Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050023.t1 | XP_024628740.1 | 44.7 | 228 | 62 | 4 | 126 | 298 | 29 | 247 | 8.70E-36 | 161 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050023.t1 | Q9LT81 | 34.5 | 110 | 68 | 1 | 185 | 294 | 271 | 376 | 5.4e-10 | 66.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050023.t1 | G7J1X0 | 48.3 | 180 | 63 | 3 | 153 | 304 | 64 | 241 | 1.0e-33 | 153.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene050023.t1 | TF | C3H |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050023.t1 | MTR_3g050390 | 48.333 | 180 | 63 | 3 | 153 | 304 | 64 | 241 | 1.40e-45 | 154 |
| MS.gene050023.t1 | MTR_4g113860 | 43.415 | 205 | 56 | 8 | 158 | 304 | 118 | 320 | 1.04e-31 | 120 |
| MS.gene050023.t1 | MTR_3g466460 | 53.000 | 100 | 40 | 2 | 206 | 299 | 4 | 102 | 2.52e-20 | 85.5 |
| MS.gene050023.t1 | MTR_4g113970 | 64.516 | 62 | 16 | 1 | 153 | 208 | 108 | 169 | 3.16e-19 | 85.5 |
| MS.gene050023.t1 | MTR_4g113980 | 58.228 | 79 | 33 | 0 | 213 | 291 | 12 | 90 | 7.94e-15 | 69.3 |
| MS.gene050023.t1 | MTR_4g113940 | 31.183 | 186 | 71 | 5 | 158 | 291 | 90 | 270 | 8.72e-15 | 73.2 |
| MS.gene050023.t1 | MTR_4g113890 | 36.025 | 161 | 42 | 4 | 165 | 290 | 96 | 230 | 2.23e-13 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050023.t1 | AT3G19360 | 34.746 | 118 | 63 | 3 | 182 | 294 | 268 | 376 | 4.71e-12 | 66.2 |
| MS.gene050023.t1 | AT3G19360 | 34.746 | 118 | 63 | 3 | 182 | 294 | 268 | 376 | 4.71e-12 | 66.2 |
Find 68 sgRNAs with CRISPR-Local
Find 268 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCACCATTGTAATACTTCT+TGG | 0.163111 | 5.4:-51346672 | None:intergenic |
| AAGAAGATCAACACTATTTA+TGG | 0.191666 | 5.4:+51349220 | MS.gene050023:CDS |
| TCCTCTGCACTTGGCAAGTT+TGG | 0.195123 | 5.4:-51349274 | None:intergenic |
| ATCAAGAATCAGAGAAAATT+TGG | 0.223827 | 5.4:-51346224 | None:intergenic |
| CTTGTGAAATCTTGGTTTCC+TGG | 0.246188 | 5.4:-51345549 | None:intergenic |
| GTTCCTGGTGGAGGCATTAA+AGG | 0.271871 | 5.4:+51349028 | MS.gene050023:CDS |
| CAAAAGGAGTTTGAGAAGTT+TGG | 0.274477 | 5.4:-51345579 | None:intergenic |
| TGAGGTTTCTTGACAATAAC+AGG | 0.298419 | 5.4:-51345790 | None:intergenic |
| AACAGATCTTGTTCCCATTA+GGG | 0.307940 | 5.4:+51345651 | MS.gene050023:CDS |
| TAACAGATCTTGTTCCCATT+AGG | 0.329042 | 5.4:+51345650 | MS.gene050023:CDS |
| GTATAAACTGGTAAGGCATT+TGG | 0.331475 | 5.4:-51349103 | None:intergenic |
| ATTCTTACCCTCTTGTTCAT+TGG | 0.332135 | 5.4:-51346384 | None:intergenic |
| CTCTTGTTCATTGGAAATTG+AGG | 0.372663 | 5.4:-51346375 | None:intergenic |
| CAACATTCATTGTATCCAAT+TGG | 0.383234 | 5.4:+51346180 | MS.gene050023:CDS |
| GTCAGATGCTTGTGAAATCT+TGG | 0.384268 | 5.4:-51345557 | None:intergenic |
| ATGGCTTGAAACAACCCTAA+TGG | 0.387771 | 5.4:-51345665 | None:intergenic |
| ATGTTATCGTTGCGGTTGTT+TGG | 0.394109 | 5.4:-51346342 | None:intergenic |
| ATAAGGCAGCCACCGTGAAT+TGG | 0.397681 | 5.4:+51346561 | MS.gene050023:intron |
| TGGCTTGAAACAACCCTAAT+GGG | 0.399086 | 5.4:-51345664 | None:intergenic |
| GGTAAGGCATTTGGTAAAGT+TGG | 0.401328 | 5.4:-51349094 | None:intergenic |
| GGTGCATCATTTGTATAAAC+TGG | 0.403031 | 5.4:-51349115 | None:intergenic |
| AGTTACAACTTACAAGTTCC+TGG | 0.407166 | 5.4:+51349013 | MS.gene050023:CDS |
| TTCATTACATGAGAAGGCTT+TGG | 0.418477 | 5.4:-51345707 | None:intergenic |
| CTCAATTTCCAATGAACAAG+AGG | 0.448816 | 5.4:+51346376 | MS.gene050023:CDS |
| ATCCCTTAGTGACATCCAAT+TGG | 0.456386 | 5.4:-51346195 | None:intergenic |
| AATGGTGAGGAATGTCCTTA+TGG | 0.456697 | 5.4:+51346686 | MS.gene050023:CDS |
| TTTAATATCCACCAAAGTAA+TGG | 0.458861 | 5.4:-51349196 | None:intergenic |
| TCTTGTTCATTGGAAATTGA+GGG | 0.459679 | 5.4:-51346374 | None:intergenic |
| TATCCAATTGGATGTCACTA+AGG | 0.462579 | 5.4:+51346192 | MS.gene050023:CDS |
| TCAACACTATTTATGGCGAT+TGG | 0.466072 | 5.4:+51349227 | MS.gene050023:CDS |
| AAACTACACTTGTCACCATA+AGG | 0.480255 | 5.4:-51346701 | None:intergenic |
| TCTAGCTATGGCAAAGGAAG+AGG | 0.489076 | 5.4:+51349156 | MS.gene050023:CDS |
| CTAAGAAGCAGCCATTACTT+TGG | 0.492038 | 5.4:+51349185 | MS.gene050023:CDS |
| AACTAGCTCCTTCCAATTCA+CGG | 0.494125 | 5.4:-51346573 | None:intergenic |
| AGAAGCAGCCATTACTTTGG+TGG | 0.501596 | 5.4:+51349188 | MS.gene050023:CDS |
| ACTCAGGTCTCCTCTGCACT+TGG | 0.516894 | 5.4:-51349283 | None:intergenic |
| GCCATGTTCCCACCAAGAAA+AGG | 0.519256 | 5.4:+51345683 | MS.gene050023:CDS |
| AACTTACAAGTTCCTGGTGG+AGG | 0.533441 | 5.4:+51349019 | MS.gene050023:CDS |
| ATCATTTGTATAAACTGGTA+AGG | 0.538189 | 5.4:-51349110 | None:intergenic |
| TAGACTTGCTAGGATGTTGG+CGG | 0.538885 | 5.4:-51349137 | None:intergenic |
| AGAGAGTTCATTACATGAGA+AGG | 0.541237 | 5.4:-51345713 | None:intergenic |
| TCAGAGAATCATTCACAAGA+TGG | 0.544439 | 5.4:+51346643 | MS.gene050023:CDS |
| TTGCCATAGCTAGACTTGCT+AGG | 0.545176 | 5.4:-51349147 | None:intergenic |
| TATGGCAAAGGAAGAGGAGA+AGG | 0.552115 | 5.4:+51349162 | MS.gene050023:CDS |
| GGCAAGTTTGGAAGAACAAG+AGG | 0.556271 | 5.4:-51349262 | None:intergenic |
| ATCCAATTGGATGTCACTAA+GGG | 0.556644 | 5.4:+51346193 | MS.gene050023:CDS |
| AGCAAAAGACGGATCATCAA+AGG | 0.563192 | 5.4:+51345624 | MS.gene050023:CDS |
| TCCAAACTTGCCAAGTGCAG+AGG | 0.568928 | 5.4:+51349273 | MS.gene050023:CDS |
| CAACGAGGAACGACTACAGT+TGG | 0.570638 | 5.4:+51346604 | MS.gene050023:CDS |
| AGCTAGACTTGCTAGGATGT+TGG | 0.571351 | 5.4:-51349140 | None:intergenic |
| TCACTTCAATGTTATCGTTG+CGG | 0.571554 | 5.4:-51346350 | None:intergenic |
| CATCCTAGCAAGTCTAGCTA+TGG | 0.572070 | 5.4:+51349144 | MS.gene050023:CDS |
| TGTAGTCGTTCCTCGTTGCG+AGG | 0.572404 | 5.4:-51346599 | None:intergenic |
| TACAGACTGGTCATAAAATG+AGG | 0.576401 | 5.4:-51345808 | None:intergenic |
| GGTGTAGGAAGCGACACAAA+AGG | 0.579241 | 5.4:-51345595 | None:intergenic |
| TCACCTTTAATGCCTCCACC+AGG | 0.591568 | 5.4:-51349031 | None:intergenic |
| GGCAGCCACCGTGAATTGGA+AGG | 0.607378 | 5.4:+51346565 | MS.gene050023:intron |
| AGACTTGCTAGGATGTTGGC+GGG | 0.611236 | 5.4:-51349136 | None:intergenic |
| GGTGGAGGCATTAAAGGTGA+AGG | 0.619947 | 5.4:+51349034 | MS.gene050023:CDS |
| TCAATTTCCAATGAACAAGA+GGG | 0.637810 | 5.4:+51346377 | MS.gene050023:CDS |
| GAATCAGAGAAAATTTGGAA+CGG | 0.638563 | 5.4:-51346219 | None:intergenic |
| AGCAAGTCTAGCTATGGCAA+AGG | 0.643344 | 5.4:+51349150 | MS.gene050023:CDS |
| CAAGAAGTATTACAATGGTG+AGG | 0.644651 | 5.4:+51346673 | MS.gene050023:CDS |
| CTCTCCAAGAAGTATTACAA+TGG | 0.653740 | 5.4:+51346668 | MS.gene050023:CDS |
| ACACCATCCAAAGCAAAAGA+CGG | 0.654937 | 5.4:+51345613 | MS.gene050023:CDS |
| TACAACTTACAAGTTCCTGG+TGG | 0.700883 | 5.4:+51349016 | MS.gene050023:CDS |
| GCTAGTTAGTCCTCGCAACG+AGG | 0.721526 | 5.4:+51346589 | MS.gene050023:CDS |
| TAGCTCCTTCCAATTCACGG+TGG | 0.783407 | 5.4:-51346570 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATATATATATATAT+AGG | + | chr5.4:51348457-51348476 | MS.gene050023:intron | 0.0% |
| !! | TATATATATATATATATATA+TGG | - | chr5.4:51348477-51348458 | None:intergenic | 0.0% |
| !! | ATACAAAATATTAAAAACAT+CGG | - | chr5.4:51347226-51347245 | None:intergenic | 10.0% |
| !! | ATATATATATATACATATAG+GGG | - | chr5.4:51348808-51348827 | None:intergenic | 10.0% |
| !! | TAGATTAAATTTGAATTAAA+AGG | - | chr5.4:51348376-51348395 | None:intergenic | 10.0% |
| !! | TTAATTCAAATTTAATCTAA+TGG | + | chr5.4:51348377-51348396 | MS.gene050023:intron | 10.0% |
| !! | AATAAAAAAAAAACATACCA+AGG | - | chr5.4:51346129-51346148 | None:intergenic | 15.0% |
| !! | TAAATTTGAATTAAAAGGTA+TGG | - | chr5.4:51348371-51348390 | None:intergenic | 15.0% |
| !! | TTGTATTAAATAGGATATTA+TGG | + | chr5.4:51347240-51347259 | MS.gene050023:intron | 15.0% |
| !! | ACAAGTTATAACTAAAAAGT+AGG | - | chr5.4:51348593-51348612 | None:intergenic | 20.0% |
| !! | ATGTAGTTGATCATATTAAA+TGG | + | chr5.4:51346800-51346819 | MS.gene050023:intron | 20.0% |
| !! | ATTTGTCTTAAGTTTAGATT+TGG | + | chr5.4:51346489-51346508 | MS.gene050023:intron | 20.0% |
| !! | CAAAAATAAAAAGAAGAAAC+AGG | - | chr5.4:51347355-51347374 | None:intergenic | 20.0% |
| !! | TTAATATGATCAACTACATT+AGG | - | chr5.4:51346799-51346818 | None:intergenic | 20.0% |
| !!! | AAAGTCATGATTTTTAATGA+AGG | - | chr5.4:51348121-51348140 | None:intergenic | 20.0% |
| !!! | AAGTCATGATTTTTAATGAA+GGG | - | chr5.4:51348120-51348139 | None:intergenic | 20.0% |
| !!! | AATGTCTTTGATTGATTTTA+AGG | - | chr5.4:51347875-51347894 | None:intergenic | 20.0% |
| !!! | AATTTTTGCTTCTAATTTAG+AGG | + | chr5.4:51347479-51347498 | MS.gene050023:intron | 20.0% |
| !!! | ACCTTCTAAAAAAAATAAGT+GGG | - | chr5.4:51348684-51348703 | None:intergenic | 20.0% |
| !!! | AGAGAAATGCAAAATTTTAA+TGG | - | chr5.4:51346049-51346068 | None:intergenic | 20.0% |
| !!! | ATGCAAAATTTTAATGGTAA+TGG | - | chr5.4:51346043-51346062 | None:intergenic | 20.0% |
| !!! | ATTTTTTGCTATTTAACAAG+AGG | + | chr5.4:51347282-51347301 | MS.gene050023:intron | 20.0% |
| !!! | TGCAAAATTTTAATGGTAAT+GGG | - | chr5.4:51346042-51346061 | None:intergenic | 20.0% |
| !!! | TTTTTTGCTATTTAACAAGA+GGG | + | chr5.4:51347283-51347302 | MS.gene050023:intron | 20.0% |
| ! | AAGAAGATCAACACTATTTA+TGG | + | chr5.4:51349220-51349239 | MS.gene050023:CDS | 25.0% |
| ! | AAGTTGTTAAATACACCTTA+AGG | - | chr5.4:51348725-51348744 | None:intergenic | 25.0% |
| ! | ACAAAAAAACGGAAGATAAA+AGG | + | chr5.4:51348260-51348279 | MS.gene050023:intron | 25.0% |
| ! | ACCAAGAAATTGAAATTAGA+AGG | - | chr5.4:51345921-51345940 | None:intergenic | 25.0% |
| ! | ATAAAAAGAAGAAACAGGAT+TGG | - | chr5.4:51347350-51347369 | None:intergenic | 25.0% |
| ! | ATAGTCGTAACTACTAATAA+AGG | - | chr5.4:51346321-51346340 | None:intergenic | 25.0% |
| ! | ATCAAGAATCAGAGAAAATT+TGG | - | chr5.4:51346227-51346246 | None:intergenic | 25.0% |
| ! | ATCATTTGTATAAACTGGTA+AGG | - | chr5.4:51349113-51349132 | None:intergenic | 25.0% |
| ! | GCATTTGTAGTTTATACAAA+TGG | + | chr5.4:51346079-51346098 | MS.gene050023:intron | 25.0% |
| ! | TCCTTCTAATTTCAATTTCT+TGG | + | chr5.4:51345917-51345936 | MS.gene050023:intron | 25.0% |
| ! | TCTGAAAAAATAAAGCTTTG+TGG | - | chr5.4:51347946-51347965 | None:intergenic | 25.0% |
| ! | TTATAACAATCGAAACAGTT+TGG | + | chr5.4:51348938-51348957 | MS.gene050023:intron | 25.0% |
| ! | TTTAATATCCACCAAAGTAA+TGG | - | chr5.4:51349199-51349218 | None:intergenic | 25.0% |
| !! | AATTTTGTAACTATGCTCTT+GGG | + | chr5.4:51346529-51346548 | MS.gene050023:intron | 25.0% |
| !! | AGCTTTTGTTGAATTTTCTA+TGG | - | chr5.4:51349068-51349087 | None:intergenic | 25.0% |
| !! | ATGTTAAGAATTTTTGCTGA+TGG | + | chr5.4:51347513-51347532 | MS.gene050023:intron | 25.0% |
| !! | CACCTTCTAAAAAAAATAAG+TGG | - | chr5.4:51348685-51348704 | None:intergenic | 25.0% |
| !! | CTGAAAAAATAAAGCTTTGT+GGG | - | chr5.4:51347945-51347964 | None:intergenic | 25.0% |
| !! | TTTTAACAACATTCACCTTA+AGG | + | chr5.4:51348707-51348726 | MS.gene050023:intron | 25.0% |
| !!! | ACACCTTCTAAAATATAAGT+GGG | + | chr5.4:51348619-51348638 | MS.gene050023:intron | 25.0% |
| !!! | ACCCACTTATTTTTTTTAGA+AGG | + | chr5.4:51348680-51348699 | MS.gene050023:intron | 25.0% |
| !!! | ATTTTTTCAGATCCATGTAT+TGG | + | chr5.4:51347955-51347974 | MS.gene050023:intron | 25.0% |
| !!! | CTTCTTTTTATTTTTGCTGA+TGG | + | chr5.4:51347359-51347378 | MS.gene050023:intron | 25.0% |
| !!! | TCTTTGATTGATTTTAAGGT+AGG | - | chr5.4:51347871-51347890 | None:intergenic | 25.0% |
| !!! | TGATAATGGAAATCTTTGTT+TGG | - | chr5.4:51348195-51348214 | None:intergenic | 25.0% |
| AATTTCTTGGTATGCAAATG+GGG | + | chr5.4:51345930-51345949 | MS.gene050023:intron | 30.0% | |
| ACCTACTAGAAAAACTGAAA+AGG | + | chr5.4:51345759-51345778 | MS.gene050023:CDS | 30.0% | |
| AGAAGAAAAAGTAGAAGAGA+AGG | + | chr5.4:51348300-51348319 | MS.gene050023:intron | 30.0% | |
| ATACATAAAACCAACGATTG+TGG | - | chr5.4:51347599-51347618 | None:intergenic | 30.0% | |
| ATATGATCAACTACATTAGG+AGG | - | chr5.4:51346796-51346815 | None:intergenic | 30.0% | |
| ATCAAAGACATTCCATGTAT+TGG | + | chr5.4:51347883-51347902 | MS.gene050023:intron | 30.0% | |
| CAACATTCATTGTATCCAAT+TGG | + | chr5.4:51346180-51346199 | MS.gene050023:CDS | 30.0% | |
| CAATTTCTTGGTATGCAAAT+GGG | + | chr5.4:51345929-51345948 | MS.gene050023:intron | 30.0% | |
| GAATCAGAGAAAATTTGGAA+CGG | - | chr5.4:51346222-51346241 | None:intergenic | 30.0% | |
| TATCCAAAATGAACCCTAAT+GGG | - | chr5.4:51345864-51345883 | None:intergenic | 30.0% | |
| TATGATCAACTACATTAGGA+GGG | - | chr5.4:51346795-51346814 | None:intergenic | 30.0% | |
| TCAATTTCCAATGAACAAGA+GGG | + | chr5.4:51346377-51346396 | MS.gene050023:CDS | 30.0% | |
| TCAATTTCTTGGTATGCAAA+TGG | + | chr5.4:51345928-51345947 | MS.gene050023:intron | 30.0% | |
| TCTCCATCAAACAAAGAAAT+AGG | + | chr5.4:51346444-51346463 | MS.gene050023:intron | 30.0% | |
| TCTTAGCTTAATTGCTTGTT+TGG | - | chr5.4:51348088-51348107 | None:intergenic | 30.0% | |
| TCTTGTTCATTGGAAATTGA+GGG | - | chr5.4:51346377-51346396 | None:intergenic | 30.0% | |
| TGAGAATAAATCTCAACCAT+TGG | + | chr5.4:51347674-51347693 | MS.gene050023:intron | 30.0% | |
| TGTCTGACTCATTAAGAATT+TGG | + | chr5.4:51347395-51347414 | MS.gene050023:intron | 30.0% | |
| TTATCCAAAATGAACCCTAA+TGG | - | chr5.4:51345865-51345884 | None:intergenic | 30.0% | |
| TTTGCTGATGGTTTCTAATT+TGG | + | chr5.4:51347525-51347544 | MS.gene050023:intron | 30.0% | |
| ! | ACAAGTGTAGTTTTCTTCAT+AGG | + | chr5.4:51346711-51346730 | MS.gene050023:CDS | 30.0% |
| ! | AGATTTGGTAATTGTTCGAA+AGG | + | chr5.4:51346504-51346523 | MS.gene050023:intron | 30.0% |
| ! | ATGCCTATTTCTTTGTTTGA+TGG | - | chr5.4:51346450-51346469 | None:intergenic | 30.0% |
| ! | ATTTCTTTGTTTGATGGAGA+AGG | - | chr5.4:51346444-51346463 | None:intergenic | 30.0% |
| ! | ATTTTGTAACTATGCTCTTG+GGG | + | chr5.4:51346530-51346549 | MS.gene050023:intron | 30.0% |
| ! | CAAGTGTAGTTTTCTTCATA+GGG | + | chr5.4:51346712-51346731 | MS.gene050023:CDS | 30.0% |
| ! | CAATTTTGTAACTATGCTCT+TGG | + | chr5.4:51346528-51346547 | MS.gene050023:intron | 30.0% |
| ! | TATACATATAGGGGTTTGTT+AGG | - | chr5.4:51348799-51348818 | None:intergenic | 30.0% |
| ! | TGCATTGGAATGATTGTTTT+CGG | - | chr5.4:51346412-51346431 | None:intergenic | 30.0% |
| ! | TTATGGATTAACATACAGAC+TGG | - | chr5.4:51345824-51345843 | None:intergenic | 30.0% |
| ! | TTTCTTTGTTTGATGGAGAA+GGG | - | chr5.4:51346443-51346462 | None:intergenic | 30.0% |
| ! | TTTTATCAAGCTACACCTTA+AGG | + | chr5.4:51348559-51348578 | MS.gene050023:intron | 30.0% |
| !! | ACACCCACTTATATTTTAGA+AGG | - | chr5.4:51348625-51348644 | None:intergenic | 30.0% |
| !! | CACACCTTCTAAAATATAAG+TGG | + | chr5.4:51348618-51348637 | MS.gene050023:intron | 30.0% |
| !! | GGTTAGAATTTTGATGTCAA+AGG | - | chr5.4:51347569-51347588 | None:intergenic | 30.0% |
| !! | TAATGTCTATTTGGGGTTTT+TGG | - | chr5.4:51348014-51348033 | None:intergenic | 30.0% |
| !!! | TTGATTGATTTTAAGGTAGG+TGG | - | chr5.4:51347868-51347887 | None:intergenic | 30.0% |
| AAAAGTCACGTGAGAGTTTA+TGG | - | chr5.4:51348326-51348345 | None:intergenic | 35.0% | |
| AAACTACACTTGTCACCATA+AGG | - | chr5.4:51346704-51346723 | None:intergenic | 35.0% | |
| AAATCTCAACCATTGGATCA+AGG | + | chr5.4:51347681-51347700 | MS.gene050023:intron | 35.0% | |
| AACAGATCTTGTTCCCATTA+GGG | + | chr5.4:51345651-51345670 | MS.gene050023:CDS | 35.0% | |
| AACCCCAAATAGACATTACT+TGG | + | chr5.4:51348016-51348035 | MS.gene050023:intron | 35.0% | |
| AAGAGTCAGAAGAAGATAGA+TGG | - | chr5.4:51348967-51348986 | None:intergenic | 35.0% | |
| AAGTAGGTAAATGCACCTTA+AGG | - | chr5.4:51348577-51348596 | None:intergenic | 35.0% | |
| AATAAGTGGGTGTATGTTAG+CGG | - | chr5.4:51348671-51348690 | None:intergenic | 35.0% | |
| ACACCCAAGTAATGTCTATT+TGG | - | chr5.4:51348023-51348042 | None:intergenic | 35.0% | |
| ACCCAAGTAATGTCTATTTG+GGG | - | chr5.4:51348021-51348040 | None:intergenic | 35.0% | |
| ACCCCAAATAGACATTACTT+GGG | + | chr5.4:51348017-51348036 | MS.gene050023:intron | 35.0% | |
| ACTCCCACATAAAAACTAGT+GGG | + | chr5.4:51348768-51348787 | MS.gene050023:intron | 35.0% | |
| ACTCCCACATAAAAACTAGT+GGG | - | chr5.4:51348787-51348768 | None:intergenic | 35.0% | |
| AGAGAGTTCATTACATGAGA+AGG | - | chr5.4:51345716-51345735 | None:intergenic | 35.0% | |
| AGGTGCAGTTCACAAAAAAA+CGG | + | chr5.4:51348249-51348268 | MS.gene050023:intron | 35.0% | |
| AGTTACAACTTACAAGTTCC+TGG | + | chr5.4:51349013-51349032 | MS.gene050023:CDS | 35.0% | |
| ATAAAAGCCATTGTAGCCTA+TGG | - | chr5.4:51347012-51347031 | None:intergenic | 35.0% | |
| ATCCAATTGGATGTCACTAA+GGG | + | chr5.4:51346193-51346212 | MS.gene050023:CDS | 35.0% | |
| ATGATCAACTACATTAGGAG+GGG | - | chr5.4:51346794-51346813 | None:intergenic | 35.0% | |
| ATTCTTACCCTCTTGTTCAT+TGG | - | chr5.4:51346387-51346406 | None:intergenic | 35.0% | |
| CAAAAGGAGTTTGAGAAGTT+TGG | - | chr5.4:51345582-51345601 | None:intergenic | 35.0% | |
| CACCCAAGTAATGTCTATTT+GGG | - | chr5.4:51348022-51348041 | None:intergenic | 35.0% | |
| CTCAATTTCCAATGAACAAG+AGG | + | chr5.4:51346376-51346395 | MS.gene050023:CDS | 35.0% | |
| CTCACCATTGTAATACTTCT+TGG | - | chr5.4:51346675-51346694 | None:intergenic | 35.0% | |
| CTCTTGTTCATTGGAAATTG+AGG | - | chr5.4:51346378-51346397 | None:intergenic | 35.0% | |
| CTGACTCATTAAGAATTTGG+AGG | + | chr5.4:51347398-51347417 | MS.gene050023:intron | 35.0% | |
| GGTGCATCATTTGTATAAAC+TGG | - | chr5.4:51349118-51349137 | None:intergenic | 35.0% | |
| GTATTCTAGCAAATGCACAT+AGG | + | chr5.4:51348643-51348662 | MS.gene050023:intron | 35.0% | |
| GTCGTAACTACTAATAAAGG+AGG | - | chr5.4:51346318-51346337 | None:intergenic | 35.0% | |
| TAACAGATCTTGTTCCCATT+AGG | + | chr5.4:51345650-51345669 | MS.gene050023:CDS | 35.0% | |
| TAGAGCAGTGTTATCATAAG+TGG | - | chr5.4:51347112-51347131 | None:intergenic | 35.0% | |
| TATCCAATTGGATGTCACTA+AGG | + | chr5.4:51346192-51346211 | MS.gene050023:CDS | 35.0% | |
| TCAACACTATTTATGGCGAT+TGG | + | chr5.4:51349227-51349246 | MS.gene050023:CDS | 35.0% | |
| TCACTTCAATGTTATCGTTG+CGG | - | chr5.4:51346353-51346372 | None:intergenic | 35.0% | |
| TCAGAGAATCATTCACAAGA+TGG | + | chr5.4:51346643-51346662 | MS.gene050023:CDS | 35.0% | |
| TGAGGTTTCTTGACAATAAC+AGG | - | chr5.4:51345793-51345812 | None:intergenic | 35.0% | |
| TGTTAATCCATAAGTCTGCA+AGG | + | chr5.4:51345831-51345850 | MS.gene050023:intron | 35.0% | |
| TTCATTACATGAGAAGGCTT+TGG | - | chr5.4:51345710-51345729 | None:intergenic | 35.0% | |
| TTGATGTCAAAGGACAAACA+GGG | - | chr5.4:51347559-51347578 | None:intergenic | 35.0% | |
| TTTGATGTCAAAGGACAAAC+AGG | - | chr5.4:51347560-51347579 | None:intergenic | 35.0% | |
| TTTGTTTGGTTGAGACTTTG+GGG | - | chr5.4:51348181-51348200 | None:intergenic | 35.0% | |
| ! | ATCCATGTATTGGTGAGAAA+GGG | + | chr5.4:51347965-51347984 | MS.gene050023:intron | 35.0% |
| ! | ATTACTTGGGTGTGTTGTTA+TGG | + | chr5.4:51348030-51348049 | MS.gene050023:intron | 35.0% |
| ! | ATTCCATGTATTGGTGAGAA+AGG | + | chr5.4:51347892-51347911 | MS.gene050023:intron | 35.0% |
| ! | CTTTGTTTGGTTGAGACTTT+GGG | - | chr5.4:51348182-51348201 | None:intergenic | 35.0% |
| ! | GTATAAACTGGTAAGGCATT+TGG | - | chr5.4:51349106-51349125 | None:intergenic | 35.0% |
| ! | GTTGTTATGGTCTGAAGTTT+AGG | + | chr5.4:51348043-51348062 | MS.gene050023:intron | 35.0% |
| ! | TACAGACTGGTCATAAAATG+AGG | - | chr5.4:51345811-51345830 | None:intergenic | 35.0% |
| ! | TCTTTGTTTGGTTGAGACTT+TGG | - | chr5.4:51348183-51348202 | None:intergenic | 35.0% |
| ! | TTCCATGTATTGGTGAGAAA+GGG | + | chr5.4:51347893-51347912 | MS.gene050023:intron | 35.0% |
| ! | TTCTCTGTCTGAATCGTTTT+GGG | + | chr5.4:51347793-51347812 | MS.gene050023:intron | 35.0% |
| !! | CAAGAAGTATTACAATGGTG+AGG | + | chr5.4:51346673-51346692 | MS.gene050023:CDS | 35.0% |
| !! | CTCTCCAAGAAGTATTACAA+TGG | + | chr5.4:51346668-51346687 | MS.gene050023:CDS | 35.0% |
| !! | GCCTTTTCAGTTTTTCTAGT+AGG | - | chr5.4:51345763-51345782 | None:intergenic | 35.0% |
| !! | GGGTTTTGTGATGATGATAA+TGG | - | chr5.4:51348209-51348228 | None:intergenic | 35.0% |
| !!! | ACACCCACTAGTTTTTATGT+GGG | + | chr5.4:51348532-51348551 | MS.gene050023:intron | 35.0% |
| !!! | ACACCCACTAGTTTTTATGT+GGG | - | chr5.4:51348551-51348532 | None:intergenic | 35.0% |
| !!! | ATTTTAAGGTAGGTGGAGAA+GGG | - | chr5.4:51347861-51347880 | None:intergenic | 35.0% |
| !!! | TACACCCACTAGTTTTTATG+TGG | - | chr5.4:51348775-51348794 | None:intergenic | 35.0% |
| !!! | TGAGTTGCTTTTTACAACCT+TGG | + | chr5.4:51346109-51346128 | MS.gene050023:intron | 35.0% |
| AACCAACTTTGCCTATAAGC+AGG | - | chr5.4:51346840-51346859 | None:intergenic | 40.0% | |
| AACCATTGGATCAAGGTCTA+TGG | + | chr5.4:51347688-51347707 | MS.gene050023:intron | 40.0% | |
| AACCCTTTCTCACCAATACA+TGG | - | chr5.4:51347898-51347917 | None:intergenic | 40.0% | |
| AACTAGCTCCTTCCAATTCA+CGG | - | chr5.4:51346576-51346595 | None:intergenic | 40.0% | |
| AATAATCCGGCATACAAGCA+TGG | - | chr5.4:51347066-51347085 | None:intergenic | 40.0% | |
| AATGGTGAGGAATGTCCTTA+TGG | + | chr5.4:51346686-51346705 | MS.gene050023:CDS | 40.0% | |
| ACAATTTCACCCCTGCTTAT+AGG | + | chr5.4:51346826-51346845 | MS.gene050023:intron | 40.0% | |
| ACACCATCCAAAGCAAAAGA+CGG | + | chr5.4:51345613-51345632 | MS.gene050023:CDS | 40.0% | |
| ACCAACGATTGTGGCTAAAA+CGG | - | chr5.4:51347590-51347609 | None:intergenic | 40.0% | |
| ACCAACTTTGCCTATAAGCA+GGG | - | chr5.4:51346839-51346858 | None:intergenic | 40.0% | |
| AGCAAAAGACGGATCATCAA+AGG | + | chr5.4:51345624-51345643 | MS.gene050023:CDS | 40.0% | |
| ATCATCATCACAAAACCCTC+AGG | + | chr5.4:51348211-51348230 | MS.gene050023:intron | 40.0% | |
| ATCCCTTAGTGACATCCAAT+TGG | - | chr5.4:51346198-51346217 | None:intergenic | 40.0% | |
| ATGCTTGTATGCCGGATTAT+TGG | + | chr5.4:51347065-51347084 | MS.gene050023:intron | 40.0% | |
| ATGGCTTGAAACAACCCTAA+TGG | - | chr5.4:51345668-51345687 | None:intergenic | 40.0% | |
| ATGTTATCGTTGCGGTTGTT+TGG | - | chr5.4:51346345-51346364 | None:intergenic | 40.0% | |
| ATTTGCACACCCTTACTTCA+AGG | + | chr5.4:51345888-51345907 | MS.gene050023:intron | 40.0% | |
| CACTCCCACATAAAAACTAG+TGG | + | chr5.4:51348767-51348786 | MS.gene050023:intron | 40.0% | |
| CACTCCCACATAAAAACTAG+TGG | - | chr5.4:51348786-51348767 | None:intergenic | 40.0% | |
| CTAAGAAGCAGCCATTACTT+TGG | + | chr5.4:51349185-51349204 | MS.gene050023:CDS | 40.0% | |
| CTTGTGAAATCTTGGTTTCC+TGG | - | chr5.4:51345552-51345571 | None:intergenic | 40.0% | |
| GAGGTACATTTCTCATTGCA+AGG | + | chr5.4:51347417-51347436 | MS.gene050023:intron | 40.0% | |
| GCAGTGTTATCATAAGTGGA+AGG | - | chr5.4:51347108-51347127 | None:intergenic | 40.0% | |
| GTCAGATGCTTGTGAAATCT+TGG | - | chr5.4:51345560-51345579 | None:intergenic | 40.0% | |
| TACAACTTACAAGTTCCTGG+TGG | + | chr5.4:51349016-51349035 | MS.gene050023:CDS | 40.0% | |
| TCAGGGTAGAAGAAGATAGA+AGG | + | chr5.4:51348229-51348248 | MS.gene050023:intron | 40.0% | |
| TCATCATCACAAAACCCTCA+GGG | + | chr5.4:51348212-51348231 | MS.gene050023:intron | 40.0% | |
| TCTATCTTCTTCTACCCTGA+GGG | - | chr5.4:51348229-51348248 | None:intergenic | 40.0% | |
| TGGCTTGAAACAACCCTAAT+GGG | - | chr5.4:51345667-51345686 | None:intergenic | 40.0% | |
| TGTTATCATAAGTGGAAGGC+AGG | - | chr5.4:51347104-51347123 | None:intergenic | 40.0% | |
| TTCTATCTTCTTCTACCCTG+AGG | - | chr5.4:51348230-51348249 | None:intergenic | 40.0% | |
| ! | ATTTATGATGACGAAGACCC+TGG | - | chr5.4:51345975-51345994 | None:intergenic | 40.0% |
| ! | CATCCCATTAGGGTTCATTT+TGG | + | chr5.4:51345858-51345877 | MS.gene050023:intron | 40.0% |
| ! | CTTCCTCTTTTATGATGCCA+GGG | + | chr5.4:51345955-51345974 | MS.gene050023:intron | 40.0% |
| ! | CTTCTCTGTCTGAATCGTTT+TGG | + | chr5.4:51347792-51347811 | MS.gene050023:intron | 40.0% |
| ! | GATCCATGTATTGGTGAGAA+AGG | + | chr5.4:51347964-51347983 | MS.gene050023:intron | 40.0% |
| ! | GATGTTGGATTGTTGGTTGT+GGG | - | chr5.4:51347829-51347848 | None:intergenic | 40.0% |
| ! | GGTAAGGCATTTGGTAAAGT+TGG | - | chr5.4:51349097-51349116 | None:intergenic | 40.0% |
| ! | GTAGTTTTCTTCATAGGGTG+TGG | + | chr5.4:51346717-51346736 | MS.gene050023:intron | 40.0% |
| ! | TCTCTGTCTGAATCGTTTTG+GGG | + | chr5.4:51347794-51347813 | MS.gene050023:intron | 40.0% |
| ! | TCTTCCTCTTTTATGATGCC+AGG | + | chr5.4:51345954-51345973 | MS.gene050023:intron | 40.0% |
| ! | TGAAGTAAGGGTGTGCAAAT+GGG | - | chr5.4:51345888-51345907 | None:intergenic | 40.0% |
| ! | TGATGATCCGTCTTTTGCTT+TGG | - | chr5.4:51345623-51345642 | None:intergenic | 40.0% |
| ! | TGATGTTGGATTGTTGGTTG+TGG | - | chr5.4:51347830-51347849 | None:intergenic | 40.0% |
| ! | TTGAAGTAAGGGTGTGCAAA+TGG | - | chr5.4:51345889-51345908 | None:intergenic | 40.0% |
| !! | GTTGGTTCTGAATGCTGATT+TGG | + | chr5.4:51346853-51346872 | MS.gene050023:intron | 40.0% |
| !! | TCTTTTGCTTTGGATGGTGT+AGG | - | chr5.4:51345613-51345632 | None:intergenic | 40.0% |
| !!! | CACACCCACTAGTTTTTATG+TGG | + | chr5.4:51348531-51348550 | MS.gene050023:intron | 40.0% |
| !!! | GATTTTAAGGTAGGTGGAGA+AGG | - | chr5.4:51347862-51347881 | None:intergenic | 40.0% |
| !!! | TTTTAAGGTAGGTGGAGAAG+GGG | - | chr5.4:51347860-51347879 | None:intergenic | 40.0% |
| AACTTACAAGTTCCTGGTGG+AGG | + | chr5.4:51349019-51349038 | MS.gene050023:CDS | 45.0% | |
| ACAACTCCATGCTTGTATGC+CGG | + | chr5.4:51347057-51347076 | MS.gene050023:intron | 45.0% | |
| ACGATTCAGACAGAGAAGAG+AGG | - | chr5.4:51347790-51347809 | None:intergenic | 45.0% | |
| AGAAGCAGCCATTACTTTGG+TGG | + | chr5.4:51349188-51349207 | MS.gene050023:CDS | 45.0% | |
| AGACCCTGGCATCATAAAAG+AGG | - | chr5.4:51345961-51345980 | None:intergenic | 45.0% | |
| AGCAAGTCTAGCTATGGCAA+AGG | + | chr5.4:51349150-51349169 | MS.gene050023:CDS | 45.0% | |
| AGCCATAGACCTTGATCCAA+TGG | - | chr5.4:51347693-51347712 | None:intergenic | 45.0% | |
| AGGATGCGTACCTTGAAGTA+AGG | - | chr5.4:51345901-51345920 | None:intergenic | 45.0% | |
| ATGCGTACCTTGCAGACTTA+TGG | - | chr5.4:51345841-51345860 | None:intergenic | 45.0% | |
| CATAAGTGGAAGGCAGGTTA+CGG | - | chr5.4:51347098-51347117 | None:intergenic | 45.0% | |
| CATCCTAGCAAGTCTAGCTA+TGG | + | chr5.4:51349144-51349163 | MS.gene050023:CDS | 45.0% | |
| CCAACTTTGCCTATAAGCAG+GGG | - | chr5.4:51346838-51346857 | None:intergenic | 45.0% | |
| GATATAGAACTGTTGCGCAG+CGG | - | chr5.4:51347195-51347214 | None:intergenic | 45.0% | |
| GGATGCGTACCTTGAAGTAA+GGG | - | chr5.4:51345900-51345919 | None:intergenic | 45.0% | |
| GGCAAGTTTGGAAGAACAAG+AGG | - | chr5.4:51349265-51349284 | None:intergenic | 45.0% | |
| TATGGCAAAGGAAGAGGAGA+AGG | + | chr5.4:51349162-51349181 | MS.gene050023:CDS | 45.0% | |
| TCTAGCTATGGCAAAGGAAG+AGG | + | chr5.4:51349156-51349175 | MS.gene050023:CDS | 45.0% | |
| TTCAGACAGAGAAGAGAGGA+AGG | - | chr5.4:51347786-51347805 | None:intergenic | 45.0% | |
| TTGTAACTATGCTCTTGGGG+TGG | + | chr5.4:51346533-51346552 | MS.gene050023:intron | 45.0% | |
| ! | AGAAGGGCGTATGAATGCAT+TGG | - | chr5.4:51346427-51346446 | None:intergenic | 45.0% |
| ! | ATCCAGTGTGTTTCTGCCAT+AGG | + | chr5.4:51347032-51347051 | MS.gene050023:intron | 45.0% |
| ! | GCTTTGGTCCTTTTCTTGGT+GGG | - | chr5.4:51345694-51345713 | None:intergenic | 45.0% |
| ! | TCCTTTTCTTGGTGGGAACA+TGG | - | chr5.4:51345687-51345706 | None:intergenic | 45.0% |
| ! | TTGCCATAGCTAGACTTGCT+AGG | - | chr5.4:51349150-51349169 | None:intergenic | 45.0% |
| !! | ACCGTTTTAGCCACAATCGT+TGG | + | chr5.4:51347586-51347605 | MS.gene050023:intron | 45.0% |
| !! | AGCTAGACTTGCTAGGATGT+TGG | - | chr5.4:51349143-51349162 | None:intergenic | 45.0% |
| !! | GAAGGCTTTGGTCCTTTTCT+TGG | - | chr5.4:51345698-51345717 | None:intergenic | 45.0% |
| !! | GATCCGTCTTTTGCTTTGGA+TGG | - | chr5.4:51345619-51345638 | None:intergenic | 45.0% |
| !! | TAGACTTGCTAGGATGTTGG+CGG | - | chr5.4:51349140-51349159 | None:intergenic | 45.0% |
| !! | ATATATATATATATACATAT+AGG | - | chr5.4:51348810-51348829 | None:intergenic | 5.0% |
| !! | TATATATATATATACATATA+GGG | - | chr5.4:51348809-51348828 | None:intergenic | 5.0% |
| !! | TATGTATATATATATATATA+TGG | + | chr5.4:51347612-51347631 | MS.gene050023:intron | 5.0% |
| !!! | TTTAATATTTTGTATTAAAT+AGG | + | chr5.4:51347231-51347250 | MS.gene050023:intron | 5.0% |
| AAGCATGGAGTTGTGGCCTA+TGG | - | chr5.4:51347051-51347070 | None:intergenic | 50.0% | |
| ACGGAGGGTAGCCAATAATC+CGG | - | chr5.4:51347079-51347098 | None:intergenic | 50.0% | |
| ATAAGGCAGCCACCGTGAAT+TGG | + | chr5.4:51346561-51346580 | MS.gene050023:intron | 50.0% | |
| CAACGAGGAACGACTACAGT+TGG | + | chr5.4:51346604-51346623 | MS.gene050023:CDS | 50.0% | |
| CCCCTGCTTATAGGCAAAGT+TGG | + | chr5.4:51346835-51346854 | MS.gene050023:intron | 50.0% | |
| CTCTTGGGGTGGATGAGATA+AGG | + | chr5.4:51346544-51346563 | MS.gene050023:intron | 50.0% | |
| GCAAGGTACGCATCCCATTA+GGG | + | chr5.4:51345848-51345867 | MS.gene050023:intron | 50.0% | |
| GCCATGTTCCCACCAAGAAA+AGG | + | chr5.4:51345683-51345702 | MS.gene050023:CDS | 50.0% | |
| GGCATACAAGCATGGAGTTG+TGG | - | chr5.4:51347058-51347077 | None:intergenic | 50.0% | |
| GGTGGGTGATGTTGGATTGT+TGG | - | chr5.4:51347836-51347855 | None:intergenic | 50.0% | |
| GGTGTAGGAAGCGACACAAA+AGG | - | chr5.4:51345598-51345617 | None:intergenic | 50.0% | |
| TAGCTCCTTCCAATTCACGG+TGG | - | chr5.4:51346573-51346592 | None:intergenic | 50.0% | |
| TCACCTTTAATGCCTCCACC+AGG | - | chr5.4:51349034-51349053 | None:intergenic | 50.0% | |
| TCCAAACTTGCCAAGTGCAG+AGG | + | chr5.4:51349273-51349292 | MS.gene050023:CDS | 50.0% | |
| TCCTCTGCACTTGGCAAGTT+TGG | - | chr5.4:51349277-51349296 | None:intergenic | 50.0% | |
| TGCAAGGTACGCATCCCATT+AGG | + | chr5.4:51345847-51345866 | MS.gene050023:intron | 50.0% | |
| TGTCAAAGGACAAACAGGGC+TGG | - | chr5.4:51347555-51347574 | None:intergenic | 50.0% | |
| ! | GATTTTGTGCCAGCAGCCAT+AGG | + | chr5.4:51346993-51347012 | MS.gene050023:intron | 50.0% |
| !! | AGACTTGCTAGGATGTTGGC+GGG | - | chr5.4:51349139-51349158 | None:intergenic | 50.0% |
| !! | GGCTTTGGTCCTTTTCTTGG+TGG | - | chr5.4:51345695-51345714 | None:intergenic | 50.0% |
| !! | GGTGGAGGCATTAAAGGTGA+AGG | + | chr5.4:51349034-51349053 | MS.gene050023:CDS | 50.0% |
| !! | GTTCCTGGTGGAGGCATTAA+AGG | + | chr5.4:51349028-51349047 | MS.gene050023:CDS | 50.0% |
| AAGTGGAAGGCAGGTTACGG+AGG | - | chr5.4:51347095-51347114 | None:intergenic | 55.0% | |
| AGTGGAAGGCAGGTTACGGA+GGG | - | chr5.4:51347094-51347113 | None:intergenic | 55.0% | |
| CCAGCAGCCATAGGCTACAA+TGG | + | chr5.4:51347002-51347021 | MS.gene050023:intron | 55.0% | |
| CCATTGTAGCCTATGGCTGC+TGG | - | chr5.4:51347005-51347024 | None:intergenic | 55.0% | |
| GCACAAAATCCTCCACGCCT+TGG | - | chr5.4:51346983-51347002 | None:intergenic | 55.0% | |
| GCTAGTTAGTCCTCGCAACG+AGG | + | chr5.4:51346589-51346608 | MS.gene050023:CDS | 55.0% | |
| GGCCTATGGCAGAAACACAC+TGG | - | chr5.4:51347037-51347056 | None:intergenic | 55.0% | |
| TAAGGTAGGTGGAGAAGGGG+TGG | - | chr5.4:51347857-51347876 | None:intergenic | 55.0% | |
| TGTAGTCGTTCCTCGTTGCG+AGG | - | chr5.4:51346602-51346621 | None:intergenic | 55.0% | |
| TTGCTGCCATAGCAGCACCA+AGG | + | chr5.4:51346963-51346982 | MS.gene050023:intron | 55.0% | |
| ATAGCAGCACCAAGGCGTGG+AGG | + | chr5.4:51346971-51346990 | MS.gene050023:intron | 60.0% | |
| GGCAGCCACCGTGAATTGGA+AGG | + | chr5.4:51346565-51346584 | MS.gene050023:intron | 60.0% | |
| GTAGGTGGAGAAGGGGTGGT+GGG | - | chr5.4:51347853-51347872 | None:intergenic | 60.0% | |
| !! | GAAGGGGTGGTGGGTGATGT+TGG | - | chr5.4:51347844-51347863 | None:intergenic | 60.0% |
| !! | TCCACGCCTTGGTGCTGCTA+TGG | - | chr5.4:51346972-51346991 | None:intergenic | 60.0% |
| GCCATAGCAGCACCAAGGCG+TGG | + | chr5.4:51346968-51346987 | MS.gene050023:intron | 65.0% | |
| GGTAGGTGGAGAAGGGGTGG+TGG | - | chr5.4:51347854-51347873 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 51345532 | 51349303 | 51345532 | ID=MS.gene050023 |
| chr5.4 | mRNA | 51345532 | 51349303 | 51345532 | ID=MS.gene050023.t1;Parent=MS.gene050023 |
| chr5.4 | exon | 51345532 | 51345827 | 51345532 | ID=MS.gene050023.t1.exon1;Parent=MS.gene050023.t1 |
| chr5.4 | CDS | 51345532 | 51345827 | 51345532 | ID=cds.MS.gene050023.t1;Parent=MS.gene050023.t1 |
| chr5.4 | exon | 51346156 | 51346247 | 51346156 | ID=MS.gene050023.t1.exon2;Parent=MS.gene050023.t1 |
| chr5.4 | CDS | 51346156 | 51346247 | 51346156 | ID=cds.MS.gene050023.t1;Parent=MS.gene050023.t1 |
| chr5.4 | exon | 51346328 | 51346398 | 51346328 | ID=MS.gene050023.t1.exon3;Parent=MS.gene050023.t1 |
| chr5.4 | CDS | 51346328 | 51346398 | 51346328 | ID=cds.MS.gene050023.t1;Parent=MS.gene050023.t1 |
| chr5.4 | exon | 51346566 | 51346733 | 51346566 | ID=MS.gene050023.t1.exon4;Parent=MS.gene050023.t1 |
| chr5.4 | CDS | 51346566 | 51346733 | 51346566 | ID=cds.MS.gene050023.t1;Parent=MS.gene050023.t1 |
| chr5.4 | exon | 51349013 | 51349303 | 51349013 | ID=MS.gene050023.t1.exon5;Parent=MS.gene050023.t1 |
| chr5.4 | CDS | 51349013 | 51349303 | 51349013 | ID=cds.MS.gene050023.t1;Parent=MS.gene050023.t1 |
| Gene Sequence |
| Protein sequence |
