AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene049465

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene049465.t1 MTR_3g465800 96.406 473 16 1 1 472 1 473 0.0 961
MS.gene049465.t1 MTR_3g465800 97.236 398 11 0 75 472 5 402 0.0 806
MS.gene049465.t1 MTR_7g072420 69.130 460 142 0 13 472 22 481 0.0 694
MS.gene049465.t1 MTR_8g091660 62.356 433 163 0 40 472 49 481 0.0 593
MS.gene049465.t1 MTR_3g465790 96.903 226 7 0 481 706 1 226 3.74e-157 453
MS.gene049465.t1 MTR_7g451450 32.947 431 241 12 52 469 68 463 2.44e-59 207
MS.gene049465.t1 MTR_4g076100 27.725 422 267 14 73 464 80 493 2.45e-40 155
MS.gene049465.t1 MTR_3g465840 70.652 92 21 1 60 151 55 140 3.30e-35 131
MS.gene049465.t1 MTR_4g076100 26.822 343 216 11 149 464 15 349 1.16e-31 127
MS.gene049465.t1 MTR_3g089960 36.364 231 62 7 282 472 20 205 1.90e-29 117
MS.gene049465.t1 MTR_7g031840 35.833 240 68 6 265 469 26 214 4.88e-28 113
MS.gene049465.t1 MTR_3g118070 27.893 337 209 9 50 365 37 360 4.70e-20 94.4
MS.gene049465.t1 MTR_3g118070 28.667 300 195 7 72 365 17 303 1.99e-19 91.7
MS.gene049465.t1 MTR_4g045917 43.590 117 33 4 318 434 8 91 2.51e-17 78.6
MS.gene049465.t1 MTR_7g012080 67.391 46 13 2 318 363 8 51 3.69e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene049465.t1 AT3G08860 70.159 439 131 0 34 472 43 481 0.0 683
MS.gene049465.t1 AT2G38400 67.457 464 148 2 11 472 15 477 0.0 678
MS.gene049465.t1 AT3G08860 69.647 425 129 0 34 458 43 467 0.0 658
MS.gene049465.t1 AT2G38400 65.801 462 155 2 11 470 15 475 0.0 656
MS.gene049465.t1 AT4G39660 62.557 438 164 0 35 472 39 476 0.0 606
MS.gene049465.t1 AT4G39660 65.075 398 139 0 75 472 4 401 0.0 568
MS.gene049465.t1 AT5G26110 78.761 226 48 0 481 706 1 226 4.42e-127 376
MS.gene049465.t1 AT5G26110 78.761 226 48 0 481 706 1 226 4.42e-127 376
MS.gene049465.t1 AT5G26110 79.012 162 34 0 545 706 2 163 2.62e-88 274
MS.gene049465.t1 AT1G80600 31.579 418 245 10 66 472 69 456 8.26e-60 208
MS.gene049465.t1 AT5G46180 29.009 424 262 13 68 475 53 453 4.65e-42 159
MS.gene049465.t1 AT3G22200 27.002 437 278 13 74 476 79 508 9.65e-41 157
MS.gene049465.t1 AT3G22200 27.002 437 278 13 74 476 70 499 9.88e-41 156
MS.gene049465.t1 AT1G08120 65.714 70 21 1 481 550 5 71 8.94e-22 90.5
MS.gene049465.t1 AT3G48730 27.907 301 194 7 73 365 79 364 1.43e-20 95.9
MS.gene049465.t1 AT5G63570 26.087 299 202 7 73 365 81 366 5.29e-17 85.1
MS.gene049465.t1 AT5G63570 26.000 300 203 7 72 365 17 303 6.57e-17 84.0

Find 149 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTAAAGGAATTTGATATTA+TGG 0.109939 3.2:-56647627 MS.gene049465:CDS
GTGATTGAATTGTGGCATTT+TGG 0.188349 3.2:+56653794 None:intergenic
AATCATAATGTTGTTGATTT+TGG 0.189803 3.2:-56653397 MS.gene049465:CDS
GTCGAACCGGTAGTCACTTT+TGG 0.220873 3.2:-56651520 MS.gene049465:CDS
ACATTGAAGGGTTAAATTAA+AGG 0.232713 3.2:-56647642 MS.gene049465:intron
TGTTGTTGGATCATATTTAA+AGG 0.242745 3.2:-56650472 MS.gene049465:CDS
CTTTGTTGCTGAGGCCATTC+AGG 0.257819 3.2:-56651929 MS.gene049465:intron
TAAAATAGTATGCATATTTC+AGG 0.260302 3.2:+56650583 None:intergenic
TTTGCCAATGTTACAATATC+AGG 0.283981 3.2:+56651473 None:intergenic
TTAAAGGAATTTGATATTAT+GGG 0.293100 3.2:-56647626 MS.gene049465:CDS
GAAGTACAGACATCCGATTT+TGG 0.315543 3.2:-56647089 MS.gene049465:CDS
GATGAGGTTCAGTCAGGTTT+TGG 0.320080 3.2:-56651542 MS.gene049465:CDS
AAAGATGTATTTCTTGAATT+CGG 0.327087 3.2:-56646512 MS.gene049465:CDS
ATTGGTAATGGTGCACCTAT+TGG 0.335165 3.2:-56650639 MS.gene049465:CDS
TTGGTAATGGTGCACCTATT+GGG 0.340512 3.2:-56650638 MS.gene049465:CDS
GCTTACTGGGTGGTTGTAAT+AGG 0.341228 3.2:+56653692 None:intergenic
CAATATGTGTATGATGAAAA+TGG 0.365007 3.2:-56653544 MS.gene049465:CDS
AAAACTCCTCTGTATGGATC+TGG 0.367031 3.2:+56652027 None:intergenic
GCCATGGTAACCATTTCTAA+TGG 0.372182 3.2:+56652607 None:intergenic
CACGATGGTGGTCTTGTTCA+TGG 0.374963 3.2:-56646419 MS.gene049465:CDS
TCTTTGTCGTCTCAGGGAAT+TGG 0.376936 3.2:-56650657 MS.gene049465:intron
CAGCAAAATGCATATGTTGT+TGG 0.384645 3.2:-56650486 MS.gene049465:CDS
GGCAAGATTGCATCTCAAAT+TGG 0.384705 3.2:-56646461 MS.gene049465:CDS
CTCTGTATGGATCTGGGTTA+AGG 0.391359 3.2:+56652034 None:intergenic
CAGATATGGGAGTGCTAGTT+GGG 0.391625 3.2:-56649922 MS.gene049465:CDS
AATCCTGTTTGTGCTTCTGC+TGG 0.392066 3.2:-56650546 MS.gene049465:CDS
ACAATTGCTTCAACAACATC+AGG 0.395543 3.2:+56653463 None:intergenic
GGAACTTGTGGTCGTGTAGC+TGG 0.398777 3.2:-56651952 MS.gene049465:CDS
AATGGTGGCACAGTTAAATC+TGG 0.399670 3.2:-56653581 MS.gene049465:intron
GATATAATTTCCATTAGAAA+TGG 0.402046 3.2:-56652617 MS.gene049465:CDS
GGACCGTCTTAATTCACTAA+TGG 0.402181 3.2:-56650451 MS.gene049465:CDS
ATTGGTGATGTACGGGGAAG+GGG 0.411305 3.2:-56650315 MS.gene049465:CDS
ATCTTCATTGCTTCGAGCTA+TGG 0.413250 3.2:+56653833 None:intergenic
CAACCAAGGCAAGGCGACTT+GGG 0.419060 3.2:-56646613 MS.gene049465:CDS
GAGTTGAACTTGTGAAAGAT+AGG 0.428137 3.2:-56650281 MS.gene049465:CDS
AGAAGATATCTTGATGCATT+TGG 0.433307 3.2:-56653520 MS.gene049465:CDS
ACCACTGCTTCGATGATTTG+CGG 0.435224 3.2:+56645120 None:intergenic
GTGTAGGTTCTTATTGACTT+TGG 0.438221 3.2:-56646239 MS.gene049465:intron
ACAACCAAGGCAAGGCGACT+TGG 0.438223 3.2:-56646614 MS.gene049465:CDS
TCACAAGTTTAATGTTGTAC+AGG 0.449459 3.2:-56652546 MS.gene049465:intron
ATTGAAACCTTGAGTTCTCC+TGG 0.449980 3.2:+56653352 None:intergenic
GTAATAGGTGTTAACAAAAG+TGG 0.453013 3.2:+56653707 None:intergenic
GGCAGTAATTGGTGATGTAC+GGG 0.458326 3.2:-56650322 MS.gene049465:intron
AGATGTTGAAGGGCCATTGT+AGG 0.459732 3.2:+56653761 None:intergenic
GTTAACTTAGCATCCAAAAT+CGG 0.459784 3.2:+56647076 None:intergenic
GTTGTTACAACTGCCCCAAT+AGG 0.460189 3.2:+56650624 None:intergenic
AAATCGACGGCTTTATCTTC+TGG 0.462118 3.2:+56646194 None:intergenic
TCAGATATGGGAGTGCTAGT+TGG 0.467196 3.2:-56649923 MS.gene049465:intron
TAAACTGCAGGCAAGTATCC+TGG 0.469922 3.2:+56651602 None:intergenic
TGTTCCTGATATTGTAACAT+TGG 0.473611 3.2:-56651477 MS.gene049465:CDS
AACCCCAAGTCGCCTTGCCT+TGG 0.476565 3.2:+56646610 None:intergenic
TTGATGATGTTATAAACTGC+AGG 0.477391 3.2:+56651590 None:intergenic
TTCTAATGGAAATTATATCA+TGG 0.484996 3.2:+56652621 None:intergenic
GTTCAAGATATAATTAATCA+TGG 0.486727 3.2:-56651973 MS.gene049465:CDS
ATAGCTGATGAGGTTCAGTC+AGG 0.488386 3.2:-56651548 MS.gene049465:CDS
CGGGGAAGGGGAATGTTGCT+TGG 0.488451 3.2:-56650303 MS.gene049465:CDS
ATAGACCTTTCATCTGTTCG+AGG 0.489031 3.2:+56650220 None:intergenic
AGTGGGTGGAGTCATAGAAT+TGG 0.497847 3.2:-56651627 MS.gene049465:CDS
ACCTCCACTTTGCTTCACTA+AGG 0.498594 3.2:-56649864 MS.gene049465:CDS
TCGTCTCAGGGAATTGGTAA+TGG 0.499266 3.2:-56650651 MS.gene049465:intron
AATTGGTGATGTACGGGGAA+GGG 0.499572 3.2:-56650316 MS.gene049465:CDS
AATCCAGCAGAAGCACAAAC+AGG 0.500786 3.2:+56650543 None:intergenic
GGAGTGCTAGTTGGGAAAGG+TGG 0.501353 3.2:-56649914 MS.gene049465:CDS
ATATATCAGTATTACCTGAA+TGG 0.505827 3.2:+56651915 None:intergenic
TGGCAGTAATTGGTGATGTA+CGG 0.506735 3.2:-56650323 MS.gene049465:intron
CATCATCAAAGCTAACTCAT+TGG 0.507503 3.2:+56652664 None:intergenic
TGGTGCTTGACACAGGGAGT+GGG 0.507550 3.2:-56651644 MS.gene049465:intron
TAATAGGTGTTAACAAAAGT+GGG 0.509332 3.2:+56653708 None:intergenic
TTTATGAGATCAGATGTTGA+AGG 0.510625 3.2:+56653750 None:intergenic
GATGTTGAAGGGCCATTGTA+GGG 0.518480 3.2:+56653762 None:intergenic
GCACTTGCTGCTAAGATGCC+AGG 0.518559 3.2:-56653370 MS.gene049465:CDS
AGATATCTTGATGCATTTGG+TGG 0.522280 3.2:-56653517 MS.gene049465:CDS
TAAAGGAATTTGATATTATG+GGG 0.522816 3.2:-56647625 MS.gene049465:CDS
TGCTTGACACAGGGAGTGGG+TGG 0.523668 3.2:-56651641 MS.gene049465:intron
GAAGGGCCATTGTAGGGAGC+TGG 0.524624 3.2:+56653768 None:intergenic
TGCTTCACTAAGGAAGATGC+AGG 0.525908 3.2:-56649854 MS.gene049465:intron
AAAGAATGATACTGATCAGT+TGG 0.526434 3.2:-56646369 MS.gene049465:intron
CAATGAGTTAGCTTTGATGA+TGG 0.527586 3.2:-56652663 MS.gene049465:CDS
TCCATTAGAAATGGTTACCA+TGG 0.529786 3.2:-56652608 MS.gene049465:CDS
AAACTCCTCTGTATGGATCT+GGG 0.531372 3.2:+56652028 None:intergenic
TATAGTCCATCACATCTACT+AGG 0.534541 3.2:+56649722 None:intergenic
TTAACATTTGAATTTGTCGA+TGG 0.536270 3.2:-56646545 MS.gene049465:CDS
GGAGTCATAGAATTGGCTCC+AGG 0.536347 3.2:-56651620 MS.gene049465:CDS
ATAATTAATCATGGAACTTG+TGG 0.536419 3.2:-56651964 MS.gene049465:CDS
TACCCCTGTGTTATATGCTG+TGG 0.540309 3.2:-56646585 MS.gene049465:CDS
TAATTGGTGATGTACGGGGA+AGG 0.542450 3.2:-56650317 MS.gene049465:CDS
GTTTCGATGCATTCTTCATG+TGG 0.542927 3.2:-56646149 MS.gene049465:CDS
AGAAATACATCTTTGACTGA+AGG 0.543009 3.2:+56646521 None:intergenic
GGCACAGTTAAATCTGGTGG+AGG 0.544824 3.2:-56653575 MS.gene049465:intron
TGATATTGTAACATTGGCAA+AGG 0.545747 3.2:-56651471 MS.gene049465:intron
TGCAGCCACGAAAATTTATG+TGG 0.547667 3.2:-56653896 MS.gene049465:CDS
TTCATTGCTTCGAGCTATGG+TGG 0.554415 3.2:+56653836 None:intergenic
ATGAAGAATGCATCGAAACA+AGG 0.554852 3.2:+56646153 None:intergenic
GTCTGCAAGCTTGTTCATTG+TGG 0.559060 3.2:+56645094 None:intergenic
TGGTAATGGTGCACCTATTG+GGG 0.561380 3.2:-56650637 MS.gene049465:CDS
TTCTAAAACATACAAATCGA+CGG 0.561624 3.2:+56646181 None:intergenic
AATGTTAAAGTGTGCAACAC+AGG 0.565875 3.2:+56646560 None:intergenic
AGGTCTCTTTATAGCTGATG+AGG 0.569218 3.2:-56651558 MS.gene049465:CDS
TTTCTTGAATTCGGATCATG+TGG 0.569490 3.2:-56646503 MS.gene049465:CDS
GGACGAAAGAGGACCATGGT+TGG 0.570787 3.2:-56644976 MS.gene049465:CDS
TTATGAGATCAGATGTTGAA+GGG 0.573939 3.2:+56653751 None:intergenic
ATGGGAGTGCTAGTTGGGAA+AGG 0.574605 3.2:-56649917 MS.gene049465:CDS
TTTCCATTAGTGAATTAAGA+CGG 0.574678 3.2:+56650448 None:intergenic
TGTAGCTGGCTTTGTTGCTG+AGG 0.583977 3.2:-56651938 MS.gene049465:CDS
ATTGCTTCGAGCTATGGTGG+TGG 0.585939 3.2:+56653839 None:intergenic
CGCAGTGACACTCATAGTTG+AGG 0.586661 3.2:+56652577 None:intergenic
GGCATCAATGAAGAGCGGTT+AGG 0.593530 3.2:-56646482 MS.gene049465:CDS
CGAGGTGCACAACCAAGGCA+AGG 0.594894 3.2:-56646622 MS.gene049465:CDS
AGATTTCCTAGTAGATGTGA+TGG 0.597571 3.2:-56649728 MS.gene049465:CDS
AAAGCCCCAAAAGTGACTAC+CGG 0.601057 3.2:+56651514 None:intergenic
AACCAAGGCAAGGCGACTTG+GGG 0.602601 3.2:-56646612 MS.gene049465:CDS
TGCGACAAAGAGGACGAAAG+AGG 0.603308 3.2:-56644987 MS.gene049465:CDS
GGTGGCACAGTTAAATCTGG+TGG 0.604660 3.2:-56653578 MS.gene049465:intron
TTGTTTGATGAGAATGAGAG+AGG 0.606756 3.2:+56647580 None:intergenic
ATAGCTCGAAGCAATGAAGA+TGG 0.608634 3.2:-56653831 MS.gene049465:CDS
GGATCCACAGCATATAACAC+AGG 0.609862 3.2:+56646581 None:intergenic
GTTAAGGACATGGTGAACTC+CGG 0.610219 3.2:+56652050 None:intergenic
CAGATCCTCGAACAGATGAA+AGG 0.612119 3.2:-56650225 MS.gene049465:intron
CACACTCCAGCTCCCTACAA+TGG 0.613222 3.2:-56653774 MS.gene049465:CDS
TAAGATGCCAGGAGAACTCA+AGG 0.616212 3.2:-56653359 MS.gene049465:intron
ACCGCAAATCATCGAAGCAG+TGG 0.617260 3.2:-56645121 MS.gene049465:CDS
ATGATGGCGAGGCTGTACAC+TGG 0.627100 3.2:-56652647 MS.gene049465:CDS
TGAAGAATGCATCGAAACAA+GGG 0.628508 3.2:+56646154 None:intergenic
GGAATTGCTACTGTTTCATG+TGG 0.631176 3.2:-56653496 MS.gene049465:CDS
GGAGGCGAGGTGCACAACCA+AGG 0.637554 3.2:-56646627 MS.gene049465:CDS
CAAATTGTAGTGCGACAAAG+AGG 0.641363 3.2:-56644997 MS.gene049465:intron
GCTGGAGTGTGATTGAATTG+TGG 0.644172 3.2:+56653786 None:intergenic
GATCCACAGCATATAACACA+GGG 0.645198 3.2:+56646582 None:intergenic
ACAATGAACAAGCTTGCAGA+CGG 0.653580 3.2:-56645092 MS.gene049465:intron
ATTGCAAAGTTACACGATGG+TGG 0.654578 3.2:-56646431 MS.gene049465:CDS
GCATTCTTCATGTGGTAATG+TGG 0.655251 3.2:-56646141 MS.gene049465:intron
CAATTGCTTCAACAACATCA+GGG 0.655567 3.2:+56653464 None:intergenic
TCTCTCATTCTCATCAAACA+AGG 0.656080 3.2:-56647578 MS.gene049465:CDS
TCCTTAGTGAAGCAAAGTGG+AGG 0.658628 3.2:+56649863 None:intergenic
TCTTCCTTAGTGAAGCAAAG+TGG 0.659144 3.2:+56649860 None:intergenic
AACACTCAAGCGCTTAAATG+CGG 0.667698 3.2:-56647056 MS.gene049465:intron
TAGTTGAGGATGCATTGCCA+TGG 0.669409 3.2:+56652591 None:intergenic
GCACAGTTAAATCTGGTGGA+GGG 0.672027 3.2:-56653574 MS.gene049465:intron
AGTTAGCTTTGATGATGGCG+AGG 0.681091 3.2:-56652658 MS.gene049465:CDS
GCAGTAATTGGTGATGTACG+GGG 0.687363 3.2:-56650321 MS.gene049465:intron
ATGGATCTGGGTTAAGGACA+TGG 0.689704 3.2:+56652040 None:intergenic
GCAGCCACGAAAATTTATGT+GGG 0.689943 3.2:-56653895 MS.gene049465:CDS
AACTCAGAATCATCCAACCA+TGG 0.691341 3.2:+56644963 None:intergenic
TGTGGGACAAAATTTGCATG+TGG 0.702827 3.2:-56653878 MS.gene049465:CDS
CATGTGGCATCAATGAAGAG+CGG 0.710732 3.2:-56646487 MS.gene049465:CDS
AAGAGGACGAAAGAGGACCA+TGG 0.717008 3.2:-56644980 MS.gene049465:CDS
CTTAACCCAGATCCATACAG+AGG 0.720427 3.2:-56652033 MS.gene049465:CDS
GTAATTGCAAAGTTACACGA+TGG 0.807657 3.2:-56646434 MS.gene049465:CDS
ATCCACAGCATATAACACAG+GGG 0.823142 3.2:+56646583 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr3.2 gene 56644972 56653919 56644972 ID=MS.gene049465
chr3.2 mRNA 56644972 56653919 56644972 ID=MS.gene049465.t1;Parent=MS.gene049465
chr3.2 exon 56653698 56653919 56653698 ID=MS.gene049465.t1.exon1;Parent=MS.gene049465.t1
chr3.2 CDS 56653698 56653919 56653698 ID=cds.MS.gene049465.t1;Parent=MS.gene049465.t1
chr3.2 exon 56653360 56653590 56653360 ID=MS.gene049465.t1.exon2;Parent=MS.gene049465.t1
chr3.2 CDS 56653360 56653590 56653360 ID=cds.MS.gene049465.t1;Parent=MS.gene049465.t1
chr3.2 exon 56652547 56652717 56652547 ID=MS.gene049465.t1.exon3;Parent=MS.gene049465.t1
chr3.2 CDS 56652547 56652717 56652547 ID=cds.MS.gene049465.t1;Parent=MS.gene049465.t1
chr3.2 exon 56651930 56652073 56651930 ID=MS.gene049465.t1.exon4;Parent=MS.gene049465.t1
chr3.2 CDS 56651930 56652073 56651930 ID=cds.MS.gene049465.t1;Parent=MS.gene049465.t1
chr3.2 exon 56651472 56651651 56651472 ID=MS.gene049465.t1.exon5;Parent=MS.gene049465.t1
chr3.2 CDS 56651472 56651651 56651472 ID=cds.MS.gene049465.t1;Parent=MS.gene049465.t1
chr3.2 exon 56650439 56650664 56650439 ID=MS.gene049465.t1.exon6;Parent=MS.gene049465.t1
chr3.2 CDS 56650439 56650664 56650439 ID=cds.MS.gene049465.t1;Parent=MS.gene049465.t1
chr3.2 exon 56650226 56650339 56650226 ID=MS.gene049465.t1.exon7;Parent=MS.gene049465.t1
chr3.2 CDS 56650226 56650339 56650226 ID=cds.MS.gene049465.t1;Parent=MS.gene049465.t1
chr3.2 exon 56649855 56649941 56649855 ID=MS.gene049465.t1.exon8;Parent=MS.gene049465.t1
chr3.2 CDS 56649855 56649941 56649855 ID=cds.MS.gene049465.t1;Parent=MS.gene049465.t1
chr3.2 exon 56649709 56649748 56649709 ID=MS.gene049465.t1.exon9;Parent=MS.gene049465.t1
chr3.2 CDS 56649709 56649748 56649709 ID=cds.MS.gene049465.t1;Parent=MS.gene049465.t1
chr3.2 exon 56647568 56647655 56647568 ID=MS.gene049465.t1.exon10;Parent=MS.gene049465.t1
chr3.2 CDS 56647568 56647655 56647568 ID=cds.MS.gene049465.t1;Parent=MS.gene049465.t1
chr3.2 exon 56647057 56647170 56647057 ID=MS.gene049465.t1.exon11;Parent=MS.gene049465.t1
chr3.2 CDS 56647057 56647170 56647057 ID=cds.MS.gene049465.t1;Parent=MS.gene049465.t1
chr3.2 exon 56646370 56646648 56646370 ID=MS.gene049465.t1.exon12;Parent=MS.gene049465.t1
chr3.2 CDS 56646370 56646648 56646370 ID=cds.MS.gene049465.t1;Parent=MS.gene049465.t1
chr3.2 exon 56646142 56646255 56646142 ID=MS.gene049465.t1.exon13;Parent=MS.gene049465.t1
chr3.2 CDS 56646142 56646255 56646142 ID=cds.MS.gene049465.t1;Parent=MS.gene049465.t1
chr3.2 exon 56645093 56645165 56645093 ID=MS.gene049465.t1.exon14;Parent=MS.gene049465.t1
chr3.2 CDS 56645093 56645165 56645093 ID=cds.MS.gene049465.t1;Parent=MS.gene049465.t1
chr3.2 exon 56644972 56645009 56644972 ID=MS.gene049465.t1.exon15;Parent=MS.gene049465.t1
chr3.2 CDS 56644972 56645009 56644972 ID=cds.MS.gene049465.t1;Parent=MS.gene049465.t1
Gene Sequence

>MS.gene049465

ATGCAGCCACGAAAATTTATGTGGGACAAAATTTGCATGTGGCAGAATCGTGTGTTCTCCACCACCATAGCTCGAAGCAATGAAGATGGTATCAATTTTCTTCCCAAAATGCCACAATTCAATCACACTCCAGCTCCCTACAATGGCCCTTCAACATCTGATCTCATAAAGAGAAGAAATCAGTATCTTCCCACTTTTGTTAACACCTATTACAACCACCCAGTAAGCAGTTTTTATCTCCCACAAGAGTGTTTTTTCTTTGATGAAATGTTTTTGCATGAAGAAAAAAACTATACTTATTTTTTTAATTATTTTAAATGGTGGCACAGTTAAATCTGGTGGAGGGTAAAATGCAATATGTGTATGATGAAAATGGTAGAAGATATCTTGATGCATTTGGTGGAATTGCTACTGTTTCATGTGGTCATTGTCACCCTGATGTTGTTGAAGCAATTGTTAATCAGACTAAGCTTTTGCAACATACTACTGTTCTTTATTTGAATCATAATGTTGTTGATTTTGGTGAGGCACTTGCTGCTAAGATGCCAGGAGAACTCAAGGTTTCAATTTTTTATTTATATTTTTATTTTTTTTAAATTTGTTTGAGGTTTAGATGCTAACATATTGTTTTGGATAAATCAGCATTTTAGTCATCAAAATTGTAACGGTTGAGCAATTTAGTCCCTCAAATTTATCAATAAAAATTAGTTTTTGAAATTAAAAAAGATAGATCAATAATCAAGTGATTAATGAATTTTAGTTGAGACAAATTGTTAGAGCGAACCCGAGTTCGAATTCTGGTTGGAACAATCCTTGCCAGGTTTTACATACCTCTAGCCAAACACCGGGTTACCAAGGCTTTTTTTCTCCTCGGAACCTAAGAGTTAAGACAAAAGATCAATCCATTACGTCACTCATTCTGGGAGATAGTCTCTTTTTGAATAATGATCAATCCATCAAAATTTAATGAAAAACTTACATAATGATTTGGATATTCTCTCTTTGCATCAAGATAAGTATAAAACATTTAGAATTGTAGTGCTAAATTTGGAAAAAAGAATTAAGTTGACCAACATTTTTCAATTTAAGGCACTAAATTGGCAGAACCTTACAAATTCAAGGTCTAAGATGATGATTTGATCATTCTTTTTCACCACAGCTGAGTTATTTACTATATTGATGAATATAATTCATTTTTCAAGGCTGTTTTCTTCACAAATTCGGGGACAGAAGCCAATGAGTTAGCTTTGATGATGGCGAGGCTGTACACTGGATGCCATGATATAATTTCCATTAGAAATGGTTACCATGGCAATGCATCCTCAACTATGAGTGTCACTGCGCAGTTTTATCACAAGTTTAATGTTGTACAGGTGACACTTTTTCTCTTATAATGATGGTATGTTTTGTGAGAAACAGTTCTTGTTTATATCTGTTATAGCATCAATTAAGCTCACAAAAACAACTCCATTGTTGTTTTGCTGGGATGTCAGCATAGTTGAGATGTCGGTAATTCATAATGATGGTAATTCATAATGATGCCTTTGTACTTTTAATTTTCTCCAAAGAGAAGTTCACAAAAACAAAAATAACTACTAATTGCATCAATTATGAAGCACGGACACTCCTCGGATTAAGTGTGTCCCCATGTCGGACACATGTTGTGTTCGACACTGACACGACATTGACACATATAATTACATTGAATTATATTGAATTATGTAATTTTCTCAAATTATTAGCGGTGTCAGCTTGTTAAAGTCTGTGTCGTGTCTGGTGTCTGTGTCCGTGTCCGTCTCCGTGCTTCATAGATTTCTTATCCTTGGTATTGTTTCTATGGGAGTAGACCGGAGTTCACCATGTCCTTAACCCAGATCCATACAGAGGAGTTTTTGGTTTGGATGGAGCGAAATATGCAAATGATGTTCAAGATATAATTAATCATGGAACTTGTGGTCGTGTAGCTGGCTTTGTTGCTGAGGCCATTCAGGTAATACTGATATATGCCATTTATTAATTGAGTTTAATTTTGATATACGATTAGTGTAAAAGTTCTACACTAGTTATCGTTAAAGGAAAACGTTTTTGATGATCTGACGATTATGGTTGCTTGATAGTGTAAAAGATCTTTACACCGGTGGTGTATATGAATTAAATTCTTATTAACTTATCAGTGTAACATAGAAATAAACATAATGGTACTTGCTCACTCTCATAAATTTGCGAAGGGGTTCATATTATTTACTGAAAGGTTGGTGCTTGACACAGGGAGTGGGTGGAGTCATAGAATTGGCTCCAGGATACTTGCCTGCAGTTTATAACATCATCAAAAAAGCAGGAGGTCTCTTTATAGCTGATGAGGTTCAGTCAGGTTTTGGTCGAACCGGTAGTCACTTTTGGGGCTTTGAGGCACATGGAATTGTTCCTGATATTGTAACATTGGCAAAGGTAACAACACTTCTTTAGTAGTAATAAGCAGCATTGGTGAGTTTTTGACACCATTTTTAGAGAAATCAATGAACTTATAGCAATGAATTGGCACATACGTGCACTCAGGCACGACACTCGTGTGAATCATTAAAAGTACTATCTTTTAGATTCTGTGAACACAAACTACACAAGACAGGTGCCATGATAATCAGCATCTCATGTCTAAATAATGCTTATGATTATACACAATCTTTGATTTCATATAAGGTTTAAGGAAATCTCCAATTTGTCTATGCTAAGATTCAAAATGAACATTTTCTCTGGCTTATTTGATAGAAATTCCACTAGTTATTGTATAACATTGTATGTATATTGCATGTAATTTCAGTACTACATTAATCCTGCAGTTTTATTTGGTGAACATTTATGAAGCCATCCTTAAATTACAGAAGTGTGGAAACTGGAAAGTAGTGCTAGCTTTTTTGAACAGTTGAACTAATTTGAAATATAATATGCTATGTAGCACCGAAATTTCATATTAATTGCATGTTTGGTGTCAGACGTATGTCAAAGTCTGACACATGTAGTTACATTCAATTACTTTCATTTCTAAAAATATTAGTGGTACCTGTGTGTCAGTAATAGTATCGGTGTTGCGTCTATGTCAGTGCTTAAGAGATAACTTGAAATTCCAGTGACACTGTTAGGAGAACATACCAATTGTCGAACATTATCTTCAAAAACCTACAACTCATGCCCTGCTAAACTTGGTTAATTCATTACATCTCTTTGTATTTTGCGTAACATTATTCTTTGTCGTCTCAGGGAATTGGTAATGGTGCACCTATTGGGGCAGTTGTAACAACTCCTGAGATTGCAAAAGTCCTGAAATATGCATACTATTTTAGCACATTTGGAGGAAATCCTGTTTGTGCTTCTGCTGGATTAGCAGTTCTGAATGTAATTGAGAAAGATAAACTTCAGCAAAATGCATATGTTGTTGGATCATATTTAAAGGACCGTCTTAATTCACTAATGGAAAAGCATGAGCGTAAGCTTCCTTTCTTCCTTTCCATCTTTGGTTTGATGCATAGTGAGCAAAGAAATTTGGATTATGAATACTATTGCTAACATGATTTTCTTATGGCAGTAATTGGTGATGTACGGGGAAGGGGAATGTTGCTTGGAGTTGAACTTGTGAAAGATAGGAAGCTGAAAACTCCTGCAAAAGATGAAAATATGCAGATCCTCGAACAGATGAAAGGTCTATTTCTATTGCTTCTACCCTAAGAATCACTGACATAGACACGACACGGGTAATTCCTGACACGTTGAGACTACTAATATTTTGAGAAAATAGAATAACCGAATGTCGCCCATTTGTGTTTCCCTCGTGTCATATACTAACATGTGTCATACAGTAGATGCGTCTTCAATCTGAAGTGTCTGTGCTACATGTGTTTCCCTCGTGTCATACACTAACATGTGTCATACAGTAGATGAAGTGTCTTGGCTATTGGCTAATATTAAGGTGTTAGTGTTTTTCAGATATGGGAGTGCTAGTTGGGAAAGGTGGTTTTTATGGTAATGTTTTAAGGATTACACCTCCACTTTGCTTCACTAAGGAAGATGCAGGTTGATTGTCATAATCGTCATCACCATTTTCTTTTGATTCCTAATACTCTATTTTGCTATTTTTATTTTTGTTTGCTAATTTAGACTATTTACTTCATAACTGTAGATTTCCTAGTAGATGTGATGGACTATACAATGTCAAAGATGTGAGCAAATGCAATACTAATGGATGAAGAACTTGTTCGAATTTTCTCCCCTAAAAAAAAAAAAAAAAACTTGTTCCAATTCTGACTCCATACTTGGATGTCCTATATAAAACCTGATGATGTAAGCCTAACATATGTGCAAATGTAATGTAAAAGCGAAATCAATAATTGCACTTTTGGGGTTTATTTAATAAAAATGAAAAAATTATCATAAATATTAGAGAATTAGAAATTTGAACATGGTGAGAACTATCTTCACAACTTTTCATACCTCAACTCTAGCACAACCGGTCCGAGGATAAACTTAAGAGTCTGTTTGGGAGCAAGGATTTTATGAGCAGAGGGGAGGATTTTGGGGAAAAAGATGGGAAATTTAAGGGCTTAAAAGATTTTATATTTCTTCATAATACAAAATGTCTCAAAATATGTGTTGGAAGAGGATTTTCGAGAGTTTTAGAGAGCTTAAATAAATAGTTTAAATCCAATATATGTTGTTATACAATGCTCTTATAATTAAAAATATATTAACATAAACATTTTTTTTTTGAGAAAAAAAATTAACATAAACATTTTTTTTTGAATAATATTAACATAAATATTTATTTATCTTTCTCAGCAAAAATGCTTTTTTAAACAAGGCATAAGGTTTCTCTATATTTTCCTCTCATCTCCTCTTCCGAAAGTCCTTGCCTCCCTCTCCCATCTAAACTCTCAAATAGGTCTAATAATAGAAGGGAATGAAGGCAATTCAATTTAGAGGAATGTTAACTAATGCTTTCGAGATACTATTTAAGATCCTTAAATGATAATTTTTTTATGAGAATATGTGTAATTAAAGCATCCGAAATCAAAATATTTGACTTTTCTATAAAATAATTTCTTCCTTTAAAATTTTTAAAGAGTGCTTTAGGGTCACAGGTTAACAAGAACCTTCGATTTATGCAGCATCAATCAATCGGAGAGAATAACATACTTGTTGCCTCTAATTAATAGTTAGCATAAAAAATAATATACTAATATTAAACTAGATAAATGAATAAAAGTTAAATATGTTTTCGCTTCCTATCAATATATAACTTTTTGTTTTAGTCTATTTATTTTATTTTATTTTCGAATTTTTGTCCCCAAATTTTTTTCATCTTCTCGTTTATTGACCAATGGATTAAATTAAATAATAAAAACCTAAAAAATGGTCAAATTTTGAGAAATTTGTAATTGAATTGAAGGAGTCACTTTTTTGTCAAACTTAAAGCTTTTATGTTAAAAAGGACCCTTTTACTCCTTCGACCCTTTAACGCCTTCTACCCTTTTTACCCTTTTGCAAAATAGATGAGTTTGTTTTTTATTGAGTGGAATATAGTGGCTTAGAACTGTAAGAAAATTGAGGTTGCAATGATAAAAAGGACCATTTTACTCCTTCAACCCTTTAACGCCTTCTACCCTTTTACCCTTTTGCAAAAATGGATGAGTTTGTTTTTTATTGAGTGGAATATAGTGGCTTAGAACTGTAAGAAAATTGGGGTTGCAATGATAAAAATGATCATTTTATTCCTTCGACCCTTTAACGCCTTCTACCCTTATACCCTTTTGCAAAAATGGATGAGTTTGTTTTTTATTGAGTGGAATATAAGTAAGAAAATTGGGGTTGCAATGATAAAAAGGACCTTTTACTCCTTCATCCTTCAACGCCTTCTACCCTTTTACCTTTTTTTTGAAATTTTAAGTTAAAAGCCTTCTGTGTTTTCTTTTCTGCAACACAAACTGCACATCGTCGTCCGCCGCCATAAACGGTGAGCTTGTCCGTCCATGTTTTCCCTTATTTTTATGTATTTCAACTATTTTCCTTCTCTCTGTTGCAATTGAGTTCTTGAATTCATGAGTTTGAATTATTCTCGCGCCCTCAAAACCTTCAACCGTCACAATATTTTCTCTATTTTCTACTCTTTAATGTGCATATAAGCTGTTTGTTAAATGTTCTGTGTGAAACCCAAACTTGTTCAACTTCAATTAATACAAAATTCTCTTAACTCTTTTTATATATTTTACATTGAAGGGTTAAATTAAAGGAATTTGATATTATGGGGACTGAAACTGAGTCAACAGATACCTCTCTCATTCTCATCAAACAAGGAGCTGAAGCTGTAAGTTTAATTCACACTTATTGGATTTTCAGTATTAATTTAGCACATACCCATTATGTAAAAAATCAATTTTTTCTTGTTTTTTTTTTATGCACACGCCTTGTTAATTTAAAATTGATTCATGGGCTATGTTTAAAGTTTCAGTCTTTCATTGTGGTAATGTTGTTAGGTAGATGCTATGGCTTAGAGAATTTGAATTGAACAAATTGCTATTGTTTTGTGATATACTATTTAGTACAAAATGTTGTCAAATAGCGGCATTGTGGCATTGTTGTATAGCGAAATTTGAGCAAGCCGCTATTTTTTACTATTTGTGATTGACAATACTAGTTTTGTGAACTTGAAGGAAATTGGATCTGCGCTTATGGCTTTTTATTTTGTCGTCTTGTTGTTGTAGAGGGTTTTTGAGACTTCTTTTGTGGGAAGAAGGTGTGTTGTCAAAGAGAGATTCTCAAAGAAGTACAGACATCCGATTTTGGATGCTAAGTTAACACTCAAGCGCTTAAATGCGGTACGGTCAGATTTATATAAAGTTTCATTTTTATATTTGATTAAGTTTGGCTCTGTTTGGATAAAGAGCTTAATTAAGCACTTGTAGCATAAGCATCATCATATAAGTATTTATCTATAAGCTATATTTGTAACCAAAGATAAAAGTAAGTCAAATTATTTTTATATAAGCTATAAATTATTTTCATAAGCTATCTTGGATAGATTTTGGAAATAAGCTACAACAAATTATAAACTTTTCATAAGCAGTTTCATTAGCTATCACAAACAGTCTCACAGGTGCTTATGCCACTAGATACACTTGAATATAAATCAATCCAAACAAACTCTTATTATTATGATTATGTATATAGTTGTGTCTGATTGGATGTCTTGAATGCTTTGTTCTGCCAATTGGATTTTGGAGTAGGAGGCGAGGTGCACAACCAAGGCAAGGCGACTTGGGGTTTGTACCCCTGTGTTATATGCTGTGGATCCTGTGTTGCACACTTTAACATTTGAATTTGTCGATGGACCTTCAGTCAAAGATGTATTTCTTGAATTCGGATCATGTGGCATCAATGAAGAGCGGTTAGGCAAGATTGCATCTCAAATTGGTGATGTAATTGCAAAGTTACACGATGGTGGTCTTGTTCATGGTGATTTAACAACATCAAACATGTTACTAAAGAATGATACTGATCAGTTGGTGAGTTCATTCATCTCTTAGGTCGTGTAATTAATATTTATTACATTTACTTAGGTTAACAATATGAGAAATATCATTAACTTTTGTTACTGCTGTGATGTGTATTTTGTGTAGGTTCTTATTGACTTTGGTTTGAGCTTCACTTCAACTCTACCAGAAGATAAAGCCGTCGATTTGTATGTTTTAGAAAGAGCCCTTGTTTCGATGCATTCTTCATGTGGTAATGTGGTAAGCCAACTTCTCATTTTCCCAGTAGTCCTAATTGTTATAGTGTTAAATACTAAGGATATAAAAACAGGGTCTTACTTGTCTGTTATGAAAATTTGAATTGAAGTGCAAGTATATTTTAGCTCTCCAAATTCAAGGTCGTACACTTTCCTTCCCTCAACTTTTGTGTAGAGGCTATCTGTCATGCTTGTGACTTTCTTTGACCCAAAAATCATTAAGAGGATAAAGCTTTTATTTATTTTCCTGTTATACTATTAGAATTTTATAGTTTGTGCACTCGAGGCTGATTTGAAATTTTGAACAAAAACTTTAGGACAAAGCATAATTATAAATTATCCATTTGCACTAAAGCTGATGATTTGAAATATCAATACCATGGGATATATATATATATATATATATATATATATATATATATATATATATATATATATATAGGCCGAAAGCAATAAAGACTATTTATATTGGTTTATCTCACAAATGAACTTACCATTATTAACCAACAGTTACGCCTTCCTATGTACCAAATGAACTTTTTTTTTTTTTGAAGAAGCTAAATAGCCCACCTAAATTGGCACCGGAGAGAATCGAACCTGAGACCTTGCAGAGGAGCACACTCCCAAGACCCAAGCCAATACCACCAGGCCAACCCTAGTGGGTTTGTACCAAATGAACTTGATTGCATTTTTTATCTGACAAGGCTGAGACTTACTCCATCCCTCTCATATTATATGTCACTTTTGTAATGTCAGCTCTTCTCAAAATATATCCCTAGAATATCAAGAAGGTATTATTAACCATTTTCAATATCACCCTTATTTACCTGTATATATAACAAGACGAAATATTTTTAACAATAGATAATGCAAGGCAGATTTATAACAAGACAAAATATTTTTAACAATAGATAATGCAACTATATCTGATATAATATAGTTTCTGTACTGATATTGATTATTGAAATCTGTCTGGATAGATGGATCAGATACTTGCTGCTTACCGCAAATCATCGAAGCAGTGGTCATCCACAATGAACAAGCTTGCAGACGGTATTGTCTTCCATCTAATATTTGTTAGTATTGAGACATTTTCTCTAATAGTACTTACCTCCGTACATTTTCACAAATTGTAGTGCGACAAAGAGGACGAAAGAGGACCATGGTTGGATGA
Protein sequence

>MS.gene049465.t1

MQPRKFMWDKICMWQNRVFSTTIARSNEDGINFLPKMPQFNHTPAPYNGPSTSDLIKRRNQYLPTFVNTYYNHPLNLVEGKMQYVYDENGRRYLDAFGGIATVSCGHCHPDVVEAIVNQTKLLQHTTVLYLNHNVVDFGEALAAKMPGELKAVFFTNSGTEANELALMMARLYTGCHDIISIRNGYHGNASSTMSVTAQFYHKFNVVQTGVHHVLNPDPYRGVFGLDGAKYANDVQDIINHGTCGRVAGFVAEAIQGVGGVIELAPGYLPAVYNIIKKAGGLFIADEVQSGFGRTGSHFWGFEAHGIVPDIVTLAKGIGNGAPIGAVVTTPEIAKVLKYAYYFSTFGGNPVCASAGLAVLNVIEKDKLQQNAYVVGSYLKDRLNSLMEKHELIGDVRGRGMLLGVELVKDRKLKTPAKDENMQILEQMKDMGVLVGKGGFYGNVLRITPPLCFTKEDADFLVDVMDYTMSKMVKLKEFDIMGTETESTDTSLILIKQGAEARVFETSFVGRRCVVKERFSKKYRHPILDAKLTLKRLNAEARCTTKARRLGVCTPVLYAVDPVLHTLTFEFVDGPSVKDVFLEFGSCGINEERLGKIASQIGDVIAKLHDGGLVHGDLTTSNMLLKNDTDQLVLIDFGLSFTSTLPEDKAVDLYVLERALVSMHSSCGNVMDQILAAYRKSSKQWSSTMNKLADVRQRGRKRTMVG