AlfalfaGEDB | MS.gene050028

M. sativa cultivar XinJiangDaYe / MS.gene050028

KEGG: K13424
GO: GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043565 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141
PFAM: PF03106.18

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene050028.t1	RHN56682.1	80.7	145	20	1	4	140	67	211	1.60E-56	228.8

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene050028.t1	Q6B6R4	48.2	112	52	3	28	139	215	320	1.4e-18	94.0

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene050028.t1	G7IXC7	80.7	145	20	1	4	140	183	327	1.1e-56	228.8

TFs/TRs:

Gene ID	Type	Classification
MS.gene050028.t1	TF	WRKY

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene050028.t1	MTR_5g074200	80.690	145	20	1	4	140	183	327	9.46e-80	238
MS.gene050028.t1	MTR_5g093540	77.037	135	15	1	6	140	131	249	9.22e-67	202
MS.gene050028.t1	MTR_5g074400	49.153	118	54	3	26	140	238	352	1.38e-27	106
MS.gene050028.t1	MTR_5g074400	57.895	57	23	1	33	88	420	476	6.74e-16	73.6
MS.gene050028.t1	MTR_3g031220	53.409	88	36	2	12	96	176	261	2.78e-24	96.3
MS.gene050028.t1	MTR_3g031220	53.409	88	36	2	12	96	176	261	6.92e-24	96.3
MS.gene050028.t1	MTR_3g031220	54.386	57	25	1	33	88	365	421	6.26e-14	67.8
MS.gene050028.t1	MTR_7g071120	57.746	71	30	0	26	96	159	229	8.64e-23	92.8
MS.gene050028.t1	MTR_7g071120	54.386	57	25	1	33	88	324	380	3.76e-14	68.6
MS.gene050028.t1	MTR_7g100510	68.421	57	18	0	34	90	190	246	3.18e-22	91.3
MS.gene050028.t1	MTR_7g100510	51.786	56	26	1	34	88	362	417	3.61e-12	62.8
MS.gene050028.t1	MTR_3g056100	55.556	72	31	1	33	104	99	169	2.16e-20	85.9
MS.gene050028.t1	MTR_3g056100	52.632	57	26	1	33	88	258	314	5.19e-14	68.2
MS.gene050028.t1	MTR_3g056100	55.556	72	31	1	33	104	99	169	2.35e-20	85.9
MS.gene050028.t1	MTR_3g056100	52.632	57	26	1	33	88	271	327	5.67e-14	67.8
MS.gene050028.t1	MTR_4g013260	43.860	114	58	5	18	128	168	278	2.52e-20	85.9
MS.gene050028.t1	MTR_4g013260	52.632	57	26	1	33	88	336	392	6.27e-13	65.1
MS.gene050028.t1	MTR_7g080020	60.938	64	25	0	33	96	280	343	2.68e-20	86.3
MS.gene050028.t1	MTR_7g080020	48.611	72	35	2	33	102	493	564	4.32e-14	68.2
MS.gene050028.t1	MTR_5g042920	60.000	65	25	1	33	97	151	214	4.55e-20	85.1
MS.gene050028.t1	MTR_5g042920	54.386	57	25	1	33	88	320	376	5.11e-15	70.9
MS.gene050028.t1	MTR_5g094430	57.812	64	27	0	33	96	66	129	2.29e-19	83.2
MS.gene050028.t1	MTR_5g094430	52.632	57	26	1	33	88	230	286	5.99e-14	67.8
MS.gene050028.t1	MTR_5g094430	57.812	64	27	0	33	96	88	151	2.39e-19	83.2
MS.gene050028.t1	MTR_5g094430	52.632	57	26	1	33	88	252	308	5.97e-14	67.8
MS.gene050028.t1	MTR_3g009470	57.812	64	27	0	33	96	280	343	2.67e-19	83.2
MS.gene050028.t1	MTR_3g056100	59.375	64	26	0	33	96	243	306	4.70e-18	79.7
MS.gene050028.t1	MTR_3g056100	52.632	57	26	1	33	88	402	458	4.91e-12	62.4
MS.gene050028.t1	MTR_7g080000	57.143	63	27	0	34	96	235	297	5.44e-18	79.3
MS.gene050028.t1	MTR_7g080000	52.632	57	26	1	33	88	432	488	1.36e-13	67.0
MS.gene050028.t1	MTR_3g056100	59.375	64	26	0	33	96	243	306	5.46e-18	79.3
MS.gene050028.t1	MTR_3g056100	52.632	57	26	1	33	88	415	471	5.86e-12	62.0
MS.gene050028.t1	MTR_7g011820	65.517	58	20	0	33	90	228	285	1.02e-17	78.6
MS.gene050028.t1	MTR_7g011820	40.741	108	49	5	33	133	410	509	8.72e-13	64.7
MS.gene050028.t1	MTR_5g094430	55.072	69	31	0	33	101	200	268	3.76e-17	77.0
MS.gene050028.t1	MTR_5g094430	52.632	57	26	1	33	88	364	420	7.72e-12	62.0
MS.gene050028.t1	MTR_3g009470	57.812	64	27	0	33	96	280	343	4.23e-17	77.0
MS.gene050028.t1	MTR_3g009470	54.386	57	25	1	33	88	495	551	3.89e-12	62.8
MS.gene050028.t1	MTR_4g082580	57.895	57	23	1	33	88	145	201	3.83e-16	73.9
MS.gene050028.t1	MTR_4g082580	41.573	89	50	2	33	119	278	366	4.39e-15	70.9
MS.gene050028.t1	MTR_1g077780	50.000	64	30	2	33	95	62	124	1.59e-14	66.2
MS.gene050028.t1	MTR_3g106060	37.209	86	48	3	34	113	139	224	1.60e-13	66.2
MS.gene050028.t1	MTR_8g007270	52.632	57	26	1	33	88	154	210	2.92e-13	64.7
MS.gene050028.t1	MTR_5g097490	33.333	102	62	2	34	129	93	194	3.19e-13	65.5
MS.gene050028.t1	MTR_5g097490	45.614	57	30	1	33	88	252	308	5.84e-12	62.0
MS.gene050028.t1	MTR_3g095080	50.877	57	27	1	33	88	168	224	3.27e-13	64.7
MS.gene050028.t1	MTR_8g092140	50.877	57	27	1	33	88	160	216	3.59e-13	64.3
MS.gene050028.t1	MTR_2g033820	42.667	75	41	2	27	99	196	270	4.12e-13	65.5
MS.gene050028.t1	MTR_3g095080	50.877	57	27	1	33	88	144	200	4.13e-13	63.9
MS.gene050028.t1	MTR_6g046600	68.293	41	13	0	50	90	19	59	8.72e-13	61.2
MS.gene050028.t1	MTR_4g094412	50.000	58	27	2	33	88	234	291	1.84e-12	63.5
MS.gene050028.t1	MTR_4g094412	50.000	58	27	2	33	88	243	300	1.90e-12	63.5
MS.gene050028.t1	MTR_7g079010	49.123	57	28	1	33	88	141	197	2.14e-12	62.0
MS.gene050028.t1	MTR_4g107970	48.276	58	28	2	33	88	178	235	3.05e-12	63.2
MS.gene050028.t1	MTR_5g091390	49.180	61	29	2	30	88	153	213	3.22e-12	62.4
MS.gene050028.t1	MTR_4g107970	48.276	58	28	2	33	88	255	312	3.40e-12	62.8
MS.gene050028.t1	MTR_7g028415	40.260	77	43	2	33	106	93	169	3.74e-12	60.8
MS.gene050028.t1	MTR_7g028710	40.260	77	43	2	33	106	93	169	3.74e-12	60.8
MS.gene050028.t1	MTR_8g096730	47.368	57	29	1	33	88	70	126	3.79e-12	60.1
MS.gene050028.t1	MTR_4g130900	44.643	56	30	1	34	88	360	415	6.63e-12	62.0
MS.gene050028.t1	MTR_5g073850	55.556	54	17	2	1	47	113	166	8.75e-12	59.7
MS.gene050028.t1	MTR_2g105060	43.860	57	30	2	34	88	95	151	9.45e-12	60.8
MS.gene050028.t1	MTR_2g105060	43.860	57	30	2	34	88	170	226	1.06e-11	61.2
MS.gene050028.t1	MTR_1g013760	40.580	69	39	2	34	100	141	209	1.36e-11	60.5
MS.gene050028.t1	MTR_1g086790	45.902	61	31	2	30	88	154	214	1.68e-11	60.5
MS.gene050028.t1	MTR_3g104750	45.614	57	30	1	33	88	104	160	2.21e-11	58.5
MS.gene050028.t1	MTR_7g109800	41.463	82	43	3	30	109	141	219	2.22e-11	60.1
MS.gene050028.t1	MTR_8g092010	42.857	77	40	2	16	88	88	164	2.41e-11	58.9
MS.gene050028.t1	MTR_4g122530	49.123	57	28	1	33	88	208	264	2.59e-11	60.1
MS.gene050028.t1	MTR_7g009730	48.276	58	28	2	33	88	219	276	3.20e-11	60.1
MS.gene050028.t1	MTR_4g007060	43.860	57	30	2	34	88	129	185	4.32e-11	59.3
MS.gene050028.t1	MTR_4g094588	38.095	84	49	3	33	114	178	260	5.06e-11	59.3
MS.gene050028.t1	MTR_4g007060	43.860	57	30	2	34	88	163	219	5.32e-11	59.3
MS.gene050028.t1	MTR_5g097500	42.667	75	43	0	21	95	71	145	5.37e-11	58.9
MS.gene050028.t1	MTR_5g097500	42.105	57	32	1	33	88	230	286	8.12e-11	58.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene050028.t1	AT5G07100	60.000	70	26	2	33	101	24	92	4.25e-23	90.5
MS.gene050028.t1	AT5G07100	54.386	57	25	1	33	88	141	197	7.38e-15	68.9
MS.gene050028.t1	AT5G07100	60.000	70	26	2	33	101	24	92	4.25e-23	90.5
MS.gene050028.t1	AT5G07100	54.386	57	25	1	33	88	141	197	7.38e-15	68.9
MS.gene050028.t1	AT5G07100	60.000	70	26	2	33	101	24	92	4.25e-23	90.5
MS.gene050028.t1	AT5G07100	54.386	57	25	1	33	88	141	197	7.38e-15	68.9
MS.gene050028.t1	AT5G07100	60.000	70	26	2	33	101	24	92	4.25e-23	90.5
MS.gene050028.t1	AT5G07100	54.386	57	25	1	33	88	141	197	7.38e-15	68.9
MS.gene050028.t1	AT5G07100	60.000	70	26	2	33	101	117	185	4.55e-23	92.0
MS.gene050028.t1	AT5G07100	54.386	57	25	1	33	88	234	290	5.94e-15	70.1
MS.gene050028.t1	AT2G38470	63.793	58	21	0	33	90	184	241	2.55e-22	91.7
MS.gene050028.t1	AT2G38470	54.386	57	25	1	33	88	362	418	1.25e-13	67.0
MS.gene050028.t1	AT1G13960	64.286	56	20	0	33	88	76	131	5.50e-21	87.0
MS.gene050028.t1	AT1G13960	54.386	57	25	1	33	88	256	312	4.85e-15	70.9
MS.gene050028.t1	AT2G37260	54.412	68	31	0	34	101	84	151	1.37e-20	85.9
MS.gene050028.t1	AT2G37260	54.412	68	31	0	34	101	86	153	1.51e-20	85.9
MS.gene050028.t1	AT2G37260	54.412	68	31	0	34	101	166	233	1.76e-20	86.3
MS.gene050028.t1	AT4G26640	62.069	58	22	0	33	90	171	228	1.56e-19	84.0
MS.gene050028.t1	AT4G26640	44.186	86	45	2	33	117	341	424	3.06e-14	68.9
MS.gene050028.t1	AT4G26640	62.069	58	22	0	33	90	211	268	1.61e-19	84.0
MS.gene050028.t1	AT4G26640	44.186	86	45	2	33	117	381	464	2.74e-14	68.9
MS.gene050028.t1	AT4G26640	62.069	58	22	0	33	90	139	196	1.75e-19	83.6
MS.gene050028.t1	AT4G26640	44.186	86	45	2	33	117	309	392	2.99e-14	68.9
MS.gene050028.t1	AT4G26640	62.069	58	22	0	33	90	35	92	2.21e-19	82.8
MS.gene050028.t1	AT4G26640	44.186	86	45	2	33	117	205	288	2.86e-14	68.6
MS.gene050028.t1	AT4G26640	62.069	58	22	0	33	90	35	92	2.21e-19	82.8
MS.gene050028.t1	AT4G26640	44.186	86	45	2	33	117	205	288	2.86e-14	68.6
MS.gene050028.t1	AT4G26640	62.069	58	22	0	33	90	35	92	2.21e-19	82.8
MS.gene050028.t1	AT4G26640	44.186	86	45	2	33	117	205	288	2.86e-14	68.6
MS.gene050028.t1	AT4G26640	62.069	58	22	0	33	90	35	92	2.21e-19	82.8
MS.gene050028.t1	AT4G26640	44.186	86	45	2	33	117	205	288	2.86e-14	68.6
MS.gene050028.t1	AT4G26440	62.069	58	22	0	33	90	178	235	3.99e-19	82.8
MS.gene050028.t1	AT4G26440	45.238	84	42	2	33	112	372	455	1.62e-12	63.9
MS.gene050028.t1	AT5G56270	63.793	58	21	0	33	90	273	330	7.66e-19	82.0
MS.gene050028.t1	AT5G56270	56.140	57	24	1	33	88	487	543	1.63e-13	66.6
MS.gene050028.t1	AT3G01080	62.500	56	21	0	33	88	205	260	1.08e-18	80.5
MS.gene050028.t1	AT2G30250	56.667	60	26	0	31	90	164	223	1.10e-18	81.3
MS.gene050028.t1	AT2G30250	47.692	65	32	2	34	97	329	392	9.55e-14	67.4
MS.gene050028.t1	AT1G13960	64.286	56	20	0	33	88	229	284	1.18e-18	81.3
MS.gene050028.t1	AT1G13960	54.386	57	25	1	33	88	409	465	7.36e-13	64.7
MS.gene050028.t1	AT3G01080	62.500	56	21	0	33	88	205	260	4.85e-18	79.7
MS.gene050028.t1	AT3G01080	56.140	57	24	1	33	88	344	400	5.31e-16	73.6
MS.gene050028.t1	AT2G03340	62.500	56	21	0	33	88	250	305	7.82e-18	79.0
MS.gene050028.t1	AT2G03340	54.386	57	25	1	33	88	415	471	9.47e-13	64.3
MS.gene050028.t1	AT3G01080	62.500	56	21	0	33	88	167	222	1.42e-17	78.2
MS.gene050028.t1	AT3G01080	56.140	57	24	1	33	88	306	362	1.59e-15	72.4
MS.gene050028.t1	AT2G04880	50.000	64	31	1	33	95	111	174	3.67e-17	77.0
MS.gene050028.t1	AT2G04880	47.368	57	29	1	33	88	283	339	1.78e-11	60.8
MS.gene050028.t1	AT2G04880	50.000	64	31	1	33	95	111	174	4.03e-17	77.0
MS.gene050028.t1	AT2G04880	47.368	57	29	1	33	88	307	363	1.98e-11	60.8
MS.gene050028.t1	AT4G12020	48.529	68	33	1	21	88	458	523	1.07e-15	73.2
MS.gene050028.t1	AT4G12020	48.529	68	33	1	21	88	458	523	1.07e-15	73.2
MS.gene050028.t1	AT4G12020	48.529	68	33	1	21	88	458	523	1.07e-15	73.2
MS.gene050028.t1	AT4G12020	48.529	68	33	1	21	88	458	523	1.07e-15	73.2
MS.gene050028.t1	AT4G12020	48.529	68	33	1	21	88	458	523	1.09e-15	73.2
MS.gene050028.t1	AT4G12020	48.529	68	33	1	21	88	458	523	1.14e-15	73.2
MS.gene050028.t1	AT4G12020	48.529	68	33	1	21	88	458	523	1.16e-15	72.8
MS.gene050028.t1	AT4G12020	48.529	68	33	1	21	88	458	523	1.16e-15	72.8
MS.gene050028.t1	AT4G12020	48.529	68	33	1	21	88	458	523	1.19e-15	72.8
MS.gene050028.t1	AT4G12020	48.529	68	33	1	21	88	391	456	1.25e-15	72.8
MS.gene050028.t1	AT4G12020	48.529	68	33	1	21	88	458	523	1.31e-15	72.8
MS.gene050028.t1	AT5G13080	49.123	57	28	1	33	88	67	123	8.63e-15	67.0
MS.gene050028.t1	AT1G64000	37.805	82	42	2	16	88	89	170	1.04e-13	65.5
MS.gene050028.t1	AT2G44745	52.632	57	26	1	33	88	145	201	2.11e-13	65.1
MS.gene050028.t1	AT5G41570	47.368	57	29	1	33	88	98	154	4.97e-13	63.2
MS.gene050028.t1	AT1G29860	41.250	80	44	3	27	104	129	207	5.70e-13	64.3
MS.gene050028.t1	AT2G46130	49.123	57	28	1	33	88	30	86	1.44e-12	60.5
MS.gene050028.t1	AT2G21900	42.857	70	39	1	20	88	96	165	2.23e-12	62.0
MS.gene050028.t1	AT1G55600	52.542	59	27	1	31	88	305	363	2.63e-12	63.2
MS.gene050028.t1	AT2G25000	39.394	66	38	2	34	97	104	169	3.79e-12	61.6
MS.gene050028.t1	AT2G25000	39.394	66	38	2	34	97	104	169	3.79e-12	61.6
MS.gene050028.t1	AT2G25000	39.394	66	38	2	34	97	126	191	3.98e-12	62.0
MS.gene050028.t1	AT5G49520	49.153	59	29	1	31	88	219	277	4.35e-12	62.4
MS.gene050028.t1	AT4G39410	49.123	57	28	1	33	88	223	279	5.44e-12	62.0
MS.gene050028.t1	AT2G25000	39.394	66	38	2	34	97	147	212	6.83e-12	61.2
MS.gene050028.t1	AT1G68150	48.276	58	28	2	33	88	235	292	1.07e-11	61.2
MS.gene050028.t1	AT4G18170	45.902	61	31	2	30	88	168	228	1.64e-11	60.5
MS.gene050028.t1	AT4G30935	42.857	56	31	1	34	88	332	387	1.89e-11	60.8
MS.gene050028.t1	AT4G30935	44.262	61	32	2	29	88	164	223	9.66e-11	58.5
MS.gene050028.t1	AT5G26170	43.333	60	33	1	33	91	113	172	2.23e-11	58.9
MS.gene050028.t1	AT5G15130	34.653	101	55	3	12	101	197	297	2.73e-11	60.5
MS.gene050028.t1	AT5G15130	33.981	103	57	3	10	101	153	255	3.03e-11	60.1
MS.gene050028.t1	AT2G47260	39.241	79	45	3	30	106	170	247	4.18e-11	59.7
MS.gene050028.t1	AT5G46350	35.000	100	60	2	33	127	183	282	4.99e-11	59.3
MS.gene050028.t1	AT5G64810	45.161	62	33	1	33	93	110	171	5.59e-11	58.2
MS.gene050028.t1	AT1G80840	43.860	57	30	2	34	88	147	203	7.39e-11	58.9

Find 16 sgRNAs with CRISPR-Local

Find 19 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ACCATGATGATGGGTATAAT+TGG	0.246954	5.4:+51235129	MS.gene050028:CDS
ATCATTTGGAAGTGAACAAT+TGG	0.346812	5.4:+51235397	MS.gene050028:CDS
ATTGATGCTGAAGACTTTGC+AGG	0.352973	5.4:-51235434	None:intergenic
GACTTGCAAGATCAATCATT+TGG	0.392633	5.4:+51235383	MS.gene050028:CDS
AAAATTTGTCTTTAAGAAGA+AGG	0.406219	5.4:+51235102	MS.gene050028:CDS
AAGAGAAAGTAGCAAAAGGA+AGG	0.448078	5.4:+51235162	MS.gene050028:CDS
AAGGTTGAGATAACTATAGA+TGG	0.449611	5.4:+51235239	MS.gene050028:CDS
AGAAGGATAAACCATGATGA+TGG	0.457113	5.4:+51235119	MS.gene050028:CDS
TATGAAGAGAAAGTAGCAAA+AGG	0.459364	5.4:+51235158	MS.gene050028:CDS
TCCAATTATACCCATCATCA+TGG	0.461024	5.4:-51235130	None:intergenic
AGCTAGCGTCTTCAATGAAG+AGG	0.558266	5.4:+51235306	MS.gene050028:CDS
GAAGGATAAACCATGATGAT+GGG	0.572923	5.4:+51235120	MS.gene050028:CDS
AGAGAAAGTAGCAAAAGGAA+GGG	0.578563	5.4:+51235163	MS.gene050028:CDS
TCAATGAGAGCAGTCTCTGA+AGG	0.608021	5.4:-51235362	None:intergenic
GAAGCTATTATAAATGTACA+TGG	0.617639	5.4:+51235195	MS.gene050028:CDS
ATTATTGAGACACTATACAA+AGG	0.688284	5.4:+51235266	MS.gene050028:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AAAATTTGTCTTTAAGAAGA+AGG	+	chr5.4:51235102-51235121	MS.gene050028:CDS	20.0%
!!!	TAATTGTTTTGTGAAGAAAA+AGG	+	chr5.4:51235220-51235239	MS.gene050028:CDS	20.0%
!!!	TTCTTAAAGACAAATTTTGT+TGG	-	chr5.4:51235100-51235119	None:intergenic	20.0%
!!!	TTTTTCTTCACAAAACAATT+AGG	-	chr5.4:51235221-51235240	None:intergenic	20.0%
!	ATTATTGAGACACTATACAA+AGG	+	chr5.4:51235266-51235285	MS.gene050028:CDS	25.0%
!	GAAGCTATTATAAATGTACA+TGG	+	chr5.4:51235195-51235214	MS.gene050028:CDS	25.0%
	AAGGTTGAGATAACTATAGA+TGG	+	chr5.4:51235239-51235258	MS.gene050028:CDS	30.0%
	ATCATTTGGAAGTGAACAAT+TGG	+	chr5.4:51235397-51235416	MS.gene050028:CDS	30.0%
	TATGAAGAGAAAGTAGCAAA+AGG	+	chr5.4:51235158-51235177	MS.gene050028:CDS	30.0%
	AAGAGAAAGTAGCAAAAGGA+AGG	+	chr5.4:51235162-51235181	MS.gene050028:CDS	35.0%
	AGAAGGATAAACCATGATGA+TGG	+	chr5.4:51235119-51235138	MS.gene050028:CDS	35.0%
	AGAGAAAGTAGCAAAAGGAA+GGG	+	chr5.4:51235163-51235182	MS.gene050028:CDS	35.0%
	GAAGGATAAACCATGATGAT+GGG	+	chr5.4:51235120-51235139	MS.gene050028:CDS	35.0%
	GACTTGCAAGATCAATCATT+TGG	+	chr5.4:51235383-51235402	MS.gene050028:CDS	35.0%
	TCCAATTATACCCATCATCA+TGG	-	chr5.4:51235133-51235152	None:intergenic	35.0%
!!	ACCATGATGATGGGTATAAT+TGG	+	chr5.4:51235129-51235148	MS.gene050028:CDS	35.0%
	ATTGATGCTGAAGACTTTGC+AGG	-	chr5.4:51235437-51235456	None:intergenic	40.0%
	AGCTAGCGTCTTCAATGAAG+AGG	+	chr5.4:51235306-51235325	MS.gene050028:CDS	45.0%
	TCAATGAGAGCAGTCTCTGA+AGG	-	chr5.4:51235365-51235384	None:intergenic	45.0%

Chromosome	Type	Strat	End	Strand	Name
chr5.4	gene	51235038	51235460	51235038	ID=MS.gene050028
chr5.4	mRNA	51235038	51235460	51235038	ID=MS.gene050028.t1;Parent=MS.gene050028
chr5.4	exon	51235038	51235460	51235038	ID=MS.gene050028.t1.exon1;Parent=MS.gene050028.t1
chr5.4	CDS	51235038	51235460	51235038	ID=cds.MS.gene050028.t1;Parent=MS.gene050028.t1

Gene Sequence

>MS.gene050028

ATGGAAGCTGATGATATAGCTATAGAAGTTGATGCTGCAGATAGCAACAGAAATGAATTCCAACAAAATTTGTCTTTAAGAAGAAGGATAAACCATGATGATGGGTATAATTGGAAAAAGTATGAAGAGAAAGTAGCAAAAGGAAGGGAAAATCAAAGAAGCTATTATAAATGTACATGGCCTAATTGTTTTGTGAAGAAAAAGGTTGAGATAACTATAGATGGAGAAATTATTGAGACACTATACAAAGGTACACATAATCATTGTAAGCTAGCGTCTTCAATGAAGAGGATCTCATCATCTGAGTATCTTTATTCACTTTTACCTTCAGAGACTGCTCTCATTGACTTGCAAGATCAATCATTTGGAAGTGAACAATTGGATTCTGATGAAGAACCTGCAAAGTCTTCAGCATCAATATGA

Protein sequence

>MS.gene050028.t1

MEADDIAIEVDAADSNRNEFQQNLSLRRRINHDDGYNWKKYEEKVAKGRENQRSYYKCTWPNCFVKKKVEITIDGEIIETLYKGTHNHCKLASSMKRISSSEYLYSLLPSETALIDLQDQSFGSEQLDSDEEPAKSSASI