AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene049204

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene049204.t1 MTR_7g074790 83.146 178 12 1 83 260 1 160 1.48e-97 300
MS.gene049204.t1 MTR_7g074790 93.151 73 5 0 610 682 157 229 2.42e-40 147
MS.gene049204.t1 MTR_5g039760 58.738 206 60 2 83 287 1 182 2.53e-74 238
MS.gene049204.t1 MTR_7g061980 65.546 119 41 0 83 201 1 119 1.14e-46 161
MS.gene049204.t1 MTR_6g051425 31.541 279 179 5 91 359 13 289 7.82e-39 147
MS.gene049204.t1 MTR_0558s0020 33.457 269 154 6 85 332 32 296 8.63e-38 142
MS.gene049204.t1 MTR_0402s0040 42.135 178 96 5 92 265 26 200 2.13e-33 134
MS.gene049204.t1 MTR_8g446020 31.621 253 141 6 85 332 31 256 1.15e-28 115
MS.gene049204.t1 MTR_6g090505 33.333 228 137 4 127 339 11 238 1.70e-27 115
MS.gene049204.t1 MTR_3g058090 50.000 124 40 2 476 599 5 106 3.89e-27 106
MS.gene049204.t1 MTR_1g070355 29.060 234 157 4 97 325 79 308 3.51e-25 110
MS.gene049204.t1 MTR_4g102720 34.706 170 77 2 88 257 3 138 4.39e-25 104
MS.gene049204.t1 MTR_1g083640 28.689 244 149 7 85 307 47 286 2.09e-23 101
MS.gene049204.t1 MTR_4g035820 25.568 352 235 11 92 429 75 413 9.24e-20 94.4
MS.gene049204.t1 MTR_4g069880 58.824 68 28 0 83 150 1 68 1.08e-19 84.0
MS.gene049204.t1 MTR_5g015480 43.902 123 65 3 92 211 56 177 1.48e-19 89.4
MS.gene049204.t1 MTR_5g076070 25.751 233 160 5 95 320 56 282 3.77e-18 85.9
MS.gene049204.t1 MTR_4g117620 71.154 52 14 1 630 681 27 77 1.83e-17 77.8
MS.gene049204.t1 MTR_1g013060 28.761 226 149 5 71 290 8 227 4.42e-17 81.3
MS.gene049204.t1 MTR_7g446510 31.395 172 118 0 169 340 158 329 5.21e-17 83.2
MS.gene049204.t1 MTR_1g019850 35.664 143 79 4 85 223 63 196 9.10e-17 80.9
MS.gene049204.t1 MTR_7g446480 31.395 172 118 0 169 340 143 314 2.26e-16 81.3
MS.gene049204.t1 MTR_7g446520 27.313 227 150 2 96 322 92 303 3.15e-16 80.9
MS.gene049204.t1 MTR_2g070590 40.000 105 57 4 92 192 17 119 1.43e-14 71.2
MS.gene049204.t1 MTR_0337s0040 28.899 218 126 5 86 299 32 224 1.52e-14 73.9
MS.gene049204.t1 MTR_2g099430 46.512 86 44 2 117 201 28 112 2.08e-14 70.5
MS.gene049204.t1 MTR_5g045210 34.653 101 63 2 478 576 20 119 1.09e-13 70.9
MS.gene049204.t1 MTR_6g017200 43.820 89 47 3 92 179 58 144 1.50e-13 69.3
MS.gene049204.t1 MTR_2g014100 25.837 209 132 5 85 273 40 245 5.08e-13 70.1
MS.gene049204.t1 MTR_7g113010 39.370 127 61 3 92 216 457 569 1.57e-12 71.2
MS.gene049204.t1 MTR_6g022080 29.605 152 102 4 98 245 91 241 1.78e-12 68.2
MS.gene049204.t1 MTR_1g086270 36.842 76 48 0 386 461 1 76 2.14e-12 64.3
MS.gene049204.t1 MTR_1g057920 42.697 89 48 3 92 179 34 120 4.63e-11 61.2
MS.gene049204.t1 MTR_2g098880 36.441 118 64 4 84 194 53 166 5.98e-11 63.9
MS.gene049204.t1 MTR_2g098880 36.441 118 64 4 84 194 65 178 7.14e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene049204.t1 AT4G38180 36.702 376 233 4 89 460 70 444 9.80e-73 251
MS.gene049204.t1 AT4G15090 32.898 383 251 6 82 460 40 420 2.25e-61 220
MS.gene049204.t1 AT4G15090 32.898 383 251 6 82 460 40 420 2.25e-61 220
MS.gene049204.t1 AT4G15090 32.898 383 251 6 82 460 40 420 2.25e-61 220
MS.gene049204.t1 AT4G15090 32.898 383 251 6 82 460 40 420 2.25e-61 220
MS.gene049204.t1 AT4G15090 32.898 383 251 6 82 460 40 420 2.25e-61 220
MS.gene049204.t1 AT1G76320 31.978 369 235 7 96 460 1 357 1.29e-51 190
MS.gene049204.t1 AT1G76320 31.978 369 235 7 96 460 1 357 1.92e-51 191
MS.gene049204.t1 AT1G76320 31.978 369 235 7 96 460 1 357 1.92e-51 191
MS.gene049204.t1 AT1G76320 31.978 369 235 7 96 460 1 357 2.01e-51 191
MS.gene049204.t1 AT3G22170 29.167 384 235 5 91 460 69 429 6.30e-49 184
MS.gene049204.t1 AT3G22170 29.167 384 235 5 91 460 69 429 6.30e-49 184
MS.gene049204.t1 AT2G27110 31.635 373 225 7 91 461 48 392 1.05e-47 181
MS.gene049204.t1 AT2G27110 31.635 373 225 7 91 461 48 392 1.05e-47 181
MS.gene049204.t1 AT3G06250 28.723 376 215 7 91 460 189 517 8.20e-47 177
MS.gene049204.t1 AT3G06250 40.385 104 46 3 91 192 27 116 2.61e-12 70.9
MS.gene049204.t1 AT3G06250 40.000 85 49 1 453 537 658 740 7.16e-11 66.2
MS.gene049204.t1 AT3G06250 28.723 376 215 7 91 460 189 517 8.20e-47 177
MS.gene049204.t1 AT3G06250 40.385 104 46 3 91 192 27 116 2.61e-12 70.9
MS.gene049204.t1 AT3G06250 40.000 85 49 1 453 537 658 740 7.16e-11 66.2
MS.gene049204.t1 AT3G06250 28.723 376 215 7 91 460 189 517 8.20e-47 177
MS.gene049204.t1 AT3G06250 40.385 104 46 3 91 192 27 116 2.61e-12 70.9
MS.gene049204.t1 AT3G06250 40.000 85 49 1 453 537 658 740 7.16e-11 66.2
MS.gene049204.t1 AT5G18960 28.000 375 222 8 91 460 210 541 1.87e-41 162
MS.gene049204.t1 AT5G18960 41.346 104 45 3 91 192 42 131 5.13e-13 73.2
MS.gene049204.t1 AT5G18960 28.000 375 222 8 91 460 210 541 1.87e-41 162
MS.gene049204.t1 AT5G18960 41.346 104 45 3 91 192 42 131 5.13e-13 73.2
MS.gene049204.t1 AT1G10240 27.171 449 294 12 92 515 48 488 8.88e-39 153
MS.gene049204.t1 AT1G10240 27.171 449 294 12 92 515 48 488 8.88e-39 153
MS.gene049204.t1 AT4G19990 27.344 384 222 8 95 460 24 368 3.01e-38 152
MS.gene049204.t1 AT4G19990 27.344 384 222 8 95 460 24 368 3.01e-38 152
MS.gene049204.t1 AT4G19990 27.344 384 222 8 95 460 24 368 3.22e-38 152
MS.gene049204.t1 AT4G19990 27.344 384 222 8 95 460 38 382 3.89e-38 152
MS.gene049204.t1 AT4G19990 27.344 384 222 8 95 460 24 368 4.33e-38 152
MS.gene049204.t1 AT4G19990 27.344 384 222 8 95 460 24 368 4.33e-38 152
MS.gene049204.t1 AT2G27110 35.211 213 138 0 249 461 35 247 1.19e-37 150
MS.gene049204.t1 AT1G52520 27.926 376 244 11 92 460 85 440 6.76e-37 147
MS.gene049204.t1 AT2G32250 27.446 368 221 6 95 460 41 364 6.13e-36 145
MS.gene049204.t1 AT2G32250 27.446 368 221 6 95 460 41 364 7.85e-36 145
MS.gene049204.t1 AT2G32250 27.446 368 221 6 95 460 41 364 7.85e-36 145
MS.gene049204.t1 AT2G32250 27.446 368 221 6 95 460 41 364 7.85e-36 145
MS.gene049204.t1 AT2G32250 27.446 368 221 6 95 460 41 364 8.46e-36 145
MS.gene049204.t1 AT2G32250 27.446 368 221 6 95 460 41 364 8.46e-36 145
MS.gene049204.t1 AT2G32250 27.248 367 221 6 96 460 1 323 4.51e-35 142
MS.gene049204.t1 AT2G32250 27.248 367 221 6 96 460 1 323 4.88e-35 142
MS.gene049204.t1 AT1G80010 26.975 367 252 6 92 449 95 454 4.41e-33 136
MS.gene049204.t1 AT4G19990 26.724 348 199 7 130 460 3 311 1.56e-32 134
MS.gene049204.t1 AT5G28530 23.724 392 277 6 92 463 55 444 7.55e-32 132
MS.gene049204.t1 AT5G28530 23.724 392 277 6 92 463 55 444 7.97e-32 132
MS.gene049204.t1 AT5G28530 23.724 392 277 6 92 463 55 444 7.97e-32 132
MS.gene049204.t1 AT4G38170 31.122 196 130 2 266 460 18 209 3.88e-27 116
MS.gene049204.t1 AT5G28530 20.997 381 238 7 92 463 55 381 1.85e-18 90.1
MS.gene049204.t1 AT5G28530 20.997 381 238 7 92 463 55 381 2.05e-18 90.1
MS.gene049204.t1 AT3G59470 37.008 127 71 5 71 193 50 171 2.27e-13 71.2
MS.gene049204.t1 AT3G59470 37.008 127 71 5 71 193 50 171 2.27e-13 71.2

Find 122 sgRNAs with CRISPR-Local

Find 200 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCTTGGATTATGGGTATTT+TGG 0.203739 3.3:+80725107 MS.gene049204:CDS
AGACAATTCCATCATTTAAA+TGG 0.223041 3.3:+80725252 MS.gene049204:CDS
GCAAATATGATCTTGGATTA+TGG 0.242935 3.3:+80725098 MS.gene049204:CDS
TCAAATTTCATTCCAAGTTT+TGG 0.248103 3.3:-80724465 None:intergenic
AGCAAGTGCATGTATGAAAT+TGG 0.267426 3.3:+80725476 MS.gene049204:CDS
CACCATACTTCTTTGTCTTT+TGG 0.280482 3.3:-80724955 None:intergenic
ACCTGTCAGGTACCTTCATT+TGG 0.311547 3.3:+80724406 MS.gene049204:CDS
TGGTCAGTGAAGATCGTCTT+TGG 0.325926 3.3:-80725314 None:intergenic
GTCAATGAACATAATCTTCA+TGG 0.336161 3.3:+80725536 MS.gene049204:CDS
CTAGATTGAGCGTGTTTACT+TGG 0.343617 3.3:-80726485 None:intergenic
ATTACACTTTCAAGTATAGA+TGG 0.344143 3.3:+80724699 MS.gene049204:CDS
TGCTGCGCCGCTTGATAGTC+TGG 0.345654 3.3:+80723891 MS.gene049204:CDS
TAGAGAATTAACAACTAATA+TGG 0.346505 3.3:+80726618 MS.gene049204:CDS
CTTGAATCCCTTTGGTTGCA+TGG 0.357010 3.3:-80726387 None:intergenic
AAATGATCGTACCTCTATAA+TGG 0.360454 3.3:-80725205 None:intergenic
TGGCCGATGACTCTGGATTA+AGG 0.372007 3.3:+80724841 MS.gene049204:CDS
CTTCTTAAAATATACCTATC+AGG 0.372035 3.3:-80726101 None:intergenic
CAGAATGGAATTAAACATCT+TGG 0.376869 3.3:+80725413 MS.gene049204:CDS
CCTGTCAGGTACCTTCATTT+GGG 0.381495 3.3:+80724407 MS.gene049204:CDS
TCTGAGTAGGTACCTTCATT+TGG 0.383290 3.3:+80724332 MS.gene049204:intron
TAGTTACACAACTACGTTGA+TGG 0.384045 3.3:+80726708 MS.gene049204:CDS
GGTTGTTTCTTGAATCCCTT+TGG 0.400183 3.3:-80726395 None:intergenic
GTTGTCATCGGAGGCGGAAA+TGG 0.400900 3.3:-80723865 None:intergenic
TGTAAGAAGTATGATACATT+TGG 0.401457 3.3:+80726023 MS.gene049204:CDS
CCCTAGACATTGCTTGACTT+TGG 0.402723 3.3:-80725334 None:intergenic
TGGCTTCTTCAAATGATGAT+TGG 0.406507 3.3:+80724439 MS.gene049204:CDS
TCAAACAACCATTTAAATGA+TGG 0.407895 3.3:-80725260 None:intergenic
TCACCGCTGCTGCTTTGAAA+TGG 0.410839 3.3:-80723814 None:intergenic
CAAATATGATCTTGGATTAT+GGG 0.413707 3.3:+80725099 MS.gene049204:CDS
TACCAAAAGACAAAGAAGTA+TGG 0.414160 3.3:+80724953 MS.gene049204:CDS
TCTCTTGATTTAGTAGATCA+TGG 0.415252 3.3:-80724758 None:intergenic
ATCTTGCACAATGCCACAAC+GGG 0.416657 3.3:-80726138 None:intergenic
GAATTAAACATCTTGGAAAC+AGG 0.417860 3.3:+80725420 MS.gene049204:CDS
CGCTTAGTTCCCTTTGAGCC+GGG 0.421477 3.3:-80726416 None:intergenic
AACAAGGAGTGTCACTAAAC+AGG 0.426271 3.3:-80724367 None:intergenic
ATAATCTTCATGGTTCATCT+TGG 0.427912 3.3:+80725546 MS.gene049204:CDS
TATACCTGTGAACTTCTTTG+AGG 0.430697 3.3:-80726518 None:intergenic
ATGTAGGTTTGTTTGTTGTA+AGG 0.436082 3.3:+80724593 MS.gene049204:CDS
AACAGATTACAAATGTGTTC+TGG 0.440124 3.3:+80725069 MS.gene049204:CDS
TATGCTTTACGTGAGGGCTT+CGG 0.441084 3.3:+80724522 MS.gene049204:CDS
AGACAACTTGTCTGAACATT+CGG 0.441655 3.3:-80726205 None:intergenic
TCTGGTTTCAACCATTATAG+AGG 0.443875 3.3:+80725194 MS.gene049204:CDS
ATTTGAGCTGAACGATGTTA+AGG 0.448624 3.3:+80726073 MS.gene049204:CDS
TTCAAGTATAGATGGAAAGT+TGG 0.450565 3.3:+80724707 MS.gene049204:CDS
TTAGAGTACGCTTTACAAAC+AGG 0.450669 3.3:+80724547 MS.gene049204:CDS
ATTCGGTTTCTAGATAACTT+AGG 0.453820 3.3:-80726188 None:intergenic
CATAAACCATGGTGAGTCTC+AGG 0.455966 3.3:-80725374 None:intergenic
TCGCTTAGTTCCCTTTGAGC+CGG 0.456094 3.3:-80726417 None:intergenic
AAGAAACAACCCGGCTCAAA+GGG 0.456155 3.3:+80726407 MS.gene049204:CDS
GATGATTGGAAGCCAAAACT+TGG 0.457457 3.3:+80724453 MS.gene049204:CDS
ATTGATATGGCCGATGACTC+TGG 0.457637 3.3:+80724834 MS.gene049204:CDS
CCAATATTTGTATCATCAAA+AGG 0.459917 3.3:-80726823 None:intergenic
GGTCAGTGAAGATCGTCTTT+GGG 0.459959 3.3:-80725313 None:intergenic
ACAAGCATATGAGATTGATA+TGG 0.463781 3.3:+80724821 MS.gene049204:CDS
CTTCATTTGGGTATTTGACA+TGG 0.474659 3.3:+80724419 MS.gene049204:CDS
ACATATCCTCACGTGCTAGC+GGG 0.476750 3.3:-80726681 None:intergenic
GATTGAGCGTGTTTACTTGG+AGG 0.477553 3.3:-80726482 None:intergenic
AGGTTTGTTTGTTGTAAGGA+AGG 0.486878 3.3:+80724597 MS.gene049204:CDS
TGAGAAAGCTTGGTTGCACT+TGG 0.487477 3.3:+80725514 MS.gene049204:CDS
TCATTGTCTCTACCTTGTGT+TGG 0.489570 3.3:-80726332 None:intergenic
TTTGTTGTAAGGAAGGAATA+CGG 0.490669 3.3:+80724604 MS.gene049204:CDS
GCATCAGAACTCTCAAATGA+TGG 0.506034 3.3:-80726365 None:intergenic
ATGTTAAGGTGATTCCTGAT+AGG 0.509691 3.3:+80726087 MS.gene049204:CDS
GAGGATAAATGTGCATATGA+AGG 0.510730 3.3:+80724633 MS.gene049204:CDS
CATATCCTCACGTGCTAGCG+GGG 0.512934 3.3:-80726680 None:intergenic
ACCAAAGTCAAGCAATGTCT+AGG 0.513111 3.3:+80725333 MS.gene049204:CDS
GTGTGATGCAAATATGATCT+TGG 0.513255 3.3:+80725091 MS.gene049204:CDS
GCAGAGGTTGTCATCGGAGG+CGG 0.517297 3.3:-80723871 None:intergenic
CTTGCTTATGCTTTACGTGA+GGG 0.518622 3.3:+80724516 MS.gene049204:CDS
AGACAAAGAAGTATGGTGTA+TGG 0.518886 3.3:+80724960 MS.gene049204:CDS
CAAGAAACAACCCGGCTCAA+AGG 0.525961 3.3:+80726406 MS.gene049204:CDS
ACCTGTGAACTTCTTTGAGG+TGG 0.527525 3.3:-80726515 None:intergenic
CATGTCAAATACCCAAATGA+AGG 0.528612 3.3:-80724418 None:intergenic
GCAGGGCATATCGCTAATGT+TGG 0.538578 3.3:+80724897 MS.gene049204:CDS
ACGGTAGTGTATCGTCATGT+AGG 0.541762 3.3:+80724577 MS.gene049204:CDS
GGAAGGAATACGGAAGAAAG+AGG 0.542787 3.3:+80724614 MS.gene049204:CDS
CCTTGCTTATGCTTTACGTG+AGG 0.544741 3.3:+80724515 MS.gene049204:CDS
TTCTGATGCCATGCAACCAA+AGG 0.548134 3.3:+80726379 MS.gene049204:CDS
CAACTTATGAGCACACATGC+AGG 0.548940 3.3:+80724879 MS.gene049204:CDS
AAACAAAACGCATATGCAGA+AGG 0.552411 3.3:+80723756 None:intergenic
CATCTGATATGCATAAAAGA+AGG 0.552576 3.3:-80725036 None:intergenic
GAAATTTGACACTAGAGAAG+AGG 0.556802 3.3:+80724479 MS.gene049204:CDS
CTCACCATGGTTTATGCACA+TGG 0.561626 3.3:+80725381 MS.gene049204:CDS
ACCTGACAGGTAAATAAAAG+AGG 0.562535 3.3:-80724394 None:intergenic
CTGCCTTAATCCAGAGTCAT+CGG 0.562647 3.3:-80724844 None:intergenic
CCCAAATGAAGGTACCTGAC+AGG 0.562900 3.3:-80724407 None:intergenic
AAGTGGTCTATTGGCATCGT+TGG 0.563557 3.3:-80725162 None:intergenic
AACTTCTTTGAGGTGGAACA+CGG 0.567584 3.3:-80726508 None:intergenic
CTTGGAAACAGGATGAAGAA+AGG 0.571819 3.3:+80725431 MS.gene049204:CDS
TTAACAACTAATATGGTCGA+TGG 0.578359 3.3:+80726625 MS.gene049204:CDS
TTAACAATACATCCAAATGA+AGG 0.579905 3.3:-80724344 None:intergenic
TCTGATGCCATGCAACCAAA+GGG 0.584367 3.3:+80726380 MS.gene049204:CDS
TCCACCTCAAAGAAGTTCAC+AGG 0.588242 3.3:+80726514 MS.gene049204:CDS
AAATAAAAGAGGTAAGAACA+AGG 0.593625 3.3:-80724383 None:intergenic
CCAAAGTCAAGCAATGTCTA+GGG 0.594820 3.3:+80725334 MS.gene049204:CDS
AACTTATGAGCACACATGCA+GGG 0.596381 3.3:+80724880 MS.gene049204:CDS
AATCTTGCACAATGCCACAA+CGG 0.597437 3.3:-80726139 None:intergenic
GCAGCAGAGGTTGTCATCGG+AGG 0.598675 3.3:-80723874 None:intergenic
ACTATCAAGCGGCGCAGCAG+AGG 0.605170 3.3:-80723887 None:intergenic
AACAAAACGCATATGCAGAA+GGG 0.605678 3.3:+80723757 None:intergenic
GGCGCAGCAGAGGTTGTCAT+CGG 0.609981 3.3:-80723877 None:intergenic
CGCTAATGTTGGATTTACAG+AGG 0.612615 3.3:+80724908 MS.gene049204:CDS
AACATATCCTCACGTGCTAG+CGG 0.615108 3.3:-80726682 None:intergenic
CATCGGAGGCGGAAATGGCA+AGG 0.616077 3.3:-80723860 None:intergenic
GGCATCGTTGGTACAATATG+TGG 0.617702 3.3:-80725150 None:intergenic
AGTATGGTGTATGGTGACGT+TGG 0.624391 3.3:+80724969 MS.gene049204:CDS
TGACTCTGGATTAAGGCAGA+AGG 0.626414 3.3:+80724848 MS.gene049204:CDS
ACATGGCACTTGTTGCAGAA+TGG 0.627403 3.3:+80725398 MS.gene049204:CDS
TGTCTCTAAGTTCATTAGAG+CGG 0.630054 3.3:+80726223 MS.gene049204:CDS
TGATATGCATAAAAGAAGGA+CGG 0.636813 3.3:-80725032 None:intergenic
TACGATGCCAGACTATCAAG+CGG 0.655346 3.3:-80723898 None:intergenic
ATATCCTCACGTGCTAGCGG+GGG 0.659146 3.3:-80726679 None:intergenic
GAAATGGCAAAGAGAAAGAG+CGG 0.663762 3.3:-80723798 None:intergenic
TGGACAAGAGAAGCCCGTTG+TGG 0.666264 3.3:+80726125 MS.gene049204:CDS
CCTCACGTAAAGCATAAGCA+AGG 0.669280 3.3:-80724515 None:intergenic
TAATGTTGGATTTACAGAGG+TGG 0.672534 3.3:+80724911 MS.gene049204:CDS
TTTACAAACAGGAAGAAAGA+CGG 0.687186 3.3:+80724558 MS.gene049204:CDS
TTGCCATTTCAAAGCAGCAG+CGG 0.687532 3.3:+80723811 MS.gene049204:CDS
AAGGGATTCAAGAAACAACC+CGG 0.691658 3.3:+80726398 MS.gene049204:CDS
GTAACAGAATGTCCAACACA+AGG 0.694581 3.3:+80726320 MS.gene049204:CDS
GTGATGCCTGAGACTCACCA+TGG 0.716138 3.3:+80725368 MS.gene049204:CDS
AGTGCCATGTGCATAAACCA+TGG 0.773388 3.3:-80725385 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTAGATTTTAAGAAATTTA+GGG + chr3.3:80724080-80724099 MS.gene049204:intron 10.0%
!!! TTATTTTTTGTTATTAATGT+AGG + chr3.3:80726798-80726817 MS.gene049204:intron 10.0%
!! ACCAAAATCAAAATTAAAAT+AGG + chr3.3:80723996-80724015 MS.gene049204:intron 15.0%
!!! GATTAGATTTTAAGAAATTT+AGG + chr3.3:80724079-80724098 MS.gene049204:intron 15.0%
!!! TCCTATTTTAATTTTGATTT+TGG - chr3.3:80724000-80724019 None:intergenic 15.0%
!! ATGAAGGAAAAAAAAAGATA+AGG - chr3.3:80723941-80723960 None:intergenic 20.0%
!! TAGAGAATTAACAACTAATA+TGG + chr3.3:80726618-80726637 MS.gene049204:CDS 20.0%
!!! GAAATTTAGGGTTTTATTTT+AGG + chr3.3:80724092-80724111 MS.gene049204:intron 20.0%
!!! TAATGTTGCATAATCATTTT+AGG + chr3.3:80726594-80726613 MS.gene049204:intron 20.0%
! AAATAAAAGAGGTAAGAACA+AGG - chr3.3:80724386-80724405 None:intergenic 25.0%
! AGACAATTCCATCATTTAAA+TGG + chr3.3:80725252-80725271 MS.gene049204:CDS 25.0%
! AGCTAAACATTAGATGAATT+AGG + chr3.3:80724186-80724205 MS.gene049204:intron 25.0%
! CAAATATGATCTTGGATTAT+GGG + chr3.3:80725099-80725118 MS.gene049204:CDS 25.0%
! CATAACTATTCAAAAGATGA+AGG - chr3.3:80723957-80723976 None:intergenic 25.0%
! CCAATATTTGTATCATCAAA+AGG - chr3.3:80726826-80726845 None:intergenic 25.0%
! CTTCTTAAAATATACCTATC+AGG - chr3.3:80726104-80726123 None:intergenic 25.0%
! TAATCCTACAGAATTGAAAT+TGG - chr3.3:80724064-80724083 None:intergenic 25.0%
! TCAAACAACCATTTAAATGA+TGG - chr3.3:80725263-80725282 None:intergenic 25.0%
! TTAACAATACATCCAAATGA+AGG - chr3.3:80724347-80724366 None:intergenic 25.0%
!! ATTACACTTTCAAGTATAGA+TGG + chr3.3:80724699-80724718 MS.gene049204:CDS 25.0%
!! CTTCATCTTTTGAATAGTTA+TGG + chr3.3:80723955-80723974 MS.gene049204:intron 25.0%
!! TCAAATTTCATTCCAAGTTT+TGG - chr3.3:80724468-80724487 None:intergenic 25.0%
!! TGTAAGAAGTATGATACATT+TGG + chr3.3:80726023-80726042 MS.gene049204:CDS 25.0%
!!! ATAGGTATATTTTAAGAAGG+TGG + chr3.3:80726105-80726124 MS.gene049204:CDS 25.0%
!!! CCTTTTGATGATACAAATAT+TGG + chr3.3:80726823-80726842 MS.gene049204:CDS 25.0%
!!! CTGATAGGTATATTTTAAGA+AGG + chr3.3:80726102-80726121 MS.gene049204:CDS 25.0%
!!! GTAAATATGCTCTGTTTTTT+AGG + chr3.3:80724139-80724158 MS.gene049204:intron 25.0%
AAAAAAAGCAAGTGGTCTAT+TGG - chr3.3:80725174-80725193 None:intergenic 30.0%
AAACATTTCGAAAGAGTTGT+TGG + chr3.3:80725723-80725742 MS.gene049204:intron 30.0%
AAACCAGAAAAAAAAGCAAG+TGG - chr3.3:80725182-80725201 None:intergenic 30.0%
AAATGATCGTACCTCTATAA+TGG - chr3.3:80725208-80725227 None:intergenic 30.0%
AACAGATTACAAATGTGTTC+TGG + chr3.3:80725069-80725088 MS.gene049204:CDS 30.0%
AACATTTCGAAAGAGTTGTT+GGG + chr3.3:80725724-80725743 MS.gene049204:intron 30.0%
ACAAGCATATGAGATTGATA+TGG + chr3.3:80724821-80724840 MS.gene049204:CDS 30.0%
AGGAATAACTACACTTGATT+AGG + chr3.3:80724016-80724035 MS.gene049204:intron 30.0%
ATAATCTTCATGGTTCATCT+TGG + chr3.3:80725546-80725565 MS.gene049204:CDS 30.0%
CAGAATGGAATTAAACATCT+TGG + chr3.3:80725413-80725432 MS.gene049204:CDS 30.0%
CATCTGATATGCATAAAAGA+AGG - chr3.3:80725039-80725058 None:intergenic 30.0%
CTTCTTACAACTACAAGTAA+TGG - chr3.3:80726012-80726031 None:intergenic 30.0%
GAATTAAACATCTTGGAAAC+AGG + chr3.3:80725420-80725439 MS.gene049204:CDS 30.0%
GCAAATATGATCTTGGATTA+TGG + chr3.3:80725098-80725117 MS.gene049204:CDS 30.0%
GGAATAACTACACTTGATTA+GGG + chr3.3:80724017-80724036 MS.gene049204:intron 30.0%
GTCAATGAACATAATCTTCA+TGG + chr3.3:80725536-80725555 MS.gene049204:CDS 30.0%
GTGCATATGAAGGAAAAATT+CGG + chr3.3:80724643-80724662 MS.gene049204:CDS 30.0%
TACCAAAAGACAAAGAAGTA+TGG + chr3.3:80724953-80724972 MS.gene049204:CDS 30.0%
TCTCTTGATTTAGTAGATCA+TGG - chr3.3:80724761-80724780 None:intergenic 30.0%
TGAACCAATTTCAATTCTGT+AGG + chr3.3:80724057-80724076 MS.gene049204:intron 30.0%
TGATATGCATAAAAGAAGGA+CGG - chr3.3:80725035-80725054 None:intergenic 30.0%
TTAACAACTAATATGGTCGA+TGG + chr3.3:80726625-80726644 MS.gene049204:CDS 30.0%
TTCAAGTATAGATGGAAAGT+TGG + chr3.3:80724707-80724726 MS.gene049204:CDS 30.0%
TTTACAAACAGGAAGAAAGA+CGG + chr3.3:80724558-80724577 MS.gene049204:CDS 30.0%
! ATCTTGGATTATGGGTATTT+TGG + chr3.3:80725107-80725126 MS.gene049204:CDS 30.0%
! ATGTTGTCTAAAACCGAATT+TGG + chr3.3:80725683-80725702 MS.gene049204:intron 30.0%
! ATTCGGTTTCTAGATAACTT+AGG - chr3.3:80726191-80726210 None:intergenic 30.0%
! CTTCTTTTATGCATATCAGA+TGG + chr3.3:80725037-80725056 MS.gene049204:CDS 30.0%
! TGTTGTCTAAAACCGAATTT+GGG + chr3.3:80725684-80725703 MS.gene049204:intron 30.0%
! TTTGTTGTAAGGAAGGAATA+CGG + chr3.3:80724604-80724623 MS.gene049204:CDS 30.0%
!! ATGTAGGTTTGTTTGTTGTA+AGG + chr3.3:80724593-80724612 MS.gene049204:CDS 30.0%
!! TATAGAGGTACGATCATTTT+TGG + chr3.3:80725209-80725228 MS.gene049204:CDS 30.0%
!!! TTTTGGTGATGTTGTTTCAT+TGG + chr3.3:80725124-80725143 MS.gene049204:CDS 30.0%
AATTGCAGGATACCCAAATT+CGG - chr3.3:80725699-80725718 None:intergenic 35.0%
ACATTTCGAAAGAGTTGTTG+GGG + chr3.3:80725725-80725744 MS.gene049204:intron 35.0%
ACCTGACAGGTAAATAAAAG+AGG - chr3.3:80724397-80724416 None:intergenic 35.0%
AGACAACTTGTCTGAACATT+CGG - chr3.3:80726208-80726227 None:intergenic 35.0%
AGAGTCAGTTTCATGTCTAA+TGG - chr3.3:80725916-80725935 None:intergenic 35.0%
AGCAAGTGCATGTATGAAAT+TGG + chr3.3:80725476-80725495 MS.gene049204:CDS 35.0%
ATGTTAAGGTGATTCCTGAT+AGG + chr3.3:80726087-80726106 MS.gene049204:CDS 35.0%
ATTGAAGTAAACCCATTGCA+AGG + chr3.3:80724115-80724134 MS.gene049204:intron 35.0%
ATTTGAGCTGAACGATGTTA+AGG + chr3.3:80726073-80726092 MS.gene049204:CDS 35.0%
CATGTCAAATACCCAAATGA+AGG - chr3.3:80724421-80724440 None:intergenic 35.0%
CGAAATGTTTCAAGAATTGC+AGG - chr3.3:80725713-80725732 None:intergenic 35.0%
CTTCATTTGGGTATTTGACA+TGG + chr3.3:80724419-80724438 MS.gene049204:CDS 35.0%
GAAATTTGACACTAGAGAAG+AGG + chr3.3:80724479-80724498 MS.gene049204:CDS 35.0%
GAGGATAAATGTGCATATGA+AGG + chr3.3:80724633-80724652 MS.gene049204:CDS 35.0%
GAGTCAGTTTCATGTCTAAT+GGG - chr3.3:80725915-80725934 None:intergenic 35.0%
GTGTGATGCAAATATGATCT+TGG + chr3.3:80725091-80725110 MS.gene049204:CDS 35.0%
TAATGTTGGATTTACAGAGG+TGG + chr3.3:80724911-80724930 MS.gene049204:CDS 35.0%
TAGTTACACAACTACGTTGA+TGG + chr3.3:80726708-80726727 MS.gene049204:CDS 35.0%
TATACCTGTGAACTTCTTTG+AGG - chr3.3:80726521-80726540 None:intergenic 35.0%
TATGAAGGAAAAATTCGGAG+AGG + chr3.3:80724648-80724667 MS.gene049204:CDS 35.0%
TCACCATTACTACTCCAAAT+GGG + chr3.3:80725819-80725838 MS.gene049204:intron 35.0%
TGGCTTCTTCAAATGATGAT+TGG + chr3.3:80724439-80724458 MS.gene049204:CDS 35.0%
TGTCTCTAAGTTCATTAGAG+CGG + chr3.3:80726223-80726242 MS.gene049204:CDS 35.0%
TTAGAGTACGCTTTACAAAC+AGG + chr3.3:80724547-80724566 MS.gene049204:CDS 35.0%
TTCACCATTACTACTCCAAA+TGG + chr3.3:80725818-80725837 MS.gene049204:intron 35.0%
TTGAAGTAAACCCATTGCAA+GGG + chr3.3:80724116-80724135 MS.gene049204:intron 35.0%
! AGACAAAGAAGTATGGTGTA+TGG + chr3.3:80724960-80724979 MS.gene049204:CDS 35.0%
! ATCACTAATGAGAAGCATGA+AGG + chr3.3:80725951-80725970 MS.gene049204:intron 35.0%
! CACCATACTTCTTTGTCTTT+TGG - chr3.3:80724958-80724977 None:intergenic 35.0%
! GTATTTTCAACGACAGTTGT+TGG + chr3.3:80725004-80725023 MS.gene049204:CDS 35.0%
! TCACTAATGAGAAGCATGAA+GGG + chr3.3:80725952-80725971 MS.gene049204:intron 35.0%
! TCTGGTTTCAACCATTATAG+AGG + chr3.3:80725194-80725213 MS.gene049204:CDS 35.0%
! TGGCATTGTGCAAGATTTTA+GGG + chr3.3:80726145-80726164 MS.gene049204:CDS 35.0%
!! AAGCAGATTTTGAGAAAGCT+TGG + chr3.3:80725504-80725523 MS.gene049204:CDS 35.0%
!! ACCTCTTTTATTTACCTGTC+AGG + chr3.3:80724393-80724412 MS.gene049204:CDS 35.0%
!! AGGTTTGTTTGTTGTAAGGA+AGG + chr3.3:80724597-80724616 MS.gene049204:CDS 35.0%
!! ATGAAGGAAGCATTAACACT+TGG + chr3.3:80725615-80725634 MS.gene049204:intron 35.0%
!!! AGACCACTTGCTTTTTTTTC+TGG + chr3.3:80725176-80725195 MS.gene049204:CDS 35.0%
AACTTATGAGCACACATGCA+GGG + chr3.3:80724880-80724899 MS.gene049204:CDS 40.0%
AAGGGATTCAAGAAACAACC+CGG + chr3.3:80726398-80726417 MS.gene049204:CDS 40.0%
AATCCTCACATAAGCTTGCA+AGG + chr3.3:80725781-80725800 MS.gene049204:intron 40.0%
AATCTTGCACAATGCCACAA+CGG - chr3.3:80726142-80726161 None:intergenic 40.0%
ACCAAAGTCAAGCAATGTCT+AGG + chr3.3:80725333-80725352 MS.gene049204:CDS 40.0%
AGCATATTTACCCCTTGCAA+TGG - chr3.3:80724130-80724149 None:intergenic 40.0%
ATTTGGTCTGATGTCTGAGT+AGG + chr3.3:80724319-80724338 MS.gene049204:intron 40.0%
CCAAAGTCAAGCAATGTCTA+GGG + chr3.3:80725334-80725353 MS.gene049204:CDS 40.0%
CGCTAATGTTGGATTTACAG+AGG + chr3.3:80724908-80724927 MS.gene049204:CDS 40.0%
CTAGATTGAGCGTGTTTACT+TGG - chr3.3:80726488-80726507 None:intergenic 40.0%
CTGTTTGTCTGTCATATCAG+TGG + chr3.3:80724285-80724304 MS.gene049204:intron 40.0%
CTTGCTTATGCTTTACGTGA+GGG + chr3.3:80724516-80724535 MS.gene049204:CDS 40.0%
CTTGGAAACAGGATGAAGAA+AGG + chr3.3:80725431-80725450 MS.gene049204:CDS 40.0%
GAAATGGCAAAGAGAAAGAG+CGG - chr3.3:80723801-80723820 None:intergenic 40.0%
GAAATGGCAAGGAAAAAGAG+CGG - chr3.3:80723852-80723871 None:intergenic 40.0%
GATGATTGGAAGCCAAAACT+TGG + chr3.3:80724453-80724472 MS.gene049204:CDS 40.0%
GCATATTTACCCCTTGCAAT+GGG - chr3.3:80724129-80724148 None:intergenic 40.0%
GCATCAGAACTCTCAAATGA+TGG - chr3.3:80726368-80726387 None:intergenic 40.0%
GTAACAGAATGTCCAACACA+AGG + chr3.3:80726320-80726339 MS.gene049204:CDS 40.0%
GTGTGTATATCTCTCCCATT+TGG - chr3.3:80725836-80725855 None:intergenic 40.0%
TAACCTTGCAAGCTTATGTG+AGG - chr3.3:80725787-80725806 None:intergenic 40.0%
TCATTGTCTCTACCTTGTGT+TGG - chr3.3:80726335-80726354 None:intergenic 40.0%
TCTGAGTAGGTACCTTCATT+TGG + chr3.3:80724332-80724351 MS.gene049204:intron 40.0%
TGAAGTAAACCCATTGCAAG+GGG + chr3.3:80724117-80724136 MS.gene049204:intron 40.0%
TTTGTCTGTCATATCAGTGG+TGG + chr3.3:80724288-80724307 MS.gene049204:intron 40.0%
! ATGGGCTGCATGTTATATGA+AGG + chr3.3:80725599-80725618 MS.gene049204:intron 40.0%
! GGCATTGTGCAAGATTTTAG+GGG + chr3.3:80726146-80726165 MS.gene049204:CDS 40.0%
! GTGGCATTGTGCAAGATTTT+AGG + chr3.3:80726144-80726163 MS.gene049204:CDS 40.0%
! TCTCCCATTTGGAGTAGTAA+TGG - chr3.3:80725825-80725844 None:intergenic 40.0%
!! AACAAGGAGTGTCACTAAAC+AGG - chr3.3:80724370-80724389 None:intergenic 40.0%
!! AACTTCTTTGAGGTGGAACA+CGG - chr3.3:80726511-80726530 None:intergenic 40.0%
!! CAGTGGTGGTGGTTTAAATT+TGG + chr3.3:80724302-80724321 MS.gene049204:intron 40.0%
!! GCAAGATTTTAGGGGAAAAG+AGG + chr3.3:80726154-80726173 MS.gene049204:CDS 40.0%
!! GGTTGTTTCTTGAATCCCTT+TGG - chr3.3:80726398-80726417 None:intergenic 40.0%
AACATATCCTCACGTGCTAG+CGG - chr3.3:80726685-80726704 None:intergenic 45.0%
AAGAAACAACCCGGCTCAAA+GGG + chr3.3:80726407-80726426 MS.gene049204:CDS 45.0%
AAGTGGTCTATTGGCATCGT+TGG - chr3.3:80725165-80725184 None:intergenic 45.0%
ACCTGTCAGGTACCTTCATT+TGG + chr3.3:80724406-80724425 MS.gene049204:CDS 45.0%
ACGGTAGTGTATCGTCATGT+AGG + chr3.3:80724577-80724596 MS.gene049204:CDS 45.0%
AGTGCCATGTGCATAAACCA+TGG - chr3.3:80725388-80725407 None:intergenic 45.0%
ATCTTGCACAATGCCACAAC+GGG - chr3.3:80726141-80726160 None:intergenic 45.0%
ATTGATATGGCCGATGACTC+TGG + chr3.3:80724834-80724853 MS.gene049204:CDS 45.0%
CAACTTATGAGCACACATGC+AGG + chr3.3:80724879-80724898 MS.gene049204:CDS 45.0%
CATAAACCATGGTGAGTCTC+AGG - chr3.3:80725377-80725396 None:intergenic 45.0%
CCCTAGACATTGCTTGACTT+TGG - chr3.3:80725337-80725356 None:intergenic 45.0%
CCTCACGTAAAGCATAAGCA+AGG - chr3.3:80724518-80724537 None:intergenic 45.0%
CCTGTCAGGTACCTTCATTT+GGG + chr3.3:80724407-80724426 MS.gene049204:CDS 45.0%
CCTTGCTTATGCTTTACGTG+AGG + chr3.3:80724515-80724534 MS.gene049204:CDS 45.0%
CTCACCATGGTTTATGCACA+TGG + chr3.3:80725381-80725400 MS.gene049204:CDS 45.0%
CTGCCTTAATCCAGAGTCAT+CGG - chr3.3:80724847-80724866 None:intergenic 45.0%
CTTGAATCCCTTTGGTTGCA+TGG - chr3.3:80726390-80726409 None:intergenic 45.0%
GATTGAGCGTGTTTACTTGG+AGG - chr3.3:80726485-80726504 None:intergenic 45.0%
GGAAGGAATACGGAAGAAAG+AGG + chr3.3:80724614-80724633 MS.gene049204:CDS 45.0%
GGCATCGTTGGTACAATATG+TGG - chr3.3:80725153-80725172 None:intergenic 45.0%
GGTCAGTGAAGATCGTCTTT+GGG - chr3.3:80725316-80725335 None:intergenic 45.0%
GTGTTATCGAGTATGCAGGT+TGG + chr3.3:80724228-80724247 MS.gene049204:intron 45.0%
TACGATGCCAGACTATCAAG+CGG - chr3.3:80723901-80723920 None:intergenic 45.0%
TATGCTTTACGTGAGGGCTT+CGG + chr3.3:80724522-80724541 MS.gene049204:CDS 45.0%
TCCACCTCAAAGAAGTTCAC+AGG + chr3.3:80726514-80726533 MS.gene049204:CDS 45.0%
TCTGATGCCATGCAACCAAA+GGG + chr3.3:80726380-80726399 MS.gene049204:CDS 45.0%
TGACTCTGGATTAAGGCAGA+AGG + chr3.3:80724848-80724867 MS.gene049204:CDS 45.0%
TGAGAAAGCTTGGTTGCACT+TGG + chr3.3:80725514-80725533 MS.gene049204:CDS 45.0%
TGGTCAGTGAAGATCGTCTT+TGG - chr3.3:80725317-80725336 None:intergenic 45.0%
TTCTGATGCCATGCAACCAA+AGG + chr3.3:80726379-80726398 MS.gene049204:CDS 45.0%
TTGCGTGTTATCGAGTATGC+AGG + chr3.3:80724224-80724243 MS.gene049204:intron 45.0%
! ACATGGCACTTGTTGCAGAA+TGG + chr3.3:80725398-80725417 MS.gene049204:CDS 45.0%
! ACCTGTGAACTTCTTTGAGG+TGG - chr3.3:80726518-80726537 None:intergenic 45.0%
! AGTATGGTGTATGGTGACGT+TGG + chr3.3:80724969-80724988 MS.gene049204:CDS 45.0%
! CTTGATAGTCTGGCATCGTA+AGG + chr3.3:80723901-80723920 MS.gene049204:intron 45.0%
! TTGCCATTTCAAAGCAGCAG+CGG + chr3.3:80723811-80723830 MS.gene049204:CDS 45.0%
!! GCAGGTTGGAGCTTCATTTT+TGG + chr3.3:80724242-80724261 MS.gene049204:intron 45.0%
!!! GGAGGAGCACTTCTTTTCTT+GGG - chr3.3:80726467-80726486 None:intergenic 45.0%
!!! TGGAGGAGCACTTCTTTTCT+TGG - chr3.3:80726468-80726487 None:intergenic 45.0%
!!! TTTTCTTGGGTTGACGCTCA+AGG - chr3.3:80726454-80726473 None:intergenic 45.0%
!! TATGAAATAAAAAAAAAAAT+GGG + chr3.3:80725581-80725600 MS.gene049204:intron 5.0%
!! TTATGAAATAAAAAAAAAAA+TGG + chr3.3:80725580-80725599 MS.gene049204:intron 5.0%
ACATATCCTCACGTGCTAGC+GGG - chr3.3:80726684-80726703 None:intergenic 50.0%
CAAGAAACAACCCGGCTCAA+AGG + chr3.3:80726406-80726425 MS.gene049204:CDS 50.0%
GCAGGGCATATCGCTAATGT+TGG + chr3.3:80724897-80724916 MS.gene049204:CDS 50.0%
GTCTGTCATATCAGTGGTGG+TGG + chr3.3:80724291-80724310 MS.gene049204:intron 50.0%
TCGCTTAGTTCCCTTTGAGC+CGG - chr3.3:80726420-80726439 None:intergenic 50.0%
TGGCCGATGACTCTGGATTA+AGG + chr3.3:80724841-80724860 MS.gene049204:CDS 50.0%
!! CCCAAATGAAGGTACCTGAC+AGG - chr3.3:80724410-80724429 None:intergenic 50.0%
!! TCACCGCTGCTGCTTTGAAA+TGG - chr3.3:80723817-80723836 None:intergenic 50.0%
ATATCCTCACGTGCTAGCGG+GGG - chr3.3:80726682-80726701 None:intergenic 55.0%
CATATCCTCACGTGCTAGCG+GGG - chr3.3:80726683-80726702 None:intergenic 55.0%
CGCTTAGTTCCCTTTGAGCC+GGG - chr3.3:80726419-80726438 None:intergenic 55.0%
CTAGCGGGGGCTCATAAGTT+GGG - chr3.3:80726669-80726688 None:intergenic 55.0%
GTGATGCCTGAGACTCACCA+TGG + chr3.3:80725368-80725387 MS.gene049204:CDS 55.0%
GTTGTCATCGGAGGCGGAAA+TGG - chr3.3:80723868-80723887 None:intergenic 55.0%
TAGCGGGGGCTCATAAGTTG+GGG - chr3.3:80726668-80726687 None:intergenic 55.0%
TGGACAAGAGAAGCCCGTTG+TGG + chr3.3:80726125-80726144 MS.gene049204:CDS 55.0%
ACTATCAAGCGGCGCAGCAG+AGG - chr3.3:80723890-80723909 None:intergenic 60.0%
CATCGGAGGCGGAAATGGCA+AGG - chr3.3:80723863-80723882 None:intergenic 60.0%
GCAGAGGTTGTCATCGGAGG+CGG - chr3.3:80723874-80723893 None:intergenic 60.0%
GCAGCAGAGGTTGTCATCGG+AGG - chr3.3:80723877-80723896 None:intergenic 60.0%
GCTAGCGGGGGCTCATAAGT+TGG - chr3.3:80726670-80726689 None:intergenic 60.0%
GGCGCAGCAGAGGTTGTCAT+CGG - chr3.3:80723880-80723899 None:intergenic 60.0%
! AGCGGGGGCTCATAAGTTGG+GGG - chr3.3:80726667-80726686 None:intergenic 60.0%
! TGCTGCGCCGCTTGATAGTC+TGG + chr3.3:80723891-80723910 MS.gene049204:CDS 60.0%
! GGGCTCATAAGTTGGGGGCG+CGG - chr3.3:80726662-80726681 None:intergenic 65.0%
TGAGCCCCCGCTAGCACGTG+AGG + chr3.3:80726675-80726694 MS.gene049204:CDS 70.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 80723769 80726858 80723769 ID=MS.gene049204
chr3.3 mRNA 80723769 80726858 80723769 ID=MS.gene049204.t1;Parent=MS.gene049204
chr3.3 exon 80723769 80723917 80723769 ID=MS.gene049204.t1.exon1;Parent=MS.gene049204.t1
chr3.3 CDS 80723769 80723917 80723769 ID=cds.MS.gene049204.t1;Parent=MS.gene049204.t1
chr3.3 exon 80724341 80725573 80724341 ID=MS.gene049204.t1.exon2;Parent=MS.gene049204.t1
chr3.3 CDS 80724341 80725573 80724341 ID=cds.MS.gene049204.t1;Parent=MS.gene049204.t1
chr3.3 exon 80726022 80726535 80726022 ID=MS.gene049204.t1.exon3;Parent=MS.gene049204.t1
chr3.3 CDS 80726022 80726535 80726022 ID=cds.MS.gene049204.t1;Parent=MS.gene049204.t1
chr3.3 exon 80726616 80726729 80726616 ID=MS.gene049204.t1.exon4;Parent=MS.gene049204.t1
chr3.3 CDS 80726616 80726729 80726616 ID=cds.MS.gene049204.t1;Parent=MS.gene049204.t1
chr3.3 exon 80726820 80726858 80726820 ID=MS.gene049204.t1.exon5;Parent=MS.gene049204.t1
chr3.3 CDS 80726820 80726858 80726820 ID=cds.MS.gene049204.t1;Parent=MS.gene049204.t1
Gene Sequence

>MS.gene049204

ATGCAGAAGGGAAAACACAAACACGATTGCCGCTCTTTCTCTTTGCCATTTCAAAGCAGCAGCGGTGACAAACACGATTGCCGCTCTTTTTCCTTGCCATTTCCGCCTCCGATGACAACCTCTGCTGCGCCGCTTGATAGTCTGGCATCGTAAGGTTCGTTTCTTTCTTCCTTATCTTTTTTTTTCCTTCATCTTTTGAATAGTTATGGTCATGAGAACAAACAAAAACCAAAATCAAAATTAAAATAGGAATAACTACACTTGATTAGGGAAAGAAAACAAAGCTTTTGAACCAATTTCAATTCTGTAGGATTAGATTTTAAGAAATTTAGGGTTTTATTTTAGGATTGAAGTAAACCCATTGCAAGGGGTAAATATGCTCTGTTTTTTAGGAGCAATACATATGCTCTGTTTAATAGCTAAACATTAGATGAATTAGGTTTGTGTAGCTTTTGTTGCGTGTTATCGAGTATGCAGGTTGGAGCTTCATTTTTGGAGCTGTTGTGTTTTTTATTTCTGTTTGTCTGTCATATCAGTGGTGGTGGTTTAAATTTGGTCTGATGTCTGAGTAGGTACCTTCATTTGGATGTATTGTTAACCTGTTTAGTGACACTCCTTGTTCTTACCTCTTTTATTTACCTGTCAGGTACCTTCATTTGGGTATTTGACATGGCTTCTTCAAATGATGATTGGAAGCCAAAACTTGGAATGAAATTTGACACTAGAGAAGAGGCTGAACAATTTTACCTTGCTTATGCTTTACGTGAGGGCTTCGGAGTTAGAGTACGCTTTACAAACAGGAAGAAAGACGGTAGTGTATCGTCATGTAGGTTTGTTTGTTGTAAGGAAGGAATACGGAAGAAAGAGGATAAATGTGCATATGAAGGAAAAATTCGGAGAGGCGAGACTAGAACGAAATGCTTAGCAAGAATTACACTTTCAAGTATAGATGGAAAGTTGGTTATCAATGAGTTTGTAGAAAAACATAACCATGATCTACTAAATCAAGAGACAACGCACATGCTTCGATCACATAGAAAGATAACTGAAGTACAAGCATATGAGATTGATATGGCCGATGACTCTGGATTAAGGCAGAAGGAAGTGTATCAACTTATGAGCACACATGCAGGGCATATCGCTAATGTTGGATTTACAGAGGTGGATGTAAGAAACTACATCACTACCAAAAGACAAAGAAGTATGGTGTATGGTGACGTTGGATATCTTTCACAGTATTTTCAACGACAGTTGTTGGAGAATCCGTCCTTCTTTTATGCATATCAGATGGATATAGATGAACAGATTACAAATGTGTTCTGGTGTGATGCAAATATGATCTTGGATTATGGGTATTTTGGTGATGTTGTTTCATTGGACACCACATATTGTACCAACGATGCCAATAGACCACTTGCTTTTTTTTCTGGTTTCAACCATTATAGAGGTACGATCATTTTTGGTGCAGCTCTAATGTATGATGAGACAATTCCATCATTTAAATGGTTGTTTGAAACATTCTTACAAGCACACAACAACAAAAACCCAAAGACGATCTTCACTGACCAAAGTCAAGCAATGTCTAGGGAAATTGAAGAAGTGATGCCTGAGACTCACCATGGTTTATGCACATGGCACTTGTTGCAGAATGGAATTAAACATCTTGGAAACAGGATGAAGAAAGGAGCTTCTTTGCTAACAGATTTCAGCAAGTGCATGTATGAAATTGGCATTGAAGCAGATTTTGAGAAAGCTTGGTTGCACTTGGTCAATGAACATAATCTTCATGGTTCATCTTGGATCAAGTCAGTTTATGAAATAAAAAAAAAAATGGGCTGCATGTTATATGAAGGAAGCATTAACACTTGGCATGCGAAGTACACAAGTTAGTGAAAGTTTGAATGCTCACTTTAAATGTTGTCTAAAACCGAATTTGGGTATCCTGCAATTCTTGAAACATTTCGAAAGAGTTGTTGGGGAGAAGAGAGAAAAAGAACTGAAATGTGATTATGAATCCTCACATAAGCTTGCAAGGTTAGTGTATGAAACTTCACCATTACTACTCCAAATGGGAGAGATATACACACACACTATATTTGAGTTGTTTCAAAACGAGTTTAAGTTATTCTTGACTTTGTCTGTACCCATTAGACATGAAACTGACTCTCTATGTGAATATGTCATCACTAATGAGAAGCATGAAGGGTCTTTTAGAGTGTCATTTAATCGTGTTTCAACTTCCATTACTTGTAGTTGTAAGAAGTATGATACATTTGGCATACTTTGTTCGCATGCATTAAAAGTATTTGAGCTGAACGATGTTAAGGTGATTCCTGATAGGTATATTTTAAGAAGGTGGACAAGAGAAGCCCGTTGTGGCATTGTGCAAGATTTTAGGGGAAAAGAGGTTGAACAAGATCCTAAGTTATCTAGAAACCGAATGTTCAGACAAGTTGTCTCTAAGTTCATTAGAGCGGCAACTGTAGCAGCATCGCATAGTGAAGAAAGTCTCATGTTTGTTGATAAAAGTGTAGATGAAATGTTCAAGAAAGTAACAGAATGTCCAACACAAGGTAGAGACAATGACAATGATCATCCATCATTTGAGAGTTCTGATGCCATGCAACCAAAGGGATTCAAGAAACAACCCGGCTCAAAGGGAACTAAGCGACATAAAAGTTTCCTTGAGCGTCAACCCAAGAAAAGAAGTGCTCCTCCAAGTAAACACGCTCAATCTAGCCGTGTTCCACCTCAAAGAAGTTCACAGGTATATAAGTTGATATGTAGATTACTTGTTTTAGTTTTACATGTACTTTCACTTATTTTAATGTTGCATAATCATTTTAGGTTAGAGAATTAACAACTAATATGGTCGATGGAGTATCTTGTTCCGCGCCCCCAACTTATGAGCCCCCGCTAGCACGTGAGGATATGTTTGTTAGTTACACAACTACGTTGATGGTAATTTCATATTTTTTTTCATAACTATTCTTATACTAATTATTTTTCATCACACAATCATGATTTAATTATTTTTTGTTATTAATGTAGGCACCTTTTGATGATACAAATATTGGAGCATTACTTTGA
Protein sequence

>MS.gene049204.t1

MQKGKHKHDCRSFSLPFQSSSGDKHDCRSFSLPFPPPMTTSAAPLDSLASYLHLDVLLTCLVTLLVLTSFIYLSGTFIWVFDMASSNDDWKPKLGMKFDTREEAEQFYLAYALREGFGVRVRFTNRKKDGSVSSCRFVCCKEGIRKKEDKCAYEGKIRRGETRTKCLARITLSSIDGKLVINEFVEKHNHDLLNQETTHMLRSHRKITEVQAYEIDMADDSGLRQKEVYQLMSTHAGHIANVGFTEVDVRNYITTKRQRSMVYGDVGYLSQYFQRQLLENPSFFYAYQMDIDEQITNVFWCDANMILDYGYFGDVVSLDTTYCTNDANRPLAFFSGFNHYRGTIIFGAALMYDETIPSFKWLFETFLQAHNNKNPKTIFTDQSQAMSREIEEVMPETHHGLCTWHLLQNGIKHLGNRMKKGASLLTDFSKCMYEIGIEADFEKAWLHLVNEHNLHGSSWINCKKYDTFGILCSHALKVFELNDVKVIPDRYILRRWTREARCGIVQDFRGKEVEQDPKLSRNRMFRQVVSKFIRAATVAASHSEESLMFVDKSVDEMFKKVTECPTQGRDNDNDHPSFESSDAMQPKGFKKQPGSKGTKRHKSFLERQPKKRSAPPSKHAQSSRVPPQRSSQVRELTTNMVDGVSCSAPPTYEPPLAREDMFVSYTTTLMAPFDDTNIGALL