AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene05019

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene05019.t1 MTR_3g064580 96.731 673 21 1 1 673 1 672 0.0 1369
MS.gene05019.t1 MTR_5g076850 63.704 675 206 20 1 668 1 643 0.0 810
MS.gene05019.t1 MTR_2g064090 51.274 314 131 7 1 300 1 306 7.79e-91 286
MS.gene05019.t1 MTR_6g477900 75.309 162 39 1 1 162 1 161 6.59e-89 277
MS.gene05019.t1 MTR_5g014300 65.244 164 46 2 1 157 1 160 3.36e-70 232
MS.gene05019.t1 MTR_4g098630 53.886 193 74 4 1 180 1 191 4.19e-64 215
MS.gene05019.t1 MTR_8g076110 47.619 189 89 3 1 188 1 180 2.59e-59 202
MS.gene05019.t1 MTR_3g093040 58.599 157 64 1 1 157 103 258 5.33e-59 201
MS.gene05019.t1 MTR_1g097300 60.494 162 62 2 8 169 21 180 8.27e-59 208
MS.gene05019.t1 MTR_5g069030 63.158 152 55 1 6 157 25 175 9.12e-59 209
MS.gene05019.t1 MTR_3g093050 62.745 153 56 1 5 157 21 172 1.01e-58 208
MS.gene05019.t1 MTR_3g093050 62.745 153 56 1 5 157 21 172 1.60e-58 208
MS.gene05019.t1 MTR_0036s0150 60.123 163 61 3 8 169 7 166 9.52e-58 204
MS.gene05019.t1 MTR_4g036030 55.556 153 64 2 6 157 7 156 1.03e-57 199
MS.gene05019.t1 MTR_2g079990 56.604 159 66 2 1 159 11 166 3.22e-57 198
MS.gene05019.t1 MTR_1g090723 58.896 163 63 3 8 169 10 169 1.07e-56 202
MS.gene05019.t1 MTR_4g101680 52.439 164 72 3 6 167 7 166 1.37e-56 196
MS.gene05019.t1 MTR_3g096140 55.215 163 69 3 8 169 9 168 1.47e-56 193
MS.gene05019.t1 MTR_1g090723 58.896 163 63 3 8 169 10 169 1.54e-56 203
MS.gene05019.t1 MTR_1g096430 56.774 155 63 2 6 159 7 158 1.84e-56 195
MS.gene05019.t1 MTR_1g090720 58.721 172 65 2 4 170 40 210 3.17e-56 199
MS.gene05019.t1 MTR_5g021710 53.205 156 69 2 6 160 8 160 8.85e-56 194
MS.gene05019.t1 MTR_2g062730 53.846 156 67 3 4 157 8 160 1.34e-55 193
MS.gene05019.t1 MTR_3g088110 53.409 176 77 3 4 177 5 177 1.36e-55 191
MS.gene05019.t1 MTR_3g096140 55.215 163 69 3 8 169 9 168 1.40e-55 193
MS.gene05019.t1 MTR_8g059170 56.875 160 66 2 1 159 9 166 1.82e-55 192
MS.gene05019.t1 MTR_4g035590 48.128 187 88 5 5 188 7 187 2.03e-55 193
MS.gene05019.t1 MTR_7g005280 58.580 169 59 5 4 170 13 172 3.03e-55 189
MS.gene05019.t1 MTR_1g090723 58.537 164 63 4 8 169 10 170 7.03e-55 198
MS.gene05019.t1 MTR_5g012080 55.484 155 63 4 6 157 7 158 7.32e-55 191
MS.gene05019.t1 MTR_6g084430 56.442 163 64 3 6 168 5 160 1.74e-54 189
MS.gene05019.t1 MTR_8g063550 52.071 169 79 2 1 169 1 167 6.37e-54 188
MS.gene05019.t1 MTR_2g080010 54.545 165 61 3 6 158 15 177 8.50e-54 188
MS.gene05019.t1 MTR_8g063550 52.071 169 79 2 1 169 1 167 8.95e-54 191
MS.gene05019.t1 MTR_8g063550 52.071 169 79 2 1 169 1 167 1.07e-53 191
MS.gene05019.t1 MTR_4g081870 53.459 159 69 3 2 157 5 161 1.76e-53 185
MS.gene05019.t1 MTR_4g108760 54.430 158 69 2 4 160 15 170 2.00e-53 187
MS.gene05019.t1 MTR_6g012670 55.128 156 67 2 6 160 20 173 3.01e-53 186
MS.gene05019.t1 MTR_5g041940 53.125 160 70 3 4 160 1 158 3.59e-53 184
MS.gene05019.t1 MTR_8g024480 50.307 163 68 3 6 157 15 175 9.70e-53 188
MS.gene05019.t1 MTR_8g094580 45.833 216 94 6 4 199 5 217 9.85e-53 183
MS.gene05019.t1 MTR_2g079990 47.849 186 68 2 1 159 11 194 1.53e-52 186
MS.gene05019.t1 MTR_1g008740 57.962 157 59 5 5 158 12 164 1.79e-52 185
MS.gene05019.t1 MTR_1g008740 57.962 157 59 5 5 158 26 178 2.46e-52 185
MS.gene05019.t1 MTR_3g435150 50.000 184 84 3 6 188 16 192 2.70e-52 183
MS.gene05019.t1 MTR_7g085220 51.765 170 62 4 4 158 6 170 3.24e-52 184
MS.gene05019.t1 MTR_2g078700 58.333 156 60 4 6 158 23 176 4.81e-52 184
MS.gene05019.t1 MTR_6g032770 50.898 167 75 4 3 165 15 178 6.14e-52 184
MS.gene05019.t1 MTR_3g109340 51.397 179 76 4 5 181 21 190 1.98e-51 182
MS.gene05019.t1 MTR_3g096920 54.375 160 68 3 4 161 5 161 4.07e-51 179
MS.gene05019.t1 MTR_6g011860 50.000 166 72 3 6 162 15 178 5.42e-51 182
MS.gene05019.t1 MTR_3g109340 50.838 179 76 4 5 181 21 189 8.74e-51 180
MS.gene05019.t1 MTR_2157s0010 51.829 164 66 4 6 158 8 169 1.09e-50 177
MS.gene05019.t1 MTR_7g085260 41.667 240 113 6 4 236 15 234 2.47e-50 180
MS.gene05019.t1 MTR_8g093580 49.112 169 84 2 1 169 1 167 2.56e-50 182
MS.gene05019.t1 MTR_2g064470 51.163 172 77 3 1 169 6 173 3.34e-50 177
MS.gene05019.t1 MTR_4g134460 52.597 154 67 3 8 160 56 204 5.91e-50 180
MS.gene05019.t1 MTR_2g086880 53.247 154 63 2 1 154 13 157 6.85e-50 182
MS.gene05019.t1 MTR_1g069805 54.487 156 62 3 4 157 8 156 1.06e-49 175
MS.gene05019.t1 MTR_4g089135 48.168 191 70 5 6 169 15 203 1.31e-49 177
MS.gene05019.t1 MTR_2g086880 53.247 154 63 2 1 154 13 157 1.60e-49 182
MS.gene05019.t1 MTR_3g070030 45.699 186 90 3 4 187 17 193 4.60e-49 176
MS.gene05019.t1 MTR_7g097090 54.545 154 61 3 4 155 8 154 1.41e-48 172
MS.gene05019.t1 MTR_3g096920 54.967 151 62 3 4 154 5 149 1.93e-48 173
MS.gene05019.t1 MTR_8g467490 44.560 193 84 5 8 179 16 206 1.98e-48 175
MS.gene05019.t1 MTR_5g040420 44.444 189 91 6 8 184 16 202 6.66e-48 173
MS.gene05019.t1 MTR_7g100990 49.686 159 73 5 4 157 9 165 7.44e-48 171
MS.gene05019.t1 MTR_2g093810 51.899 158 69 4 5 157 13 168 1.06e-47 171
MS.gene05019.t1 MTR_3g096140 52.349 149 67 3 22 169 2 147 2.83e-46 167
MS.gene05019.t1 MTR_3g116070 59.542 131 48 3 6 133 23 151 7.83e-45 164
MS.gene05019.t1 MTR_7g011130 54.962 131 57 1 4 134 17 145 1.94e-44 163
MS.gene05019.t1 MTR_2g068880 48.485 165 70 4 8 158 24 187 2.49e-44 161
MS.gene05019.t1 MTR_2g068920 45.977 174 79 3 8 167 23 195 8.10e-44 159
MS.gene05019.t1 MTR_4g075980 46.341 164 75 4 8 168 17 170 4.80e-43 157
MS.gene05019.t1 MTR_5g090970 48.447 161 70 4 8 157 20 178 1.39e-42 156
MS.gene05019.t1 MTR_5g090970 47.205 161 71 4 8 157 20 177 7.37e-42 154
MS.gene05019.t1 MTR_7g011120 53.435 131 59 1 4 134 6 134 2.20e-41 153
MS.gene05019.t1 MTR_3g070040 44.970 169 85 3 4 169 6 169 3.95e-41 153
MS.gene05019.t1 MTR_8g099750 50.323 155 67 3 6 154 14 164 4.53e-41 149
MS.gene05019.t1 MTR_8g023840 45.946 185 84 5 6 184 11 185 9.11e-41 154
MS.gene05019.t1 MTR_8g023860 45.109 184 91 4 6 186 12 188 3.43e-38 147
MS.gene05019.t1 MTR_3g098810 47.826 161 71 4 6 157 14 170 1.24e-37 140
MS.gene05019.t1 MTR_3g098810 52.273 132 55 2 6 133 14 141 4.35e-37 137
MS.gene05019.t1 MTR_4g052620 33.735 249 145 7 6 236 5 251 7.71e-36 136
MS.gene05019.t1 MTR_8g023900 45.625 160 77 5 5 160 11 164 2.10e-35 140
MS.gene05019.t1 MTR_8g023900 37.089 213 110 7 1 205 184 380 6.97e-33 132
MS.gene05019.t1 MTR_8g023930 37.561 205 112 5 6 207 24 215 9.27e-35 138
MS.gene05019.t1 MTR_2g086690 42.405 158 80 5 7 155 5 160 1.67e-34 132
MS.gene05019.t1 MTR_7g105170 36.453 203 109 8 6 190 4 204 2.00e-34 132
MS.gene05019.t1 MTR_8g094580 42.675 157 69 5 63 199 8 163 8.46e-32 124
MS.gene05019.t1 MTR_4g094302 44.615 130 60 3 6 133 11 130 1.06e-29 115
MS.gene05019.t1 MTR_4g094302 44.615 130 60 3 6 133 11 130 1.38e-29 116
MS.gene05019.t1 MTR_8g023880 36.735 196 88 8 4 182 5 181 2.77e-27 112
MS.gene05019.t1 MTR_7g070140 59.259 81 31 2 56 134 12 92 4.45e-25 101
MS.gene05019.t1 MTR_8g093790 37.662 154 73 6 4 157 8 138 1.68e-20 90.1
MS.gene05019.t1 MTR_3g096400 31.111 180 105 5 4 172 5 176 1.64e-19 87.8
MS.gene05019.t1 MTR_7g083330 35.659 129 79 3 4 131 16 141 8.16e-19 85.5
MS.gene05019.t1 MTR_7g083360 33.333 156 96 5 2 156 6 154 2.31e-17 80.1
MS.gene05019.t1 MTR_7g083370 32.824 131 84 3 6 135 10 137 5.80e-16 75.9
MS.gene05019.t1 MTR_7g070150 59.016 61 20 3 98 157 1 57 8.68e-16 73.6
MS.gene05019.t1 MTR_1g087190 58.696 46 18 1 8 52 7 52 3.28e-13 65.1
MS.gene05019.t1 MTR_7g116460 31.250 160 91 9 12 161 11 161 3.95e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene05019.t1 AT1G65910 44.169 686 303 23 1 664 1 628 9.74e-165 487
MS.gene05019.t1 AT5G17260 39.652 575 209 19 1 563 1 449 8.54e-120 366
MS.gene05019.t1 AT3G03200 49.573 351 143 8 1 343 1 325 1.91e-105 329
MS.gene05019.t1 AT3G17730 77.160 162 36 1 1 162 1 161 1.45e-91 285
MS.gene05019.t1 AT1G54330 73.494 166 40 1 1 166 1 162 6.39e-82 261
MS.gene05019.t1 AT4G17980 64.375 160 54 2 1 157 1 160 4.33e-68 224
MS.gene05019.t1 AT4G17980 64.375 160 54 2 1 157 1 160 5.06e-68 224
MS.gene05019.t1 AT5G46590 59.627 161 64 1 1 160 1 161 4.55e-67 222
MS.gene05019.t1 AT5G04410 63.473 167 57 3 4 169 7 170 5.88e-64 222
MS.gene05019.t1 AT3G10500 62.651 166 60 2 4 169 7 170 8.92e-64 221
MS.gene05019.t1 AT1G32510 54.839 186 70 2 1 172 1 186 3.27e-63 211
MS.gene05019.t1 AT5G46590 63.194 144 48 2 1 143 1 140 1.54e-62 209
MS.gene05019.t1 AT3G10480 59.412 170 68 1 1 170 22 190 2.64e-62 214
MS.gene05019.t1 AT1G33060 61.438 153 58 1 5 157 23 174 6.10e-62 218
MS.gene05019.t1 AT1G33060 61.438 153 58 1 5 157 23 174 7.09e-62 218
MS.gene05019.t1 AT3G10490 59.639 166 66 1 5 170 26 190 2.17e-61 205
MS.gene05019.t1 AT4G35580 62.092 153 57 1 5 157 8 159 5.15e-61 213
MS.gene05019.t1 AT4G35580 62.092 153 57 1 5 157 8 159 5.30e-61 213
MS.gene05019.t1 AT4G35580 62.092 153 57 1 5 157 8 159 5.32e-61 213
MS.gene05019.t1 AT1G34190 60.000 165 58 3 8 169 18 177 6.92e-61 213
MS.gene05019.t1 AT3G10480 58.824 170 68 2 1 170 22 189 2.23e-60 209
MS.gene05019.t1 AT3G10490 59.281 167 67 1 4 170 25 190 1.39e-59 207
MS.gene05019.t1 AT4G10350 50.526 190 88 5 6 192 9 195 9.75e-59 201
MS.gene05019.t1 AT4G27410 57.862 159 64 2 1 159 9 164 1.43e-58 199
MS.gene05019.t1 AT1G33280 54.118 170 71 4 6 174 8 171 1.64e-58 200
MS.gene05019.t1 AT1G34180 57.576 165 62 3 8 169 18 177 2.81e-58 203
MS.gene05019.t1 AT3G15500 59.119 159 62 2 1 159 9 164 1.45e-57 197
MS.gene05019.t1 AT5G24590 55.556 162 70 2 1 161 8 168 2.00e-57 201
MS.gene05019.t1 AT1G34180 57.576 165 62 3 8 169 18 177 2.14e-57 204
MS.gene05019.t1 AT3G18400 56.774 155 63 2 6 160 5 155 2.37e-57 197
MS.gene05019.t1 AT3G10480 50.246 203 67 2 1 170 22 223 5.24e-57 202
MS.gene05019.t1 AT1G52890 52.514 179 82 2 1 179 9 184 9.75e-57 195
MS.gene05019.t1 AT5G66300 54.321 162 71 2 4 164 10 169 1.38e-56 194
MS.gene05019.t1 AT2G18060 50.588 170 80 2 1 169 4 170 1.54e-56 196
MS.gene05019.t1 AT2G18060 50.588 170 80 2 1 169 4 170 1.54e-56 196
MS.gene05019.t1 AT1G12260 50.307 163 77 2 6 167 7 166 1.76e-56 196
MS.gene05019.t1 AT1G71930 41.961 255 131 6 5 258 8 246 1.85e-56 195
MS.gene05019.t1 AT1G71930 41.961 255 131 6 5 258 8 246 1.85e-56 195
MS.gene05019.t1 AT1G12260 50.307 163 77 2 6 167 7 166 4.20e-56 196
MS.gene05019.t1 AT2G24430 59.615 156 57 3 5 158 15 166 4.48e-56 193
MS.gene05019.t1 AT2G24430 59.615 156 57 3 5 158 15 166 4.48e-56 193
MS.gene05019.t1 AT5G39610 44.068 236 124 5 4 238 18 246 1.91e-55 191
MS.gene05019.t1 AT1G62700 49.419 172 83 2 6 176 7 175 2.00e-55 194
MS.gene05019.t1 AT1G62700 49.419 172 83 2 6 176 7 175 2.00e-55 194
MS.gene05019.t1 AT4G27410 52.841 176 63 3 1 159 9 181 2.29e-55 191
MS.gene05019.t1 AT4G36160 52.903 155 69 2 4 157 8 159 2.60e-55 193
MS.gene05019.t1 AT4G36160 52.903 155 69 2 4 157 8 159 2.60e-55 193
MS.gene05019.t1 AT4G36160 52.903 155 69 2 4 157 12 163 2.66e-55 193
MS.gene05019.t1 AT1G34180 53.672 177 62 4 8 169 18 189 2.79e-55 196
MS.gene05019.t1 AT3G49530 54.430 158 70 2 5 161 12 168 1.55e-54 192
MS.gene05019.t1 AT5G64060 51.479 169 80 2 1 169 1 167 2.09e-54 190
MS.gene05019.t1 AT1G34180 53.672 177 62 4 8 169 18 189 2.62e-54 196
MS.gene05019.t1 AT3G49530 54.430 158 70 2 5 161 12 168 3.23e-54 193
MS.gene05019.t1 AT5G62380 54.194 155 63 3 6 157 7 156 6.33e-54 189
MS.gene05019.t1 AT5G62380 54.194 155 63 3 6 157 7 156 6.33e-54 189
MS.gene05019.t1 AT1G69490 56.410 156 63 4 5 157 8 161 9.78e-54 186
MS.gene05019.t1 AT3G04070 52.000 175 69 5 5 166 9 181 1.91e-53 187
MS.gene05019.t1 AT1G32770 50.000 164 68 3 6 157 16 177 3.80e-53 187
MS.gene05019.t1 AT1G79580 53.846 156 66 3 4 157 15 166 5.14e-53 187
MS.gene05019.t1 AT1G79580 53.846 156 66 3 4 157 15 166 5.14e-53 187
MS.gene05019.t1 AT1G79580 53.846 156 66 3 4 157 15 166 5.14e-53 187
MS.gene05019.t1 AT1G79580 53.846 156 66 3 4 157 15 166 5.14e-53 187
MS.gene05019.t1 AT1G79580 53.846 156 66 3 4 157 15 166 5.14e-53 187
MS.gene05019.t1 AT5G18270 55.758 165 66 4 4 163 19 181 5.36e-53 186
MS.gene05019.t1 AT5G07680 55.769 156 66 2 4 158 1 154 6.00e-53 185
MS.gene05019.t1 AT5G07680 55.769 156 66 2 4 158 15 168 7.15e-53 185
MS.gene05019.t1 AT5G53950 57.500 160 63 4 6 162 17 174 1.12e-52 186
MS.gene05019.t1 AT5G61430 55.128 156 67 2 4 158 14 167 1.32e-52 185
MS.gene05019.t1 AT3G29035 56.688 157 65 2 4 159 22 176 1.58e-52 184
MS.gene05019.t1 AT5G18270 55.152 165 67 4 4 163 19 181 1.92e-52 184
MS.gene05019.t1 AT2G02450 50.829 181 77 6 8 185 53 224 2.45e-52 185
MS.gene05019.t1 AT3G15170 55.000 160 67 4 6 162 20 177 2.68e-52 183
MS.gene05019.t1 AT2G02450 50.000 180 80 5 8 185 53 224 2.72e-52 186
MS.gene05019.t1 AT3G12977 51.572 159 75 1 1 159 13 169 3.60e-52 182
MS.gene05019.t1 AT1G01720 56.688 157 62 4 4 157 5 158 5.52e-52 181
MS.gene05019.t1 AT3G61910 47.399 173 70 4 6 161 11 179 6.15e-52 183
MS.gene05019.t1 AT5G09330 53.254 169 77 2 1 169 1 167 9.85e-52 187
MS.gene05019.t1 AT5G09330 53.254 169 77 2 1 169 1 167 9.85e-52 187
MS.gene05019.t1 AT5G09330 53.254 169 77 2 1 169 1 167 9.85e-52 187
MS.gene05019.t1 AT5G09330 53.254 169 77 2 1 169 1 167 9.85e-52 187
MS.gene05019.t1 AT5G09330 53.254 169 77 2 1 169 1 167 9.85e-52 187
MS.gene05019.t1 AT2G46770 49.701 167 67 3 6 157 16 180 3.45e-51 182
MS.gene05019.t1 AT1G77450 54.321 162 69 3 2 161 6 164 3.88e-51 178
MS.gene05019.t1 AT5G08790 49.468 188 83 5 4 187 5 184 5.46e-51 179
MS.gene05019.t1 AT3G04070 47.644 191 69 5 5 166 9 197 5.51e-51 181
MS.gene05019.t1 AT2G33480 53.896 154 65 2 4 157 13 160 7.58e-51 178
MS.gene05019.t1 AT2G33480 53.247 154 64 2 4 157 13 158 3.73e-50 176
MS.gene05019.t1 AT1G56010 54.268 164 66 5 1 159 14 173 4.63e-50 177
MS.gene05019.t1 AT1G26870 32.558 387 219 9 6 378 16 374 1.41e-49 179
MS.gene05019.t1 AT5G13180 55.769 156 60 3 4 157 12 160 2.42e-49 173
MS.gene05019.t1 AT1G76420 54.487 156 65 3 5 158 21 172 2.44e-49 176
MS.gene05019.t1 AT3G04060 55.769 156 65 3 4 157 18 171 2.47e-49 176
MS.gene05019.t1 AT5G39820 48.023 177 68 4 8 162 22 196 3.39e-49 176
MS.gene05019.t1 AT5G63790 47.396 192 87 5 2 182 46 234 4.95e-49 174
MS.gene05019.t1 AT5G63790 47.396 192 87 5 2 182 56 244 5.49e-49 174
MS.gene05019.t1 AT1G61110 49.419 172 73 3 6 165 16 185 5.52e-49 174
MS.gene05019.t1 AT3G44290 51.852 162 62 4 8 163 16 167 1.05e-48 171
MS.gene05019.t1 AT5G22290 50.649 154 68 2 1 154 16 161 1.70e-48 174
MS.gene05019.t1 AT1G32870 57.576 165 66 3 6 169 10 171 1.71e-48 178
MS.gene05019.t1 AT3G15510 49.171 181 65 4 10 178 21 186 1.82e-48 174
MS.gene05019.t1 AT1G32870 57.576 165 66 3 6 169 10 171 1.88e-48 178
MS.gene05019.t1 AT1G32870 57.576 165 66 3 6 169 46 207 3.03e-48 179
MS.gene05019.t1 AT3G44290 51.852 162 62 4 8 163 16 167 4.74e-48 172
MS.gene05019.t1 AT2G17040 51.829 164 66 5 8 168 8 161 1.21e-47 169
MS.gene05019.t1 AT2G27300 51.266 158 68 2 1 158 9 157 1.21e-47 171
MS.gene05019.t1 AT2G43000 53.289 152 69 1 8 159 20 169 1.48e-47 169
MS.gene05019.t1 AT4G28530 52.047 171 55 7 6 157 10 172 9.60e-46 166
MS.gene05019.t1 AT1G52880 53.049 164 64 5 10 162 21 182 9.23e-44 160
MS.gene05019.t1 AT5G04395 48.630 146 61 2 2 133 24 169 5.69e-39 142
MS.gene05019.t1 AT3G12910 45.509 167 72 5 8 158 23 186 7.93e-37 140
MS.gene05019.t1 AT4G10350 48.485 132 63 4 63 192 20 148 4.77e-36 137
MS.gene05019.t1 AT5G61430 58.763 97 39 1 63 158 8 104 3.92e-33 129
MS.gene05019.t1 AT3G12977 54.639 97 44 0 63 159 20 116 3.57e-32 124
MS.gene05019.t1 AT4G01520 46.212 132 66 3 7 133 5 136 7.22e-31 123
MS.gene05019.t1 AT5G22380 41.176 153 84 4 9 155 8 160 1.19e-30 120
MS.gene05019.t1 AT3G44350 40.260 154 88 3 9 158 8 161 2.04e-30 120
MS.gene05019.t1 AT1G56010 53.704 108 44 3 55 159 2 106 3.47e-30 120
MS.gene05019.t1 AT4G01540 45.385 130 66 3 9 133 7 136 4.57e-29 120
MS.gene05019.t1 AT4G01540 45.385 130 66 3 9 133 7 136 6.11e-29 119
MS.gene05019.t1 AT4G01540 45.385 130 66 3 9 133 7 136 6.83e-29 120
MS.gene05019.t1 AT4G01550 38.798 183 97 5 9 186 7 179 7.44e-29 120
MS.gene05019.t1 AT4G01540 45.385 130 66 3 9 133 7 136 8.87e-29 120
MS.gene05019.t1 AT2G33480 54.737 95 42 1 63 157 10 103 1.05e-28 114
MS.gene05019.t1 AT5G64530 42.537 134 61 4 4 135 1 120 1.46e-28 112
MS.gene05019.t1 AT4G28530 51.695 118 36 4 6 105 10 124 5.01e-28 115
MS.gene05019.t1 AT3G04420 37.821 156 89 3 7 160 4 153 2.20e-27 113
MS.gene05019.t1 AT5G64530 43.182 132 59 4 4 133 1 118 2.59e-27 109
MS.gene05019.t1 AT3G44350 42.748 131 71 3 9 135 8 138 2.93e-27 108
MS.gene05019.t1 AT3G04420 37.821 156 89 3 7 160 4 153 9.51e-27 112
MS.gene05019.t1 AT1G02230 43.846 130 65 4 7 131 4 130 8.04e-26 110
MS.gene05019.t1 AT3G10490 56.667 90 38 1 81 170 2 90 1.33e-25 109
MS.gene05019.t1 AT3G10490 56.667 90 38 1 81 170 2 90 1.33e-25 109
MS.gene05019.t1 AT1G02250 37.662 154 81 6 7 154 4 148 2.99e-23 102
MS.gene05019.t1 AT1G02220 39.370 127 72 2 7 131 4 127 2.67e-22 100
MS.gene05019.t1 AT1G01010 36.943 157 79 5 9 154 6 153 1.68e-21 98.2
MS.gene05019.t1 AT2G43000 50.000 90 45 0 70 159 2 91 2.32e-21 92.8
MS.gene05019.t1 AT2G18060 44.048 84 44 1 86 169 2 82 3.57e-19 88.6
MS.gene05019.t1 AT3G56530 32.468 154 98 3 4 155 50 199 6.59e-19 88.6
MS.gene05019.t1 AT3G55210 33.742 163 89 4 6 155 11 167 8.51e-19 87.8
MS.gene05019.t1 AT5G14000 33.333 132 82 2 4 133 13 140 1.16e-17 81.3
MS.gene05019.t1 AT5G50820 35.075 134 73 4 4 133 15 138 1.71e-17 81.6
MS.gene05019.t1 AT5G14000 33.333 132 82 2 4 133 13 140 1.08e-16 79.7
MS.gene05019.t1 AT5G22290 48.529 68 28 1 87 154 2 62 3.14e-15 76.3
MS.gene05019.t1 AT3G04430 33.083 133 75 5 12 132 6 136 5.19e-13 68.9
MS.gene05019.t1 AT1G28470 34.437 151 76 8 5 137 76 221 2.17e-11 66.2

Find 150 sgRNAs with CRISPR-Local

Find 253 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTCATCATTTCCCAATTA+TGG 0.131333 3.4:+66317399 MS.gene05019:CDS
AACACAAGATCAATTGAAAT+TGG 0.178255 3.4:+66318339 MS.gene05019:CDS
CTCTCTCTTAAGGAAGTTTA+AGG 0.184664 3.4:+66319402 MS.gene05019:CDS
TTTCATTGCCTCCTGGATTT+AGG 0.185491 3.4:+66315704 MS.gene05019:CDS
ATTAGGCGTGGATCCATAAT+TGG 0.208617 3.4:-66317412 None:intergenic
GGAATGAGCAAGAGAAAATT+TGG 0.218277 3.4:+66319608 MS.gene05019:CDS
TTGACTTCTTTGTTGATATT+TGG 0.231733 3.4:-66319088 None:intergenic
AGAGAGTATCCTTGATTCTT+TGG 0.242721 3.4:-66319385 None:intergenic
GCACTTGCTATTATCTTTGA+TGG 0.248482 3.4:-66319451 None:intergenic
CAATCCTTCCGCCGGTTTGC+AGG 0.250082 3.4:+66316852 MS.gene05019:CDS
TACCTCAAAAGAAAGATTAA+TGG 0.252239 3.4:+66315760 MS.gene05019:CDS
TATTAGTCCCATTCATGTTT+TGG 0.257396 3.4:-66317290 None:intergenic
ACATATTGCTCCCCAACTTT+TGG 0.262023 3.4:-66317138 None:intergenic
TCACGAGGGATGATGGAATT+TGG 0.274675 3.4:+66317337 MS.gene05019:CDS
TCATCTATAAAATTCTCATT+AGG 0.282892 3.4:-66319160 None:intergenic
AAGCTTGAAATTTCCTCAAT+TGG 0.293235 3.4:-66318897 None:intergenic
ATTTCAATTGATCTTGTGTT+TGG 0.306451 3.4:-66318336 None:intergenic
GAGCAACAAAATCTGGATAT+TGG 0.309075 3.4:+66316680 MS.gene05019:CDS
AACATTGATAATTTCTCAAT+AGG 0.311209 3.4:+66319118 MS.gene05019:CDS
CTATTGGTTCTTGACCCATT+TGG 0.316548 3.4:-66316658 None:intergenic
ACATTGATAATTTCTCAATA+GGG 0.325841 3.4:+66319119 MS.gene05019:CDS
CTGTACTCTTCTTGAATATA+CGG 0.326332 3.4:-66317107 None:intergenic
ACCAATAGAGCAACAAAATC+TGG 0.328796 3.4:+66316673 MS.gene05019:CDS
CAAGAGAAAATTTGGTTTGT+TGG 0.331645 3.4:+66319616 MS.gene05019:CDS
AGTTCAACTCAATCCAATTC+TGG 0.331873 3.4:+66319321 MS.gene05019:CDS
ATTGCTACCGGGAAAAGATT+TGG 0.335984 3.4:+66316600 MS.gene05019:CDS
TTGGGAAATGATGAAGATAT+TGG 0.344729 3.4:-66317393 None:intergenic
TTGTTTGTGAAGGTGTTATT+TGG 0.349202 3.4:-66319294 None:intergenic
ACACAAGATCAATTGAAATT+GGG 0.359406 3.4:+66318340 MS.gene05019:CDS
ACCTTGGATGGAGGGTAATT+AGG 0.366416 3.4:-66317429 None:intergenic
TCTGGATATTGGAAGGCAAC+TGG 0.376408 3.4:+66316691 MS.gene05019:CDS
ATCAAGGATACTCTCTCTTA+AGG 0.390216 3.4:+66319392 MS.gene05019:CDS
CATCTATAAAATTCTCATTA+GGG 0.392715 3.4:-66319159 None:intergenic
GCACCTGTTTCATTGCCTCC+TGG 0.396749 3.4:+66315697 MS.gene05019:CDS
CTCTTCCTCTATAGTAAACT+AGG 0.397058 3.4:-66316765 None:intergenic
CAGTGATTGCTCCAAAAGTT+GGG 0.399593 3.4:+66317127 MS.gene05019:CDS
ATAGCATGAAGAAAATCATT+TGG 0.409581 3.4:+66319587 MS.gene05019:CDS
AAATGAAACAGATATCTTGC+AGG 0.410733 3.4:+66318122 MS.gene05019:CDS
CACTTGTAGAGATCAACTTC+AGG 0.419704 3.4:-66315808 None:intergenic
TTCAATAACAAACTATCATA+TGG 0.425203 3.4:-66319729 None:intergenic
TTCTTTGCCTCCCTTGGAGG+TGG 0.430580 3.4:+66318023 MS.gene05019:CDS
TCAAAAGGTTGTTCCAATTG+AGG 0.434799 3.4:+66318884 MS.gene05019:CDS
GTTGGTATCAAAAGTGGTAA+AGG 0.438741 3.4:+66319634 MS.gene05019:CDS
TGCCATATGATTTGCATGCC+TGG 0.441673 3.4:-66317172 None:intergenic
GGTGCTTTGTGTTTATTTGA+AGG 0.441954 3.4:+66319501 MS.gene05019:CDS
AATCCAGGAGGCAATGAAAC+AGG 0.443707 3.4:-66315700 None:intergenic
GGATCTTGATAATGAATTCA+AGG 0.446485 3.4:+66318362 MS.gene05019:CDS
GAAGGAAGAGATGAAGCTAT+AGG 0.448143 3.4:+66317228 MS.gene05019:CDS
ACAGTGATTGCTCCAAAAGT+TGG 0.449271 3.4:+66317126 MS.gene05019:CDS
AAAGAGCCAAAGATATGGTT+AGG 0.454099 3.4:-66319690 None:intergenic
TCAAACTACTCACATGCATT+TGG 0.457307 3.4:+66318189 MS.gene05019:CDS
ACATGGATCTCGTACGGGTT+GGG 0.465197 3.4:+66316792 MS.gene05019:CDS
GAGGTGGTCTTGAAGAAGAT+AGG 0.470778 3.4:+66319661 MS.gene05019:CDS
GGGAATGTCACGAGGGATGA+TGG 0.471520 3.4:+66317330 MS.gene05019:CDS
AAAACCCTAGTTTACTATAG+AGG 0.471807 3.4:+66316760 MS.gene05019:CDS
GGTACAAAGAGCCAAAGATA+TGG 0.473498 3.4:-66319695 None:intergenic
TTTGGATACTTCCTATCCCT+AGG 0.475988 3.4:-66316640 None:intergenic
TGGTTTGTTGGTATCAAAAG+TGG 0.479971 3.4:+66319628 MS.gene05019:CDS
GTAGAGAATTTAAGATGGGT+TGG 0.480908 3.4:+66318396 MS.gene05019:CDS
TGGGATGTGCTTGGATCCCA+TGG 0.482178 3.4:-66317270 None:intergenic
AGCACATCCCAAAACATGAA+TGG 0.484763 3.4:+66317282 MS.gene05019:CDS
GCACATCCCAAAACATGAAT+GGG 0.487558 3.4:+66317283 MS.gene05019:CDS
CAAAGTCAGAATATGTGAAA+AGG 0.488239 3.4:+66319545 MS.gene05019:CDS
GACCAGGCATGCAAATCATA+TGG 0.490294 3.4:+66317170 MS.gene05019:CDS
AGGGATAGGAAGTATCCAAA+TGG 0.490813 3.4:+66316643 MS.gene05019:CDS
CTTTGGCTCTTTGTACCATG+TGG 0.492296 3.4:+66319701 MS.gene05019:CDS
ATGCATGTGAGTAGTTTGAT+TGG 0.498766 3.4:-66318185 None:intergenic
CCTGGTTCAAACCTGCAAAC+CGG 0.499476 3.4:-66316863 None:intergenic
GCTCAAGTTATTTGATGCCA+TGG 0.500480 3.4:+66317253 MS.gene05019:CDS
CACATGGATCTCGTACGGGT+TGG 0.504499 3.4:+66316791 MS.gene05019:CDS
TTAGGCGTGGATCCATAATT+GGG 0.504664 3.4:-66317411 None:intergenic
GATGGTAGAGAATTTAAGAT+GGG 0.510921 3.4:+66318392 MS.gene05019:CDS
GAAAGAACGTGTCTGCTACT+TGG 0.516699 3.4:-66319270 None:intergenic
TTCATTTCTAGTTCCACTCA+TGG 0.517202 3.4:-66318106 None:intergenic
CTGGATATTGGAAGGCAACT+GGG 0.521167 3.4:+66316692 MS.gene05019:CDS
CAGAATTCATACCAACTTGA+GGG 0.526968 3.4:-66318053 None:intergenic
TATAGGGAAGTCATTGCTAC+CGG 0.528788 3.4:+66316588 MS.gene05019:intron
TTTGGCTCTTTGTACCATGT+GGG 0.528855 3.4:+66319702 MS.gene05019:CDS
AATTCTCAGACTCGCGCCGT+TGG 0.530299 3.4:+66316730 MS.gene05019:CDS
CACAAGATCAATTGAAATTG+GGG 0.530743 3.4:+66318341 MS.gene05019:CDS
AACAAAATCTGGATATTGGA+AGG 0.532279 3.4:+66316684 MS.gene05019:CDS
TAATGGCCGTAGGATTGAGT+TGG 0.534104 3.4:+66315777 MS.gene05019:CDS
AGGGAAGTCTTCCACCTCCA+AGG 0.535115 3.4:-66318034 None:intergenic
GATATATTGATGACAAAGCA+TGG 0.540219 3.4:+66318307 MS.gene05019:CDS
CTCAAGTTATTTGATGCCAT+GGG 0.540843 3.4:+66317254 MS.gene05019:CDS
AGCACCACATGGATCTCGTA+CGG 0.542545 3.4:+66316786 MS.gene05019:CDS
TTGGATACTTCCTATCCCTA+GGG 0.543158 3.4:-66316639 None:intergenic
ATGATTATACCAAAGAATCA+AGG 0.544952 3.4:+66319376 MS.gene05019:CDS
TTTCAAGCTTCAAAACAAAG+AGG 0.547034 3.4:+66318910 MS.gene05019:CDS
GGATGGTAGAGAATTTAAGA+TGG 0.547842 3.4:+66318391 MS.gene05019:CDS
AAGATGACACAATTAGTCTC+AGG 0.549948 3.4:+66318081 MS.gene05019:CDS
TGTGAACCATGGGACTTGCC+AGG 0.552299 3.4:+66315829 MS.gene05019:CDS
GAAACAAGTTCTTCATCGGT+GGG 0.553122 3.4:-66315733 None:intergenic
TTAACTAGTAGTACCTTGGA+TGG 0.553196 3.4:-66317441 None:intergenic
ACTTGTAGAGATCAACTTCA+GGG 0.553531 3.4:-66315807 None:intergenic
TACAAGCTATGAAGTTGTTG+AGG 0.553873 3.4:+66319207 MS.gene05019:CDS
AACTACTCACATGCATTTGG+TGG 0.556142 3.4:+66318192 MS.gene05019:CDS
GGGATAGGAAGTATCCAAAT+GGG 0.558232 3.4:+66316644 MS.gene05019:CDS
ATAATGAATTCAAGGCTGAA+AGG 0.558323 3.4:+66318370 MS.gene05019:CDS
TGAATTCAAGGCTGAAAGGA+TGG 0.559338 3.4:+66318374 MS.gene05019:CDS
GTGAAAAGGAAATATAGCTA+TGG 0.559403 3.4:+66319559 MS.gene05019:CDS
TTTGTCATCAATATATCTCA+TGG 0.559559 3.4:-66318301 None:intergenic
GAATGTGACAATCCTTCCGC+CGG 0.560777 3.4:+66316844 MS.gene05019:CDS
AACAAAGAGGAAAGAGAATG+AGG 0.560950 3.4:+66318923 MS.gene05019:CDS
TGAACTTTGATTGTTTGTGA+AGG 0.561663 3.4:-66319304 None:intergenic
ATACTCTCAATAACAATGGT+GGG 0.561919 3.4:+66317310 MS.gene05019:CDS
ATAAGAAACAAGTTCTTCAT+CGG 0.563741 3.4:-66315737 None:intergenic
GAAACAACAAAAGTTAGTCA+TGG 0.565828 3.4:+66319229 MS.gene05019:CDS
ATTATACCTGGCAAGTCCCA+TGG 0.566661 3.4:-66315835 None:intergenic
TATCATATGGTTAGCCCACA+TGG 0.566918 3.4:-66319716 None:intergenic
AATACTCTCAATAACAATGG+TGG 0.568121 3.4:+66317309 MS.gene05019:CDS
CTAGTAGTACCTTGGATGGA+GGG 0.569534 3.4:-66317437 None:intergenic
AGCATTGAGTTGTACTCTGA+AGG 0.569905 3.4:+66317210 MS.gene05019:CDS
AGGAAAGAGAATGAGGTGCA+AGG 0.570770 3.4:+66318930 MS.gene05019:CDS
TGTTTATTTGAAGGAGCAAG+TGG 0.572910 3.4:+66319510 MS.gene05019:CDS
TACCGGGAAAAGATTTGGAA+TGG 0.574832 3.4:+66316605 MS.gene05019:CDS
AGTGTGCAAGGATGCAACAT+AGG 0.574842 3.4:+66317998 MS.gene05019:CDS
CAAGTTCTTCATCGGTGGGG+TGG 0.575721 3.4:-66315729 None:intergenic
GCCTAATTACCCTCCATCCA+AGG 0.579046 3.4:+66317428 MS.gene05019:CDS
AGAAACAAGTTCTTCATCGG+TGG 0.583246 3.4:-66315734 None:intergenic
GGGAAGTCTTCCACCTCCAA+GGG 0.583549 3.4:-66318033 None:intergenic
GTGGAAGACTTCCCTCAAGT+TGG 0.590146 3.4:+66318042 MS.gene05019:CDS
GTGGGGTGGAACCTAAATCC+AGG 0.594805 3.4:-66315715 None:intergenic
GTCAAGCAATGATTTAGAGA+AGG 0.598075 3.4:+66318422 MS.gene05019:CDS
TGATCTCCAACTCAATCCTA+CGG 0.598596 3.4:-66315783 None:intergenic
TCTCTACAAGTGTGAACCAT+GGG 0.599917 3.4:+66315819 MS.gene05019:CDS
TTAGTCTCAGGTTCCATGAG+TGG 0.599941 3.4:+66318093 MS.gene05019:CDS
TCAGAATTCATACCAACTTG+AGG 0.601198 3.4:-66318054 None:intergenic
GCACCACATGGATCTCGTAC+GGG 0.603965 3.4:+66316787 MS.gene05019:CDS
TCTTCCTCTATAGTAAACTA+GGG 0.609079 3.4:-66316764 None:intergenic
ACTAGTAGTACCTTGGATGG+AGG 0.611789 3.4:-66317438 None:intergenic
ATATAGCACTAGAGTGTGCA+AGG 0.612154 3.4:+66317986 MS.gene05019:CDS
GGATGGAGGGTAATTAGGCG+TGG 0.619170 3.4:-66317424 None:intergenic
CAAACCTGCAAACCGGCGGA+AGG 0.621776 3.4:-66316856 None:intergenic
GGCAACTGGGAAAGATCGCA+AGG 0.625751 3.4:+66316705 MS.gene05019:CDS
ATATATTGATGACAAAGCAT+GGG 0.629524 3.4:+66318308 MS.gene05019:CDS
ACTAATACTCTCAATAACAA+TGG 0.632242 3.4:+66317306 MS.gene05019:CDS
AGTGATTGCTCCAAAAGTTG+GGG 0.636145 3.4:+66317128 MS.gene05019:CDS
ATAGGGAAGTCATTGCTACC+GGG 0.636793 3.4:+66316589 MS.gene05019:intron
ATCTCTACAAGTGTGAACCA+TGG 0.647017 3.4:+66315818 MS.gene05019:CDS
AAGTCTTCCACCTCCAAGGG+AGG 0.647983 3.4:-66318030 None:intergenic
AAAGAAAGATTAATGGCCGT+AGG 0.654666 3.4:+66315767 MS.gene05019:CDS
GGTTCAAACCTGCAAACCGG+CGG 0.657789 3.4:-66316860 None:intergenic
ACAATGGTGGGAATGTCACG+AGG 0.659204 3.4:+66317322 MS.gene05019:CDS
AAACAAGTTCTTCATCGGTG+GGG 0.664766 3.4:-66315732 None:intergenic
TATAGAGGAAGAGCACCACA+TGG 0.688357 3.4:+66316775 MS.gene05019:CDS
AATATGTTAATAATGTGACC+AGG 0.693806 3.4:+66317154 MS.gene05019:CDS
CAATGGTGGGAATGTCACGA+GGG 0.727824 3.4:+66317323 MS.gene05019:CDS
GGGTGGAACCTAAATCCAGG+AGG 0.759574 3.4:-66315712 None:intergenic
CAACCCGTACGAGATCCATG+TGG 0.778709 3.4:-66316790 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATAATAAAAAATGTTCAAT+AGG - chr3.4:66317030-66317049 None:intergenic 10.0%
!! TTAAAATCTTTATTATTGTA+CGG - chr3.4:66317864-66317883 None:intergenic 10.0%
!! AAAAATTCTTAATTATTTGC+AGG + chr3.4:66317960-66317979 MS.gene05019:intron 15.0%
!! ACAATTTCCTATAATTTATT+TGG + chr3.4:66317924-66317943 MS.gene05019:intron 15.0%
!! AGTATACTTAATAAAATTCT+AGG - chr3.4:66318611-66318630 None:intergenic 15.0%
!! ATTATTATGACATGATTATA+GGG + chr3.4:66316572-66316591 MS.gene05019:intron 15.0%
!! GTATACTTAATAAAATTCTA+GGG - chr3.4:66318610-66318629 None:intergenic 15.0%
!! TACAGATTTAAAAAACAATA+AGG - chr3.4:66317744-66317763 None:intergenic 15.0%
!! TAGTATATGATTGTTTAATA+TGG + chr3.4:66316908-66316927 MS.gene05019:intron 15.0%
!! TATTATTATGACATGATTAT+AGG + chr3.4:66316571-66316590 MS.gene05019:intron 15.0%
!!! AATAATTTTACAGAGTTTTA+TGG + chr3.4:66318854-66318873 MS.gene05019:intron 15.0%
!!! ATTTAATAAGAAATTTTGAG+AGG + chr3.4:66316966-66316985 MS.gene05019:intron 15.0%
!!! ATTTTTATGTGATTATTGTA+CGG + chr3.4:66317576-66317595 MS.gene05019:intron 15.0%
!!! CATTTTTAAAATCCATTTTT+GGG - chr3.4:66318573-66318592 None:intergenic 15.0%
!!! TGAAAATGATTTTACTTTTA+TGG + chr3.4:66318239-66318258 MS.gene05019:CDS 15.0%
!! AAAGAATCTTAAAAAAGTGA+AGG + chr3.4:66316203-66316222 MS.gene05019:intron 20.0%
!! AATAAAAAATGTTCAATAGG+TGG - chr3.4:66317027-66317046 None:intergenic 20.0%
!! AATTAACATTGGACTTTATA+TGG + chr3.4:66318824-66318843 MS.gene05019:intron 20.0%
!! ACACCAAAACTTAATTAAAT+AGG + chr3.4:66317472-66317491 MS.gene05019:intron 20.0%
!! AGTAAGTTAAAAAAAATCCA+AGG - chr3.4:66319004-66319023 None:intergenic 20.0%
!! ATATTATAAAGTCCCAAAAA+TGG + chr3.4:66318558-66318577 MS.gene05019:intron 20.0%
!! ATGATTGACAAAATCATTAT+TGG + chr3.4:66316129-66316148 MS.gene05019:intron 20.0%
!! CATCTATAAAATTCTCATTA+GGG - chr3.4:66319162-66319181 None:intergenic 20.0%
!! GAATGTAATATTATTATACC+TGG - chr3.4:66315850-66315869 None:intergenic 20.0%
!! TATGATTGTTTAATATGGAT+CGG + chr3.4:66316913-66316932 MS.gene05019:intron 20.0%
!! TCATCTATAAAATTCTCATT+AGG - chr3.4:66319163-66319182 None:intergenic 20.0%
!! TTCATGACCAAATAAATTAT+AGG - chr3.4:66317934-66317953 None:intergenic 20.0%
!!! AAAATCATTATTGGTTAATG+TGG + chr3.4:66316138-66316157 MS.gene05019:intron 20.0%
!!! AACATTGATAATTTCTCAAT+AGG + chr3.4:66319118-66319137 MS.gene05019:CDS 20.0%
!!! AACCTTTACCTTTTAAATTT+TGG + chr3.4:66317837-66317856 MS.gene05019:intron 20.0%
!!! AATGAGAATTTTATAGATGA+TGG + chr3.4:66319163-66319182 MS.gene05019:CDS 20.0%
!!! AATGATTTTACTTTTATGGT+TGG + chr3.4:66318243-66318262 MS.gene05019:CDS 20.0%
!!! ACATTGATAATTTCTCAATA+GGG + chr3.4:66319119-66319138 MS.gene05019:CDS 20.0%
!!! AGTATATTTTTTTTGCACTT+TGG + chr3.4:66316305-66316324 MS.gene05019:intron 20.0%
!!! GAAAATTTTATAACAAGAAG+AGG + chr3.4:66316072-66316091 MS.gene05019:intron 20.0%
!!! GATTTTTTATTTTCCAGAAT+TGG - chr3.4:66319337-66319356 None:intergenic 20.0%
!!! GCATTTTTAAAATCCATTTT+TGG - chr3.4:66318574-66318593 None:intergenic 20.0%
!!! TAATGTTATCTTTTGAGTAT+TGG + chr3.4:66318716-66318735 MS.gene05019:intron 20.0%
!!! TGAAATTTTTTTGTGATTTC+AGG + chr3.4:66317068-66317087 MS.gene05019:intron 20.0%
!!! TTTATTTTTGTAATTGACCT+TGG + chr3.4:66318984-66319003 MS.gene05019:intron 20.0%
! AAACAGGCAAATATATAACT+AGG + chr3.4:66316507-66316526 MS.gene05019:intron 25.0%
! AAAGCTATTGTTAGTCAATT+TGG - chr3.4:66319042-66319061 None:intergenic 25.0%
! AACACAAGATCAATTGAAAT+TGG + chr3.4:66318339-66318358 MS.gene05019:CDS 25.0%
! AATATGTTAATAATGTGACC+AGG + chr3.4:66317154-66317173 MS.gene05019:CDS 25.0%
! AATTCTTAATTATTTGCAGG+TGG + chr3.4:66317963-66317982 MS.gene05019:intron 25.0%
! ACACAAGATCAATTGAAATT+GGG + chr3.4:66318340-66318359 MS.gene05019:CDS 25.0%
! ACTAATACTCTCAATAACAA+TGG + chr3.4:66317306-66317325 MS.gene05019:CDS 25.0%
! ATAAGAAACAAGTTCTTCAT+CGG - chr3.4:66315740-66315759 None:intergenic 25.0%
! ATAGCATGAAGAAAATCATT+TGG + chr3.4:66319587-66319606 MS.gene05019:CDS 25.0%
! ATGATTATACCAAAGAATCA+AGG + chr3.4:66319376-66319395 MS.gene05019:CDS 25.0%
! ATTTCAATTGATCTTGTGTT+TGG - chr3.4:66318339-66318358 None:intergenic 25.0%
! CCAAATAAAAAGTTGTTTAG+AGG + chr3.4:66317644-66317663 MS.gene05019:intron 25.0%
! CTAGTTAGTAATAAAGTTAG+AGG - chr3.4:66316891-66316910 None:intergenic 25.0%
! CTTTGGCATAAAATATTTAG+AGG + chr3.4:66316322-66316341 MS.gene05019:intron 25.0%
! GACCAAAATTTAAAAGGTAA+AGG - chr3.4:66317842-66317861 None:intergenic 25.0%
! GTCAATCATAACAAAATAAG+AGG - chr3.4:66316118-66316137 None:intergenic 25.0%
! TACCTCAAAAGAAAGATTAA+TGG + chr3.4:66315760-66315779 MS.gene05019:CDS 25.0%
! TATTCTTATGAGTACTATCA+AGG + chr3.4:66318748-66318767 MS.gene05019:intron 25.0%
! TTGACTTCTTTGTTGATATT+TGG - chr3.4:66319091-66319110 None:intergenic 25.0%
! TTTGTCATCAATATATCTCA+TGG - chr3.4:66318304-66318323 None:intergenic 25.0%
!! ATATATTGATGACAAAGCAT+GGG + chr3.4:66318308-66318327 MS.gene05019:CDS 25.0%
!! CCTCTAAACAACTTTTTATT+TGG - chr3.4:66317647-66317666 None:intergenic 25.0%
!! GTTTCTCTTGAAAATCATTT+TGG + chr3.4:66317668-66317687 MS.gene05019:intron 25.0%
!! TGGCCTATTTAATTAAGTTT+TGG - chr3.4:66317478-66317497 None:intergenic 25.0%
!!! ATATATTTGCCTGTTTTGAA+AGG - chr3.4:66316503-66316522 None:intergenic 25.0%
!!! GTTCATATTTGCACTTTTTT+TGG + chr3.4:66319480-66319499 MS.gene05019:CDS 25.0%
!!! TCTAGAATGATTTTACATTG+TGG - chr3.4:66317892-66317911 None:intergenic 25.0%
AAAACAGTCAACAAAAGGAA+AGG + chr3.4:66316444-66316463 MS.gene05019:intron 30.0%
AAAACCCTAGTTTACTATAG+AGG + chr3.4:66316760-66316779 MS.gene05019:CDS 30.0%
AAAATAATAGAGTCTACCGT+TGG - chr3.4:66316940-66316959 None:intergenic 30.0%
AAATGAAACAGATATCTTGC+AGG + chr3.4:66318122-66318141 MS.gene05019:CDS 30.0%
AACAAAATCTGGATATTGGA+AGG + chr3.4:66316684-66316703 MS.gene05019:CDS 30.0%
AAGCTTGAAATTTCCTCAAT+TGG - chr3.4:66318900-66318919 None:intergenic 30.0%
AATACTCTCAATAACAATGG+TGG + chr3.4:66317309-66317328 MS.gene05019:CDS 30.0%
ACATCAAATGATTGGATGTT+AGG - chr3.4:66318635-66318654 None:intergenic 30.0%
ACTCAAAAACAGTCAACAAA+AGG + chr3.4:66316439-66316458 MS.gene05019:intron 30.0%
ATAATGAATTCAAGGCTGAA+AGG + chr3.4:66318370-66318389 MS.gene05019:CDS 30.0%
ATACATGCACACAAAAATAG+AGG + chr3.4:66316005-66316024 MS.gene05019:intron 30.0%
ATACTCTCAATAACAATGGT+GGG + chr3.4:66317310-66317329 MS.gene05019:CDS 30.0%
CAAAGTCAGAATATGTGAAA+AGG + chr3.4:66319545-66319564 MS.gene05019:CDS 30.0%
CACAAGATCAATTGAAATTG+GGG + chr3.4:66318341-66318360 MS.gene05019:CDS 30.0%
CACCAAAAATCTGTAACAAA+TGG - chr3.4:66317498-66317517 None:intergenic 30.0%
CATAGTAATGAGGAAATAGT+TGG + chr3.4:66316409-66316428 MS.gene05019:intron 30.0%
CTGTACTCTTCTTGAATATA+CGG - chr3.4:66317110-66317129 None:intergenic 30.0%
GAAACAACAAAAGTTAGTCA+TGG + chr3.4:66319229-66319248 MS.gene05019:CDS 30.0%
GAAATTAACTAGTAGTACCT+TGG - chr3.4:66317448-66317467 None:intergenic 30.0%
GTGAAAAGGAAATATAGCTA+TGG + chr3.4:66319559-66319578 MS.gene05019:CDS 30.0%
TACATGTGACATCAAATGAT+TGG - chr3.4:66318643-66318662 None:intergenic 30.0%
TATTCAATATTATAGGGCCT+AGG - chr3.4:66318797-66318816 None:intergenic 30.0%
TCTTCATCATTTCCCAATTA+TGG + chr3.4:66317399-66317418 MS.gene05019:CDS 30.0%
TCTTCCTCTATAGTAAACTA+GGG - chr3.4:66316767-66316786 None:intergenic 30.0%
TGAACTTTGATTGTTTGTGA+AGG - chr3.4:66319307-66319326 None:intergenic 30.0%
TGTACGGACCAAAATTTAAA+AGG - chr3.4:66317848-66317867 None:intergenic 30.0%
TTGGGAAATGATGAAGATAT+TGG - chr3.4:66317396-66317415 None:intergenic 30.0%
TTTCAAGCTTCAAAACAAAG+AGG + chr3.4:66318910-66318929 MS.gene05019:CDS 30.0%
! AATTTTCAGCCTTTCAAAAC+AGG + chr3.4:66316491-66316510 MS.gene05019:intron 30.0%
! AGAATGATTTTACATTGTGG+AGG - chr3.4:66317889-66317908 None:intergenic 30.0%
! ATTAGTCCCATTCATGTTTT+GGG - chr3.4:66317292-66317311 None:intergenic 30.0%
! CTTTTCACATATTCTGACTT+TGG - chr3.4:66319547-66319566 None:intergenic 30.0%
! GATATATTGATGACAAAGCA+TGG + chr3.4:66318307-66318326 MS.gene05019:CDS 30.0%
! GATGGTAGAGAATTTAAGAT+GGG + chr3.4:66318392-66318411 MS.gene05019:CDS 30.0%
! TATTAGTCCCATTCATGTTT+TGG - chr3.4:66317293-66317312 None:intergenic 30.0%
!! AGGTTGATCTTTTAATCTCA+AGG - chr3.4:66316098-66316117 None:intergenic 30.0%
!! CAAGAGAAAATTTGGTTTGT+TGG + chr3.4:66319616-66319635 MS.gene05019:CDS 30.0%
!! GGATCTTGATAATGAATTCA+AGG + chr3.4:66318362-66318381 MS.gene05019:CDS 30.0%
!! TTGTTTGTGAAGGTGTTATT+TGG - chr3.4:66319297-66319316 None:intergenic 30.0%
!!! TTGTTGACTGTTTTTGAGTT+GGG - chr3.4:66316438-66316457 None:intergenic 30.0%
!!! TTTGTTGACTGTTTTTGAGT+TGG - chr3.4:66316439-66316458 None:intergenic 30.0%
!!! TTTTATGGAAGAGCATCAAA+AGG + chr3.4:66318869-66318888 MS.gene05019:CDS 30.0%
AAAAGATAGCCTACATATGG+TGG - chr3.4:66318535-66318554 None:intergenic 35.0%
AAAGAAAGATTAATGGCCGT+AGG + chr3.4:66315767-66315786 MS.gene05019:CDS 35.0%
AACAAAGAGGAAAGAGAATG+AGG + chr3.4:66318923-66318942 MS.gene05019:CDS 35.0%
ACCAAAAGATAGCCTACATA+TGG - chr3.4:66318538-66318557 None:intergenic 35.0%
ACCAATAGAGCAACAAAATC+TGG + chr3.4:66316673-66316692 MS.gene05019:CDS 35.0%
ACTTGTAGAGATCAACTTCA+GGG - chr3.4:66315810-66315829 None:intergenic 35.0%
AGTTCAACTCAATCCAATTC+TGG + chr3.4:66319321-66319340 MS.gene05019:CDS 35.0%
ATCAAGGATACTCTCTCTTA+AGG + chr3.4:66319392-66319411 MS.gene05019:CDS 35.0%
ATGCATGTGAGTAGTTTGAT+TGG - chr3.4:66318188-66318207 None:intergenic 35.0%
CAGAATTCATACCAACTTGA+GGG - chr3.4:66318056-66318075 None:intergenic 35.0%
CATAGAAATCCACCATATGT+AGG + chr3.4:66318523-66318542 MS.gene05019:intron 35.0%
CTCAAGTTATTTGATGCCAT+GGG + chr3.4:66317254-66317273 MS.gene05019:CDS 35.0%
CTCTCTCTTAAGGAAGTTTA+AGG + chr3.4:66319402-66319421 MS.gene05019:CDS 35.0%
CTCTTCCTCTATAGTAAACT+AGG - chr3.4:66316768-66316787 None:intergenic 35.0%
GAAACACATGCTTGCTTTAT+TGG + chr3.4:66316279-66316298 MS.gene05019:intron 35.0%
GAGAATGGTCCTTCAAAATA+GGG + chr3.4:66316363-66316382 MS.gene05019:intron 35.0%
GAGCAACAAAATCTGGATAT+TGG + chr3.4:66316680-66316699 MS.gene05019:CDS 35.0%
GCAAATATATAACTAGGTCG+AGG + chr3.4:66316513-66316532 MS.gene05019:intron 35.0%
GGAATGAGCAAGAGAAAATT+TGG + chr3.4:66319608-66319627 MS.gene05019:CDS 35.0%
GGATGGTAGAGAATTTAAGA+TGG + chr3.4:66318391-66318410 MS.gene05019:CDS 35.0%
GGTGCTTTGTGTTTATTTGA+AGG + chr3.4:66319501-66319520 MS.gene05019:CDS 35.0%
GTAATAAAGTTAGAGGTTCC+TGG - chr3.4:66316884-66316903 None:intergenic 35.0%
GTCAAGCAATGATTTAGAGA+AGG + chr3.4:66318422-66318441 MS.gene05019:CDS 35.0%
GTTGGTATCAAAAGTGGTAA+AGG + chr3.4:66319634-66319653 MS.gene05019:CDS 35.0%
TACAAGCTATGAAGTTGTTG+AGG + chr3.4:66319207-66319226 MS.gene05019:CDS 35.0%
TCAAAAGGTTGTTCCAATTG+AGG + chr3.4:66318884-66318903 MS.gene05019:CDS 35.0%
TCAAACTACTCACATGCATT+TGG + chr3.4:66318189-66318208 MS.gene05019:CDS 35.0%
TCAGAATTCATACCAACTTG+AGG - chr3.4:66318057-66318076 None:intergenic 35.0%
TGTTTATTTGAAGGAGCAAG+TGG + chr3.4:66319510-66319529 MS.gene05019:CDS 35.0%
TTAACTAGTAGTACCTTGGA+TGG - chr3.4:66317444-66317463 None:intergenic 35.0%
TTTAATATGGATCGGTCCAA+CGG + chr3.4:66316921-66316940 MS.gene05019:intron 35.0%
! AAGATGACACAATTAGTCTC+AGG + chr3.4:66318081-66318100 MS.gene05019:CDS 35.0%
! ACCATATGTAGGCTATCTTT+TGG + chr3.4:66318534-66318553 MS.gene05019:intron 35.0%
! CAAAAGTGGTAAAGGTTTTG+AGG + chr3.4:66319642-66319661 MS.gene05019:CDS 35.0%
! GGCCATTAATCTTTCTTTTG+AGG - chr3.4:66315765-66315784 None:intergenic 35.0%
! GTAGAGAATTTAAGATGGGT+TGG + chr3.4:66318396-66318415 MS.gene05019:CDS 35.0%
! TACCATTCCAAATCTTTTCC+CGG - chr3.4:66316610-66316629 None:intergenic 35.0%
! TAGGGTTTTCTTCATTCCAA+CGG - chr3.4:66316749-66316768 None:intergenic 35.0%
! TCCAGATTTTGTTGCTCTAT+TGG - chr3.4:66316677-66316696 None:intergenic 35.0%
!! AGAGAGTATCCTTGATTCTT+TGG - chr3.4:66319388-66319407 None:intergenic 35.0%
!! CAACAGTAACCCTATTTTGA+AGG - chr3.4:66316375-66316394 None:intergenic 35.0%
!! GCACTTGCTATTATCTTTGA+TGG - chr3.4:66319454-66319473 None:intergenic 35.0%
!! GGCCATTTGTTACAGATTTT+TGG + chr3.4:66317493-66317512 MS.gene05019:intron 35.0%
!! TGGTTTGTTGGTATCAAAAG+TGG + chr3.4:66319628-66319647 MS.gene05019:CDS 35.0%
!! TTCATTTCTAGTTCCACTCA+TGG - chr3.4:66318109-66318128 None:intergenic 35.0%
!!! AATGGTATTTTTTCAGCCCT+AGG + chr3.4:66316623-66316642 MS.gene05019:CDS 35.0%
!!! ATGGTATTTTTTCAGCCCTA+GGG + chr3.4:66316624-66316643 MS.gene05019:CDS 35.0%
!!! TCTTTTGAAATTGCTAGCCT+AGG + chr3.4:66318777-66318796 MS.gene05019:intron 35.0%
AAACAAGTTCTTCATCGGTG+GGG - chr3.4:66315735-66315754 None:intergenic 40.0%
AACTACTCACATGCATTTGG+TGG + chr3.4:66318192-66318211 MS.gene05019:CDS 40.0%
ACAGTGATTGCTCCAAAAGT+TGG + chr3.4:66317126-66317145 MS.gene05019:CDS 40.0%
ACTTAACGTTGTAGGGAGAA+TGG + chr3.4:66316348-66316367 MS.gene05019:intron 40.0%
AGAAACAAGTTCTTCATCGG+TGG - chr3.4:66315737-66315756 None:intergenic 40.0%
AGCACATCCCAAAACATGAA+TGG + chr3.4:66317282-66317301 MS.gene05019:CDS 40.0%
AGTGATTGCTCCAAAAGTTG+GGG + chr3.4:66317128-66317147 MS.gene05019:CDS 40.0%
ATATAGCACTAGAGTGTGCA+AGG + chr3.4:66317986-66318005 MS.gene05019:CDS 40.0%
ATCTCTACAAGTGTGAACCA+TGG + chr3.4:66315818-66315837 MS.gene05019:CDS 40.0%
ATTAGGCGTGGATCCATAAT+TGG - chr3.4:66317415-66317434 None:intergenic 40.0%
ATTGCTACCGGGAAAAGATT+TGG + chr3.4:66316600-66316619 MS.gene05019:CDS 40.0%
CACTTGTAGAGATCAACTTC+AGG - chr3.4:66315811-66315830 None:intergenic 40.0%
CAGTGATTGCTCCAAAAGTT+GGG + chr3.4:66317127-66317146 MS.gene05019:CDS 40.0%
CGTCAAGGTACATAGTAATG+AGG + chr3.4:66316399-66316418 MS.gene05019:intron 40.0%
GAAACAAGTTCTTCATCGGT+GGG - chr3.4:66315736-66315755 None:intergenic 40.0%
GAAGGAAGAGATGAAGCTAT+AGG + chr3.4:66317228-66317247 MS.gene05019:CDS 40.0%
GCACATCCCAAAACATGAAT+GGG + chr3.4:66317283-66317302 MS.gene05019:CDS 40.0%
GCTCAAGTTATTTGATGCCA+TGG + chr3.4:66317253-66317272 MS.gene05019:CDS 40.0%
GGAGAATGGTCCTTCAAAAT+AGG + chr3.4:66316362-66316381 MS.gene05019:intron 40.0%
GGTACAAAGAGCCAAAGATA+TGG - chr3.4:66319698-66319717 None:intergenic 40.0%
TACCGGGAAAAGATTTGGAA+TGG + chr3.4:66316605-66316624 MS.gene05019:CDS 40.0%
TATAGGGAAGTCATTGCTAC+CGG + chr3.4:66316588-66316607 MS.gene05019:intron 40.0%
TCTCTACAAGTGTGAACCAT+GGG + chr3.4:66315819-66315838 MS.gene05019:CDS 40.0%
TGAATTCAAGGCTGAAAGGA+TGG + chr3.4:66318374-66318393 MS.gene05019:CDS 40.0%
TGATCTCCAACTCAATCCTA+CGG - chr3.4:66315786-66315805 None:intergenic 40.0%
TTAGGCGTGGATCCATAATT+GGG - chr3.4:66317414-66317433 None:intergenic 40.0%
TTGGATACTTCCTATCCCTA+GGG - chr3.4:66316642-66316661 None:intergenic 40.0%
TTTCATTGCCTCCTGGATTT+AGG + chr3.4:66315704-66315723 MS.gene05019:CDS 40.0%
TTTGGATACTTCCTATCCCT+AGG - chr3.4:66316643-66316662 None:intergenic 40.0%
! ACATATTGCTCCCCAACTTT+TGG - chr3.4:66317141-66317160 None:intergenic 40.0%
! AGCATTGAGTTGTACTCTGA+AGG + chr3.4:66317210-66317229 MS.gene05019:CDS 40.0%
! TATCATATGGTTAGCCCACA+TGG - chr3.4:66319719-66319738 None:intergenic 40.0%
!! AGGGATAGGAAGTATCCAAA+TGG + chr3.4:66316643-66316662 MS.gene05019:CDS 40.0%
!! CTATTGGTTCTTGACCCATT+TGG - chr3.4:66316661-66316680 None:intergenic 40.0%
!! GGGATAGGAAGTATCCAAAT+GGG + chr3.4:66316644-66316663 MS.gene05019:CDS 40.0%
!! TTTGGCTCTTTGTACCATGT+GGG + chr3.4:66319702-66319721 MS.gene05019:CDS 40.0%
!!! AAGTGGTAAAGGTTTTGAGG+TGG + chr3.4:66319645-66319664 MS.gene05019:CDS 40.0%
!!! ATTTTTTCAGCCCTAGGGAT+AGG + chr3.4:66316629-66316648 MS.gene05019:CDS 40.0%
!!! TTCATGTTTTGGGATGTGCT+TGG - chr3.4:66317282-66317301 None:intergenic 40.0%
AATCCAGGAGGCAATGAAAC+AGG - chr3.4:66315703-66315722 None:intergenic 45.0%
ACCTTGGATGGAGGGTAATT+AGG - chr3.4:66317432-66317451 None:intergenic 45.0%
ACTAGTAGTACCTTGGATGG+AGG - chr3.4:66317441-66317460 None:intergenic 45.0%
AGGAAAGAGAATGAGGTGCA+AGG + chr3.4:66318930-66318949 MS.gene05019:CDS 45.0%
AGTGTGCAAGGATGCAACAT+AGG + chr3.4:66317998-66318017 MS.gene05019:CDS 45.0%
ATAGGGAAGTCATTGCTACC+GGG + chr3.4:66316589-66316608 MS.gene05019:intron 45.0%
ATTATACCTGGCAAGTCCCA+TGG - chr3.4:66315838-66315857 None:intergenic 45.0%
CTAGTAGTACCTTGGATGGA+GGG - chr3.4:66317440-66317459 None:intergenic 45.0%
CTGGATATTGGAAGGCAACT+GGG + chr3.4:66316692-66316711 MS.gene05019:CDS 45.0%
GAAAGAACGTGTCTGCTACT+TGG - chr3.4:66319273-66319292 None:intergenic 45.0%
GACCAGGCATGCAAATCATA+TGG + chr3.4:66317170-66317189 MS.gene05019:CDS 45.0%
GAGGCGTACTTAACGTTGTA+GGG + chr3.4:66316341-66316360 MS.gene05019:intron 45.0%
GGTTACTGTTGTGAACGTCA+AGG + chr3.4:66316384-66316403 MS.gene05019:intron 45.0%
TAATGGCCGTAGGATTGAGT+TGG + chr3.4:66315777-66315796 MS.gene05019:CDS 45.0%
TCTGGATATTGGAAGGCAAC+TGG + chr3.4:66316691-66316710 MS.gene05019:CDS 45.0%
TTAGTCTCAGGTTCCATGAG+TGG + chr3.4:66318093-66318112 MS.gene05019:CDS 45.0%
! AGAGGCGTACTTAACGTTGT+AGG + chr3.4:66316340-66316359 MS.gene05019:intron 45.0%
! GAGGTGGTCTTGAAGAAGAT+AGG + chr3.4:66319661-66319680 MS.gene05019:CDS 45.0%
! TAGGTTTTCTTTGCCTCCCT+TGG + chr3.4:66318017-66318036 MS.gene05019:CDS 45.0%
! TGCCATATGATTTGCATGCC+TGG - chr3.4:66317175-66317194 None:intergenic 45.0%
!! CTTTGGCTCTTTGTACCATG+TGG + chr3.4:66319701-66319720 MS.gene05019:CDS 45.0%
!! TATAGAGGAAGAGCACCACA+TGG + chr3.4:66316775-66316794 MS.gene05019:CDS 45.0%
!! TCACGAGGGATGATGGAATT+TGG + chr3.4:66317337-66317356 MS.gene05019:CDS 45.0%
!! AATATTTAATAAATTAACAT+TGG + chr3.4:66318813-66318832 MS.gene05019:intron 5.0%
!! ATTAAATATTCAATATTATA+GGG - chr3.4:66318803-66318822 None:intergenic 5.0%
!! TATTAAATATTCAATATTAT+AGG - chr3.4:66318804-66318823 None:intergenic 5.0%
!!! TTTTTTAATAAAAATAGTAA+AGG + chr3.4:66317000-66317019 MS.gene05019:intron 5.0%
ACATGGATCTCGTACGGGTT+GGG + chr3.4:66316792-66316811 MS.gene05019:CDS 50.0%
AGCACCACATGGATCTCGTA+CGG + chr3.4:66316786-66316805 MS.gene05019:CDS 50.0%
CCTGGTTCAAACCTGCAAAC+CGG - chr3.4:66316866-66316885 None:intergenic 50.0%
GAATGTGACAATCCTTCCGC+CGG + chr3.4:66316844-66316863 MS.gene05019:CDS 50.0%
GCCTAATTACCCTCCATCCA+AGG + chr3.4:66317428-66317447 MS.gene05019:CDS 50.0%
GTGGAAGACTTCCCTCAAGT+TGG + chr3.4:66318042-66318061 MS.gene05019:CDS 50.0%
! ACAATGGTGGGAATGTCACG+AGG + chr3.4:66317322-66317341 MS.gene05019:CDS 50.0%
! CAATGGTGGGAATGTCACGA+GGG + chr3.4:66317323-66317342 MS.gene05019:CDS 50.0%
! GTTTTCTTTGCCTCCCTTGG+AGG + chr3.4:66318020-66318039 MS.gene05019:CDS 50.0%
AAGTCTTCCACCTCCAAGGG+AGG - chr3.4:66318033-66318052 None:intergenic 55.0%
AATTCTCAGACTCGCGCCGT+TGG + chr3.4:66316730-66316749 MS.gene05019:CDS 55.0%
AGGGAAGTCTTCCACCTCCA+AGG - chr3.4:66318037-66318056 None:intergenic 55.0%
CAACCCGTACGAGATCCATG+TGG - chr3.4:66316793-66316812 None:intergenic 55.0%
CAAGTTCTTCATCGGTGGGG+TGG - chr3.4:66315732-66315751 None:intergenic 55.0%
CACATGGATCTCGTACGGGT+TGG + chr3.4:66316791-66316810 MS.gene05019:CDS 55.0%
GCACCACATGGATCTCGTAC+GGG + chr3.4:66316787-66316806 MS.gene05019:CDS 55.0%
GCACCTGTTTCATTGCCTCC+TGG + chr3.4:66315697-66315716 MS.gene05019:CDS 55.0%
GGATGGAGGGTAATTAGGCG+TGG - chr3.4:66317427-66317446 None:intergenic 55.0%
GGCAACTGGGAAAGATCGCA+AGG + chr3.4:66316705-66316724 MS.gene05019:CDS 55.0%
GGGAAGTCTTCCACCTCCAA+GGG - chr3.4:66318036-66318055 None:intergenic 55.0%
GGGAATGTCACGAGGGATGA+TGG + chr3.4:66317330-66317349 MS.gene05019:CDS 55.0%
GGGTGGAACCTAAATCCAGG+AGG - chr3.4:66315715-66315734 None:intergenic 55.0%
GGTTCAAACCTGCAAACCGG+CGG - chr3.4:66316863-66316882 None:intergenic 55.0%
GTGGGGTGGAACCTAAATCC+AGG - chr3.4:66315718-66315737 None:intergenic 55.0%
TGGGATGTGCTTGGATCCCA+TGG - chr3.4:66317273-66317292 None:intergenic 55.0%
TGTGAACCATGGGACTTGCC+AGG + chr3.4:66315829-66315848 MS.gene05019:CDS 55.0%
TTCTTTGCCTCCCTTGGAGG+TGG + chr3.4:66318023-66318042 MS.gene05019:CDS 55.0%
! CCGGTTTGCAGGTTTGAACC+AGG + chr3.4:66316863-66316882 MS.gene05019:intron 55.0%
CAAACCTGCAAACCGGCGGA+AGG - chr3.4:66316859-66316878 None:intergenic 60.0%
!! CAATCCTTCCGCCGGTTTGC+AGG + chr3.4:66316852-66316871 MS.gene05019:CDS 60.0%


Chromosome Type Strat End Strand Name
chr3.4 gene 66315694 66319750 66315694 ID=MS.gene05019
chr3.4 mRNA 66315694 66319750 66315694 ID=MS.gene05019.t1;Parent=MS.gene05019
chr3.4 exon 66315694 66315850 66315694 ID=MS.gene05019.t1.exon1;Parent=MS.gene05019.t1
chr3.4 CDS 66315694 66315850 66315694 ID=cds.MS.gene05019.t1;Parent=MS.gene05019.t1
chr3.4 exon 66316593 66316873 66316593 ID=MS.gene05019.t1.exon2;Parent=MS.gene05019.t1
chr3.4 CDS 66316593 66316873 66316593 ID=cds.MS.gene05019.t1;Parent=MS.gene05019.t1
chr3.4 exon 66317090 66317449 66317090 ID=MS.gene05019.t1.exon3;Parent=MS.gene05019.t1
chr3.4 CDS 66317090 66317449 66317090 ID=cds.MS.gene05019.t1;Parent=MS.gene05019.t1
chr3.4 exon 66317982 66318443 66317982 ID=MS.gene05019.t1.exon4;Parent=MS.gene05019.t1
chr3.4 CDS 66317982 66318443 66317982 ID=cds.MS.gene05019.t1;Parent=MS.gene05019.t1
chr3.4 exon 66318867 66318951 66318867 ID=MS.gene05019.t1.exon5;Parent=MS.gene05019.t1
chr3.4 CDS 66318867 66318951 66318867 ID=cds.MS.gene05019.t1;Parent=MS.gene05019.t1
chr3.4 exon 66319074 66319750 66319074 ID=MS.gene05019.t1.exon6;Parent=MS.gene05019.t1
chr3.4 CDS 66319074 66319750 66319074 ID=cds.MS.gene05019.t1;Parent=MS.gene05019.t1
Gene Sequence

>MS.gene05019

ATGGCACCTGTTTCATTGCCTCCTGGATTTAGGTTCCACCCCACCGATGAAGAACTTGTTTCTTATTACCTCAAAAGAAAGATTAATGGCCGTAGGATTGAGTTGGAGATCATCCCTGAAGTTGATCTCTACAAGTGTGAACCATGGGACTTGCCAGGTATAATAATATTACATTCAAACATATATATGACATGAGTTTAATTTTTATGATTGTCAATTATTTCTATTTTATTTTTTTGATATTTTCAAACAAAATATCAAAATATTTTTAATGATTTATAAAAAGTGACATTGTGTAACATCTTTCATCAATACATGCACACAAAAATAGAGGTTTCAAAATTCATTTATTGACTTGAGTTTTGAACATTGACTAAAGAAAATTTTATAACAAGAAGAGGCCTTGAGATTAAAAGATCAACCTCTTATTTTGTTATGATTGACAAAATCATTATTGGTTAATGTGGCTTGCAATATTCAGAAGTGCTTTTAACAATAAAAACAAATTAAAAGAATCTTAAAAAAGTGAAGGCACATTTCTTTAGACACGATTTTGCTTCTAATCATCTTTATTCTTCAATATACGAAACACATGCTTGCTTTATTGGTCAAGTATATTTTTTTTGCACTTTGGCATAAAATATTTAGAGGCGTACTTAACGTTGTAGGGAGAATGGTCCTTCAAAATAGGGTTACTGTTGTGAACGTCAAGGTACATAGTAATGAGGAAATAGTTGGATTCCCAACTCAAAAACAGTCAACAAAAGGAAAGGATCACATATTAAAGAAGATTTCTTAATTTTCAGCCTTTCAAAACAGGCAAATATATAACTAGGTCGAGGTGTTTCTAAAAAGTGTTATGATTTTAACGCATTGTTATTATTATGACATGATTATAGGGAAGTCATTGCTACCGGGAAAAGATTTGGAATGGTATTTTTTCAGCCCTAGGGATAGGAAGTATCCAAATGGGTCAAGAACCAATAGAGCAACAAAATCTGGATATTGGAAGGCAACTGGGAAAGATCGCAAGGTGAATTCTCAGACTCGCGCCGTTGGAATGAAGAAAACCCTAGTTTACTATAGAGGAAGAGCACCACATGGATCTCGTACGGGTTGGGTTATGCATGAGTATCGTCTTGATGAAAGAGAATGTGACAATCCTTCCGCCGGTTTGCAGGTTTGAACCAGGAACCTCTAACTTTATTACTAACTAGTATATGATTGTTTAATATGGATCGGTCCAACGGTAGACTCTATTATTTTTAGTAAATTTAATAAGAAATTTTGAGAGGAATAAAATTATTTTTTTAATAAAAATAGTAAAGGTCCACCTATTGAACATTTTTTATTATAGATAATAAAATGTTTGATTGAAATTTTTTTGTGATTTCAGGATGCATATGCTCTTTGCCGTATATTCAAGAAGAGTACAGTGATTGCTCCAAAAGTTGGGGAGCAATATGTTAATAATGTGACCAGGCATGCAAATCATATGGCAAGTGATCAATCATCAAGCATTGAGTTGTACTCTGAAGGAAGAGATGAAGCTATAGGAAGCTCAAGTTATTTGATGCCATGGGATCCAAGCACATCCCAAAACATGAATGGGACTAATACTCTCAATAACAATGGTGGGAATGTCACGAGGGATGATGGAATTTGGACACAATTTTTATCAGAAGACTTGCTCAGTCTTCCAATATCTTCATCATTTCCCAATTATGGATCCACGCCTAATTACCCTCCATCCAAGGTACTACTAGTTAATTTCTTTTACACCAAAACTTAATTAAATAGGCCATTTGTTACAGATTTTTGGTGAAAAATAAAATCACTTTTATCAGTTTTTTTTTTTTTGACAAAGCTTTTACGATTTTTTATTTTTATGTGATTATTGTACGGATTTAAAAAAAATAAGAATCTGAAGAAAAAAAAATATAAAAAGCTCCAAATAAAAAGTTGTTTAGAGGAGTTTCTCTTGAAAATCATTTTGGATAGATATTTTAGAATAAATTTGAATCATTATGATAAGAAATACAAAATACCTTATTGTTTTTTAAATCTGTAAACTATTGAATATTATAATGATATTTTTTACTATTTTTTTTTTATAATTTGTAATAAACACATGTTATAAATTAACCTTTACCTTTTAAATTTTGGTCCGTACAATAATAAAGATTTTAAAGCCTCCACAATGTAAAATCATTCTAGATTCAATGTCATTACAATTTCCTATAATTTATTTGGTCATGAATTTTTAAAAAATTCTTAATTATTTGCAGGTGGATATAGCACTAGAGTGTGCAAGGATGCAACATAGGTTTTCTTTGCCTCCCTTGGAGGTGGAAGACTTCCCTCAAGTTGGTATGAATTCTGAGCTGAAGATGACACAATTAGTCTCAGGTTCCATGAGTGGAACTAGAAATGAAACAGATATCTTGCAGGAAATTCTATCTGTAGCTCAAGCTTCTCAAGAATTGATAAACCAATCAAACTACTCACATGCATTTGGTGGCAATGAAAATTATGCTACTGATCATGAAAATGATTTTACTTTTATGGTTGGAAATAATTACAATCATGTGACTGATCATATGAATTCCATGAGATATATTGATGACAAAGCATGGGAAGATCCAAACACAAGATCAATTGAAATTGGGGATCTTGATAATGAATTCAAGGCTGAAAGGATGGTAGAGAATTTAAGATGGGTTGGAATGTCAAGCAATGATTTAGAGAAGGTATGCTAGCTATATTGCTAATATTTAAATTTAAAGTGTCATCTAAGTACTAATTTAAGATAAGATCTTATATGTCAATCATAGAAATCCACCATATGTAGGCTATCTTTTGGTATATTATAAAGTCCCAAAAATGGATTTTAAAAATGCGACATCAAGTATACCCTAGAATTTTATTAAGTATACTACCTAACATCCAATCATTTGATGTCACATGTACTCTTTAATATTTAATTATTTTCAAGTGAATAATTTAATTTTTTTGTTGTTGTTAATGTTATCTTTTGAGTATTGGTATCTTTATTATTCTTATGAGTACTATCAAGGAATTCTTCTTTTGAAATTGCTAGCCTAGGCCCTATAATATTGAATATTTAATAAATTAACATTGGACTTTATATGGTTATTTGAATAATTTTACAGAGTTTTATGGAAGAGCATCAAAAGGTTGTTCCAATTGAGGAAATTTCAAGCTTCAAAACAAAGAGGAAAGAGAATGAGGTGCAAGGTATTATTATTAATTAAAAATTAAATGCATGATTTATTTTTGTAATTGACCTTGGATTTTTTTTAACTTACTATTTATTTTTATAAACCAAATTGACTAACAATAGCTTTTGTACTTTACAGTAGAATCTGAGCAACCAAATATCAACAAAGAAGTCAATGATGCTAACATTGATAATTTCTCAATAGGGTTTATCAATGATAATGACCCTAATGAGAATTTTATAGATGATGGTAACATTGATTATTCAAATTCTACAAGCTATGAAGTTGTTGAGGAAACAACAAAAGTTAGTCATGGAATGTTTGTTGCTACACGCCAAGTAGCAGACACGTTCTTTCACCAAATAACACCTTCACAAACAATCAAAGTTCAACTCAATCCAATTCTGGAAAATAAAAAATCTATAGAGAATGCAGAGACAATGATTATACCAAAGAATCAAGGATACTCTCTCTTAAGGAAGTTTAAGGCTAATTTGATGAAGTACATGAAAAATCCATCAAAGATAATAGCAAGTGCAATTGTGTTCATATTTGCACTTTTTTTGGTGCTTTGTGTTTATTTGAAGGAGCAAGTGGAAGATATGAAACCAAAGTCAGAATATGTGAAAAGGAAATATAGCTATGGAGCTAATAGCATGAAGAAAATCATTTGGAATGAGCAAGAGAAAATTTGGTTTGTTGGTATCAAAAGTGGTAAAGGTTTTGAGGTGGTCTTGAAGAAGATAGGAATTTTCCTAACCATATCTTTGGCTCTTTGTACCATGTGGGCTAACCATATGATAGTTTGTTATTGA
Protein sequence

>MS.gene05019.t1

MAPVSLPPGFRFHPTDEELVSYYLKRKINGRRIELEIIPEVDLYKCEPWDLPGKSLLPGKDLEWYFFSPRDRKYPNGSRTNRATKSGYWKATGKDRKVNSQTRAVGMKKTLVYYRGRAPHGSRTGWVMHEYRLDERECDNPSAGLQDAYALCRIFKKSTVIAPKVGEQYVNNVTRHANHMASDQSSSIELYSEGRDEAIGSSSYLMPWDPSTSQNMNGTNTLNNNGGNVTRDDGIWTQFLSEDLLSLPISSSFPNYGSTPNYPPSKVDIALECARMQHRFSLPPLEVEDFPQVGMNSELKMTQLVSGSMSGTRNETDILQEILSVAQASQELINQSNYSHAFGGNENYATDHENDFTFMVGNNYNHVTDHMNSMRYIDDKAWEDPNTRSIEIGDLDNEFKAERMVENLRWVGMSSNDLEKSFMEEHQKVVPIEEISSFKTKRKENEVQVESEQPNINKEVNDANIDNFSIGFINDNDPNENFIDDGNIDYSNSTSYEVVEETTKVSHGMFVATRQVADTFFHQITPSQTIKVQLNPILENKKSIENAETMIIPKNQGYSLLRKFKANLMKYMKNPSKIIASAIVFIFALFLVLCVYLKEQVEDMKPKSEYVKRKYSYGANSMKKIIWNEQEKIWFVGIKSGKGFEVVLKKIGIFLTISLALCTMWANHMIVCY