCGAGGA+AGG	-	chr3.2:60521911-60521930	MS.gene048680:CDS	50.0%
	AGCAGGAATGGTCAAGGTCA+AGG	-	chr3.2:60522347-60522366	MS.gene048680:CDS	50.0%
	GAGAATGGACAAGGGAGTCA+TGG	-	chr3.2:60522428-60522447	MS.gene048680:CDS	50.0%
	GCACCAACTATGGTGGCTAA+TGG	-	chr3.2:60522389-60522408	MS.gene048680:CDS	50.0%
	GGAGGGTTGAAATGTTGAGC+AGG	-	chr3.2:60522330-60522349	MS.gene048680:CDS	50.0%
	GGGGGATTGACATTTCCCAT+AGG	+	chr3.2:60522545-60522564	None:intergenic	50.0%
!!	GAATAATGGTGGTGGGGATC+AGG	-	chr3.2:60522514-60522533	MS.gene048680:CDS	50.0%
	AAAGGAGACGGCCAAACCTC+TGG	+	chr3.2:60522044-60522063	None:intergenic	55.0%
	GAGGTTTGGCCGTCTCCTTT+AGG	-	chr3.2:60522044-60522063	MS.gene048680:CDS	55.0%
	GGTCGTAGCACCAACTATGG+TGG	-	chr3.2:60522382-60522401	MS.gene048680:CDS	55.0%
	GACGGCCAAACCTCTGGTTG+AGG	+	chr3.2:60522038-60522057	None:intergenic	60.0%
	GGGGATCAGGCACCTCCTAT+GGG	-	chr3.2:60522527-60522546	MS.gene048680:CDS	60.0%
	TGGGGATCAGGCACCTCCTA+TGG	-	chr3.2:60522526-60522545	MS.gene048680:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr3.2	gene	60521879	60522598	60521879	ID=MS.gene048680
chr3.2	mRNA	60521879	60522598	60521879	ID=MS.gene048680.t1;Parent=MS.gene048680
chr3.2	exon	60521879	60522598	60521879	ID=MS.gene048680.t1.exon1;Parent=MS.gene048680.t1
chr3.2	CDS	60521879	60522598	60521879	ID=cds.MS.gene048680.t1;Parent=MS.gene048680.t1

Gene Sequence

>MS.gene048680

ATGACTAGAAAAAAGGTGAAACTCGCATTCATAATCAACGACTCTGCGAGGAAGGCAACATTCAAGAAAAGGAAGAAAGGTCTAATGAAAAAGGTTAGTGAACTCAGTACTCTATGTGGAATTGATGCTTGTGCTATAATCTATAGTCCTTATGATCCTCAACCAGAGGTTTGGCCGTCTCCTTTAGGAGTTCAAAGGGTGCTTTCTAAGTTCCGAAAAATGCCTGAATTGGAACAAAGCAAAAAGATGGTGAACCAAGAGAGTTTTTTGAGGCAGCGGATTCAAAAGGCGAAAGATCAATTGACCAAACAAAGAAAGGATAATAGAGAAAAAGAAATGACTCAGTTAATGTTTCAGTACCTTAGTGCTGATCCAGTTATGCACAATATAAGCATGGTTGATTTGAATGATATGGCATGGTTGATTGATCAGTATTTGAAAGATATCAATAGGAGGGTTGAAATGTTGAGCAGGAATGGTCAAGGTCAAGGTCAAACTCAAATGGTCGTAGCACCAACTATGGTGGCTAATGGACTACCTAAGATTGAAGAGAATGGACAAGGGAGTCATGGTCAACATGTTTTGGACATGAACATGGATGTTATGCAAAAGCAACATTTTTTTATGAACTTGATGAATAATGGTGGTGGGGATCAGGCACCTCCTATGGGAAATGTCAATCCCCCAAATGGGTTTTGGCCAAATCCATTTTTTCGTTGA

Protein sequence

>MS.gene048680.t1

MTRKKVKLAFIINDSARKATFKKRKKGLMKKVSELSTLCGIDACAIIYSPYDPQPEVWPSPLGVQRVLSKFRKMPELEQSKKMVNQESFLRQRIQKAKDQLTKQRKDNREKEMTQLMFQYLSADPVMHNISMVDLNDMAWLIDQYLKDINRRVEMLSRNGQGQGQTQMVVAPTMVANGLPKIEENGQGSHGQHVLDMNMDVMQKQHFFMNLMNNGGGDQAPPMGNVNPPNGFWPNPFFR