AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene050232

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene050232.t1 MTR_7g450950 79.456 331 59 1 1 322 8 338 0.0 545
MS.gene050232.t1 MTR_7g451170 43.466 352 155 8 7 321 34 378 2.21e-76 240
MS.gene050232.t1 MTR_7g037260 41.768 328 147 9 26 313 8 331 3.29e-71 225
MS.gene050232.t1 MTR_7g037130 41.141 333 150 10 22 313 4 331 4.53e-68 217
MS.gene050232.t1 MTR_7g035350 34.644 407 173 8 6 321 29 433 1.24e-64 211
MS.gene050232.t1 MTR_4g088015 43.144 299 141 6 6 279 63 357 2.37e-64 209
MS.gene050232.t1 MTR_1g057980 46.154 221 110 4 54 274 1 212 1.91e-55 182
MS.gene050232.t1 MTR_3g077650 60.294 136 52 1 131 266 171 304 1.11e-48 169
MS.gene050232.t1 MTR_4g105660 57.353 136 56 2 135 270 174 307 3.60e-45 159
MS.gene050232.t1 MTR_3g463400 53.030 132 59 1 140 268 132 263 7.09e-43 153
MS.gene050232.t1 MTR_5g049190 51.799 139 62 1 137 275 15 148 1.05e-42 147
MS.gene050232.t1 MTR_5g070020 50.769 130 59 1 140 264 121 250 1.85e-41 147
MS.gene050232.t1 MTR_7g061330 53.774 106 46 1 140 245 112 214 2.98e-31 123
MS.gene050232.t1 MTR_7g461410 53.774 106 46 1 140 245 112 214 2.98e-31 123
MS.gene050232.t1 MTR_7g061330 53.774 106 46 1 140 245 76 178 3.39e-31 123
MS.gene050232.t1 MTR_1g026870 51.402 107 51 1 140 245 84 190 3.45e-31 124
MS.gene050232.t1 MTR_3g110028 53.271 107 49 1 140 245 84 190 4.98e-31 123
MS.gene050232.t1 MTR_4g019370 49.000 100 51 0 140 239 37 136 6.33e-31 119
MS.gene050232.t1 MTR_3g101290 45.918 98 53 0 140 237 36 133 4.34e-29 111
MS.gene050232.t1 MTR_5g010650 51.042 96 47 0 140 235 109 204 9.05e-29 115
MS.gene050232.t1 MTR_5g082910 47.959 98 51 0 140 237 18 115 2.37e-27 108
MS.gene050232.t1 MTR_4g094982 45.714 105 56 1 140 243 4 108 2.72e-26 105
MS.gene050232.t1 MTR_5g041570 41.667 120 66 1 141 260 134 249 1.17e-25 106
MS.gene050232.t1 MTR_7g035300 44.928 138 63 3 109 246 45 169 1.73e-25 102
MS.gene050232.t1 MTR_4g082040 34.395 157 98 2 111 266 74 226 3.26e-25 105
MS.gene050232.t1 MTR_5g016510 44.860 107 58 1 140 245 4 110 4.78e-25 103
MS.gene050232.t1 MTR_0008s0470 35.659 129 80 2 135 260 9 137 7.32e-25 102
MS.gene050232.t1 MTR_6g027340 36.970 165 96 3 127 283 2 166 1.16e-24 99.4
MS.gene050232.t1 MTR_2g064160 41.509 106 60 2 141 244 13 118 1.75e-24 101
MS.gene050232.t1 MTR_0008s0390 42.308 104 57 2 141 241 15 118 4.31e-24 99.4
MS.gene050232.t1 MTR_4g100720 41.964 112 64 1 141 251 15 126 1.60e-23 95.5
MS.gene050232.t1 MTR_3g052450 43.299 97 54 1 141 236 42 138 1.67e-23 101
MS.gene050232.t1 MTR_3g097450 44.144 111 56 3 138 244 11 119 1.75e-23 98.2
MS.gene050232.t1 MTR_1g062940 44.211 95 52 1 141 234 8 102 1.87e-23 96.7
MS.gene050232.t1 MTR_6g074860 43.750 96 54 0 141 236 4 99 1.98e-23 97.1
MS.gene050232.t1 MTR_0251s0050 41.121 107 59 2 141 246 15 118 3.80e-23 97.1
MS.gene050232.t1 MTR_6g015455 42.857 98 56 0 140 237 4 101 4.90e-23 100
MS.gene050232.t1 MTR_4g102380 44.330 97 53 1 141 236 14 110 5.81e-23 96.3
MS.gene050232.t1 MTR_1g112760 32.609 138 87 3 141 277 15 147 7.32e-23 95.1
MS.gene050232.t1 MTR_6g027370 38.760 129 76 1 130 258 88 213 8.73e-23 97.4
MS.gene050232.t1 MTR_2g089450 39.823 113 64 2 141 252 14 123 8.85e-23 95.5
MS.gene050232.t1 MTR_3g011610 35.075 134 85 2 114 245 12 145 9.10e-23 99.0
MS.gene050232.t1 MTR_4g063100 38.938 113 66 2 141 252 9 119 9.29e-23 95.5
MS.gene050232.t1 MTR_2g089420 38.739 111 66 2 141 249 13 123 9.92e-23 98.2
MS.gene050232.t1 MTR_3g052430 42.268 97 55 1 141 236 43 139 1.09e-22 98.6
MS.gene050232.t1 MTR_8g095390 41.284 109 62 2 138 244 11 119 1.38e-22 96.3
MS.gene050232.t1 MTR_3g089045 45.133 113 59 1 141 250 16 128 1.52e-22 95.9
MS.gene050232.t1 MTR_6g027360 38.636 132 77 1 121 248 58 189 1.99e-22 95.5
MS.gene050232.t1 MTR_3g077110 38.182 110 62 3 141 248 14 119 2.43e-22 96.3
MS.gene050232.t1 MTR_5g078140 44.762 105 54 3 141 242 14 117 2.45e-22 95.5
MS.gene050232.t1 MTR_3g065440 44.762 105 54 3 141 242 14 117 3.24e-22 95.1
MS.gene050232.t1 MTR_4g073420 40.000 130 57 3 137 263 10 121 3.49e-22 94.7
MS.gene050232.t1 MTR_1g086530 29.612 206 114 5 141 321 35 234 3.68e-22 94.4
MS.gene050232.t1 MTR_5g029840 38.793 116 70 1 141 255 14 129 4.77e-22 95.1
MS.gene050232.t1 MTR_8g020490 43.299 97 54 1 141 236 10 106 5.95e-22 93.2
MS.gene050232.t1 MTR_4g091490 38.333 120 73 1 141 259 15 134 7.34e-22 94.7
MS.gene050232.t1 MTR_8g027345 44.444 99 50 2 141 236 14 110 1.10e-21 93.6
MS.gene050232.t1 MTR_5g062790 41.667 108 61 2 139 244 9 116 1.13e-21 93.6
MS.gene050232.t1 MTR_8g017440 36.000 100 63 1 141 239 14 113 1.14e-21 94.0
MS.gene050232.t1 MTR_1g045610 37.795 127 69 3 141 260 23 146 1.29e-21 92.4
MS.gene050232.t1 MTR_5g088640 40.000 125 72 3 137 258 10 134 1.46e-21 92.8
MS.gene050232.t1 MTR_5g088080 41.667 108 61 2 137 242 10 117 1.47e-21 92.4
MS.gene050232.t1 MTR_5g088150 41.667 108 61 2 137 242 10 117 1.47e-21 92.4
MS.gene050232.t1 MTR_5g488210 41.667 108 61 2 137 242 10 117 1.47e-21 92.4
MS.gene050232.t1 MTR_7g076740 43.396 106 57 3 141 243 14 119 1.47e-21 93.2
MS.gene050232.t1 MTR_2g097910 38.261 115 67 2 141 254 22 133 1.51e-21 93.6
MS.gene050232.t1 MTR_1g073170 40.000 95 56 1 141 234 22 116 1.71e-21 92.0
MS.gene050232.t1 MTR_2g096380 41.000 100 58 1 141 239 8 107 1.74e-21 91.7
MS.gene050232.t1 MTR_2g089620 41.667 108 60 2 141 245 14 121 1.82e-21 93.2
MS.gene050232.t1 MTR_1g021230 45.833 96 51 1 141 235 59 154 1.96e-21 94.7
MS.gene050232.t1 MTR_4g105130 33.333 126 80 2 141 265 14 136 2.05e-21 93.6
MS.gene050232.t1 MTR_8g042410 43.299 97 54 1 141 236 39 135 2.12e-21 95.1
MS.gene050232.t1 MTR_8g031360 44.444 99 51 3 141 236 15 112 2.54e-21 92.4
MS.gene050232.t1 MTR_8g017540 36.000 100 63 1 141 239 60 159 2.61e-21 94.0
MS.gene050232.t1 MTR_2g011660 40.566 106 62 1 141 245 15 120 2.78e-21 93.2
MS.gene050232.t1 MTR_1g086510 38.655 119 67 2 117 234 4 117 2.79e-21 91.7
MS.gene050232.t1 MTR_5g010020 41.237 97 56 1 141 236 14 110 2.85e-21 92.8
MS.gene050232.t1 MTR_5g488170 42.056 107 60 2 137 241 10 116 2.90e-21 91.3
MS.gene050232.t1 MTR_7g117730 42.424 99 52 2 141 236 14 110 3.52e-21 91.3
MS.gene050232.t1 MTR_5g007370 40.741 108 60 2 141 247 14 118 4.41e-21 91.7
MS.gene050232.t1 MTR_4g478180 43.299 97 54 1 141 236 15 111 4.73e-21 92.4
MS.gene050232.t1 MTR_1g100653 36.885 122 71 3 141 258 14 133 4.92e-21 91.7
MS.gene050232.t1 MTR_4g125520 37.607 117 71 2 141 255 14 130 5.05e-21 91.7
MS.gene050232.t1 MTR_7g086960 45.833 96 52 0 141 236 89 184 5.67e-21 92.4
MS.gene050232.t1 MTR_3g028740 41.121 107 59 2 141 246 24 127 6.03e-21 92.0
MS.gene050232.t1 MTR_7g035075 44.211 95 52 1 141 234 16 110 6.56e-21 89.4
MS.gene050232.t1 MTR_2g099740 36.792 106 63 2 141 245 14 116 8.27e-21 92.4
MS.gene050232.t1 MTR_7g096930 33.333 147 93 2 141 284 14 158 9.86e-21 90.5
MS.gene050232.t1 MTR_1g110460 40.000 95 56 1 141 234 28 122 1.18e-20 90.9
MS.gene050232.t1 MTR_5g038910 38.793 116 69 1 121 236 8 121 1.26e-20 91.7
MS.gene050232.t1 MTR_8g006470 40.566 106 61 2 138 241 9 114 1.35e-20 90.1
MS.gene050232.t1 MTR_5g038910 38.793 116 69 1 121 236 8 121 1.51e-20 92.0
MS.gene050232.t1 MTR_4g065017 38.261 115 67 2 141 254 19 130 1.53e-20 90.9
MS.gene050232.t1 MTR_8g017500 36.634 101 61 2 141 239 14 113 1.61e-20 90.9
MS.gene050232.t1 MTR_1g043050 40.000 120 65 3 141 255 14 131 1.70e-20 89.4
MS.gene050232.t1 MTR_3g074520 33.108 148 96 2 141 287 14 159 2.57e-20 90.5
MS.gene050232.t1 MTR_8g017350 38.318 107 61 3 141 245 14 117 2.83e-20 91.7
MS.gene050232.t1 MTR_8g098860 39.175 97 58 1 141 236 14 110 3.06e-20 89.7
MS.gene050232.t1 MTR_8g017340 38.318 107 61 3 141 245 14 117 3.66e-20 91.3
MS.gene050232.t1 MTR_5g079670 37.736 106 65 1 141 245 13 118 4.50e-20 87.0
MS.gene050232.t1 MTR_6g006030 43.158 95 53 1 141 234 16 110 4.92e-20 87.0
MS.gene050232.t1 MTR_7g115650 40.816 98 53 2 141 235 14 109 5.16e-20 87.0
MS.gene050232.t1 MTR_7g110830 37.615 109 64 2 141 248 14 119 5.23e-20 89.7
MS.gene050232.t1 MTR_1g085640 35.780 109 66 2 141 248 14 119 7.31e-20 89.7
MS.gene050232.t1 MTR_1g085040 35.185 108 66 2 141 247 14 118 9.63e-20 89.0
MS.gene050232.t1 MTR_5g088610 41.509 106 60 2 139 242 9 114 1.15e-19 88.6
MS.gene050232.t1 MTR_3g461490 35.965 114 65 2 141 253 14 120 1.32e-19 88.2
MS.gene050232.t1 MTR_8g017390 35.514 107 64 3 141 245 14 117 1.32e-19 89.4
MS.gene050232.t1 MTR_6g009430 35.455 110 70 1 137 245 10 119 1.60e-19 88.2
MS.gene050232.t1 MTR_0063s0090 41.121 107 59 3 141 244 14 119 2.43e-19 85.5
MS.gene050232.t1 MTR_4g029540 37.500 104 63 2 141 242 12 115 4.45e-19 86.3
MS.gene050232.t1 MTR_4g082290 37.736 106 65 1 141 245 14 119 4.59e-19 87.4
MS.gene050232.t1 MTR_1g017000 38.776 98 58 2 141 236 14 111 4.60e-19 85.5
MS.gene050232.t1 MTR_7g111290 38.542 96 58 1 141 235 14 109 5.72e-19 87.0
MS.gene050232.t1 MTR_1g043080 40.404 99 54 2 141 236 14 110 5.91e-19 85.1
MS.gene050232.t1 MTR_4g485530 39.000 100 60 1 141 239 14 113 6.05e-19 83.6
MS.gene050232.t1 MTR_2g034790 39.216 102 57 2 141 239 14 113 7.47e-19 85.9
MS.gene050232.t1 MTR_5g042030 42.708 96 54 1 141 235 9 104 7.68e-19 85.5
MS.gene050232.t1 MTR_7g011170 37.736 106 65 1 141 245 14 119 1.30e-18 85.1
MS.gene050232.t1 MTR_2g088170 44.660 103 52 2 137 236 27 127 1.31e-18 86.3
MS.gene050232.t1 MTR_4g121460 36.441 118 69 3 141 254 14 129 1.77e-18 85.1
MS.gene050232.t1 MTR_4g082230 36.792 106 66 1 141 245 14 119 2.03e-18 85.5
MS.gene050232.t1 MTR_7g010210 39.474 114 63 3 141 253 14 122 2.16e-18 84.0
MS.gene050232.t1 MTR_8g468380 39.130 115 69 1 122 236 4 117 2.19e-18 85.5
MS.gene050232.t1 MTR_7g010210 39.474 114 63 3 141 253 14 122 2.27e-18 84.7
MS.gene050232.t1 MTR_4g097570 34.146 123 78 2 141 260 14 136 2.76e-18 84.0
MS.gene050232.t1 MTR_7g017260 39.394 99 57 1 141 236 27 125 3.41e-18 83.2
MS.gene050232.t1 MTR_0197s0010 41.053 95 53 2 144 236 6 99 3.46e-18 82.4
MS.gene050232.t1 MTR_0008s0280 36.364 99 62 1 139 236 12 110 3.51e-18 82.4
MS.gene050232.t1 MTR_3g083540 36.364 99 58 2 141 236 43 139 4.08e-18 83.6
MS.gene050232.t1 MTR_3g039990 36.220 127 76 3 141 266 15 137 5.15e-18 83.6
MS.gene050232.t1 MTR_1g076150 35.772 123 71 4 141 261 14 130 5.54e-18 82.4
MS.gene050232.t1 MTR_0140s0030 37.168 113 67 2 141 252 15 124 6.87e-18 83.2
MS.gene050232.t1 MTR_0489s0020 37.168 113 67 2 141 252 15 124 6.87e-18 83.2
MS.gene050232.t1 MTR_5g014990 37.719 114 67 3 141 250 14 127 8.04e-18 82.8
MS.gene050232.t1 MTR_4g097570 34.426 122 78 2 141 260 14 135 1.12e-17 82.0
MS.gene050232.t1 MTR_2g067420 39.175 97 58 1 141 236 16 112 2.26e-17 81.6
MS.gene050232.t1 MTR_1g017140 39.091 110 62 3 141 248 14 120 2.41e-17 82.0
MS.gene050232.t1 MTR_4g128190 39.623 106 51 3 141 245 13 106 2.43e-17 80.1
MS.gene050232.t1 MTR_8g060940 38.947 95 57 1 141 234 9 103 2.92e-17 80.1
MS.gene050232.t1 MTR_1g083630 39.000 100 60 1 141 239 14 113 3.27e-17 82.8
MS.gene050232.t1 MTR_6g055910 34.513 113 73 1 141 252 16 128 3.70e-17 80.5
MS.gene050232.t1 MTR_1g100667 34.454 119 76 2 134 251 9 126 4.20e-17 80.1
MS.gene050232.t1 MTR_4g128670 39.796 98 57 2 141 236 14 111 4.25e-17 81.3
MS.gene050232.t1 MTR_2g095520 31.343 134 84 3 141 272 14 141 5.12e-17 80.5
MS.gene050232.t1 MTR_7g087130 39.175 97 58 1 141 236 14 110 5.26e-17 80.9
MS.gene050232.t1 MTR_3g103570 38.525 122 71 4 141 259 14 134 5.27e-17 80.9
MS.gene050232.t1 MTR_6g090405 37.391 115 65 3 141 252 14 124 6.22e-17 79.3
MS.gene050232.t1 MTR_6g012180 38.144 97 59 1 141 236 14 110 9.40e-17 79.7
MS.gene050232.t1 MTR_1g008970 42.202 109 55 2 164 264 113 221 9.49e-17 79.0
MS.gene050232.t1 MTR_6g012690 36.792 106 66 1 141 245 14 119 1.03e-16 80.1
MS.gene050232.t1 MTR_5g079120 30.864 162 101 3 108 258 21 182 1.08e-16 79.7
MS.gene050232.t1 MTR_2g033170 37.383 107 66 1 141 246 26 132 1.23e-16 79.7
MS.gene050232.t1 MTR_5g079290 37.000 100 62 1 141 239 19 118 1.65e-16 78.6
MS.gene050232.t1 MTR_5g078910 37.000 100 62 1 141 239 9 108 2.04e-16 78.6
MS.gene050232.t1 MTR_0247s0040 37.000 100 62 1 141 239 9 108 2.06e-16 76.3
MS.gene050232.t1 MTR_0001s0360 37.113 97 60 1 141 236 9 105 2.07e-16 77.8
MS.gene050232.t1 MTR_5g078950 35.000 100 64 1 141 239 9 108 2.43e-16 77.8
MS.gene050232.t1 MTR_4g123040 37.383 107 66 1 141 246 26 132 2.44e-16 78.6
MS.gene050232.t1 MTR_4g057635 37.838 111 64 3 137 245 10 117 2.82e-16 78.6
MS.gene050232.t1 MTR_7g109320 43.434 99 51 2 141 236 14 110 1.04e-15 77.4
MS.gene050232.t1 MTR_7g061550 33.663 101 64 1 141 238 7 107 1.69e-15 76.6
MS.gene050232.t1 MTR_5g078930 34.188 117 75 2 141 255 11 127 2.52e-15 74.3
MS.gene050232.t1 MTR_5g079220 36.000 100 63 1 141 239 23 122 3.64e-15 74.7
MS.gene050232.t1 MTR_5g078860 37.000 100 62 1 141 239 9 108 4.04e-15 75.1
MS.gene050232.t1 MTR_0193s0090 35.000 100 64 1 141 239 9 108 6.18e-15 72.8
MS.gene050232.t1 MTR_4g063100 36.364 88 52 2 167 252 5 90 9.38e-15 72.8
MS.gene050232.t1 MTR_6g055910 37.975 79 49 0 174 252 21 99 1.11e-14 73.2
MS.gene050232.t1 MTR_5g078800 35.000 100 64 1 141 239 9 108 1.13e-14 73.2
MS.gene050232.t1 MTR_7g102110 34.694 98 62 2 141 236 14 111 1.20e-14 73.2
MS.gene050232.t1 MTR_7g111290 45.161 62 34 0 174 235 6 67 1.47e-14 73.9
MS.gene050232.t1 MTR_6g080360 36.538 104 64 2 140 242 478 580 4.34e-14 73.6
MS.gene050232.t1 MTR_6g080360 36.538 104 64 2 140 242 258 360 5.99e-14 73.2
MS.gene050232.t1 MTR_2g096380 39.394 66 40 0 174 239 23 88 3.15e-13 68.2
MS.gene050232.t1 MTR_1g085880 37.755 98 59 2 144 239 17 114 1.76e-12 65.5
MS.gene050232.t1 MTR_1g085770 37.755 98 59 2 144 239 17 114 5.25e-12 65.9
MS.gene050232.t1 MTR_3g045430 29.268 123 86 1 141 262 15 137 8.96e-12 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene050232.t1 AT4G18770 59.398 133 52 1 134 266 210 340 3.09e-49 170
MS.gene050232.t1 AT5G40360 44.624 186 94 2 83 268 109 285 1.80e-45 158
MS.gene050232.t1 AT3G27785 49.419 172 76 4 100 266 151 316 2.84e-45 159
MS.gene050232.t1 AT5G58850 50.725 138 57 1 140 266 104 241 1.31e-41 150
MS.gene050232.t1 AT5G11050 50.000 140 57 1 140 266 104 243 3.53e-41 148
MS.gene050232.t1 AT2G25230 43.919 148 81 1 121 268 6 151 5.26e-35 127
MS.gene050232.t1 AT5G40430 39.157 166 89 3 135 300 48 201 8.30e-34 125
MS.gene050232.t1 AT5G11510 52.336 107 50 1 140 245 80 186 5.45e-32 126
MS.gene050232.t1 AT5G11510 52.336 107 50 1 140 245 80 186 5.87e-32 126
MS.gene050232.t1 AT5G11510 52.336 107 50 1 140 245 80 186 5.87e-32 126
MS.gene050232.t1 AT5G11510 52.336 107 50 1 140 245 80 186 5.87e-32 126
MS.gene050232.t1 AT5G11510 52.336 107 50 1 140 245 80 186 6.62e-32 126
MS.gene050232.t1 AT5G02320 53.774 106 46 1 140 245 66 168 8.05e-32 124
MS.gene050232.t1 AT5G02320 53.774 106 46 1 140 245 126 228 9.71e-32 124
MS.gene050232.t1 AT5G02320 53.774 106 46 1 140 245 126 228 9.71e-32 124
MS.gene050232.t1 AT3G09370 55.238 105 44 1 140 244 129 230 1.56e-31 124
MS.gene050232.t1 AT3G09370 55.238 105 44 1 140 244 134 235 1.63e-31 124
MS.gene050232.t1 AT3G09370 55.238 105 44 1 140 244 142 243 2.49e-31 123
MS.gene050232.t1 AT4G32730 51.429 105 50 1 140 243 86 190 1.31e-29 119
MS.gene050232.t1 AT4G32730 51.429 105 50 1 140 243 86 190 1.31e-29 119
MS.gene050232.t1 AT4G32730 51.429 105 50 1 140 243 86 190 1.31e-29 119
MS.gene050232.t1 AT4G32730 51.429 105 50 1 140 243 86 190 1.31e-29 119
MS.gene050232.t1 AT4G32730 51.429 105 50 1 140 243 86 190 1.69e-29 119
MS.gene050232.t1 AT3G55730 46.154 104 56 0 136 239 51 154 1.16e-28 114
MS.gene050232.t1 AT3G09230 48.000 100 52 0 140 239 54 153 1.25e-27 111
MS.gene050232.t1 AT4G00540 49.123 114 52 2 141 251 103 213 9.51e-27 109
MS.gene050232.t1 AT4G00540 36.792 106 58 2 138 234 43 148 5.69e-13 69.3
MS.gene050232.t1 AT4G00540 49.123 114 52 2 141 251 101 211 1.96e-26 108
MS.gene050232.t1 AT4G00540 36.792 106 58 2 138 234 41 146 8.25e-13 69.3
MS.gene050232.t1 AT3G12720 39.167 120 70 2 141 257 24 143 4.72e-25 102
MS.gene050232.t1 AT3G29020 40.870 115 65 1 141 255 65 176 5.18e-25 101
MS.gene050232.t1 AT1G69560 39.496 119 69 1 141 259 107 222 7.11e-25 102
MS.gene050232.t1 AT1G69560 39.496 119 69 1 141 259 123 238 7.50e-25 103
MS.gene050232.t1 AT4G37260 45.918 98 53 0 140 237 12 109 8.41e-25 102
MS.gene050232.t1 AT1G26780 42.857 119 64 2 141 259 98 212 1.12e-24 101
MS.gene050232.t1 AT3G53200 41.860 129 65 4 141 262 11 136 1.25e-24 100
MS.gene050232.t1 AT2G39880 41.000 100 59 0 140 239 49 148 1.51e-24 102
MS.gene050232.t1 AT3G29020 40.870 115 65 1 141 255 67 178 1.53e-24 101
MS.gene050232.t1 AT1G26780 42.857 119 64 2 141 259 98 212 2.29e-24 102
MS.gene050232.t1 AT5G67300 42.857 98 56 0 140 237 5 102 3.20e-24 100
MS.gene050232.t1 AT4G33450 45.833 96 52 0 141 236 19 114 5.71e-24 98.6
MS.gene050232.t1 AT3G46130 39.130 115 66 2 141 254 11 122 6.63e-24 98.6
MS.gene050232.t1 AT3G11440 42.708 96 54 1 141 235 43 138 6.95e-24 102
MS.gene050232.t1 AT5G59780 38.261 115 67 2 141 254 10 121 8.68e-24 97.8
MS.gene050232.t1 AT3G50060 41.837 98 57 0 140 237 5 102 1.11e-23 99.0
MS.gene050232.t1 AT5G14750 43.243 111 61 2 141 250 18 127 1.18e-23 96.7
MS.gene050232.t1 AT3G11440 42.708 96 54 1 141 235 43 138 1.77e-23 101
MS.gene050232.t1 AT3G11440 42.708 96 54 1 141 235 43 138 1.77e-23 101
MS.gene050232.t1 AT3G11440 42.708 96 54 1 141 235 43 138 1.77e-23 101
MS.gene050232.t1 AT2G23290 44.898 98 54 0 140 237 12 109 3.17e-23 97.8
MS.gene050232.t1 AT3G27920 46.392 97 51 1 141 236 16 112 4.54e-23 95.9
MS.gene050232.t1 AT4G28110 42.593 108 59 2 141 245 14 121 5.58e-23 96.7
MS.gene050232.t1 AT2G32460 44.444 99 50 2 141 236 20 116 5.86e-23 99.4
MS.gene050232.t1 AT2G32460 44.444 99 50 2 141 236 8 104 6.50e-23 99.0
MS.gene050232.t1 AT4G12350 39.167 120 72 1 141 259 14 133 7.32e-23 96.7
MS.gene050232.t1 AT5G17800 44.660 103 55 1 132 234 86 186 1.04e-22 96.7
MS.gene050232.t1 AT5G40330 44.330 97 53 1 141 236 14 110 1.29e-22 94.4
MS.gene050232.t1 AT1G17950 38.261 115 67 1 141 255 5 115 1.37e-22 95.1
MS.gene050232.t1 AT5G55020 42.056 107 60 2 141 245 28 134 1.64e-22 98.2
MS.gene050232.t1 AT1G22640 42.727 110 61 2 137 244 10 119 1.64e-22 95.1
MS.gene050232.t1 AT4G38620 44.340 106 54 2 137 239 10 113 1.68e-22 95.5
MS.gene050232.t1 AT3G13540 31.148 183 97 5 141 299 25 202 1.91e-22 94.7
MS.gene050232.t1 AT3G28470 38.144 97 59 1 141 236 14 110 3.12e-22 95.5
MS.gene050232.t1 AT4G26930 43.299 97 54 1 141 236 21 117 3.29e-22 96.3
MS.gene050232.t1 AT4G22680 43.299 97 54 1 141 236 14 110 3.35e-22 94.4
MS.gene050232.t1 AT4G21440 40.000 120 71 1 141 259 14 133 3.72e-22 95.5
MS.gene050232.t1 AT5G06100 40.206 97 57 1 141 236 34 130 4.54e-22 96.7
MS.gene050232.t1 AT2G26950 37.097 124 69 2 126 244 3 122 4.60e-22 95.9
MS.gene050232.t1 AT1G66230 42.056 107 59 2 141 245 14 119 4.65e-22 94.4
MS.gene050232.t1 AT4G05100 41.509 106 61 1 141 245 15 120 5.08e-22 94.7
MS.gene050232.t1 AT2G47190 37.778 135 78 3 141 274 22 151 5.29e-22 94.0
MS.gene050232.t1 AT5G26660 33.333 129 82 2 141 268 14 139 6.44e-22 95.1
MS.gene050232.t1 AT5G06100 40.206 97 57 1 141 236 34 130 7.98e-22 96.3
MS.gene050232.t1 AT5G06100 40.206 97 57 1 141 236 34 130 7.98e-22 96.3
MS.gene050232.t1 AT5G06100 40.206 97 57 1 141 236 34 130 7.98e-22 96.3
MS.gene050232.t1 AT5G06100 40.206 97 57 1 141 236 34 130 7.98e-22 96.3
MS.gene050232.t1 AT4G09460 44.144 111 56 3 137 243 10 118 1.39e-21 92.0
MS.gene050232.t1 AT5G12870 38.596 114 69 1 135 247 14 127 2.12e-21 92.4
MS.gene050232.t1 AT4G34990 42.202 109 61 2 138 244 11 119 2.99e-21 92.0
MS.gene050232.t1 AT3G30210 36.364 132 82 2 141 270 29 160 3.03e-21 92.0
MS.gene050232.t1 AT1G63910 41.237 97 56 1 141 236 14 110 3.77e-21 93.2
MS.gene050232.t1 AT2G16720 43.243 111 57 3 138 244 11 119 4.14e-21 91.3
MS.gene050232.t1 AT3G61250 43.299 97 52 2 141 235 14 109 4.48e-21 91.7
MS.gene050232.t1 AT5G10280 42.268 97 55 1 141 236 14 110 6.13e-21 92.0
MS.gene050232.t1 AT1G74430 39.450 109 62 2 141 248 14 119 6.88e-21 90.9
MS.gene050232.t1 AT3G24310 42.105 95 54 1 141 234 20 114 7.28e-21 90.5
MS.gene050232.t1 AT5G54230 38.843 121 73 1 141 260 14 134 7.46e-21 91.7
MS.gene050232.t1 AT3G01530 45.263 95 51 1 141 234 27 121 7.51e-21 89.4
MS.gene050232.t1 AT3G13890 36.792 106 63 2 141 245 14 116 9.62e-21 91.7
MS.gene050232.t1 AT3G13890 35.652 115 61 2 141 245 14 125 1.11e-20 91.7
MS.gene050232.t1 AT5G60890 42.202 109 59 2 141 248 14 119 1.34e-20 90.5
MS.gene050232.t1 AT4G13480 37.168 113 67 2 141 252 8 117 1.45e-20 89.7
MS.gene050232.t1 AT5G35550 40.367 109 64 1 141 248 16 124 1.68e-20 89.4
MS.gene050232.t1 AT3G27810 44.211 95 52 1 141 234 22 116 1.91e-20 88.6
MS.gene050232.t1 AT1G09540 37.615 109 64 2 141 248 14 119 2.28e-20 90.9
MS.gene050232.t1 AT2G31180 37.069 116 65 3 141 253 14 124 2.30e-20 89.0
MS.gene050232.t1 AT2G26960 37.008 127 76 2 117 242 1 124 3.08e-20 90.9
MS.gene050232.t1 AT5G16770 38.583 127 61 2 141 266 14 124 3.15e-20 89.7
MS.gene050232.t1 AT5G16770 38.583 127 61 2 141 266 14 124 3.15e-20 89.7
MS.gene050232.t1 AT3G08500 40.367 109 57 3 141 246 32 135 3.29e-20 90.1
MS.gene050232.t1 AT1G57560 36.697 109 65 2 141 248 14 119 3.58e-20 89.0
MS.gene050232.t1 AT1G25340 41.489 94 51 1 141 234 20 109 3.72e-20 89.0
MS.gene050232.t1 AT5G52600 31.481 162 101 3 137 291 10 168 3.84e-20 87.0
MS.gene050232.t1 AT1G48000 42.105 95 54 1 141 234 34 128 3.92e-20 88.2
MS.gene050232.t1 AT1G57560 38.182 110 62 3 141 248 14 119 4.15e-20 89.4
MS.gene050232.t1 AT5G56110 36.842 114 64 2 141 253 14 120 4.53e-20 89.4
MS.gene050232.t1 AT5G16770 38.583 127 61 2 141 266 14 124 5.22e-20 89.4
MS.gene050232.t1 AT5G16770 38.583 127 61 2 141 266 14 124 5.22e-20 89.4
MS.gene050232.t1 AT5G65230 40.206 97 57 1 141 236 14 110 5.24e-20 89.0
MS.gene050232.t1 AT3G23250 32.258 155 97 3 141 289 14 166 5.53e-20 88.6
MS.gene050232.t1 AT1G25340 41.489 94 51 1 141 234 20 109 5.69e-20 89.0
MS.gene050232.t1 AT1G34670 33.846 130 85 1 141 269 14 143 5.75e-20 89.7
MS.gene050232.t1 AT1G06180 41.837 98 54 2 141 236 14 110 5.78e-20 87.8
MS.gene050232.t1 AT3G60460 40.777 103 59 2 141 241 13 115 5.86e-20 88.6
MS.gene050232.t1 AT1G14350 35.897 117 74 1 144 259 28 144 6.63e-20 90.1
MS.gene050232.t1 AT1G14350 35.897 117 74 1 144 259 28 144 6.63e-20 90.1
MS.gene050232.t1 AT4G01680 36.449 107 64 2 141 246 14 117 6.65e-20 87.4
MS.gene050232.t1 AT5G40350 43.158 95 53 1 141 234 19 113 7.21e-20 86.7
MS.gene050232.t1 AT1G68320 40.000 95 56 1 141 234 21 115 9.42e-20 87.8
MS.gene050232.t1 AT1G25340 42.105 95 54 1 141 234 20 114 1.01e-19 87.8
MS.gene050232.t1 AT2G02820 39.560 91 55 0 144 234 33 123 1.44e-19 88.2
MS.gene050232.t1 AT4G01680 36.449 107 64 2 141 246 14 117 1.52e-19 88.2
MS.gene050232.t1 AT3G02940 41.000 100 58 1 141 239 14 113 1.79e-19 87.4
MS.gene050232.t1 AT5G62320 42.727 110 54 4 141 241 15 124 2.20e-19 86.3
MS.gene050232.t1 AT3G02940 41.000 100 58 1 141 239 14 113 2.54e-19 87.4
MS.gene050232.t1 AT3G02940 41.000 100 58 1 141 239 14 113 2.54e-19 87.4
MS.gene050232.t1 AT5G16600 40.187 107 61 2 141 245 14 119 2.62e-19 87.4
MS.gene050232.t1 AT5G07690 42.157 102 58 1 141 241 14 115 2.63e-19 87.4
MS.gene050232.t1 AT1G73410 35.172 145 85 2 141 285 6 141 2.90e-19 84.7
MS.gene050232.t1 AT5G07700 43.299 97 54 1 141 236 14 110 2.93e-19 87.4
MS.gene050232.t1 AT5G07700 43.299 97 54 1 141 236 14 110 2.93e-19 87.4
MS.gene050232.t1 AT1G73410 35.172 145 85 2 141 285 6 141 3.05e-19 85.5
MS.gene050232.t1 AT2G02820 39.560 91 55 0 144 234 33 123 3.17e-19 88.2
MS.gene050232.t1 AT5G61420 41.284 109 60 2 141 248 14 119 3.53e-19 87.4
MS.gene050232.t1 AT2G02820 39.560 91 55 0 144 234 33 123 3.65e-19 88.2
MS.gene050232.t1 AT1G35515 38.318 107 64 2 137 241 10 116 4.73e-19 84.3
MS.gene050232.t1 AT1G18570 40.741 108 61 2 141 245 15 122 6.88e-19 86.7
MS.gene050232.t1 AT5G62470 38.318 107 63 1 141 247 14 117 8.04e-19 86.3
MS.gene050232.t1 AT4G17785 38.000 100 61 1 141 239 15 114 8.86e-19 86.3
MS.gene050232.t1 AT4G01680 33.613 119 63 2 141 246 14 129 1.03e-18 85.9
MS.gene050232.t1 AT1G74080 32.432 148 96 2 141 287 14 158 1.07e-18 85.9
MS.gene050232.t1 AT5G15310 40.206 97 57 1 141 236 14 110 1.18e-18 84.0
MS.gene050232.t1 AT4G17785 38.000 100 61 1 141 239 15 114 1.21e-18 85.9
MS.gene050232.t1 AT5G39700 36.842 114 68 1 142 255 57 166 2.04e-18 82.0
MS.gene050232.t1 AT5G15310 38.679 106 64 1 141 245 14 119 2.07e-18 84.7
MS.gene050232.t1 AT5G15310 38.679 106 64 1 141 245 14 119 2.16e-18 84.7
MS.gene050232.t1 AT1G16490 35.714 126 75 3 137 258 12 135 2.23e-18 84.0
MS.gene050232.t1 AT1G18710 36.697 109 65 2 141 248 14 119 3.98e-18 83.2
MS.gene050232.t1 AT3G48920 42.268 97 55 1 141 236 20 116 4.52e-18 82.8
MS.gene050232.t1 AT5G14340 37.037 108 62 3 141 246 26 129 4.76e-18 82.8
MS.gene050232.t1 AT1G56160 38.776 98 57 2 141 236 16 112 5.46e-18 83.2
MS.gene050232.t1 AT4G37780 38.318 107 63 3 141 244 14 120 5.65e-18 83.2
MS.gene050232.t1 AT5G49330 33.333 135 79 4 141 272 14 140 6.53e-18 83.6
MS.gene050232.t1 AT3G53200 43.617 94 46 2 174 262 12 103 7.11e-18 80.9
MS.gene050232.t1 AT5G52260 41.071 112 61 3 141 248 14 124 9.19e-18 82.0
MS.gene050232.t1 AT3G47600 37.963 108 63 2 141 247 14 118 1.01e-17 82.8
MS.gene050232.t1 AT5G26660 35.789 95 58 1 174 268 17 108 1.39e-17 82.4
MS.gene050232.t1 AT5G14750 44.156 77 42 1 174 250 18 93 1.47e-17 79.3
MS.gene050232.t1 AT3G01140 39.583 96 57 1 141 235 57 152 1.95e-17 82.8
MS.gene050232.t1 AT1G79180 36.893 103 60 2 137 236 12 112 2.02e-17 81.6
MS.gene050232.t1 AT3G01140 39.583 96 57 1 141 235 14 109 2.05e-17 82.0
MS.gene050232.t1 AT1G66370 35.537 121 71 2 141 254 10 130 2.19e-17 80.5
MS.gene050232.t1 AT5G23000 39.048 105 62 2 137 239 10 114 2.21e-17 82.0
MS.gene050232.t1 AT5G57620 38.182 110 65 3 141 247 14 123 2.27e-17 82.0
MS.gene050232.t1 AT5G62470 37.963 108 63 2 141 247 14 118 2.42e-17 82.0
MS.gene050232.t1 AT1G08810 36.842 114 70 2 141 252 14 127 5.52e-17 80.1
MS.gene050232.t1 AT5G65790 37.838 111 64 3 141 249 14 121 5.75e-17 81.3
MS.gene050232.t1 AT2G47460 31.690 142 79 3 141 281 14 138 6.02e-17 81.3
MS.gene050232.t1 AT5G49620 39.640 111 63 2 128 234 12 122 6.55e-17 80.1
MS.gene050232.t1 AT3G62610 38.144 97 59 1 141 236 14 110 8.54e-17 80.5
MS.gene050232.t1 AT1G74650 40.206 97 57 1 141 236 14 110 1.09e-16 80.1
MS.gene050232.t1 AT3G18100 39.583 96 58 0 139 234 544 639 1.21e-16 81.3
MS.gene050232.t1 AT3G18100 41.667 96 54 2 140 234 494 588 4.83e-15 76.3
MS.gene050232.t1 AT3G18100 39.583 96 58 0 139 234 496 591 1.43e-16 80.9
MS.gene050232.t1 AT3G18100 41.667 96 54 2 140 234 446 540 6.11e-15 75.9
MS.gene050232.t1 AT3G18100 39.583 96 58 0 139 234 383 478 1.53e-16 80.9
MS.gene050232.t1 AT3G18100 41.667 96 54 2 140 234 333 427 6.71e-15 75.9
MS.gene050232.t1 AT3G18100 39.583 96 58 0 139 234 331 426 1.73e-16 80.5
MS.gene050232.t1 AT3G18100 41.667 96 54 2 140 234 281 375 7.41e-15 75.5
MS.gene050232.t1 AT3G49690 37.838 111 64 3 141 249 14 121 2.00e-16 79.0
MS.gene050232.t1 AT3G28910 38.542 96 58 1 141 235 14 109 3.13e-16 78.6
MS.gene050232.t1 AT2G37630 34.211 114 70 2 141 251 4 115 3.92e-16 78.6
MS.gene050232.t1 AT4G25560 37.383 107 64 2 141 244 12 118 3.92e-16 77.8
MS.gene050232.t1 AT5G35550 43.421 76 43 0 174 249 53 128 4.13e-16 77.4
MS.gene050232.t1 AT1G66380 40.000 115 65 2 141 251 10 124 4.40e-16 74.3
MS.gene050232.t1 AT3G06490 35.965 114 71 2 122 234 3 115 5.79e-16 77.8
MS.gene050232.t1 AT3G12820 36.082 97 61 1 141 236 16 112 1.46e-15 75.5
MS.gene050232.t1 AT1G56650 36.441 118 71 2 141 254 10 127 2.76e-15 74.7
MS.gene050232.t1 AT3G27810 49.180 61 31 0 174 234 7 67 3.87e-15 72.8
MS.gene050232.t1 AT2G36890 37.037 108 65 3 141 245 14 121 6.25e-15 74.3
MS.gene050232.t1 AT2G36890 37.037 108 65 3 141 245 55 162 7.95e-15 74.7
MS.gene050232.t1 AT5G59780 37.037 81 48 1 174 254 23 100 8.57e-15 72.8
MS.gene050232.t1 AT3G46130 37.037 81 48 1 174 254 13 90 1.02e-14 72.8
MS.gene050232.t1 AT3G46130 37.037 81 48 1 174 254 23 100 1.08e-14 72.8
MS.gene050232.t1 AT5G40350 47.541 61 32 0 174 234 8 68 2.55e-14 70.5
MS.gene050232.t1 AT1G66390 40.206 97 57 1 141 236 10 106 6.81e-14 70.9
MS.gene050232.t1 AT1G79180 29.851 134 60 3 137 236 12 145 7.67e-14 71.6
MS.gene050232.t1 AT5G49620 35.200 125 63 3 128 234 12 136 1.02e-13 71.2
MS.gene050232.t1 AT3G47600 34.694 98 61 1 150 247 18 112 1.71e-13 70.5
MS.gene050232.t1 AT3G12820 44.444 63 35 0 174 236 2 64 2.11e-13 68.2
MS.gene050232.t1 AT5G14750 43.939 66 36 1 185 250 2 66 2.25e-13 67.0
MS.gene050232.t1 AT5G14750 43.939 66 36 1 185 250 2 66 2.25e-13 67.0
MS.gene050232.t1 AT1G22640 50.820 61 29 1 185 244 2 62 2.93e-13 68.2
MS.gene050232.t1 AT1G66380 43.590 78 41 1 177 251 14 91 1.44e-11 60.8
MS.gene050232.t1 AT3G23250 31.000 100 66 1 185 281 2 101 5.27e-11 62.0
MS.gene050232.t1 AT1G14350 36.709 79 49 1 182 259 23 101 5.44e-11 63.5
MS.gene050232.t1 AT1G14350 36.709 79 49 1 182 259 23 101 5.44e-11 63.5

Find 82 sgRNAs with CRISPR-Local

Find 110 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTGCTTCAAAAGTATATT+AGG 0.173365 7.1:+53438377 MS.gene050232:CDS
TAAACACTGACAAAATATTT+TGG 0.182897 7.1:+53436902 MS.gene050232:CDS
ACCATCTTCAACCAAATATT+AGG 0.197577 7.1:+53437492 MS.gene050232:CDS
GTCCAGTTCGTGAGTTTGTT+AGG 0.259199 7.1:+53437395 MS.gene050232:CDS
GAGAGAGAGACCCTAATATT+TGG 0.260215 7.1:-53437503 None:intergenic
GTCATATATTGCTGAATTCT+TGG 0.271338 7.1:+53437430 MS.gene050232:CDS
GGAGCTTAAACATCATTTCT+TGG 0.304090 7.1:-53436978 None:intergenic
TAGATTGAAGGGAATTGTTT+TGG 0.328298 7.1:-53436933 None:intergenic
GAAAAGGAAATGATGGATAA+TGG 0.333050 7.1:+53438424 MS.gene050232:CDS
CAATGGAATAAAGATGTTCT+TGG 0.353876 7.1:-53436999 None:intergenic
AACATCATTTCTTGGATTTG+AGG 0.356591 7.1:-53436970 None:intergenic
ATTGCTTCAAAAGTATATTA+GGG 0.370829 7.1:+53438378 MS.gene050232:CDS
CGAGTCTTTGATCAGCATCC+AGG 0.386585 7.1:-53437041 None:intergenic
CCATCTTCAACCAAATATTA+GGG 0.392145 7.1:+53437493 MS.gene050232:CDS
ATTGATGCTCATAAAGAAGT+TGG 0.392391 7.1:+53438220 MS.gene050232:CDS
ATGACTTCAACTATGAAGAT+TGG 0.400351 7.1:+53438464 MS.gene050232:CDS
AGCATTCCAATGATTCTTGA+TGG 0.402407 7.1:-53438293 None:intergenic
GACATAATGGATTGTGAGGT+TGG 0.402522 7.1:+53438547 MS.gene050232:CDS
AGAATTCCATCAAGAATCAT+TGG 0.409549 7.1:+53438287 MS.gene050232:CDS
CTGAAGGTTTACTAGATTGA+AGG 0.409840 7.1:-53436945 None:intergenic
AAAACCTTCTGCGGACTCAT+TGG 0.416533 7.1:-53436839 None:intergenic
AAAAGGAAATGATGGATAAT+GGG 0.418778 7.1:+53438425 MS.gene050232:CDS
CCCTAATATTTGGTTGAAGA+TGG 0.419887 7.1:-53437493 None:intergenic
TCCAGTTCGTGAGTTTGTTA+GGG 0.424912 7.1:+53437396 MS.gene050232:CDS
GCCCTAACAAACTCACGAAC+TGG 0.432105 7.1:-53437397 None:intergenic
GTAGGTTTGAATGCAGGGCT+TGG 0.436775 7.1:-53436811 None:intergenic
GCATCCTCCTCTTCGTTCCA+TGG 0.437244 7.1:-53438190 None:intergenic
CTCATACAATCAAAGGCAAA+TGG 0.440530 7.1:+53437130 MS.gene050232:CDS
GAATTCTTGGATGGAAAGAC+TGG 0.443900 7.1:+53437443 MS.gene050232:CDS
TAGGTTTGAATGCAGGGCTT+GGG 0.447471 7.1:-53436810 None:intergenic
TTTGATTGTATGAGTAACTT+TGG 0.461263 7.1:-53437121 None:intergenic
GATGTTGGTGGCTATATTGA+TGG 0.461323 7.1:+53438502 MS.gene050232:CDS
GAAATTTCAAAGAGATTGCC+AGG 0.462778 7.1:+53438256 MS.gene050232:CDS
TGACTTCAACTATGAAGATT+GGG 0.476506 7.1:+53438465 MS.gene050232:CDS
GTGTGTGTAGGTTTGAATGC+AGG 0.477954 7.1:-53436817 None:intergenic
CATAAGAAAGGGACCGGTGG+AGG 0.481113 7.1:-53436785 None:intergenic
TCTTGGATTTGAGGTTCTGA+AGG 0.490355 7.1:-53436961 None:intergenic
TTGATGCTCATAAAGAAGTT+GGG 0.493054 7.1:+53438221 MS.gene050232:CDS
ACATTGTGAAAAGGAAATGA+TGG 0.496363 7.1:+53438417 MS.gene050232:CDS
TATATTGCTGAATTCTTGGA+TGG 0.498048 7.1:+53437434 MS.gene050232:CDS
GGAAACAGTGTTGGGAGAGA+TGG 0.503752 7.1:+53437465 MS.gene050232:CDS
ATAAAGAAGTTGGGAACAAG+TGG 0.509921 7.1:+53438230 MS.gene050232:CDS
AGTTGCTCAACATTGTGAAA+AGG 0.511770 7.1:+53438408 MS.gene050232:CDS
ATTAAATACAGAAGGGGCCA+TGG 0.514474 7.1:+53438173 MS.gene050232:intron
GAAAGACTGGGAAACAGTGT+TGG 0.523695 7.1:+53437456 MS.gene050232:CDS
TGTGTGTAGGTTTGAATGCA+GGG 0.526772 7.1:-53436816 None:intergenic
TGAAGGTTTACTAGATTGAA+GGG 0.528897 7.1:-53436944 None:intergenic
ATCATTGGAATGCTACTAAG+AGG 0.529236 7.1:+53438302 MS.gene050232:CDS
TGATGGTTAGCATCATTAAG+AGG 0.531273 7.1:-53436736 None:intergenic
AATCCAAGATGAAAGAAAAG+AGG 0.537436 7.1:+53438332 MS.gene050232:CDS
AATGGACTGCAGATGAGGAC+AGG 0.540682 7.1:+53437148 MS.gene050232:CDS
AGGGCTTGGGATCATAAGAA+AGG 0.546742 7.1:-53436797 None:intergenic
GAGTCTTTGATCAGCATCCA+GGG 0.547717 7.1:-53437040 None:intergenic
AAAGTTACTCATACAATCAA+AGG 0.548539 7.1:+53437123 MS.gene050232:CDS
TTGCAGCCAAAACAAAATGA+TGG 0.549491 7.1:-53436753 None:intergenic
AAAGACTGGGAAACAGTGTT+GGG 0.552335 7.1:+53437457 MS.gene050232:CDS
GTTTGTTAGGGCTTAAACAA+TGG 0.552444 7.1:+53437408 MS.gene050232:CDS
GCAATAGATCATTCCTCCAC+CGG 0.554435 7.1:+53436772 MS.gene050232:CDS
TGTAACAAACAATAACAGAA+TGG 0.554571 7.1:+53436861 MS.gene050232:CDS
ATGGAATTCTCAGTACGTCC+TGG 0.557763 7.1:-53438274 None:intergenic
GTTTGTTACAAAACCTTCTG+CGG 0.557870 7.1:-53436848 None:intergenic
GCGGACTCATTGGTGTGTGT+AGG 0.564328 7.1:-53436829 None:intergenic
AAAGAAAAGAGGAGCAACAC+TGG 0.566738 7.1:+53438343 MS.gene050232:CDS
AGGCAAATGGACTGCAGATG+AGG 0.572483 7.1:+53437143 MS.gene050232:CDS
GGGCTTGGGATCATAAGAAA+GGG 0.573394 7.1:-53436796 None:intergenic
AACAGAATGGAAGCCGTGCA+TGG 0.579974 7.1:+53436874 MS.gene050232:CDS
TGGGATCATAAGAAAGGGAC+CGG 0.586833 7.1:-53436791 None:intergenic
AATGATGGATAATGGGAATG+AGG 0.596781 7.1:+53438432 MS.gene050232:CDS
TGAAGATTGGGCAACTCAAG+AGG 0.606538 7.1:+53438477 MS.gene050232:CDS
ACTCAAGAGGATGATGTTGG+TGG 0.613174 7.1:+53438490 MS.gene050232:CDS
GGGGCCATGGAACGAAGAGG+AGG 0.634302 7.1:+53438186 MS.gene050232:CDS
CACACCAATGAGTCCGCAGA+AGG 0.636636 7.1:+53436835 MS.gene050232:CDS
AATTCTTGGATGGAAAGACT+GGG 0.644480 7.1:+53437444 MS.gene050232:CDS
TAAAGAAGTTGGGAACAAGT+GGG 0.646227 7.1:+53438231 MS.gene050232:CDS
AGTGTTTAGATAGCCATGCA+CGG 0.657726 7.1:-53436887 None:intergenic
GCAACTCAAGAGGATGATGT+TGG 0.663745 7.1:+53438487 MS.gene050232:CDS
TGGTTAGCATCATTAAGAGG+TGG 0.664839 7.1:-53436733 None:intergenic
GTCTTTGATCAGCATCCAGG+GGG 0.668279 7.1:-53437038 None:intergenic
GATCATAAGAAAGGGACCGG+TGG 0.672440 7.1:-53436788 None:intergenic
AGTCTTTGATCAGCATCCAG+GGG 0.672448 7.1:-53437039 None:intergenic
GAAGGGGCCATGGAACGAAG+AGG 0.680495 7.1:+53438183 MS.gene050232:intron
ATATGACATAATGGATTGTG+AGG 0.688731 7.1:+53438543 MS.gene050232:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTGAAAATTGATATAATT+TGG - chr7.1:53437627-53437646 None:intergenic 10.0%
!!! ATCTCTTTTTAAATACTTAA+TGG + chr7.1:53437228-53437247 MS.gene050232:intron 15.0%
!! ATCAATTATAAACCAACATT+AGG - chr7.1:53437303-53437322 None:intergenic 20.0%
!! ATGTACAAAAATTTGAATAG+AGG - chr7.1:53438140-53438159 None:intergenic 20.0%
!! CTATGTAAATATCAATTTAG+TGG - chr7.1:53437762-53437781 None:intergenic 20.0%
!!! AATTGCTTCAAAAGTATATT+AGG + chr7.1:53438377-53438396 MS.gene050232:CDS 20.0%
!!! ATTGCTTCAAAAGTATATTA+GGG + chr7.1:53438378-53438397 MS.gene050232:CDS 20.0%
!!! GTTTCATCAGATATATATTT+TGG - chr7.1:53437886-53437905 None:intergenic 20.0%
!!! TAAACACTGACAAAATATTT+TGG + chr7.1:53436902-53436921 MS.gene050232:CDS 20.0%
!!! TATTCATTTTATCCTAATGT+TGG + chr7.1:53437288-53437307 MS.gene050232:intron 20.0%
! AAAGTTACTCATACAATCAA+AGG + chr7.1:53437123-53437142 MS.gene050232:CDS 25.0%
! ATAACAACATGAAAATGAGA+AGG - chr7.1:53437574-53437593 None:intergenic 25.0%
! GAAAAATGGATATGACATAA+TGG + chr7.1:53438534-53438553 MS.gene050232:CDS 25.0%
! GATGGAAATGAAATGAAAAA+TGG + chr7.1:53438520-53438539 MS.gene050232:CDS 25.0%
! TGTAACAAACAATAACAGAA+TGG + chr7.1:53436861-53436880 MS.gene050232:CDS 25.0%
! TTTGATTGTATGAGTAACTT+TGG - chr7.1:53437124-53437143 None:intergenic 25.0%
!! TATAGCATGTCTTATTAGAT+AGG + chr7.1:53438037-53438056 MS.gene050232:intron 25.0%
!!! AAAAGGAAATGATGGATAAT+GGG + chr7.1:53438425-53438444 MS.gene050232:CDS 25.0%
!!! ATATATATTTTGGCACAAGT+AGG - chr7.1:53437876-53437895 None:intergenic 25.0%
!!! TATATATTTTGGCACAAGTA+GGG - chr7.1:53437875-53437894 None:intergenic 25.0%
!!! TTTTGAAGCAATTTTCTTCT+TGG - chr7.1:53438370-53438389 None:intergenic 25.0%
AACATCATTTCTTGGATTTG+AGG - chr7.1:53436973-53436992 None:intergenic 30.0%
AATCCAAGATGAAAGAAAAG+AGG + chr7.1:53438332-53438351 MS.gene050232:CDS 30.0%
ACATTGTGAAAAGGAAATGA+TGG + chr7.1:53438417-53438436 MS.gene050232:CDS 30.0%
ACCATCTTCAACCAAATATT+AGG + chr7.1:53437492-53437511 MS.gene050232:CDS 30.0%
AGAATTCCATCAAGAATCAT+TGG + chr7.1:53438287-53438306 MS.gene050232:CDS 30.0%
ATCCACACATTAAATACAGA+AGG + chr7.1:53438165-53438184 MS.gene050232:intron 30.0%
ATGACTTCAACTATGAAGAT+TGG + chr7.1:53438464-53438483 MS.gene050232:CDS 30.0%
ATTGATGCTCATAAAGAAGT+TGG + chr7.1:53438220-53438239 MS.gene050232:CDS 30.0%
CAATGGAATAAAGATGTTCT+TGG - chr7.1:53437002-53437021 None:intergenic 30.0%
CATGTGCAATATAAATTGTC+TGG + chr7.1:53438004-53438023 MS.gene050232:intron 30.0%
CCATCTTCAACCAAATATTA+GGG + chr7.1:53437493-53437512 MS.gene050232:CDS 30.0%
CTTACACCTCAAAATATGTT+GGG + chr7.1:53437845-53437864 MS.gene050232:intron 30.0%
GTCATATATTGCTGAATTCT+TGG + chr7.1:53437430-53437449 MS.gene050232:CDS 30.0%
TATATTGCTGAATTCTTGGA+TGG + chr7.1:53437434-53437453 MS.gene050232:CDS 30.0%
TCCACACATTAAATACAGAA+GGG + chr7.1:53438166-53438185 MS.gene050232:intron 30.0%
TGAAGGTTTACTAGATTGAA+GGG - chr7.1:53436947-53436966 None:intergenic 30.0%
TGACTTCAACTATGAAGATT+GGG + chr7.1:53438465-53438484 MS.gene050232:CDS 30.0%
TTGATGCTCATAAAGAAGTT+GGG + chr7.1:53438221-53438240 MS.gene050232:CDS 30.0%
! TAGATTGAAGGGAATTGTTT+TGG - chr7.1:53436936-53436955 None:intergenic 30.0%
! TTACTTGATCACTCTTTTGT+TGG - chr7.1:53437083-53437102 None:intergenic 30.0%
!! ATATGACATAATGGATTGTG+AGG + chr7.1:53438543-53438562 MS.gene050232:CDS 30.0%
!! GAAAAGGAAATGATGGATAA+TGG + chr7.1:53438424-53438443 MS.gene050232:CDS 30.0%
!! GTTGTTTTCAGTTCTATCAA+TGG - chr7.1:53437019-53437038 None:intergenic 30.0%
!! TGCTAACCATCATTTTGTTT+TGG + chr7.1:53436747-53436766 MS.gene050232:CDS 30.0%
AATTCTTGGATGGAAAGACT+GGG + chr7.1:53437444-53437463 MS.gene050232:CDS 35.0%
AGCATTCCAATGATTCTTGA+TGG - chr7.1:53438296-53438315 None:intergenic 35.0%
AGTTGCTCAACATTGTGAAA+AGG + chr7.1:53438408-53438427 MS.gene050232:CDS 35.0%
ATAAAGAAGTTGGGAACAAG+TGG + chr7.1:53438230-53438249 MS.gene050232:CDS 35.0%
ATCATTGGAATGCTACTAAG+AGG + chr7.1:53438302-53438321 MS.gene050232:CDS 35.0%
CCACACATTAAATACAGAAG+GGG + chr7.1:53438167-53438186 MS.gene050232:intron 35.0%
CCCTAATATTTGGTTGAAGA+TGG - chr7.1:53437496-53437515 None:intergenic 35.0%
CCTTACACCTCAAAATATGT+TGG + chr7.1:53437844-53437863 MS.gene050232:intron 35.0%
CTCATACAATCAAAGGCAAA+TGG + chr7.1:53437130-53437149 MS.gene050232:CDS 35.0%
CTGAAGGTTTACTAGATTGA+AGG - chr7.1:53436948-53436967 None:intergenic 35.0%
GAAATTTCAAAGAGATTGCC+AGG + chr7.1:53438256-53438275 MS.gene050232:CDS 35.0%
GGAGCTTAAACATCATTTCT+TGG - chr7.1:53436981-53437000 None:intergenic 35.0%
TAAAGAAGTTGGGAACAAGT+GGG + chr7.1:53438231-53438250 MS.gene050232:CDS 35.0%
TGATGGTTAGCATCATTAAG+AGG - chr7.1:53436739-53436758 None:intergenic 35.0%
TTGCAGCCAAAACAAAATGA+TGG - chr7.1:53436756-53436775 None:intergenic 35.0%
! GTTTGTTACAAAACCTTCTG+CGG - chr7.1:53436851-53436870 None:intergenic 35.0%
! GTTTGTTAGGGCTTAAACAA+TGG + chr7.1:53437408-53437427 MS.gene050232:CDS 35.0%
!! AATGATGGATAATGGGAATG+AGG + chr7.1:53438432-53438451 MS.gene050232:CDS 35.0%
!!! CCAACATATTTTGAGGTGTA+AGG - chr7.1:53437847-53437866 None:intergenic 35.0%
AAAGAAAAGAGGAGCAACAC+TGG + chr7.1:53438343-53438362 MS.gene050232:CDS 40.0%
AAAGACTGGGAAACAGTGTT+GGG + chr7.1:53437457-53437476 MS.gene050232:CDS 40.0%
AGTGTTTAGATAGCCATGCA+CGG - chr7.1:53436890-53436909 None:intergenic 40.0%
ATTAAATACAGAAGGGGCCA+TGG + chr7.1:53438173-53438192 MS.gene050232:intron 40.0%
CCCCTTCTGTATTTAATGTG+TGG - chr7.1:53438170-53438189 None:intergenic 40.0%
GAATTCTTGGATGGAAAGAC+TGG + chr7.1:53437443-53437462 MS.gene050232:CDS 40.0%
GAGAGAGAGACCCTAATATT+TGG - chr7.1:53437506-53437525 None:intergenic 40.0%
TGGTTAGCATCATTAAGAGG+TGG - chr7.1:53436736-53436755 None:intergenic 40.0%
TGTGTGTAGGTTTGAATGCA+GGG - chr7.1:53436819-53436838 None:intergenic 40.0%
! GCTCCTCTTTTCTTTCATCT+TGG - chr7.1:53438338-53438357 None:intergenic 40.0%
! GGTCAACCCAACATATTTTG+AGG - chr7.1:53437854-53437873 None:intergenic 40.0%
! TCTTGGATTTGAGGTTCTGA+AGG - chr7.1:53436964-53436983 None:intergenic 40.0%
!! GACATAATGGATTGTGAGGT+TGG + chr7.1:53438547-53438566 MS.gene050232:CDS 40.0%
!! GATGTTGGTGGCTATATTGA+TGG + chr7.1:53438502-53438521 MS.gene050232:CDS 40.0%
!! TCCAGTTCGTGAGTTTGTTA+GGG + chr7.1:53437396-53437415 MS.gene050232:CDS 40.0%
AAAACCTTCTGCGGACTCAT+TGG - chr7.1:53436842-53436861 None:intergenic 45.0%
ACTCAAGAGGATGATGTTGG+TGG + chr7.1:53438490-53438509 MS.gene050232:CDS 45.0%
AGGGCTTGGGATCATAAGAA+AGG - chr7.1:53436800-53436819 None:intergenic 45.0%
AGTCTTTGATCAGCATCCAG+GGG - chr7.1:53437042-53437061 None:intergenic 45.0%
ATGGAATTCTCAGTACGTCC+TGG - chr7.1:53438277-53438296 None:intergenic 45.0%
GAAAGACTGGGAAACAGTGT+TGG + chr7.1:53437456-53437475 MS.gene050232:CDS 45.0%
GAGTCTTTGATCAGCATCCA+GGG - chr7.1:53437043-53437062 None:intergenic 45.0%
GCAACTCAAGAGGATGATGT+TGG + chr7.1:53438487-53438506 MS.gene050232:CDS 45.0%
GCAATAGATCATTCCTCCAC+CGG + chr7.1:53436772-53436791 MS.gene050232:CDS 45.0%
GGGCTTGGGATCATAAGAAA+GGG - chr7.1:53436799-53436818 None:intergenic 45.0%
GTGTGTGTAGGTTTGAATGC+AGG - chr7.1:53436820-53436839 None:intergenic 45.0%
TAGAACTGAAAACAACCCCC+TGG + chr7.1:53437023-53437042 MS.gene050232:CDS 45.0%
TAGGTTTGAATGCAGGGCTT+GGG - chr7.1:53436813-53436832 None:intergenic 45.0%
TGAAGATTGGGCAACTCAAG+AGG + chr7.1:53438477-53438496 MS.gene050232:CDS 45.0%
TGGGATCATAAGAAAGGGAC+CGG - chr7.1:53436794-53436813 None:intergenic 45.0%
! GTCCAGTTCGTGAGTTTGTT+AGG + chr7.1:53437395-53437414 MS.gene050232:CDS 45.0%
AACAGAATGGAAGCCGTGCA+TGG + chr7.1:53436874-53436893 MS.gene050232:CDS 50.0%
CGAGTCTTTGATCAGCATCC+AGG - chr7.1:53437044-53437063 None:intergenic 50.0%
GATCATAAGAAAGGGACCGG+TGG - chr7.1:53436791-53436810 None:intergenic 50.0%
GCCCTAACAAACTCACGAAC+TGG - chr7.1:53437400-53437419 None:intergenic 50.0%
GTAGGTTTGAATGCAGGGCT+TGG - chr7.1:53436814-53436833 None:intergenic 50.0%
GTCTTTGATCAGCATCCAGG+GGG - chr7.1:53437041-53437060 None:intergenic 50.0%
! GGAAACAGTGTTGGGAGAGA+TGG + chr7.1:53437465-53437484 MS.gene050232:CDS 50.0%
!! AATGGACTGCAGATGAGGAC+AGG + chr7.1:53437148-53437167 MS.gene050232:CDS 50.0%
!! AGGCAAATGGACTGCAGATG+AGG + chr7.1:53437143-53437162 MS.gene050232:CDS 50.0%
CACACCAATGAGTCCGCAGA+AGG + chr7.1:53436835-53436854 MS.gene050232:CDS 55.0%
CATAAGAAAGGGACCGGTGG+AGG - chr7.1:53436788-53436807 None:intergenic 55.0%
GCATCCTCCTCTTCGTTCCA+TGG - chr7.1:53438193-53438212 None:intergenic 55.0%
GCGGACTCATTGGTGTGTGT+AGG - chr7.1:53436832-53436851 None:intergenic 55.0%
GAAGGGGCCATGGAACGAAG+AGG + chr7.1:53438183-53438202 MS.gene050232:intron 60.0%
GGGGCCATGGAACGAAGAGG+AGG + chr7.1:53438186-53438205 MS.gene050232:CDS 65.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 53436721 53438576 53436721 ID=MS.gene050232
chr7.1 mRNA 53436721 53438576 53436721 ID=MS.gene050232.t1;Parent=MS.gene050232
chr7.1 exon 53436721 53437169 53436721 ID=MS.gene050232.t1.exon1;Parent=MS.gene050232.t1
chr7.1 CDS 53436721 53437169 53436721 ID=cds.MS.gene050232.t1;Parent=MS.gene050232.t1
chr7.1 exon 53437388 53437514 53437388 ID=MS.gene050232.t1.exon2;Parent=MS.gene050232.t1
chr7.1 CDS 53437388 53437514 53437388 ID=cds.MS.gene050232.t1;Parent=MS.gene050232.t1
chr7.1 exon 53438184 53438576 53438184 ID=MS.gene050232.t1.exon3;Parent=MS.gene050232.t1
chr7.1 CDS 53438184 53438576 53438184 ID=cds.MS.gene050232.t1;Parent=MS.gene050232.t1
Gene Sequence

>MS.gene050232

ATGGTTTCTTTTCCACCTCTTAATGATGCTAACCATCATTTTGTTTTGGCTGCAATAGATCATTCCTCCACCGGTCCCTTTCTTATGATCCCAAGCCCTGCATTCAAACCTACACACACCAATGAGTCCGCAGAAGGTTTTGTAACAAACAATAACAGAATGGAAGCCGTGCATGGCTATCTAAACACTGACAAAATATTTTGGAATTTCTACCAAAACAATTCCCTTCAATCTAGTAAACCTTCAGAACCTCAAATCCAAGAAATGATGTTTAAGCTCCAAGAACATCTTTATTCCATTGATAGAACTGAAAACAACCCCCTGGATGCTGATCAAAGACTCGTTCTTGTTGACAAGAACCAACAAAAGAGTGATCAAGTAAAGAATAATGAAATTTTGACCAAAGTTACTCATACAATCAAAGGCAAATGGACTGCAGATGAGGACAGGTGTAAAAATCATTCAAAATATTGTATTCACTTTCACAATGATTTCATGATTTTTTGCATCTCTTTTTAAATACTTAATGGTTATAAGAAATGTTTACTGAATTTTTTTTGTTAATTTTATTCATTTTATCCTAATGTTGGTTTATAATTGATTTGTTCAACTTGTTATCAATAGTTGACAAATGAAAAACAACTAATTGTATTTTATCATTTTGTAGCATTCTTGTCCAGTTCGTGAGTTTGTTAGGGCTTAAACAATGGTCATATATTGCTGAATTCTTGGATGGAAAGACTGGGAAACAGTGTTGGGAGAGATGGACTAACCATCTTCAACCAAATATTAGGGTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATAAAAGCTTTAGTCCTTCTCATTTTCATGTTGTTATATTTTAGTCTTTCTCTTTTACACACATATACCAAATTATATCAATTTTCAAAAAAGTATATTCGTAATTTTTTATATTTTAACATCAAATGTCATATATTTATTCAATAAATATTTTATACATTATTTTATAATAAAAAAAAGTAATTTATCGTAAAGAAATTTTCCACTAAATTGATATTTACATAGATTTTTGTGAAACAAATAAGTTAAATATATCTTAAACATTAAAGTTCTCAAATCATTGTTTGCCTTACACCTCAAAATATGTTGGGTTGACCCTACTTGTGCCAAAATATATATCTGATGAAACATAAGTTCTTCATATGTAAGTCTCATTAATTATTTTTGTTCAAAATCTTTTGTCACTAAAACACTTTTCATGAAATAACTATGTGATTCTTTTAATTACATGTGCAATATAAATTGTCTGGTTTAATTTCATATAGCATGTCTTATTAGATAGGTCATACAAATATTTCACAAAAAGACATGTTGATTACTTTAAAATCTTTCTTTAACAAATTGAAGAGATGATAATTTTCCTCTATTCAAATTTTTGTACATCTAATATCCACACATTAAATACAGAAGGGGCCATGGAACGAAGAGGAGGATGCAATTCTAATTGATGCTCATAAAGAAGTTGGGAACAAGTGGGTAGAAATTTCAAAGAGATTGCCAGGACGTACTGAGAATTCCATCAAGAATCATTGGAATGCTACTAAGAGGAGTCTGAAATCCAAGATGAAAGAAAAGAGGAGCAACACTGGTCCAAGAAGAAAATTGCTTCAAAAGTATATTAGGGAAGTCATAGTTGCTCAACATTGTGAAAAGGAAATGATGGATAATGGGAATGAGGATGACAACAATGACTTCAACTATGAAGATTGGGCAACTCAAGAGGATGATGTTGGTGGCTATATTGATGGAAATGAAATGAAAAATGGATATGACATAATGGATTGTGAGGTTGGAATCTAG
Protein sequence

>MS.gene050232.t1

MVSFPPLNDANHHFVLAAIDHSSTGPFLMIPSPAFKPTHTNESAEGFVTNNNRMEAVHGYLNTDKIFWNFYQNNSLQSSKPSEPQIQEMMFKLQEHLYSIDRTENNPLDADQRLVLVDKNQQKSDQVKNNEILTKVTHTIKGKWTADEDSILVQFVSLLGLKQWSYIAEFLDGKTGKQCWERWTNHLQPNIRKGPWNEEEDAILIDAHKEVGNKWVEISKRLPGRTENSIKNHWNATKRSLKSKMKEKRSNTGPRRKLLQKYIREVIVAQHCEKEMMDNGNEDDNNDFNYEDWATQEDDVGGYIDGNEMKNGYDIMDCEVGI