AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene049049

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene049049.t1 MTR_8g102240 98.160 489 5 2 1 489 1 485 0.0 990
MS.gene049049.t1 MTR_8g102240 97.955 489 5 2 1 489 1 484 0.0 988
MS.gene049049.t1 MTR_4g088245 70.335 209 49 5 30 234 47 246 2.29e-97 296
MS.gene049049.t1 MTR_4g078875 64.378 233 68 5 30 257 26 248 3.63e-95 290
MS.gene049049.t1 MTR_2g014680 57.937 252 86 6 3 244 8 249 2.02e-90 278
MS.gene049049.t1 MTR_2g090735 73.737 198 40 4 30 222 27 217 7.15e-89 273
MS.gene049049.t1 MTR_8g069160 71.739 184 41 4 30 209 47 223 4.75e-87 268
MS.gene049049.t1 MTR_1g093680 58.639 191 69 4 27 215 36 218 1.20e-74 243
MS.gene049049.t1 MTR_5g053430 59.162 191 68 3 27 215 36 218 3.94e-73 238
MS.gene049049.t1 MTR_5g053430 59.162 191 68 3 27 215 36 218 4.95e-73 238
MS.gene049049.t1 MTR_7g033320 53.646 192 80 4 25 213 30 215 4.90e-62 211
MS.gene049049.t1 MTR_1g093670 47.291 203 85 4 43 245 19 199 2.41e-52 181
MS.gene049049.t1 MTR_6g084430 28.899 218 119 9 47 255 5 195 1.19e-13 72.4
MS.gene049049.t1 MTR_1g008740 30.994 171 90 6 47 211 13 161 2.94e-13 71.2
MS.gene049049.t1 MTR_8g059170 32.895 152 76 5 45 194 12 139 3.01e-13 71.2
MS.gene049049.t1 MTR_1g008740 30.994 171 90 6 47 211 27 175 3.99e-13 71.2
MS.gene049049.t1 MTR_2g079990 30.994 171 91 6 45 212 14 160 1.06e-12 70.1
MS.gene049049.t1 MTR_3g070030 30.682 176 89 8 45 211 17 168 1.35e-12 69.3
MS.gene049049.t1 MTR_3g088110 34.416 154 72 8 45 195 5 132 1.74e-12 68.2
MS.gene049049.t1 MTR_2g079990 32.895 152 76 5 45 194 14 141 2.25e-12 68.6
MS.gene049049.t1 MTR_7g085260 30.851 188 94 8 38 213 8 171 2.49e-12 68.9
MS.gene049049.t1 MTR_2g080010 32.258 155 79 7 47 198 15 146 4.60e-12 67.8
MS.gene049049.t1 MTR_4g089135 34.437 151 73 8 47 194 15 142 5.50e-12 67.4
MS.gene049049.t1 MTR_3g109340 31.746 189 94 9 47 225 22 185 9.81e-12 66.6
MS.gene049049.t1 MTR_4g078895 68.182 44 13 1 46 89 36 78 1.09e-11 60.8
MS.gene049049.t1 MTR_2g064090 28.326 233 119 10 45 264 4 201 1.42e-11 66.2
MS.gene049049.t1 MTR_4g108760 30.286 175 90 7 45 211 15 165 1.60e-11 66.2
MS.gene049049.t1 MTR_7g100990 31.788 151 77 6 47 194 11 138 1.89e-11 65.9
MS.gene049049.t1 MTR_3g435150 31.638 177 89 7 43 211 12 164 3.10e-11 64.7
MS.gene049049.t1 MTR_5g076850 29.341 167 86 6 45 205 4 144 3.68e-11 65.9
MS.gene049049.t1 MTR_2157s0010 31.818 154 78 6 47 196 8 138 3.89e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene049049.t1 AT4G29230 60.118 509 163 17 3 487 4 496 4.64e-180 514
MS.gene049049.t1 AT4G29230 60.000 510 163 18 3 487 4 497 2.49e-178 509
MS.gene049049.t1 AT4G29230 60.599 434 141 13 3 422 4 421 9.52e-153 442
MS.gene049049.t1 AT5G56620 48.967 484 145 15 10 476 4 402 3.33e-135 397
MS.gene049049.t1 AT5G56620 48.967 484 145 15 10 476 4 402 4.56e-135 396
MS.gene049049.t1 AT5G56620 51.582 411 117 11 10 401 4 351 6.03e-122 362
MS.gene049049.t1 AT4G28500 66.514 218 63 3 9 222 17 228 4.15e-97 295
MS.gene049049.t1 AT1G28470 67.513 197 50 3 30 219 53 242 3.06e-89 275
MS.gene049049.t1 AT1G25580 58.247 194 65 5 27 218 36 215 1.16e-68 226
MS.gene049049.t1 AT5G14490 53.299 197 81 7 25 218 30 218 2.83e-58 196
MS.gene049049.t1 AT5G14490 53.299 197 81 7 25 218 33 221 3.48e-58 196
MS.gene049049.t1 AT5G14490 53.299 197 81 7 25 218 30 218 3.58e-58 194
MS.gene049049.t1 AT5G14490 53.299 197 81 7 25 218 33 221 5.52e-58 196
MS.gene049049.t1 AT3G01600 50.510 196 87 5 23 215 28 216 5.13e-55 188
MS.gene049049.t1 AT1G01720 35.065 154 71 8 45 195 5 132 5.72e-14 72.8
MS.gene049049.t1 AT5G09330 35.526 152 70 8 47 194 6 133 1.19e-12 70.5
MS.gene049049.t1 AT5G09330 35.526 152 70 8 47 194 6 133 1.19e-12 70.5
MS.gene049049.t1 AT5G09330 35.526 152 70 8 47 194 6 133 1.19e-12 70.5
MS.gene049049.t1 AT5G09330 35.526 152 70 8 47 194 6 133 1.19e-12 70.5
MS.gene049049.t1 AT5G09330 35.526 152 70 8 47 194 6 133 1.19e-12 70.5
MS.gene049049.t1 AT3G15500 31.579 152 78 5 45 194 12 139 3.55e-12 67.8
MS.gene049049.t1 AT1G02220 30.872 149 76 5 48 193 4 128 4.12e-12 68.2
MS.gene049049.t1 AT1G33060 28.814 177 92 7 46 213 23 174 5.16e-12 68.6
MS.gene049049.t1 AT1G33060 28.814 177 92 7 46 213 23 174 5.71e-12 68.6
MS.gene049049.t1 AT1G52890 30.921 152 79 5 45 194 12 139 1.24e-11 66.2
MS.gene049049.t1 AT3G29035 30.682 176 88 7 45 211 22 172 2.28e-11 65.5
MS.gene049049.t1 AT4G27410 27.919 197 95 7 45 218 12 184 2.49e-11 65.1
MS.gene049049.t1 AT5G39610 30.222 225 116 10 45 259 18 211 3.02e-11 64.7
MS.gene049049.t1 AT5G53950 28.079 203 114 7 47 240 17 196 5.20e-11 64.7

Find 102 sgRNAs with CRISPR-Local

Find 225 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCCGAAATGATCAGATTTA+AGG 0.202690 4.2:-2829162 None:intergenic
CTTCCATTGATATTATAATT+AGG 0.223614 4.2:-2829010 None:intergenic
GCATTTGTGAAGCTTGTTAA+AGG 0.254170 4.2:-2829124 None:intergenic
AGCTTCTTGTTGGTTTCTAA+TGG 0.256606 4.2:-2832185 None:intergenic
ACCAGACCTGTTATGGTTAA+TGG 0.262903 4.2:+2828743 MS.gene049049:CDS
CCTGTTGTATATGCCTTTGA+TGG 0.263920 4.2:-2828632 None:intergenic
TGGTTTAGAGGAAGTCATTA+TGG 0.275420 4.2:+2831436 MS.gene049049:CDS
GGTTGAAATACTCTTCTTAC+TGG 0.281746 4.2:+2832212 MS.gene049049:CDS
TGTTTACCATTAACCATAAC+AGG 0.301271 4.2:-2828749 None:intergenic
CACCTTAAATCTGATCATTT+CGG 0.305151 4.2:+2829160 MS.gene049049:CDS
GATTGGAAGGCCTACTTATA+TGG 0.307907 4.2:-2830140 None:intergenic
CATCACCCAATTTGTCTTCT+CGG 0.314134 4.2:-2828828 None:intergenic
CACAGCCAAGACAGTGTAAT+TGG 0.340413 4.2:+2828924 MS.gene049049:CDS
ATGGTTAATGGTAAACAAAA+AGG 0.341742 4.2:+2828755 MS.gene049049:CDS
TATATGCCTTTGATGGTCTA+TGG 0.358040 4.2:-2828625 None:intergenic
GAAAACCCGAGAAGACAAAT+TGG 0.361472 4.2:+2828822 MS.gene049049:CDS
TCAACCACTCAGCTTCTTGT+TGG 0.371776 4.2:-2832195 None:intergenic
GGTTTAGAGGAAGTCATTAT+GGG 0.375357 4.2:+2831437 MS.gene049049:CDS
CATGTTCTTTGACTCAACTT+TGG 0.392039 4.2:-2828207 None:intergenic
TCCACAGCGAGGGCAGTGTT+TGG 0.404918 4.2:-2827848 None:intergenic
TCAATCAATTCTTGATCTGT+TGG 0.405063 4.2:-2828173 None:intergenic
TGGTAAGACCAGACCTGTTA+TGG 0.407089 4.2:+2828736 MS.gene049049:CDS
GGGAGGTGGAGAGATGATAG+TGG 0.407529 4.2:-2830169 None:intergenic
GTGAAGCTTGTTAAAGGACT+AGG 0.412943 4.2:-2829118 None:intergenic
ATCACCCAATTTGTCTTCTC+GGG 0.413577 4.2:-2828827 None:intergenic
CTTCTTCATGTTGTCCAAGA+TGG 0.416813 4.2:-2828859 None:intergenic
TGGAGAGATGATAGTGGAGA+TGG 0.419657 4.2:-2830163 None:intergenic
GGAAGAAGAGATAGTGGAAG+TGG 0.419947 4.2:+2829028 MS.gene049049:CDS
AATCTGAGTAACAATTTCCT+TGG 0.423878 4.2:-2829062 None:intergenic
GAATTCATTCTCACTATTGA+AGG 0.424881 4.2:+2828254 MS.gene049049:CDS
GATGTGTGATGGAGGGGAGG+TGG 0.425831 4.2:-2830183 None:intergenic
ATCAATGGAAGAAGAGATAG+TGG 0.430228 4.2:+2829022 MS.gene049049:CDS
TCCTTGTAAGTCACACTCTT+CGG 0.430646 4.2:-2828681 None:intergenic
GAAACAAGATGGCACAAAAC+TGG 0.433929 4.2:+2828716 MS.gene049049:CDS
AACAAGCTTCACAAATGCCT+TGG 0.435738 4.2:+2829129 MS.gene049049:CDS
GATGATAGTGGAGATGGGAT+TGG 0.442110 4.2:-2830157 None:intergenic
ATCAGGAGGCTCATGTGATC+AGG 0.445075 4.2:+2829981 MS.gene049049:CDS
ATTAGTGCAACAACAACAAC+TGG 0.448672 4.2:+2828968 MS.gene049049:CDS
CCATCAAAGGCATATACAAC+AGG 0.455100 4.2:+2828632 MS.gene049049:CDS
ACCATTAACCATAACAGGTC+TGG 0.456313 4.2:-2828744 None:intergenic
CTATCATTATAGGTTGGAAT+AGG 0.457175 4.2:+2829928 MS.gene049049:intron
GAACCTAATTATAATATCAA+TGG 0.462340 4.2:+2829007 MS.gene049049:CDS
GGATCAAATTTCACTCCTGC+TGG 0.469166 4.2:-2828152 None:intergenic
TCAGACCAATTACACTGTCT+TGG 0.476749 4.2:-2828929 None:intergenic
GATGAAATGTCTGCTGTTGT+TGG 0.479390 4.2:+2829091 MS.gene049049:CDS
CTCACTATTGAAGGAGAAGA+TGG 0.486078 4.2:+2828263 MS.gene049049:CDS
AAGGTCTGCGTCTGGTTTAG+AGG 0.487143 4.2:+2831424 MS.gene049049:CDS
CTGCGTTTGCACTAATCTGC+TGG 0.490246 4.2:-2830113 None:intergenic
ACAAGAGAAATGCAAGCATC+AGG 0.490268 4.2:+2829964 MS.gene049049:CDS
CTTGTTCTCTACACCAACTT+CGG 0.499621 4.2:+2828791 MS.gene049049:CDS
GGAGAGATGATAGTGGAGAT+GGG 0.502154 4.2:-2830162 None:intergenic
AGTGTTTGGATCCACACAAC+TGG 0.507034 4.2:-2827834 None:intergenic
CATTCTAATCATGATGATGA+TGG 0.514227 4.2:-2832258 None:intergenic
TGAAGCTTGTTAAAGGACTA+GGG 0.515511 4.2:-2829117 None:intergenic
GGTGGTGGAAGGTCTGCGTC+TGG 0.526615 4.2:+2831416 MS.gene049049:CDS
TGTGACTTACAAGGAAGTAC+AGG 0.531187 4.2:+2828689 MS.gene049049:CDS
AGAATGAATTCATCAATCAA+AGG 0.532417 4.2:-2828242 None:intergenic
AAAACCCGAGAAGACAAATT+GGG 0.533154 4.2:+2828823 MS.gene049049:CDS
CATGGTAAGAATTGTCATCA+AGG 0.534349 4.2:-2830215 None:intergenic
GTGATGCATCAATACCATCT+TGG 0.536833 4.2:+2828845 MS.gene049049:CDS
TTTAAGGTGTTGAATATCCA+AGG 0.540367 4.2:-2829146 None:intergenic
CAGCAACAACATCATAAACT+AGG 0.542717 4.2:+2831395 MS.gene049049:CDS
TGATGGTAGATGTGTGATGG+AGG 0.542872 4.2:-2830191 None:intergenic
AAGTGGAAGTTCTTCTTCCA+AGG 0.544042 4.2:+2829045 MS.gene049049:CDS
ACAACAACTGGTGAAGGAAG+TGG 0.551888 4.2:+2828980 MS.gene049049:CDS
GTAGATGTGTGATGGAGGGG+AGG 0.553746 4.2:-2830186 None:intergenic
CAACATGAAGAAGAGAAAGA+AGG 0.555164 4.2:+2828869 MS.gene049049:CDS
AGAATTGTCATCAAGGATGA+TGG 0.555788 4.2:-2830208 None:intergenic
GAATGAATTCATCAATCAAA+GGG 0.558039 4.2:-2828241 None:intergenic
ACGCAGCTTTCCATATAAGT+AGG 0.560422 4.2:+2830130 MS.gene049049:CDS
TGTGGACACAAATTTGATCA+AGG 0.561466 4.2:+2827865 MS.gene049049:CDS
TTATAGGTTGGAATAGGAGA+AGG 0.569160 4.2:+2829934 MS.gene049049:intron
CAACATCATAAACTAGGTGG+TGG 0.571157 4.2:+2831401 MS.gene049049:CDS
ACCGAAGAGTGTGACTTACA+AGG 0.573730 4.2:+2828680 MS.gene049049:CDS
TGATCTCATAGATTCTAAGC+TGG 0.574339 4.2:+2827804 MS.gene049049:CDS
CAAATTTGTGTCCACAGCGA+GGG 0.577429 4.2:-2827858 None:intergenic
GATGGTAGATGTGTGATGGA+GGG 0.582790 4.2:-2830190 None:intergenic
ATGGTAGATGTGTGATGGAG+GGG 0.584375 4.2:-2830189 None:intergenic
CAAATTTGATCAAGGCAAGC+CGG 0.585518 4.2:+2827873 MS.gene049049:CDS
ATCATAAACTAGGTGGTGGA+AGG 0.591383 4.2:+2831405 MS.gene049049:CDS
TCCAAACACTGCCCTCGCTG+TGG 0.598125 4.2:+2827847 MS.gene049049:CDS
CTGGAAGAGCACCAGTTGTG+TGG 0.599801 4.2:+2827823 MS.gene049049:CDS
ATACAACAGGAACACGAAAG+AGG 0.605890 4.2:+2828645 MS.gene049049:CDS
GGATGATGGTAGATGTGTGA+TGG 0.610477 4.2:-2830194 None:intergenic
GCAACAACAACAACTGGTGA+AGG 0.614557 4.2:+2828974 MS.gene049049:CDS
TGGAACTAACAGGATTGGCT+AGG 0.614683 4.2:+2828125 MS.gene049049:intron
ATAGTGGAGATGGGATTGGA+AGG 0.617201 4.2:-2830153 None:intergenic
TTGTTGTCATGAGGGTCGAC+TGG 0.619843 4.2:-2832235 None:intergenic
TCAAATTTGTGTCCACAGCG+AGG 0.631442 4.2:-2827859 None:intergenic
GATTGGCTAGGTCTACCAGC+AGG 0.635385 4.2:+2828137 MS.gene049049:CDS
TGATGATGGTTGTTGTCATG+AGG 0.638720 4.2:-2832244 None:intergenic
AGGAGGCTCATGTGATCAGG+AGG 0.640907 4.2:+2829984 MS.gene049049:CDS
GATGATGGTTGTTGTCATGA+GGG 0.647114 4.2:-2832243 None:intergenic
AGAGAAATGCAAGCATCAGG+AGG 0.653970 4.2:+2829967 MS.gene049049:CDS
GTACAGGAGGAGAAACAAGA+TGG 0.661050 4.2:+2828705 MS.gene049049:CDS
ACAACTGGTGAAGGAAGTGG+TGG 0.665064 4.2:+2828983 MS.gene049049:CDS
GACTTACAAGGAAGTACAGG+AGG 0.666650 4.2:+2828692 MS.gene049049:CDS
GTTTAGAGGAAGTCATTATG+GGG 0.668096 4.2:+2831438 MS.gene049049:CDS
AACGTCGTCTGATATCAAAG+AGG 0.681906 4.2:+2831469 MS.gene049049:CDS
GAAACCAACAAGAAGCTGAG+TGG 0.685593 4.2:+2832191 MS.gene049049:CDS
GGAGCATGATTGTTGAAACA+TGG 0.690838 4.2:-2830233 None:intergenic
CAACAACATCATAAACTAGG+TGG 0.704443 4.2:+2831398 MS.gene049049:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATAAAAAGCAATTAAA+GGG - chr4.2:2828091-2828110 None:intergenic 10.0%
!! AATTAATTAATTAATTAACC+TGG - chr4.2:2828317-2828336 None:intergenic 10.0%
!! TAAAAATAAAAAGCAATTAA+AGG - chr4.2:2828092-2828111 None:intergenic 10.0%
!!! AAAAAAATTATCTCTAATTT+TGG - chr4.2:2829460-2829479 None:intergenic 10.0%
!!! ATTTTTAATTTGAATTTCAA+TGG + chr4.2:2828105-2828124 MS.gene049049:intron 10.0%
!! AAAAAAAAATTGTGTTTGTT+CGG + chr4.2:2831014-2831033 MS.gene049049:intron 15.0%
!! ACTAGTACATTAAATAAAAT+CGG - chr4.2:2830790-2830809 None:intergenic 15.0%
!! AGTCTTTAGTTATAAAAAAT+AGG - chr4.2:2831617-2831636 None:intergenic 15.0%
!! ATAATTTGAAAAAATGAAAG+TGG - chr4.2:2829321-2829340 None:intergenic 15.0%
!! ATATTTGATACTATCATTAT+AGG + chr4.2:2829918-2829937 MS.gene049049:intron 15.0%
!! ATTAATTTAAATTCTCAGTT+AGG + chr4.2:2828390-2828409 MS.gene049049:intron 15.0%
!! TTATATGAAATTTCAACATT+CGG + chr4.2:2829618-2829637 MS.gene049049:intron 15.0%
!!! AATAATTTTCAATTTTGTCT+TGG + chr4.2:2830509-2830528 MS.gene049049:intron 15.0%
!!! TAAATTCATTGATTTATACT+AGG + chr4.2:2831210-2831229 MS.gene049049:intron 15.0%
!! AACTTTAATAATTTGACTCA+CGG - chr4.2:2830612-2830631 None:intergenic 20.0%
!! AATAAAGATGAAGATGAAAA+TGG - chr4.2:2831645-2831664 None:intergenic 20.0%
!! ACCTATTTATTTATTTATCG+TGG + chr4.2:2830710-2830729 MS.gene049049:intron 20.0%
!! CATGAAAAGAAGATTAATTA+GGG - chr4.2:2832133-2832152 None:intergenic 20.0%
!! CTAGTACATTAAATAAAATC+GGG - chr4.2:2830789-2830808 None:intergenic 20.0%
!! CTTCCATTGATATTATAATT+AGG - chr4.2:2829013-2829032 None:intergenic 20.0%
!! GAAAAAAAAGAAGATGAATA+TGG - chr4.2:2831735-2831754 None:intergenic 20.0%
!! GAACCTAATTATAATATCAA+TGG + chr4.2:2829007-2829026 MS.gene049049:CDS 20.0%
!! TAGTTCTCTTAAGTTAATAA+AGG - chr4.2:2830898-2830917 None:intergenic 20.0%
!! TCATGAAAAGAAGATTAATT+AGG - chr4.2:2832134-2832153 None:intergenic 20.0%
!!! CAAACACAATTTTTTTTTAC+TGG - chr4.2:2831012-2831031 None:intergenic 20.0%
!!! TAGATTTTTAAAAGAGAATG+AGG + chr4.2:2830683-2830702 MS.gene049049:intron 20.0%
!!! TTGTGAATTTTAACAAATCA+TGG - chr4.2:2830979-2830998 None:intergenic 20.0%
! AAAGAACATGCATGAAATTA+AGG + chr4.2:2829673-2829692 MS.gene049049:intron 25.0%
! AAGAACATGCATGAAATTAA+GGG + chr4.2:2829674-2829693 MS.gene049049:intron 25.0%
! AATATAGCATAGCATTTGAT+TGG + chr4.2:2829514-2829533 MS.gene049049:intron 25.0%
! ACATGAAATGAGTTTAATGA+AGG - chr4.2:2829405-2829424 None:intergenic 25.0%
! ACTATGGTGACATAATTTAA+TGG + chr4.2:2827940-2827959 MS.gene049049:intron 25.0%
! AGAATGAATTCATCAATCAA+AGG - chr4.2:2828245-2828264 None:intergenic 25.0%
! ATGGTTAATGGTAAACAAAA+AGG + chr4.2:2828755-2828774 MS.gene049049:CDS 25.0%
! ATGTATAATATGTATCCACA+TGG + chr4.2:2831360-2831379 MS.gene049049:intron 25.0%
! GAATGAATTCATCAATCAAA+GGG - chr4.2:2828244-2828263 None:intergenic 25.0%
! GCCACGATAAATAAATAAAT+AGG - chr4.2:2830714-2830733 None:intergenic 25.0%
! TAAAAGTTCTATCACGATTT+AGG - chr4.2:2830872-2830891 None:intergenic 25.0%
! TCAAACACTTACAAATACTT+TGG - chr4.2:2829372-2829391 None:intergenic 25.0%
! TCAATATGTTGAACCAAAAT+GGG + chr4.2:2831158-2831177 MS.gene049049:intron 25.0%
! TTGAATGTAACTATGTATGT+CGG - chr4.2:2829298-2829317 None:intergenic 25.0%
! TTGATACTATCATTATAGGT+TGG + chr4.2:2829922-2829941 MS.gene049049:intron 25.0%
!! AACATTTTCTTTTCTTAGCT+AGG - chr4.2:2829833-2829852 None:intergenic 25.0%
!! CCAACAAAATGAAAATTTTC+AGG + chr4.2:2830254-2830273 MS.gene049049:CDS 25.0%
!! CCTGAAAATTTTCATTTTGT+TGG - chr4.2:2830257-2830276 None:intergenic 25.0%
!! GTCCATACAAATTAATTTTG+CGG - chr4.2:2829755-2829774 None:intergenic 25.0%
!! TATAATCCCTTTTCTCATTT+TGG + chr4.2:2827967-2827986 MS.gene049049:intron 25.0%
!!! ATTTTTTACAAACAAGACCA+AGG - chr4.2:2831974-2831993 None:intergenic 25.0%
!!! TAGGAAAGGTTTTATATATG+TGG + chr4.2:2831229-2831248 MS.gene049049:intron 25.0%
!!! TCATTGATTTATACTAGGAA+AGG + chr4.2:2831215-2831234 MS.gene049049:intron 25.0%
!!! TTAACTTGGTGCAAATTAAT+GGG + chr4.2:2831131-2831150 MS.gene049049:intron 25.0%
!!! TTATGTCACCATAGTTTTAA+AGG - chr4.2:2827935-2827954 None:intergenic 25.0%
!!! TTTTTTTTACTGGAAAGAAC+AGG - chr4.2:2831002-2831021 None:intergenic 25.0%
AAGAAATAAACTTGAGCAAG+AGG + chr4.2:2828498-2828517 MS.gene049049:intron 30.0%
AATCTGAGTAACAATTTCCT+TGG - chr4.2:2829065-2829084 None:intergenic 30.0%
AGAAATAAACTTGAGCAAGA+GGG + chr4.2:2828499-2828518 MS.gene049049:intron 30.0%
ATAGCTACCAAAATGAGAAA+AGG - chr4.2:2827977-2827996 None:intergenic 30.0%
ATGAAATTTCAACATTCGGT+TGG + chr4.2:2829622-2829641 MS.gene049049:intron 30.0%
ATGCATGAAATTAAGGGTTA+AGG + chr4.2:2829680-2829699 MS.gene049049:intron 30.0%
ATTTCGAAAAAGCTATGATG+AGG + chr4.2:2829192-2829211 MS.gene049049:CDS 30.0%
CAAAGTTAGGTGACTTAATT+AGG - chr4.2:2828550-2828569 None:intergenic 30.0%
CAATATGTTGAACCAAAATG+GGG + chr4.2:2831159-2831178 MS.gene049049:intron 30.0%
CACCTTAAATCTGATCATTT+CGG + chr4.2:2829160-2829179 MS.gene049049:CDS 30.0%
CTCAATATGTTGAACCAAAA+TGG + chr4.2:2831157-2831176 MS.gene049049:intron 30.0%
GAATTCATTCTCACTATTGA+AGG + chr4.2:2828254-2828273 MS.gene049049:CDS 30.0%
GATATTCATTTCAAACTCTG+AGG - chr4.2:2832079-2832098 None:intergenic 30.0%
TAAAGGGAGAGAAATCAATA+AGG - chr4.2:2828075-2828094 None:intergenic 30.0%
TAGCTACCAAAATGAGAAAA+GGG - chr4.2:2827976-2827995 None:intergenic 30.0%
TCAATCAATTCTTGATCTGT+TGG - chr4.2:2828176-2828195 None:intergenic 30.0%
TCATTGCCAAAATCAAAGTT+AGG - chr4.2:2828563-2828582 None:intergenic 30.0%
TGAATTTCAATGGAACTAAC+AGG + chr4.2:2828115-2828134 MS.gene049049:intron 30.0%
TGTTTACCATTAACCATAAC+AGG - chr4.2:2828752-2828771 None:intergenic 30.0%
TTTACTCAACCAAATACATG+TGG + chr4.2:2831088-2831107 MS.gene049049:intron 30.0%
! AATTAACCTGGAAGTTTTTC+TGG - chr4.2:2828305-2828324 None:intergenic 30.0%
! ACTCATCGTTAAACTTTTTG+AGG + chr4.2:2830478-2830497 MS.gene049049:intron 30.0%
! ATTTTCTTTTCTTAGCTAGG+TGG - chr4.2:2829830-2829849 None:intergenic 30.0%
! CTATCATTATAGGTTGGAAT+AGG + chr4.2:2829928-2829947 MS.gene049049:intron 30.0%
! TTAGCTATTTCACACAAGAA+AGG + chr4.2:2831891-2831910 MS.gene049049:intron 30.0%
! TTTTCTTTTCTTAGCTAGGT+GGG - chr4.2:2829829-2829848 None:intergenic 30.0%
!! AAGTCACCTAACTTTGATTT+TGG + chr4.2:2828554-2828573 MS.gene049049:intron 30.0%
!! ACAGTTTCATGCTTGTTATT+TGG - chr4.2:2831258-2831277 None:intergenic 30.0%
!! CACCGCAAAATTAATTTGTA+TGG + chr4.2:2829750-2829769 MS.gene049049:intron 30.0%
!! CTTAACTTGGTGCAAATTAA+TGG + chr4.2:2831130-2831149 MS.gene049049:intron 30.0%
!! GATTTTGGCAATGAATTTTC+AGG + chr4.2:2828569-2828588 MS.gene049049:intron 30.0%
!! TCATGTATTTTTGCATTCCT+TGG + chr4.2:2831954-2831973 MS.gene049049:intron 30.0%
!! TTTAAGGTGTTGAATATCCA+AGG - chr4.2:2829149-2829168 None:intergenic 30.0%
!!! CATCATAGCTTTTTCGAAAT+GGG - chr4.2:2829192-2829211 None:intergenic 30.0%
!!! TCATCATAGCTTTTTCGAAA+TGG - chr4.2:2829193-2829212 None:intergenic 30.0%
!!! TTTTGGTTCAACATATTGAG+TGG - chr4.2:2831157-2831176 None:intergenic 30.0%
AAAACCCGAGAAGACAAATT+GGG + chr4.2:2828823-2828842 MS.gene049049:CDS 35.0%
ACAATGCAATGGAAATTGAC+TGG - chr4.2:2832039-2832058 None:intergenic 35.0%
AGAAAAGAGGTCTCTTAACT+TGG + chr4.2:2831117-2831136 MS.gene049049:intron 35.0%
AGAATTGTCATCAAGGATGA+TGG - chr4.2:2830211-2830230 None:intergenic 35.0%
AGCCGAAATGATCAGATTTA+AGG - chr4.2:2829165-2829184 None:intergenic 35.0%
ATCAATGGAAGAAGAGATAG+TGG + chr4.2:2829022-2829041 MS.gene049049:CDS 35.0%
ATCTTCATTACACTTCTCAC+AGG + chr4.2:2832156-2832175 MS.gene049049:intron 35.0%
ATTAGTGCAACAACAACAAC+TGG + chr4.2:2828968-2828987 MS.gene049049:CDS 35.0%
CAACAACATCATAAACTAGG+TGG + chr4.2:2831398-2831417 MS.gene049049:CDS 35.0%
CAACATGAAGAAGAGAAAGA+AGG + chr4.2:2828869-2828888 MS.gene049049:CDS 35.0%
CAGCAACAACATCATAAACT+AGG + chr4.2:2831395-2831414 MS.gene049049:CDS 35.0%
CATAGCATTTGATTGGAACA+TGG + chr4.2:2829521-2829540 MS.gene049049:intron 35.0%
CATGGTAAGAATTGTCATCA+AGG - chr4.2:2830218-2830237 None:intergenic 35.0%
CATGTTCTTTGACTCAACTT+TGG - chr4.2:2828210-2828229 None:intergenic 35.0%
GGTTGAAATACTCTTCTTAC+TGG + chr4.2:2832212-2832231 MS.gene049049:CDS 35.0%
GGTTTAGAGGAAGTCATTAT+GGG + chr4.2:2831437-2831456 MS.gene049049:CDS 35.0%
GTACACAGAAAACAATGCAA+TGG - chr4.2:2832050-2832069 None:intergenic 35.0%
GTCTCACATCAAGTATATTG+AGG - chr4.2:2830850-2830869 None:intergenic 35.0%
GTTTAGAGGAAGTCATTATG+GGG + chr4.2:2831438-2831457 MS.gene049049:CDS 35.0%
TATCGTCATCGTTGATATTG+TGG + chr4.2:2830815-2830834 MS.gene049049:intron 35.0%
TCGCTAGGAAAAAACTATAG+CGG + chr4.2:2830410-2830429 MS.gene049049:intron 35.0%
TCTCACTTTCCACATGTATT+TGG - chr4.2:2831100-2831119 None:intergenic 35.0%
TCTCATAATAATGCCCACTA+GGG + chr4.2:2831542-2831561 MS.gene049049:intron 35.0%
TGATCTCATAGATTCTAAGC+TGG + chr4.2:2827804-2827823 MS.gene049049:CDS 35.0%
TGATTGTCAATTGTCATCGA+TGG + chr4.2:2831290-2831309 MS.gene049049:intron 35.0%
TGGTTTAGAGGAAGTCATTA+TGG + chr4.2:2831436-2831455 MS.gene049049:CDS 35.0%
TGTGGACACAAATTTGATCA+AGG + chr4.2:2827865-2827884 MS.gene049049:CDS 35.0%
TTCAATGGAACTAACAGGAT+TGG + chr4.2:2828120-2828139 MS.gene049049:intron 35.0%
TTCTCATAATAATGCCCACT+AGG + chr4.2:2831541-2831560 MS.gene049049:intron 35.0%
! ACTATGATGACGTGGAAAAA+AGG + chr4.2:2832012-2832031 MS.gene049049:intron 35.0%
! ACTCACGGTTAAACATTTTG+AGG - chr4.2:2830597-2830616 None:intergenic 35.0%
! CTTTTTCCATAGACCATCAA+AGG + chr4.2:2828619-2828638 MS.gene049049:CDS 35.0%
! TATATGCCTTTGATGGTCTA+TGG - chr4.2:2828628-2828647 None:intergenic 35.0%
! TTATAGGTTGGAATAGGAGA+AGG + chr4.2:2829934-2829953 MS.gene049049:intron 35.0%
!! ACTGACACTGATTTATCATC+TGG - chr4.2:2829782-2829801 None:intergenic 35.0%
!! AGCTTCTTGTTGGTTTCTAA+TGG - chr4.2:2832188-2832207 None:intergenic 35.0%
!! GCATTTGTGAAGCTTGTTAA+AGG - chr4.2:2829127-2829146 None:intergenic 35.0%
!! TGAAGCTTGTTAAAGGACTA+GGG - chr4.2:2829120-2829139 None:intergenic 35.0%
AACAAGCTTCACAAATGCCT+TGG + chr4.2:2829129-2829148 MS.gene049049:CDS 40.0%
AACGTCGTCTGATATCAAAG+AGG + chr4.2:2831469-2831488 MS.gene049049:CDS 40.0%
AAGTGGAAGTTCTTCTTCCA+AGG + chr4.2:2829045-2829064 MS.gene049049:CDS 40.0%
ACAAGAGAAATGCAAGCATC+AGG + chr4.2:2829964-2829983 MS.gene049049:CDS 40.0%
ACCAGACCTGTTATGGTTAA+TGG + chr4.2:2828743-2828762 MS.gene049049:CDS 40.0%
ACCATTAACCATAACAGGTC+TGG - chr4.2:2828747-2828766 None:intergenic 40.0%
ACGCAGCTTTCCATATAAGT+AGG + chr4.2:2830130-2830149 MS.gene049049:CDS 40.0%
ATACAACAGGAACACGAAAG+AGG + chr4.2:2828645-2828664 MS.gene049049:CDS 40.0%
ATCACCCAATTTGTCTTCTC+GGG - chr4.2:2828830-2828849 None:intergenic 40.0%
CAAATTTGATCAAGGCAAGC+CGG + chr4.2:2827873-2827892 MS.gene049049:CDS 40.0%
CAACATCATAAACTAGGTGG+TGG + chr4.2:2831401-2831420 MS.gene049049:CDS 40.0%
CACTAGGGAAAGAGAAAAGA+GGG + chr4.2:2831557-2831576 MS.gene049049:intron 40.0%
CATCACCCAATTTGTCTTCT+CGG - chr4.2:2828831-2828850 None:intergenic 40.0%
CATGTGGAAAGTGAGAAAAG+AGG + chr4.2:2831104-2831123 MS.gene049049:intron 40.0%
CCTGTTGTATATGCCTTTGA+TGG - chr4.2:2828635-2828654 None:intergenic 40.0%
CGCTAGGAAAAAACTATAGC+GGG + chr4.2:2830411-2830430 MS.gene049049:intron 40.0%
CTCACTATTGAAGGAGAAGA+TGG + chr4.2:2828263-2828282 MS.gene049049:CDS 40.0%
CTTCTTCATGTTGTCCAAGA+TGG - chr4.2:2828862-2828881 None:intergenic 40.0%
CTTGTTCTCTACACCAACTT+CGG + chr4.2:2828791-2828810 MS.gene049049:CDS 40.0%
GAAAACCCGAGAAGACAAAT+TGG + chr4.2:2828822-2828841 MS.gene049049:CDS 40.0%
GAAACAAGATGGCACAAAAC+TGG + chr4.2:2828716-2828735 MS.gene049049:CDS 40.0%
GATGAAATGTCTGCTGTTGT+TGG + chr4.2:2829091-2829110 MS.gene049049:CDS 40.0%
GATTGGAAGGCCTACTTATA+TGG - chr4.2:2830143-2830162 None:intergenic 40.0%
GGAGCATGATTGTTGAAACA+TGG - chr4.2:2830236-2830255 None:intergenic 40.0%
GTAACTATGTATGTCGGTGT+CGG - chr4.2:2829292-2829311 None:intergenic 40.0%
GTGATGCATCAATACCATCT+TGG + chr4.2:2828845-2828864 MS.gene049049:CDS 40.0%
TCAGACCAATTACACTGTCT+TGG - chr4.2:2828932-2828951 None:intergenic 40.0%
TCCTTGTAAGTCACACTCTT+CGG - chr4.2:2828684-2828703 None:intergenic 40.0%
! AAAATGGGGTTGATTGTGCA+TGG + chr4.2:2831173-2831192 MS.gene049049:intron 40.0%
! AACCTGGAAGTTTTTCTGGA+TGG - chr4.2:2828301-2828320 None:intergenic 40.0%
! ACCTGGAAGTTTTTCTGGAT+GGG - chr4.2:2828300-2828319 None:intergenic 40.0%
! ATGCACAATCAACCCCATTT+TGG - chr4.2:2831174-2831193 None:intergenic 40.0%
! CCATCAAAGGCATATACAAC+AGG + chr4.2:2828632-2828651 MS.gene049049:CDS 40.0%
! CTCTTTTCTCTTTCCCTAGT+GGG - chr4.2:2831558-2831577 None:intergenic 40.0%
! GATGATGGTTGTTGTCATGA+GGG - chr4.2:2832246-2832265 None:intergenic 40.0%
! TGTGACTTACAAGGAAGTAC+AGG + chr4.2:2828689-2828708 MS.gene049049:CDS 40.0%
! TTTTCGATTCTTGCCGAAGT+TGG - chr4.2:2828807-2828826 None:intergenic 40.0%
!! AGCTTTTGACTATGATGACG+TGG + chr4.2:2832004-2832023 MS.gene049049:intron 40.0%
!! ATCATAAACTAGGTGGTGGA+AGG + chr4.2:2831405-2831424 MS.gene049049:CDS 40.0%
!! CACTGATTTATCATCTGGTC+AGG - chr4.2:2829777-2829796 None:intergenic 40.0%
!! GCTGCGAACCTTTAAAACTA+TGG + chr4.2:2827924-2827943 MS.gene049049:intron 40.0%
!! GTGAAGCTTGTTAAAGGACT+AGG - chr4.2:2829121-2829140 None:intergenic 40.0%
!! TGATGATGGTTGTTGTCATG+AGG - chr4.2:2832247-2832266 None:intergenic 40.0%
!! TTTTCAGGAGTGACAAGAGA+TGG + chr4.2:2828584-2828603 MS.gene049049:intron 40.0%
ACAACAACTGGTGAAGGAAG+TGG + chr4.2:2828980-2828999 MS.gene049049:CDS 45.0%
ACCCATCCAGAAAAACTTCC+AGG + chr4.2:2828296-2828315 MS.gene049049:CDS 45.0%
ACCGCGACTATTATACGTAC+CGG - chr4.2:2827895-2827914 None:intergenic 45.0%
AGAGAAATGCAAGCATCAGG+AGG + chr4.2:2829967-2829986 MS.gene049049:CDS 45.0%
AGTAGCTAGCTAACCAACGT+TGG + chr4.2:2829799-2829818 MS.gene049049:intron 45.0%
AGTGTTTGGATCCACACAAC+TGG - chr4.2:2827837-2827856 None:intergenic 45.0%
CAAATTTGTGTCCACAGCGA+GGG - chr4.2:2827861-2827880 None:intergenic 45.0%
CACAGCCAAGACAGTGTAAT+TGG + chr4.2:2828924-2828943 MS.gene049049:CDS 45.0%
CCACTAGGGAAAGAGAAAAG+AGG + chr4.2:2831556-2831575 MS.gene049049:intron 45.0%
GAAACCAACAAGAAGCTGAG+TGG + chr4.2:2832191-2832210 MS.gene049049:CDS 45.0%
GCAACAACAACAACTGGTGA+AGG + chr4.2:2828974-2828993 MS.gene049049:CDS 45.0%
GGATCAAATTTCACTCCTGC+TGG - chr4.2:2828155-2828174 None:intergenic 45.0%
GTACAGGAGGAGAAACAAGA+TGG + chr4.2:2828705-2828724 MS.gene049049:CDS 45.0%
TCAAATTTGTGTCCACAGCG+AGG - chr4.2:2827862-2827881 None:intergenic 45.0%
TCAACCACTCAGCTTCTTGT+TGG - chr4.2:2832198-2832217 None:intergenic 45.0%
TGATGGTAGATGTGTGATGG+AGG - chr4.2:2830194-2830213 None:intergenic 45.0%
TGGTAAGACCAGACCTGTTA+TGG + chr4.2:2828736-2828755 MS.gene049049:CDS 45.0%
! ACCGAAGAGTGTGACTTACA+AGG + chr4.2:2828680-2828699 MS.gene049049:CDS 45.0%
! ATAGTGGAGATGGGATTGGA+AGG - chr4.2:2830156-2830175 None:intergenic 45.0%
! ATGGTAGATGTGTGATGGAG+GGG - chr4.2:2830192-2830211 None:intergenic 45.0%
! CCTCTTTTCTCTTTCCCTAG+TGG - chr4.2:2831559-2831578 None:intergenic 45.0%
! GACTTACAAGGAAGTACAGG+AGG + chr4.2:2828692-2828711 MS.gene049049:CDS 45.0%
! GATGGTAGATGTGTGATGGA+GGG - chr4.2:2830193-2830212 None:intergenic 45.0%
! GGATGATGGTAGATGTGTGA+TGG - chr4.2:2830197-2830216 None:intergenic 45.0%
!! GATGATAGTGGAGATGGGAT+TGG - chr4.2:2830160-2830179 None:intergenic 45.0%
!! GGAAGAAGAGATAGTGGAAG+TGG + chr4.2:2829028-2829047 MS.gene049049:CDS 45.0%
!! GGAGAGATGATAGTGGAGAT+GGG - chr4.2:2830165-2830184 None:intergenic 45.0%
!! TGGAACTAACAGGATTGGCT+AGG + chr4.2:2828125-2828144 MS.gene049049:intron 45.0%
!! TGGAGAGATGATAGTGGAGA+TGG - chr4.2:2830166-2830185 None:intergenic 45.0%
!!! AATTATTAAAGTTTTATTAA+TGG + chr4.2:2830619-2830638 MS.gene049049:intron 5.0%
!!! CTTTTTTATAAATAAAAATT+GGG + chr4.2:2830756-2830775 MS.gene049049:intron 5.0%
!!! TCTTTTTTATAAATAAAAAT+TGG + chr4.2:2830755-2830774 MS.gene049049:intron 5.0%
!!! TTTTTTATAAATAAAAATTG+GGG + chr4.2:2830757-2830776 MS.gene049049:intron 5.0%
!!! TTTTTTCTAATATTTTTTAT+TGG + chr4.2:2829474-2829493 MS.gene049049:intron 5.0%
ACAACTGCGATTGCATCGCT+AGG + chr4.2:2830395-2830414 MS.gene049049:intron 50.0%
ACAACTGGTGAAGGAAGTGG+TGG + chr4.2:2828983-2829002 MS.gene049049:CDS 50.0%
ACGTATAATAGTCGCGGTCG+CGG + chr4.2:2827897-2827916 MS.gene049049:intron 50.0%
ATCAGGAGGCTCATGTGATC+AGG + chr4.2:2829981-2830000 MS.gene049049:CDS 50.0%
CTAGGTGGGTAAACCAACGT+TGG - chr4.2:2829815-2829834 None:intergenic 50.0%
CTGCGTTTGCACTAATCTGC+TGG - chr4.2:2830116-2830135 None:intergenic 50.0%
GCCGGTACGTATAATAGTCG+CGG + chr4.2:2827891-2827910 MS.gene049049:intron 50.0%
TTGTTGTCATGAGGGTCGAC+TGG - chr4.2:2832238-2832257 None:intergenic 50.0%
! AAGGTCTGCGTCTGGTTTAG+AGG + chr4.2:2831424-2831443 MS.gene049049:CDS 50.0%
!! ATGTATGTCGGTGTCGGACA+TGG - chr4.2:2829286-2829305 None:intergenic 50.0%
AGGAGGCTCATGTGATCAGG+AGG + chr4.2:2829984-2830003 MS.gene049049:CDS 55.0%
GGGAGGTGGAGAGATGATAG+TGG - chr4.2:2830172-2830191 None:intergenic 55.0%
! GATTGGCTAGGTCTACCAGC+AGG + chr4.2:2828137-2828156 MS.gene049049:CDS 55.0%
! GTAGATGTGTGATGGAGGGG+AGG - chr4.2:2830189-2830208 None:intergenic 55.0%
!! CTGGAAGAGCACCAGTTGTG+TGG + chr4.2:2827823-2827842 MS.gene049049:CDS 55.0%
CTGCTGCTGTTGCTGCCATG+TGG - chr4.2:2831378-2831397 None:intergenic 60.0%
TCCAAACACTGCCCTCGCTG+TGG + chr4.2:2827847-2827866 MS.gene049049:CDS 60.0%
TCCACAGCGAGGGCAGTGTT+TGG - chr4.2:2827851-2827870 None:intergenic 60.0%
! GATGTGTGATGGAGGGGAGG+TGG - chr4.2:2830186-2830205 None:intergenic 60.0%
!! GGTGGTGGAAGGTCTGCGTC+TGG + chr4.2:2831416-2831435 MS.gene049049:CDS 65.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 2827769 2832276 2827769 ID=MS.gene049049
chr4.2 mRNA 2827769 2832276 2827769 ID=MS.gene049049.t1;Parent=MS.gene049049
chr4.2 exon 2827769 2827894 2827769 ID=MS.gene049049.t1.exon1;Parent=MS.gene049049.t1
chr4.2 CDS 2827769 2827894 2827769 ID=cds.MS.gene049049.t1;Parent=MS.gene049049.t1
chr4.2 exon 2828137 2828317 2828137 ID=MS.gene049049.t1.exon2;Parent=MS.gene049049.t1
chr4.2 CDS 2828137 2828317 2828137 ID=cds.MS.gene049049.t1;Parent=MS.gene049049.t1
chr4.2 exon 2828591 2829213 2828591 ID=MS.gene049049.t1.exon3;Parent=MS.gene049049.t1
chr4.2 CDS 2828591 2829213 2828591 ID=cds.MS.gene049049.t1;Parent=MS.gene049049.t1
chr4.2 exon 2829940 2830275 2829940 ID=MS.gene049049.t1.exon4;Parent=MS.gene049049.t1
chr4.2 CDS 2829940 2830275 2829940 ID=cds.MS.gene049049.t1;Parent=MS.gene049049.t1
chr4.2 exon 2831386 2831490 2831386 ID=MS.gene049049.t1.exon5;Parent=MS.gene049049.t1
chr4.2 CDS 2831386 2831490 2831386 ID=cds.MS.gene049049.t1;Parent=MS.gene049049.t1
chr4.2 exon 2832178 2832276 2832178 ID=MS.gene049049.t1.exon6;Parent=MS.gene049049.t1
chr4.2 CDS 2832178 2832276 2832178 ID=cds.MS.gene049049.t1;Parent=MS.gene049049.t1
Gene Sequence

>MS.gene049049

ATGATGAATAATAAGATGAGCAACGTTAGTAGCTCTGATCTCATAGATTCTAAGCTGGAAGAGCACCAGTTGTGTGGATCCAAACACTGCCCTCGCTGTGGACACAAATTTGATCAAGGCAAGCCGGTACGTATAATAGTCGCGGTCGCGGTTACGCTGCGAACCTTTAAAACTATGGTGACATAATTTAATGGTGTTTATAATCCCTTTTCTCATTTTGGTAGCTATTACTAAAGTTAGTTTTCTTCTTTTCTTCTTTTAATTTCTTTTAATTATATTCTTTGTCTTTCTCTAATATTCTCTCCTTATTGATTTCTCTCCCTTTAATTGCTTTTTATTTTTAATTTGAATTTCAATGGAACTAACAGGATTGGCTAGGTCTACCAGCAGGAGTGAAATTTGATCCAACAGATCAAGAATTGATTGAACATCTTGAAGCCAAAGTTGAGTCAAAGAACATGCAGAAATCACACCCTTTGATTGATGAATTCATTCTCACTATTGAAGGAGAAGATGGAATTTGTTACACCCATCCAGAAAAACTTCCAGGTTAATTAATTAATTAATTCTCATTATTTCAATTACTACAAACAAATTATGAAATATATATTTAATTATAATATTAATTTAAATTCTCAGTTAGGTTTTTTTTTTATGTATGTGTATGTCGACACTAGCTAAGAAAATAGCTTATGAGATGTTTATTTATTTATTTATTATTATATATATAAGAAATAAACTTGAGCAAGAGGGTTTAATTTGTCTTATATATAGCTCACCTAATTAAGTCACCTAACTTTGATTTTGGCAATGAATTTTCAGGAGTGACAAGAGATGGATTAAGCAGACACTTTTTCCATAGACCATCAAAGGCATATACAACAGGAACACGAAAGAGGAGAAAGATTCAAACCGAAGAGTGTGACTTACAAGGAAGTACAGGAGGAGAAACAAGATGGCACAAAACTGGTAAGACCAGACCTGTTATGGTTAATGGTAAACAAAAAGGTTGCAAGAAAATTCTTGTTCTCTACACCAACTTCGGCAAGAATCGAAAACCCGAGAAGACAAATTGGGTGATGCATCAATACCATCTTGGACAACATGAAGAAGAGAAAGAAGGAGAGCTTGTTGTTTCAAAGATATTTTATCAGACACAGCCAAGACAGTGTAATTGGTCTGATAATAATCAAAGAATAATTAGTGCAACAACAACAACTGGTGAAGGAAGTGGTGGAGAACCTAATTATAATATCAATGGAAGAAGAGATAGTGGAAGTGGAAGTTCTTCTTCCAAGGAAATTGTTACTCAGATTCATAGAGATGAAATGTCTGCTGTTGTTGGTGTCCCTAGTCCTTTAACAAGCTTCACAAATGCCTTGGATATTCAACACCTTAAATCTGATCATTTCGGCTTCAACCCATTTCGAAAAAGCTATGATGAGGTACGTTACATATATTATGTAGCAGACACACACTTAAGATTGAAGACATGTTTAGTGTCTGACACATGTCCATGTCCGACACCGACATACATAGTTACATTCAACCACTTTCATTTTTTCAAATTATTGCTTGCATCAATGTGCTAGTGTTGTGTCCAAAGTATTTGTAAGTGTTTGATATAAATCATCCTTCATTAAACTCATTTCATGTCAACATCATCTTATCACAATGTGTTACAAACGCCAAAATTAGAGATAATTTTTTTCTAATATTTTTTATTGGTAATTTATTTAAATTTTAATATAGCATAGCATTTGATTGGAACATGGATATATAGACACGTTAATTTCTAAAGAAATGAACGTGATGTTTCACTAGCAGCTATACATTATTAACTTTATAATTATATGAAATTTCAACATTCGGTTGGTAAGTATATGCTTTTGCACAAAAAGATGAAAGAACATGCATGAAATTAAGGGTTAAGGAATGTGTAGATCGAGTGTTGACATGATTAATAAACATTGCTTACATACACCGCAAAATTAATTTGTATGGACCTGACCAGATGATAAATCAGTGTCAGTAGCTAGCTAACCAACGTTGGTTTACCCACCTAGCTAAGAAAAGAAAATGTTACATTATATTATAAATAAATAAATAAATATTAATGAATATAGTTTTGAATCTTTGATGATGATTGATATTTGATACTATCATTATAGGTTGGAATAGGAGAAGGTTCTACAACAAGAGAAATGCAAGCATCAGGAGGCTCATGTGATCAGGAGGTGCATGAAAGACAGCATCATGTATTAGCACATCATCATCAACAACAACAACAACATCATCAGCAACAGCAACAGCAACAGCAACAGCAACATGAGCATCATGTGCACCAGCAGATTAGTGCAAACGCAGCTTTCCATATAAGTAGGCCTTCCAATCCCATCTCCACTATCATCTCTCCACCTCCCCTCCATCACACATCTACCATCATCCTTGATGACAATTCTTACCATGTTTCAACAATCATGCTCCAACAAAATGAAAATTTTCAGGTATGTATTATTCATCATCTAAATCAGTCTTCTTAAATATTCTTCTTGTAGTTGTTTCTCATTAATTTTCTTTATGTAAACAATTGAGACATAATTCAAATCGCAGTAGAGCTCAGCTCACAACTGCGATTGCATCGCTAGGAAAAAACTATAGCGGGAAAAAAAATTAGTCTATAGTATTTTTATGAATCATAATAATTTAACTCATCGTTAAACTTTTTGAGGAAGAAATCAATAATTTTCAATTTTGTCTTGGTGTTTTTATTTAATAATTTTCAATTAGTCTTTATGTAAACAATTGAAAATTATTGATTTCTTCCTCAAAATGTTTAACCGTGAGTCAAATTATTAAAGTTTTATTAATGGTACTAAAATATCTCAAAAAGTGATTAATTTAAGAATTTTTTTAGATTTTTAAAAGAGAATGAGGTAACACCTATTTATTTATTTATCGTGGCAAAATAAAAGTTTAGTTGATGTCTTTTTTATAAATAAAAATTGGGGCAAATGCCCGATTTTATTTAATGTACTAGTTTCTATATCGTCATCGTTGATATTGTGGTTGTAGAATCCTCAATATACTTGATGTGAGACCTAAATCGTGATAGAACTTTTAAAACCTTTATTAACTTAAGAGAACTATTTTTACTTCATGATTTATTTTTAAATTTTTTATTAACTTAAGAGAACTATTTTTACTCCATGATTTGTTAAAATTCACAACCTGTTCTTTCCAGTAAAAAAAAATTGTGTTTGTTCGGTTTTGTTCATTTACAAGACAAAAGATCGTGTCTTTAGAATTTACTCATGAATTTACTCAACCAAATACATGTGGAAAGTGAGAAAAGAGGTCTCTTAACTTGGTGCAAATTAATGGGCCACTCAATATGTTGAACCAAAATGGGGTTGATTGTGCATGGTATTGTGCACAAGCTAAATTCATTGATTTATACTAGGAAAGGTTTTATATATGTGGTTGCCAAATAACAAGCATGAAACTGTCTAATCACTTTTTGATTGTCAATTGTCATCGATGGATCAAACACAATGATTACTTAGAATTTGATTGATATGTTGAAAATTGATGTATAATATGTATCCACATGGCAGCAACAGCAGCAGCAACAACATCATAAACTAGGTGGTGGAAGGTCTGCGTCTGGTTTAGAGGAAGTCATTATGGGGTGCACTTCAACGTCGTCTGATATCAAAGAGGTCAGAAACAAACTTTTTGACTCTGAAATATATATATGAACTTTGTTTATTTCTCATAATAATGCCCACTAGGGAAAGAGAAAAGAGGGTCAAGAAAGATACTATTAATAGAAATTAAAACAACCTATTTTTTATAACTAAAGACTAGAAGCCATTTTCATCTTCATCTTTATTATCTTTATATCTTTAAAATGTTTTCACATTTGAACAATCAAGTTGTATTTAAATTAAAGACTAGAAGCCATATTCATCTTCTTTTTTTTCCTCTCTTTAGATCTTTAAAATGTTTTCATAATTGTATATCTCAACACACTACTATTTAATTTCTTTGCATGATAGAAAATAATGAAATACGATGATCATATATATTTGCATTTTTGTAAAGTAGAAGCTTGTTTTATTAGCTATTTCACACAAGAAAGGAAGATTGCAAAAAGATGATACAGTACTACTAGTGACATAATCATGTATTTTTGCATTCCTTGGTCTTGTTTGTAAAAAATGCTAAATATTAGCTTTTGACTATGATGACGTGGAAAAAAGGACCAGTCAATTTCCATTGCATTGTTTTCTGTGTACAATATTCCTCAGAGTTTGAAATGAATATCTATATTTTTTTTTTTCATTTGAAAAAGCTAACCCTAATTAATCTTCTTTTCATGATGATCTTCATTACACTTCTCACAGGAGTCATCCATTAGAAACCAACAAGAAGCTGAGTGGTTGAAATACTCTTCTTACTGGCCAGTCGACCCTCATGACAACAACCATCATCATCATGATTAG
Protein sequence

>MS.gene049049.t1

MMNNKMSNVSSSDLIDSKLEEHQLCGSKHCPRCGHKFDQGKPDWLGLPAGVKFDPTDQELIEHLEAKVESKNMQKSHPLIDEFILTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQTEECDLQGSTGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQCNWSDNNQRIISATTTTGEGSGGEPNYNINGRRDSGSGSSSSKEIVTQIHRDEMSAVVGVPSPLTSFTNALDIQHLKSDHFGFNPFRKSYDEVGIGEGSTTREMQASGGSCDQEVHERQHHVLAHHHQQQQQHHQQQQQQQQQQHEHHVHQQISANAAFHISRPSNPISTIISPPPLHHTSTIILDDNSYHVSTIMLQQNENFQQQQQQQHHKLGGGRSASGLEEVIMGCTSTSSDIKEESSIRNQQEAEWLKYSSYWPVDPHDNNHHHHD