AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene050240

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene050240.t1 MTR_7g451170 82.121 330 51 1 1 330 1 322 0.0 552
MS.gene050240.t1 MTR_4g088015 68.168 333 98 1 1 333 31 355 6.40e-153 437
MS.gene050240.t1 MTR_7g037260 63.889 288 95 2 46 333 1 279 5.00e-130 376
MS.gene050240.t1 MTR_7g037130 62.153 288 100 2 46 333 1 279 3.62e-124 361
MS.gene050240.t1 MTR_7g035350 46.917 373 146 4 1 335 1 359 6.84e-104 313
MS.gene050240.t1 MTR_1g057980 52.893 242 85 2 90 331 1 213 4.73e-77 239
MS.gene050240.t1 MTR_7g450950 43.234 303 150 3 33 334 13 294 1.21e-74 234
MS.gene050240.t1 MTR_3g077650 68.217 129 38 1 185 310 175 303 1.56e-53 182
MS.gene050240.t1 MTR_3g463400 62.308 130 46 1 190 319 132 258 6.08e-52 178
MS.gene050240.t1 MTR_5g070020 60.769 130 50 1 190 319 121 249 4.19e-51 174
MS.gene050240.t1 MTR_4g105660 60.448 134 45 1 190 323 179 304 1.01e-50 174
MS.gene050240.t1 MTR_5g049190 62.602 123 46 0 188 310 16 138 4.20e-50 167
MS.gene050240.t1 MTR_7g061330 58.824 102 42 0 190 291 112 213 1.82e-36 139
MS.gene050240.t1 MTR_7g461410 58.824 102 42 0 190 291 112 213 1.82e-36 139
MS.gene050240.t1 MTR_7g061330 58.824 102 42 0 190 291 76 177 1.98e-36 138
MS.gene050240.t1 MTR_1g026870 53.922 102 47 0 190 291 84 185 3.70e-35 136
MS.gene050240.t1 MTR_3g110028 54.902 102 46 0 190 291 84 185 5.20e-35 136
MS.gene050240.t1 MTR_4g019370 53.398 103 48 0 189 291 36 138 1.52e-34 130
MS.gene050240.t1 MTR_3g101290 49.524 105 53 0 187 291 33 137 4.14e-33 123
MS.gene050240.t1 MTR_5g010650 54.286 105 46 1 181 285 102 204 1.13e-32 127
MS.gene050240.t1 MTR_7g035300 48.252 143 62 3 154 296 39 169 1.30e-32 122
MS.gene050240.t1 MTR_4g094982 50.476 105 52 0 187 291 1 105 3.87e-32 121
MS.gene050240.t1 MTR_5g082910 52.000 100 48 0 188 287 16 115 3.05e-30 117
MS.gene050240.t1 MTR_5g016510 48.571 105 54 0 187 291 1 105 6.36e-30 117
MS.gene050240.t1 MTR_4g082040 39.695 131 74 1 191 316 105 235 6.78e-27 110
MS.gene050240.t1 MTR_3g052450 41.353 133 76 2 161 291 12 144 7.13e-27 111
MS.gene050240.t1 MTR_2g089450 46.847 111 58 1 191 300 14 124 3.99e-26 105
MS.gene050240.t1 MTR_6g015455 44.762 105 58 0 187 291 1 105 7.05e-26 109
MS.gene050240.t1 MTR_6g074860 45.000 100 55 0 191 290 4 103 8.52e-26 103
MS.gene050240.t1 MTR_2g064160 43.137 102 57 1 191 291 13 114 1.04e-25 105
MS.gene050240.t1 MTR_5g041570 40.000 125 70 1 191 310 134 258 1.14e-25 107
MS.gene050240.t1 MTR_6g027340 40.458 131 74 1 178 308 3 129 1.33e-25 102
MS.gene050240.t1 MTR_3g052430 48.544 103 51 2 191 291 43 145 2.69e-25 107
MS.gene050240.t1 MTR_5g029840 44.118 102 56 1 191 291 14 115 2.72e-25 104
MS.gene050240.t1 MTR_0008s0390 44.118 102 56 1 191 291 15 116 4.17e-25 102
MS.gene050240.t1 MTR_4g478180 46.078 102 54 1 191 291 15 116 4.62e-25 104
MS.gene050240.t1 MTR_2g011660 47.525 101 52 1 191 290 15 115 6.21e-25 103
MS.gene050240.t1 MTR_4g063100 44.860 107 58 1 191 296 9 115 7.89e-25 101
MS.gene050240.t1 MTR_8g017440 42.157 102 58 1 191 291 14 115 9.55e-25 103
MS.gene050240.t1 MTR_0008s0470 43.137 102 57 1 191 291 15 116 9.57e-25 102
MS.gene050240.t1 MTR_4g073420 47.273 110 54 2 191 299 14 120 1.03e-24 102
MS.gene050240.t1 MTR_6g027370 46.078 102 55 0 190 291 98 199 1.04e-24 103
MS.gene050240.t1 MTR_5g007370 44.118 102 56 1 191 291 14 115 1.16e-24 102
MS.gene050240.t1 MTR_3g011610 36.257 171 91 3 143 311 7 161 1.45e-24 104
MS.gene050240.t1 MTR_4g100720 47.423 97 50 1 191 286 15 111 1.48e-24 99.0
MS.gene050240.t1 MTR_8g095390 42.857 112 59 2 181 291 8 115 2.58e-24 101
MS.gene050240.t1 MTR_4g091490 46.078 102 54 1 191 291 15 116 2.65e-24 102
MS.gene050240.t1 MTR_0251s0050 43.137 102 57 1 191 291 15 116 2.86e-24 100
MS.gene050240.t1 MTR_1g112760 41.509 106 61 1 191 295 15 120 3.26e-24 99.4
MS.gene050240.t1 MTR_8g017540 42.157 102 58 1 191 291 60 161 3.85e-24 102
MS.gene050240.t1 MTR_3g074520 45.098 102 55 1 191 291 14 115 3.94e-24 101
MS.gene050240.t1 MTR_2g099740 42.157 102 58 1 191 291 14 115 4.75e-24 102
MS.gene050240.t1 MTR_3g077110 41.509 106 61 1 191 295 14 119 5.31e-24 101
MS.gene050240.t1 MTR_6g027360 42.373 118 64 1 191 308 78 191 5.62e-24 100
MS.gene050240.t1 MTR_1g073170 42.017 119 63 2 191 308 22 135 7.01e-24 99.4
MS.gene050240.t1 MTR_7g086960 40.278 144 75 2 157 291 48 189 7.18e-24 100
MS.gene050240.t1 MTR_2g089620 46.078 102 54 1 191 291 14 115 7.76e-24 100
MS.gene050240.t1 MTR_2g096380 46.364 110 57 2 191 299 8 116 1.09e-23 98.2
MS.gene050240.t1 MTR_2g089420 41.905 105 60 1 191 294 13 117 1.17e-23 101
MS.gene050240.t1 MTR_3g089045 45.614 114 61 1 191 303 16 129 1.28e-23 99.4
MS.gene050240.t1 MTR_4g485530 40.909 110 64 1 187 295 10 119 1.68e-23 96.7
MS.gene050240.t1 MTR_8g042410 48.113 106 51 3 191 293 39 143 1.83e-23 101
MS.gene050240.t1 MTR_8g017500 41.176 102 59 1 191 291 14 115 1.94e-23 99.8
MS.gene050240.t1 MTR_3g097450 45.098 102 55 1 191 291 14 115 2.48e-23 98.6
MS.gene050240.t1 MTR_7g110830 43.137 102 57 1 191 291 14 115 2.77e-23 99.8
MS.gene050240.t1 MTR_1g021230 42.982 114 57 2 191 303 59 165 2.81e-23 100
MS.gene050240.t1 MTR_7g117730 46.392 97 51 1 191 286 14 110 3.07e-23 97.4
MS.gene050240.t1 MTR_4g105130 42.056 107 59 2 191 295 14 119 3.11e-23 99.4
MS.gene050240.t1 MTR_1g085040 42.157 102 58 1 191 291 14 115 3.32e-23 99.4
MS.gene050240.t1 MTR_8g031360 48.980 98 48 2 191 286 15 112 3.38e-23 98.2
MS.gene050240.t1 MTR_8g027345 47.423 97 50 1 191 286 14 110 3.89e-23 98.2
MS.gene050240.t1 MTR_3g028740 43.089 123 63 2 176 291 3 125 4.01e-23 99.0
MS.gene050240.t1 MTR_1g085640 42.157 102 58 1 191 291 14 115 5.45e-23 99.0
MS.gene050240.t1 MTR_4g082290 45.361 97 52 1 191 286 14 110 6.18e-23 99.0
MS.gene050240.t1 MTR_7g115650 43.878 98 52 2 191 286 14 110 7.08e-23 95.1
MS.gene050240.t1 MTR_5g078140 43.590 117 62 2 191 306 14 127 7.67e-23 97.4
MS.gene050240.t1 MTR_6g009430 41.176 102 59 1 191 291 14 115 8.13e-23 97.8
MS.gene050240.t1 MTR_1g045610 46.316 95 50 1 191 284 23 117 9.23e-23 96.3
MS.gene050240.t1 MTR_4g125520 41.739 115 64 2 191 302 14 128 9.38e-23 97.1
MS.gene050240.t1 MTR_8g017340 43.689 103 56 2 191 291 14 116 9.48e-23 99.4
MS.gene050240.t1 MTR_7g096930 38.211 123 73 2 191 311 14 135 9.85e-23 96.7
MS.gene050240.t1 MTR_5g079670 43.137 102 57 1 191 291 13 114 1.06e-22 94.7
MS.gene050240.t1 MTR_8g017350 43.689 103 56 2 191 291 14 116 1.15e-22 99.8
MS.gene050240.t1 MTR_3g461490 41.905 105 60 1 188 291 11 115 1.33e-22 97.1
MS.gene050240.t1 MTR_2g097910 43.137 102 57 1 191 291 22 123 1.67e-22 96.7
MS.gene050240.t1 MTR_4g029540 41.129 124 60 3 191 301 12 135 1.80e-22 96.3
MS.gene050240.t1 MTR_4g102380 45.361 97 52 1 191 286 14 110 2.23e-22 95.5
MS.gene050240.t1 MTR_4g082230 45.361 97 52 1 191 286 14 110 2.25e-22 97.4
MS.gene050240.t1 MTR_7g111290 45.833 96 51 1 191 285 14 109 2.74e-22 97.1
MS.gene050240.t1 MTR_3g065440 42.373 118 64 2 191 307 14 128 2.89e-22 95.9
MS.gene050240.t1 MTR_8g017390 40.777 103 59 2 191 291 14 116 2.97e-22 97.8
MS.gene050240.t1 MTR_7g035075 38.843 121 68 2 185 299 10 130 3.44e-22 93.2
MS.gene050240.t1 MTR_7g076740 46.392 97 50 2 191 285 14 110 3.61e-22 95.5
MS.gene050240.t1 MTR_1g062940 45.263 95 51 1 191 284 8 102 4.50e-22 93.2
MS.gene050240.t1 MTR_5g042030 44.118 102 56 1 191 291 9 110 5.27e-22 94.7
MS.gene050240.t1 MTR_8g006470 46.078 102 53 2 191 290 12 113 6.11e-22 94.4
MS.gene050240.t1 MTR_7g011170 46.392 97 51 1 191 286 14 110 7.65e-22 94.7
MS.gene050240.t1 MTR_1g043050 38.095 126 76 2 191 314 14 139 8.08e-22 93.6
MS.gene050240.t1 MTR_8g098860 43.519 108 57 2 183 286 3 110 8.53e-22 94.7
MS.gene050240.t1 MTR_5g010020 44.330 97 53 1 191 286 14 110 8.94e-22 95.1
MS.gene050240.t1 MTR_4g065017 43.137 102 57 1 191 291 19 120 1.06e-21 94.7
MS.gene050240.t1 MTR_0001s0360 39.623 106 63 1 191 295 9 114 1.26e-21 92.8
MS.gene050240.t1 MTR_1g100653 44.330 97 53 1 191 286 14 110 1.82e-21 93.2
MS.gene050240.t1 MTR_5g079290 39.623 106 63 1 191 295 19 124 2.14e-21 92.4
MS.gene050240.t1 MTR_7g017260 38.017 121 72 1 191 308 27 147 2.65e-21 92.4
MS.gene050240.t1 MTR_2g034790 42.157 102 58 1 191 291 14 115 2.66e-21 93.6
MS.gene050240.t1 MTR_4g121460 41.176 102 59 1 191 291 14 115 3.02e-21 93.6
MS.gene050240.t1 MTR_8g020490 44.330 97 53 1 191 286 10 106 3.46e-21 91.7
MS.gene050240.t1 MTR_0197s0010 39.640 111 63 3 194 301 6 115 3.56e-21 91.3
MS.gene050240.t1 MTR_5g038910 43.299 97 55 0 194 290 29 125 4.32e-21 94.4
MS.gene050240.t1 MTR_5g038910 46.154 91 49 0 194 284 29 119 5.44e-21 93.2
MS.gene050240.t1 MTR_6g006030 44.211 95 52 1 191 284 16 110 6.43e-21 89.7
MS.gene050240.t1 MTR_5g062790 45.098 102 54 2 191 290 11 112 7.21e-21 91.7
MS.gene050240.t1 MTR_5g488170 45.098 102 54 2 191 290 14 115 7.59e-21 90.5
MS.gene050240.t1 MTR_1g110460 41.176 102 59 1 191 291 28 129 8.45e-21 91.7
MS.gene050240.t1 MTR_5g088080 45.098 102 54 2 191 290 14 115 8.89e-21 90.9
MS.gene050240.t1 MTR_5g088150 45.098 102 54 2 191 290 14 115 8.89e-21 90.9
MS.gene050240.t1 MTR_5g488210 45.098 102 54 2 191 290 14 115 8.89e-21 90.9
MS.gene050240.t1 MTR_5g088640 45.098 102 54 2 191 290 14 115 9.01e-21 90.9
MS.gene050240.t1 MTR_6g012690 41.905 105 60 1 191 294 14 118 1.05e-20 92.0
MS.gene050240.t1 MTR_2g067420 44.660 103 55 2 186 286 10 112 1.15e-20 91.7
MS.gene050240.t1 MTR_5g078910 40.196 102 60 1 191 291 9 110 1.30e-20 90.9
MS.gene050240.t1 MTR_5g079220 39.623 106 63 1 191 295 23 128 1.38e-20 90.5
MS.gene050240.t1 MTR_1g076150 38.211 123 73 3 191 310 14 136 2.23e-20 89.7
MS.gene050240.t1 MTR_8g468380 38.793 116 64 1 194 309 25 133 2.72e-20 91.7
MS.gene050240.t1 MTR_1g043080 43.158 95 53 1 191 284 14 108 2.93e-20 89.0
MS.gene050240.t1 MTR_5g088610 46.078 102 53 2 191 290 11 112 3.19e-20 90.9
MS.gene050240.t1 MTR_5g078860 41.509 106 53 2 191 291 9 110 3.29e-20 90.1
MS.gene050240.t1 MTR_5g078950 39.423 104 54 2 191 289 9 108 5.46e-20 88.6
MS.gene050240.t1 MTR_7g010210 42.268 97 55 1 191 286 14 110 6.27e-20 88.6
MS.gene050240.t1 MTR_5g079120 36.691 139 72 4 160 291 35 164 6.67e-20 89.0
MS.gene050240.t1 MTR_7g010210 42.268 97 55 1 191 286 14 110 7.30e-20 89.4
MS.gene050240.t1 MTR_2g088170 52.830 106 46 3 191 293 31 135 7.30e-20 90.5
MS.gene050240.t1 MTR_1g100667 40.000 105 62 1 191 294 15 119 9.85e-20 88.2
MS.gene050240.t1 MTR_5g078800 40.196 102 60 1 191 291 9 110 1.22e-19 87.8
MS.gene050240.t1 MTR_1g083630 43.137 102 57 1 191 291 14 115 1.33e-19 90.5
MS.gene050240.t1 MTR_1g017000 39.806 103 60 2 191 291 14 116 1.40e-19 87.0
MS.gene050240.t1 MTR_3g083540 40.206 97 57 1 191 286 43 139 1.43e-19 88.2
MS.gene050240.t1 MTR_6g055910 38.889 108 65 1 191 297 16 123 1.75e-19 87.4
MS.gene050240.t1 MTR_5g014990 35.862 145 86 3 191 328 14 158 2.23e-19 87.8
MS.gene050240.t1 MTR_5g078930 38.739 111 67 1 191 300 11 121 2.32e-19 85.9
MS.gene050240.t1 MTR_8g060940 41.053 95 55 1 191 284 9 103 2.71e-19 86.3
MS.gene050240.t1 MTR_1g086510 33.824 136 89 1 175 309 7 142 3.62e-19 86.3
MS.gene050240.t1 MTR_0008s0280 39.175 97 58 1 191 286 14 110 5.12e-19 85.1
MS.gene050240.t1 MTR_6g090405 34.722 144 91 3 191 332 14 156 7.11e-19 85.1
MS.gene050240.t1 MTR_4g097570 36.667 120 73 2 191 307 14 133 7.82e-19 85.9
MS.gene050240.t1 MTR_0247s0040 40.385 104 53 2 191 289 9 108 8.49e-19 83.2
MS.gene050240.t1 MTR_1g017140 31.333 150 92 3 191 329 14 163 1.11e-18 86.3
MS.gene050240.t1 MTR_1g086530 36.667 120 75 1 191 309 35 154 1.16e-18 85.1
MS.gene050240.t1 MTR_0063s0090 35.433 127 78 3 191 316 14 137 1.20e-18 84.0
MS.gene050240.t1 MTR_6g012180 40.206 97 57 1 191 286 14 110 1.33e-18 85.5
MS.gene050240.t1 MTR_3g039990 38.182 110 67 1 191 299 15 124 1.47e-18 85.5
MS.gene050240.t1 MTR_4g063100 43.373 83 45 1 216 296 4 86 1.86e-18 83.6
MS.gene050240.t1 MTR_0140s0030 38.235 102 62 1 191 291 15 116 2.07e-18 85.1
MS.gene050240.t1 MTR_0489s0020 38.235 102 62 1 191 291 15 116 2.07e-18 85.1
MS.gene050240.t1 MTR_1g008970 54.286 70 32 0 217 286 117 186 2.64e-18 83.6
MS.gene050240.t1 MTR_7g111290 54.839 62 28 0 224 285 6 67 5.03e-18 84.3
MS.gene050240.t1 MTR_4g097570 36.134 119 74 2 191 307 14 132 5.88e-18 83.6
MS.gene050240.t1 MTR_2g095520 36.885 122 75 2 191 310 14 135 1.19e-17 82.8
MS.gene050240.t1 MTR_7g087130 38.235 102 62 1 191 291 14 115 1.24e-17 83.2
MS.gene050240.t1 MTR_0193s0090 38.614 101 61 1 191 290 9 109 2.02e-17 80.1
MS.gene050240.t1 MTR_3g103570 39.806 103 60 2 191 291 14 116 2.66e-17 82.4
MS.gene050240.t1 MTR_2g033170 39.640 111 65 2 186 295 21 130 3.01e-17 82.0
MS.gene050240.t1 MTR_4g128670 41.837 98 55 2 191 286 14 111 4.31e-17 81.6
MS.gene050240.t1 MTR_6g055910 42.169 83 46 1 217 297 12 94 4.54e-17 80.1
MS.gene050240.t1 MTR_4g057635 39.806 103 60 2 191 291 14 116 4.90e-17 81.3
MS.gene050240.t1 MTR_7g061550 36.364 110 65 2 193 299 9 116 9.71e-17 80.9
MS.gene050240.t1 MTR_4g128190 42.574 101 45 3 191 290 13 101 2.25e-16 77.8
MS.gene050240.t1 MTR_7g102110 37.864 103 62 2 191 291 14 116 3.40e-16 78.2
MS.gene050240.t1 MTR_2g096380 44.706 85 44 2 217 299 14 97 7.87e-16 75.9
MS.gene050240.t1 MTR_7g109320 46.392 97 51 1 191 286 14 110 1.15e-15 77.4
MS.gene050240.t1 MTR_4g123040 39.091 110 64 2 178 284 11 120 2.26e-15 76.3
MS.gene050240.t1 MTR_6g080360 33.684 95 62 1 190 284 478 571 6.80e-13 70.5
MS.gene050240.t1 MTR_6g080360 36.752 117 68 2 191 302 530 645 2.22e-11 65.9
MS.gene050240.t1 MTR_6g080360 33.684 95 62 1 190 284 258 351 8.74e-13 70.1
MS.gene050240.t1 MTR_6g080360 39.362 94 56 1 191 284 310 402 2.45e-11 65.5
MS.gene050240.t1 MTR_5g007300 41.333 75 43 1 191 264 66 140 1.64e-12 64.7
MS.gene050240.t1 MTR_3g045430 30.303 99 68 1 194 291 18 116 2.36e-12 67.0
MS.gene050240.t1 MTR_1g085880 39.000 100 59 2 194 291 17 116 1.27e-11 63.5
MS.gene050240.t1 MTR_1g085770 39.394 99 58 2 194 290 17 115 2.23e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene050240.t1 AT4G18770 64.925 134 39 1 190 323 216 341 8.90e-55 185
MS.gene050240.t1 AT3G27785 56.604 159 65 3 148 303 143 300 4.89e-52 178
MS.gene050240.t1 AT5G58850 44.976 209 108 1 113 321 34 235 7.12e-51 175
MS.gene050240.t1 AT5G11050 67.568 111 36 0 188 298 102 212 5.01e-49 170
MS.gene050240.t1 AT5G40360 64.865 111 39 0 191 301 158 268 1.28e-46 162
MS.gene050240.t1 AT2G25230 51.587 126 59 1 170 295 7 130 3.69e-38 136
MS.gene050240.t1 AT5G11510 52.941 102 48 0 190 291 80 181 1.01e-35 138
MS.gene050240.t1 AT5G11510 52.941 102 48 0 190 291 80 181 1.01e-35 138
MS.gene050240.t1 AT5G11510 52.941 102 48 0 190 291 80 181 1.01e-35 138
MS.gene050240.t1 AT3G09370 56.311 103 45 0 190 292 129 231 1.03e-35 136
MS.gene050240.t1 AT3G09370 56.311 103 45 0 190 292 134 236 1.11e-35 136
MS.gene050240.t1 AT5G11510 52.941 102 48 0 190 291 80 181 1.30e-35 137
MS.gene050240.t1 AT5G11510 52.941 102 48 0 190 291 80 181 1.31e-35 137
MS.gene050240.t1 AT3G09370 56.311 103 45 0 190 292 142 244 1.41e-35 135
MS.gene050240.t1 AT5G40430 51.220 123 56 2 191 310 54 175 3.32e-35 129
MS.gene050240.t1 AT5G02320 54.902 102 46 0 190 291 66 167 5.94e-35 134
MS.gene050240.t1 AT5G02320 54.902 102 46 0 190 291 126 227 6.27e-35 134
MS.gene050240.t1 AT5G02320 54.902 102 46 0 190 291 126 227 6.27e-35 134
MS.gene050240.t1 AT4G32730 51.961 102 49 0 190 291 86 187 2.21e-33 131
MS.gene050240.t1 AT4G32730 51.961 102 49 0 190 291 86 187 2.21e-33 131
MS.gene050240.t1 AT4G32730 51.961 102 49 0 190 291 86 187 2.21e-33 131
MS.gene050240.t1 AT4G32730 51.961 102 49 0 190 291 86 187 2.21e-33 131
MS.gene050240.t1 AT4G32730 51.961 102 49 0 190 291 86 187 3.10e-33 130
MS.gene050240.t1 AT3G55730 36.970 165 96 1 144 300 1 165 2.23e-32 125
MS.gene050240.t1 AT3G09230 48.333 120 59 1 188 304 52 171 2.75e-31 122
MS.gene050240.t1 AT4G37260 50.467 107 53 0 185 291 7 113 5.79e-30 117
MS.gene050240.t1 AT2G23290 48.598 107 55 0 185 291 7 113 1.31e-28 113
MS.gene050240.t1 AT5G67300 44.800 125 67 1 188 310 3 127 1.52e-28 112
MS.gene050240.t1 AT3G50060 45.192 104 57 0 188 291 3 106 1.22e-27 110
MS.gene050240.t1 AT3G11440 48.571 105 52 2 191 293 43 147 5.17e-27 111
MS.gene050240.t1 AT2G39880 43.519 108 61 0 188 295 47 154 5.65e-27 110
MS.gene050240.t1 AT3G11440 48.571 105 52 2 191 293 43 147 1.05e-26 111
MS.gene050240.t1 AT3G11440 48.571 105 52 2 191 293 43 147 1.05e-26 111
MS.gene050240.t1 AT3G11440 48.571 105 52 2 191 293 43 147 1.05e-26 111
MS.gene050240.t1 AT4G00540 50.000 104 49 1 191 291 103 206 1.10e-26 109
MS.gene050240.t1 AT4G00540 34.951 103 58 2 191 284 46 148 8.57e-12 66.2
MS.gene050240.t1 AT3G28470 48.454 97 49 1 191 286 14 110 1.62e-26 107
MS.gene050240.t1 AT4G00540 50.000 104 49 1 191 291 101 204 2.10e-26 109
MS.gene050240.t1 AT4G00540 34.951 103 58 2 191 284 44 146 1.16e-11 65.9
MS.gene050240.t1 AT1G69560 35.028 177 90 2 132 308 68 219 3.02e-26 107
MS.gene050240.t1 AT1G69560 35.028 177 90 2 132 308 84 235 3.05e-26 107
MS.gene050240.t1 AT1G26780 44.068 118 61 1 191 308 98 210 3.08e-26 106
MS.gene050240.t1 AT1G17950 43.750 112 60 1 191 299 5 116 4.92e-26 104
MS.gene050240.t1 AT4G33450 42.857 119 66 1 179 297 7 123 7.20e-26 104
MS.gene050240.t1 AT1G26780 44.068 118 61 1 191 308 98 210 8.22e-26 106
MS.gene050240.t1 AT4G28110 47.059 102 53 1 191 291 14 115 1.36e-25 104
MS.gene050240.t1 AT5G06100 46.667 105 54 2 191 293 34 138 2.45e-25 106
MS.gene050240.t1 AT5G06100 46.667 105 54 2 191 293 34 138 4.52e-25 106
MS.gene050240.t1 AT5G06100 46.667 105 54 2 191 293 34 138 4.52e-25 106
MS.gene050240.t1 AT5G06100 46.667 105 54 2 191 293 34 138 4.52e-25 106
MS.gene050240.t1 AT5G06100 46.667 105 54 2 191 293 34 138 4.52e-25 106
MS.gene050240.t1 AT2G32460 48.571 105 52 2 191 293 8 112 6.25e-25 105
MS.gene050240.t1 AT2G32460 48.571 105 52 2 191 293 20 124 7.29e-25 105
MS.gene050240.t1 AT4G38620 48.182 110 53 2 191 299 14 120 7.46e-25 102
MS.gene050240.t1 AT3G29020 45.545 101 55 0 191 291 65 165 8.22e-25 101
MS.gene050240.t1 AT4G05100 47.059 102 53 1 191 291 15 116 9.64e-25 102
MS.gene050240.t1 AT3G12720 43.137 102 57 1 191 291 24 125 1.03e-24 102
MS.gene050240.t1 AT2G26960 47.059 102 53 1 190 290 21 122 1.07e-24 104
MS.gene050240.t1 AT1G22640 46.078 102 54 1 191 291 14 115 1.13e-24 101
MS.gene050240.t1 AT4G21440 48.039 102 52 1 191 291 14 115 1.22e-24 103
MS.gene050240.t1 AT5G17800 46.535 101 54 0 191 291 93 193 1.23e-24 102
MS.gene050240.t1 AT5G59780 45.872 109 57 2 191 298 10 117 1.57e-24 100
MS.gene050240.t1 AT3G29020 45.545 101 55 0 191 291 67 167 2.14e-24 101
MS.gene050240.t1 AT3G13890 42.157 102 58 1 191 291 14 115 2.86e-24 102
MS.gene050240.t1 AT3G46130 46.789 109 56 2 191 298 11 118 2.94e-24 100
MS.gene050240.t1 AT3G30210 42.017 119 66 2 191 306 29 147 3.73e-24 100
MS.gene050240.t1 AT3G13890 39.640 111 57 1 191 291 14 124 4.73e-24 101
MS.gene050240.t1 AT4G09460 46.078 102 54 1 191 291 14 115 4.97e-24 99.0
MS.gene050240.t1 AT1G09540 43.636 110 58 2 191 299 14 120 5.47e-24 101
MS.gene050240.t1 AT1G57560 42.453 106 60 1 191 295 14 119 5.65e-24 99.8
MS.gene050240.t1 AT1G74430 42.453 106 60 1 191 295 14 119 6.29e-24 99.8
MS.gene050240.t1 AT5G10280 33.728 169 103 4 191 350 14 182 7.79e-24 100
MS.gene050240.t1 AT5G55020 44.554 101 55 1 191 290 28 128 7.83e-24 102
MS.gene050240.t1 AT4G26930 44.554 101 55 1 191 290 21 121 8.21e-24 101
MS.gene050240.t1 AT1G57560 42.453 106 60 1 191 295 14 119 9.68e-24 100
MS.gene050240.t1 AT2G47190 33.333 159 99 2 174 331 5 157 1.07e-23 99.0
MS.gene050240.t1 AT5G16770 45.098 102 55 1 191 291 14 115 1.61e-23 99.8
MS.gene050240.t1 AT5G16770 45.098 102 55 1 191 291 14 115 1.61e-23 99.8
MS.gene050240.t1 AT3G61250 47.917 96 49 1 191 285 14 109 1.73e-23 99.0
MS.gene050240.t1 AT5G12870 46.078 102 54 1 191 291 20 121 1.77e-23 98.6
MS.gene050240.t1 AT5G35550 42.342 111 61 2 182 291 9 117 1.96e-23 98.2
MS.gene050240.t1 AT5G16770 45.098 102 55 1 191 291 14 115 1.96e-23 99.8
MS.gene050240.t1 AT5G16770 45.098 102 55 1 191 291 14 115 1.96e-23 99.8
MS.gene050240.t1 AT4G01680 40.678 118 66 2 191 307 14 128 2.09e-23 97.4
MS.gene050240.t1 AT4G01680 40.678 118 66 2 191 307 14 128 2.25e-23 99.4
MS.gene050240.t1 AT5G26660 43.137 102 57 1 191 291 14 115 2.61e-23 99.4
MS.gene050240.t1 AT3G24310 40.336 119 70 1 191 308 20 138 3.44e-23 97.4
MS.gene050240.t1 AT4G13480 40.833 120 70 1 191 309 8 127 3.69e-23 97.4
MS.gene050240.t1 AT2G26950 42.202 109 54 2 191 294 18 122 3.95e-23 99.4
MS.gene050240.t1 AT5G54230 47.423 97 50 1 191 286 14 110 4.44e-23 98.2
MS.gene050240.t1 AT5G14750 44.330 97 53 1 191 286 18 114 4.64e-23 95.5
MS.gene050240.t1 AT5G65230 43.137 102 57 1 191 291 14 115 5.55e-23 97.8
MS.gene050240.t1 AT3G53200 43.750 112 59 3 191 300 11 120 6.18e-23 96.3
MS.gene050240.t1 AT4G12350 43.137 102 57 1 191 291 14 115 6.89e-23 97.1
MS.gene050240.t1 AT4G01680 37.692 130 65 2 191 307 14 140 7.20e-23 98.2
MS.gene050240.t1 AT3G27920 39.823 113 65 2 175 286 2 112 1.22e-22 95.1
MS.gene050240.t1 AT1G35515 42.727 110 59 2 191 299 14 120 1.42e-22 94.4
MS.gene050240.t1 AT5G56110 42.857 105 59 1 188 291 11 115 1.61e-22 96.7
MS.gene050240.t1 AT5G52600 41.593 113 64 2 191 301 14 126 1.72e-22 94.0
MS.gene050240.t1 AT3G02940 44.118 102 56 1 191 291 14 115 1.74e-22 96.7
MS.gene050240.t1 AT3G08500 45.098 102 55 1 191 291 32 133 1.79e-22 97.1
MS.gene050240.t1 AT1G73410 44.860 107 56 1 191 294 6 112 1.88e-22 94.0
MS.gene050240.t1 AT1G66230 46.939 98 49 2 191 286 14 110 1.90e-22 95.9
MS.gene050240.t1 AT2G16720 44.118 102 56 1 191 291 14 115 1.94e-22 95.5
MS.gene050240.t1 AT1G73410 44.860 107 56 1 191 294 6 112 2.19e-22 94.7
MS.gene050240.t1 AT3G02940 44.118 102 56 1 191 291 14 115 2.53e-22 96.3
MS.gene050240.t1 AT3G02940 44.118 102 56 1 191 291 14 115 2.53e-22 96.3
MS.gene050240.t1 AT1G34670 43.137 102 57 1 191 291 14 115 3.02e-22 96.7
MS.gene050240.t1 AT4G34990 44.118 102 56 1 191 291 14 115 3.40e-22 95.1
MS.gene050240.t1 AT4G22680 44.118 102 56 1 191 291 14 115 3.43e-22 94.7
MS.gene050240.t1 AT5G40330 42.268 97 55 1 191 286 14 110 4.97e-22 93.2
MS.gene050240.t1 AT1G18570 42.342 111 63 1 186 295 10 120 6.41e-22 95.5
MS.gene050240.t1 AT1G74080 47.423 97 50 1 191 286 14 110 9.47e-22 94.7
MS.gene050240.t1 AT4G17785 35.971 139 81 3 191 328 15 146 1.65e-21 94.7
MS.gene050240.t1 AT3G48920 41.667 120 66 3 173 290 3 120 1.66e-21 92.8
MS.gene050240.t1 AT4G17785 35.971 139 81 3 191 328 15 146 1.71e-21 94.4
MS.gene050240.t1 AT3G23250 44.792 96 50 2 191 284 14 108 1.75e-21 93.2
MS.gene050240.t1 AT1G63910 45.361 97 52 1 191 286 14 110 1.80e-21 94.7
MS.gene050240.t1 AT3G01530 43.564 101 56 1 191 290 27 127 2.03e-21 91.3
MS.gene050240.t1 AT3G60460 45.098 102 54 2 191 290 13 114 2.30e-21 93.2
MS.gene050240.t1 AT3G27810 45.263 95 51 1 191 284 22 116 2.78e-21 91.3
MS.gene050240.t1 AT1G25340 43.269 104 58 1 189 291 18 121 3.60e-21 92.4
MS.gene050240.t1 AT2G31180 38.053 113 69 1 191 302 14 126 4.16e-21 91.3
MS.gene050240.t1 AT5G07700 46.392 97 51 1 191 286 14 110 4.24e-21 93.2
MS.gene050240.t1 AT5G07700 46.392 97 51 1 191 286 14 110 4.24e-21 93.2
MS.gene050240.t1 AT1G25340 42.718 103 55 1 189 291 18 116 4.39e-21 92.0
MS.gene050240.t1 AT5G07690 47.423 97 50 1 191 286 14 110 4.79e-21 92.8
MS.gene050240.t1 AT3G13540 39.216 102 61 1 191 291 25 126 5.56e-21 90.9
MS.gene050240.t1 AT5G60890 44.118 102 56 1 191 291 14 115 6.22e-21 92.0
MS.gene050240.t1 AT1G25340 42.718 103 55 1 189 291 18 116 8.74e-21 91.7
MS.gene050240.t1 AT1G06180 43.158 95 53 1 191 284 14 108 1.02e-20 90.1
MS.gene050240.t1 AT5G40350 44.211 95 52 1 191 284 19 113 1.08e-20 89.4
MS.gene050240.t1 AT5G61420 46.392 97 51 1 191 286 14 110 1.16e-20 92.0
MS.gene050240.t1 AT5G15310 43.299 97 54 1 191 286 14 110 1.72e-20 89.7
MS.gene050240.t1 AT1G56160 42.718 103 57 2 186 286 10 112 1.82e-20 90.5
MS.gene050240.t1 AT5G39700 35.115 131 78 1 167 290 25 155 2.44e-20 87.8
MS.gene050240.t1 AT1G68320 41.176 102 59 1 191 291 21 122 3.85e-20 89.4
MS.gene050240.t1 AT5G15310 40.952 105 61 1 191 294 14 118 3.93e-20 90.1
MS.gene050240.t1 AT5G26660 42.857 91 41 1 201 291 5 84 4.00e-20 90.1
MS.gene050240.t1 AT5G15310 40.952 105 61 1 191 294 14 118 4.06e-20 90.1
MS.gene050240.t1 AT3G01140 43.750 96 53 1 191 285 14 109 4.98e-20 90.1
MS.gene050240.t1 AT5G62470 37.273 110 69 0 191 300 14 123 5.80e-20 90.1
MS.gene050240.t1 AT1G66370 38.739 111 67 1 191 300 10 120 6.10e-20 88.2
MS.gene050240.t1 AT3G01140 43.299 97 54 1 191 286 57 153 6.32e-20 90.5
MS.gene050240.t1 AT1G48000 42.857 105 58 2 191 294 34 137 1.87e-19 86.7
MS.gene050240.t1 AT1G14350 38.532 109 66 1 194 302 28 135 1.89e-19 89.4
MS.gene050240.t1 AT1G14350 38.532 109 66 1 194 302 28 135 1.89e-19 89.4
MS.gene050240.t1 AT5G57620 40.741 108 62 2 191 296 14 121 2.06e-19 88.2
MS.gene050240.t1 AT1G79180 40.566 106 60 2 191 294 16 120 2.38e-19 87.4
MS.gene050240.t1 AT4G25560 42.268 97 55 1 191 286 12 108 2.40e-19 87.0
MS.gene050240.t1 AT1G16490 39.450 109 63 2 191 297 16 123 2.83e-19 86.7
MS.gene050240.t1 AT3G62610 41.176 102 59 1 191 291 14 115 3.84e-19 87.4
MS.gene050240.t1 AT5G16600 45.918 98 50 2 191 286 14 110 4.22e-19 87.4
MS.gene050240.t1 AT3G47600 35.200 125 80 1 191 314 14 138 4.30e-19 87.4
MS.gene050240.t1 AT2G02820 33.884 121 73 1 194 314 33 146 4.64e-19 88.6
MS.gene050240.t1 AT2G02820 33.884 121 73 1 194 314 33 146 5.46e-19 88.2
MS.gene050240.t1 AT5G35550 48.000 75 39 0 224 298 53 127 8.07e-19 85.5
MS.gene050240.t1 AT2G02820 33.884 121 73 1 194 314 33 146 9.25e-19 86.3
MS.gene050240.t1 AT5G14340 38.235 102 62 1 191 291 26 127 1.17e-18 85.1
MS.gene050240.t1 AT5G62320 41.284 109 56 2 191 291 15 123 1.19e-18 84.3
MS.gene050240.t1 AT5G49330 39.216 102 61 1 191 291 14 115 1.68e-18 85.9
MS.gene050240.t1 AT2G47460 39.216 102 61 1 191 291 14 115 1.88e-18 85.9
MS.gene050240.t1 AT5G23000 41.748 103 58 2 191 291 14 116 1.96e-18 85.5
MS.gene050240.t1 AT5G62470 36.937 111 69 1 191 300 14 124 2.22e-18 85.5
MS.gene050240.t1 AT5G65790 38.843 121 70 3 191 307 14 134 2.31e-18 85.5
MS.gene050240.t1 AT1G18710 33.962 106 69 1 191 295 14 119 2.87e-18 84.0
MS.gene050240.t1 AT1G74650 41.237 97 56 1 191 286 14 110 3.67e-18 84.7
MS.gene050240.t1 AT5G14750 47.619 63 33 0 224 286 18 80 7.33e-18 80.5
MS.gene050240.t1 AT3G28910 40.625 96 56 1 191 285 14 109 8.33e-18 83.6
MS.gene050240.t1 AT4G37780 38.835 103 61 2 191 291 14 116 9.87e-18 83.2
MS.gene050240.t1 AT3G53200 49.351 77 38 1 224 300 12 87 1.07e-17 80.9
MS.gene050240.t1 AT5G52260 38.760 129 75 3 189 315 12 138 1.21e-17 82.0
MS.gene050240.t1 AT3G12820 38.393 112 67 2 186 295 10 121 1.25e-17 81.6
MS.gene050240.t1 AT5G49620 36.296 135 80 3 162 295 3 132 1.53e-17 82.4
MS.gene050240.t1 AT3G49690 40.909 110 61 3 191 296 14 123 2.81e-17 81.6
MS.gene050240.t1 AT1G08810 40.206 97 57 1 191 286 14 110 4.94e-17 80.5
MS.gene050240.t1 AT1G66380 43.299 97 54 1 191 286 10 106 5.17e-17 77.4
MS.gene050240.t1 AT2G37630 36.937 111 67 1 193 300 6 116 2.15e-16 79.7
MS.gene050240.t1 AT1G56650 42.268 97 55 1 191 286 10 106 3.00e-16 77.8
MS.gene050240.t1 AT3G06490 37.705 122 73 3 175 295 6 125 3.22e-16 79.0
MS.gene050240.t1 AT3G18100 41.667 96 54 2 190 284 494 588 3.60e-16 80.5
MS.gene050240.t1 AT3G18100 40.426 94 56 0 191 284 546 639 7.34e-15 76.3
MS.gene050240.t1 AT3G18100 41.667 96 54 2 190 284 446 540 4.22e-16 80.1
MS.gene050240.t1 AT3G18100 40.426 94 56 0 191 284 498 591 8.15e-15 76.3
MS.gene050240.t1 AT3G18100 41.667 96 54 2 190 284 281 375 4.35e-16 79.7
MS.gene050240.t1 AT3G18100 40.426 94 56 0 191 284 333 426 7.55e-15 76.3
MS.gene050240.t1 AT3G18100 41.667 96 54 2 190 284 333 427 4.94e-16 79.7
MS.gene050240.t1 AT3G18100 40.426 94 56 0 191 284 385 478 8.40e-15 75.9
MS.gene050240.t1 AT5G59780 46.667 75 39 1 224 298 23 96 5.38e-16 76.3
MS.gene050240.t1 AT3G27810 52.459 61 29 0 224 284 7 67 5.44e-16 75.5
MS.gene050240.t1 AT1G79180 32.609 138 59 3 191 294 16 153 6.26e-16 78.2
MS.gene050240.t1 AT3G12820 45.833 72 39 0 224 295 2 73 7.48e-16 75.5
MS.gene050240.t1 AT1G66390 43.299 97 54 1 191 286 10 106 9.34e-16 76.3
MS.gene050240.t1 AT3G46130 46.667 75 39 1 224 298 23 96 1.14e-15 75.9
MS.gene050240.t1 AT3G46130 46.667 75 39 1 224 298 13 86 1.36e-15 75.5
MS.gene050240.t1 AT1G22640 50.820 61 30 0 235 295 2 62 3.14e-15 73.9
MS.gene050240.t1 AT5G40350 50.820 61 30 0 224 284 8 68 3.16e-15 73.2
MS.gene050240.t1 AT3G47600 36.792 106 65 1 211 314 27 132 3.65e-15 75.9
MS.gene050240.t1 AT2G36890 36.893 103 63 2 191 291 14 116 1.23e-14 73.9
MS.gene050240.t1 AT2G36890 36.893 103 63 2 191 291 55 157 1.84e-14 73.9
MS.gene050240.t1 AT5G49620 32.886 149 80 4 162 295 3 146 3.66e-14 72.8
MS.gene050240.t1 AT1G71030 39.706 68 41 0 227 294 5 72 6.69e-14 69.7
MS.gene050240.t1 AT1G71030 39.706 68 41 0 227 294 19 86 7.38e-14 70.1
MS.gene050240.t1 AT5G14750 36.765 68 43 0 235 302 2 69 1.62e-12 64.7
MS.gene050240.t1 AT5G14750 36.765 68 43 0 235 302 2 69 1.62e-12 64.7
MS.gene050240.t1 AT1G66380 49.206 63 32 0 224 286 11 73 5.80e-12 62.0
MS.gene050240.t1 AT3G23250 50.000 50 25 0 235 284 2 51 1.50e-11 63.9
MS.gene050240.t1 AT1G14350 42.254 71 40 1 232 302 23 92 5.46e-11 63.9
MS.gene050240.t1 AT1G14350 42.254 71 40 1 232 302 23 92 5.46e-11 63.9

Find 94 sgRNAs with CRISPR-Local

Find 195 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTCTGAGCTTTCAAAATT+TGG 0.023881 7.1:-53143443 None:intergenic
TTAACACTAGCAAAGGAATT+TGG 0.146907 7.1:+53140505 MS.gene050240:CDS
GGTTCTTCCTCTTGGCATTT+TGG 0.165983 7.1:-53143344 None:intergenic
GTATGACTTCCATCTTATTA+TGG 0.228235 7.1:-53140473 None:intergenic
TAAGTTGATTGCATTGATTT+TGG 0.242609 7.1:-53140281 None:intergenic
GAATCCTCTTCAGCCGCTTT+TGG 0.249031 7.1:-53140722 None:intergenic
GTGGTTCTTGATGGAGTTCT+TGG 0.268414 7.1:-53143301 None:intergenic
TCCAATTGGTGGATCACTTT+GGG 0.286919 7.1:+53140971 MS.gene050240:CDS
CTTTCATGCAATGATGGAAT+TGG 0.295338 7.1:+53140657 MS.gene050240:CDS
ACTTCCATCTTATTATGGTT+TGG 0.326900 7.1:-53140468 None:intergenic
GGCGTTCCAGTGGTTCTTGA+TGG 0.329167 7.1:-53143310 None:intergenic
TAACACTAGCAAAGGAATTT+GGG 0.340692 7.1:+53140506 MS.gene050240:CDS
TTGCAGGGTTCTTGTCCAAT+TGG 0.370017 7.1:+53140957 MS.gene050240:intron
TATGATTTCAGAAGGATTCA+TGG 0.372361 7.1:+53143190 MS.gene050240:intron
GATGGAGTTCTTGGTGCGTC+CGG 0.393811 7.1:-53143292 None:intergenic
CCATCTTCGACCAGACATTA+AGG 0.396221 7.1:+53141068 MS.gene050240:CDS
TGGTTTGGTGCAAAGATCAT+TGG 0.405502 7.1:-53140453 None:intergenic
TTTCATAAACTTAGCAATAC+AGG 0.405950 7.1:-53141007 None:intergenic
TCAAAGGGAATGGGCTGATG+GGG 0.411945 7.1:-53140362 None:intergenic
CAGGGTTCTTGTCCAATTGG+TGG 0.414077 7.1:+53140960 MS.gene050240:intron
AAGTTTATGAAAGGCAGAAC+TGG 0.415305 7.1:+53141018 MS.gene050240:CDS
CTTACCCCGGTTCTTCCTCT+TGG 0.419409 7.1:-53143352 None:intergenic
GTCCAATTGGTGGATCACTT+TGG 0.421631 7.1:+53140970 MS.gene050240:CDS
AAAATGCCAAGAGGAAGAAC+CGG 0.423904 7.1:+53143346 MS.gene050240:CDS
TACCCACAAATTTCGTTCTC+TGG 0.427488 7.1:-53143494 None:intergenic
ATCACTTTGGGCTAAGAAAA+TGG 0.428054 7.1:+53140983 MS.gene050240:CDS
AAATCAATGCAATCAACTTA+AGG 0.438416 7.1:+53140284 MS.gene050240:CDS
ATCGAAGCTCACAAAATAGT+TGG 0.446030 7.1:+53143237 MS.gene050240:CDS
TCAATTAATCCTGAGCTTCA+AGG 0.447008 7.1:+53140630 MS.gene050240:CDS
GAAAGATCTCCTTGAAGCTC+AGG 0.449302 7.1:-53140639 None:intergenic
TACCGATGGGTTGGGATCAA+AGG 0.460025 7.1:-53140378 None:intergenic
GCCCAAAGTGATCCACCAAT+TGG 0.461579 7.1:-53140972 None:intergenic
ATCAAAGGGAATGGGCTGAT+GGG 0.471371 7.1:-53140363 None:intergenic
CAAGGATCTCAATCAAATCA+AGG 0.475188 7.1:+53140767 MS.gene050240:CDS
CAATGCTAAGGAAGTTGAAA+AGG 0.477855 7.1:+53143379 MS.gene050240:CDS
GATCAAAGGGAATGGGCTGA+TGG 0.486143 7.1:-53140364 None:intergenic
TAGCCTTGTACCGATGGGTT+GGG 0.487014 7.1:-53140386 None:intergenic
ATGGAGTTCTTGGTGCGTCC+GGG 0.488149 7.1:-53143291 None:intergenic
TGGTGAAACTTCACAACCTC+GGG 0.489214 7.1:+53140557 MS.gene050240:CDS
CGCCAGAGAACGAAATTTGT+GGG 0.494750 7.1:+53143492 MS.gene050240:CDS
TGTAAGTAGCCTTGTACCGA+TGG 0.496226 7.1:-53140392 None:intergenic
GGAGATCTTTCATGCAATGA+TGG 0.500133 7.1:+53140651 MS.gene050240:CDS
TAAGGAACATCCTTTGAATG+AGG 0.504222 7.1:+53140302 MS.gene050240:CDS
CAAAGGGAATGGGCTGATGG+GGG 0.505154 7.1:-53140361 None:intergenic
ATAATGGTTCCTTCTCAACT+AGG 0.506235 7.1:+53140213 None:intergenic
AAGAATGAGACCTTAATGTC+TGG 0.513472 7.1:-53141078 None:intergenic
ACCGATGGGTTGGGATCAAA+GGG 0.517315 7.1:-53140377 None:intergenic
GATCCCAACCCATCGGTACA+AGG 0.525099 7.1:+53140383 MS.gene050240:CDS
ACAAGGCTACTTACACCAAT+GGG 0.528761 7.1:+53140400 MS.gene050240:CDS
CCTTAATGTCTGGTCGAAGA+TGG 0.530937 7.1:-53141068 None:intergenic
ACAAAATAGTTGGAAACAAG+TGG 0.538861 7.1:+53143247 MS.gene050240:CDS
GTGTCCAAAAGCGGCTGAAG+AGG 0.542775 7.1:+53140718 MS.gene050240:CDS
TGGGTTGGGATCAAAGGGAA+TGG 0.546058 7.1:-53140372 None:intergenic
TGTATTGCTAAGTTTATGAA+AGG 0.547549 7.1:+53141009 MS.gene050240:CDS
ACGCCAGAGAACGAAATTTG+TGG 0.548833 7.1:+53143491 MS.gene050240:CDS
AAATCCAGAGAAAATGATCA+AGG 0.549710 7.1:+53140684 MS.gene050240:CDS
AGATTTGAACCTAGTTGAGA+AGG 0.550181 7.1:-53140222 None:intergenic
TATGTGGTGTAATGTGATGT+TGG 0.551218 7.1:-53140252 None:intergenic
TGCACCAAACCATAATAAGA+TGG 0.552990 7.1:+53140464 MS.gene050240:CDS
AAATGCCAAGAGGAAGAACC+GGG 0.554441 7.1:+53143347 MS.gene050240:CDS
TACAAGGCTACTTACACCAA+TGG 0.554628 7.1:+53140399 MS.gene050240:CDS
GAAATTTCAAGAAGATTGCC+CGG 0.556254 7.1:+53143273 MS.gene050240:CDS
GGGTTGGGATCAAAGGGAAT+GGG 0.559427 7.1:-53140371 None:intergenic
AAATTCTCTCTGATACCCAT+TGG 0.560239 7.1:-53140415 None:intergenic
AGAACTCCATCAAGAACCAC+TGG 0.561205 7.1:+53143304 MS.gene050240:CDS
GTAGCCTTGTACCGATGGGT+TGG 0.569240 7.1:-53140387 None:intergenic
TCAATCAAATCAAGGGACAA+TGG 0.573893 7.1:+53140775 MS.gene050240:CDS
GGCGCTTAGTGGCGTTCCAG+TGG 0.575961 7.1:-53143320 None:intergenic
GCTAGTGATGGTGATGGAGA+GGG 0.580879 7.1:-53140585 None:intergenic
TTAGCATTGAACTCTTACCC+CGG 0.580900 7.1:-53143365 None:intergenic
TCCCTTTGATCCCAACCCAT+CGG 0.582216 7.1:+53140376 MS.gene050240:CDS
GGGGTAAGAGTTCAATGCTA+AGG 0.590527 7.1:+53143367 MS.gene050240:CDS
AGCTAGTGATGGTGATGGAG+AGG 0.591064 7.1:-53140586 None:intergenic
GAAAACAGTGCAGAGAGAGA+TGG 0.592975 7.1:+53141040 MS.gene050240:CDS
GGTCGTCTTAACACTAGCAA+AGG 0.596222 7.1:+53140498 MS.gene050240:CDS
GGATTCATGGTCTGAAGAGG+AGG 0.599345 7.1:+53143203 MS.gene050240:CDS
GATGTAGTATTCTACGAGCA+TGG 0.600749 7.1:+53143406 MS.gene050240:CDS
GAAGGATTCATGGTCTGAAG+AGG 0.605924 7.1:+53143200 MS.gene050240:intron
AAGGATCTCAATCAAATCAA+GGG 0.611928 7.1:+53140768 MS.gene050240:CDS
GGGACAATGGACTTCAAATG+AGG 0.612328 7.1:+53140788 MS.gene050240:CDS
AATAAGATGGAAGTCATACA+TGG 0.614721 7.1:+53140477 MS.gene050240:CDS
TGATGGTTAACCTCATTCAA+AGG 0.620174 7.1:-53140312 None:intergenic
ATGGTGAAACTTCACAACCT+CGG 0.620631 7.1:+53140556 MS.gene050240:CDS
GTGGTGTAATGTGATGTTGG+AGG 0.633563 7.1:-53140249 None:intergenic
TCATAAGCTAGTGATGGTGA+TGG 0.640944 7.1:-53140591 None:intergenic
AATGGACTTCAAATGAGGAT+CGG 0.644601 7.1:+53140793 MS.gene050240:CDS
TCGTGCTCAGTGTCCAAAAG+CGG 0.654264 7.1:+53140709 MS.gene050240:CDS
GAATAATGAAATTCAACACA+AGG 0.657330 7.1:+53140749 MS.gene050240:CDS
AGCGCCGCCAAAATGCCAAG+AGG 0.692200 7.1:+53143337 MS.gene050240:CDS
GTAAGTAGCCTTGTACCGAT+GGG 0.696279 7.1:-53140391 None:intergenic
ATGCTCGTAGAATACTACAT+CGG 0.697933 7.1:-53143404 None:intergenic
TGTGCATCATAAGCTAGTGA+TGG 0.698578 7.1:-53140597 None:intergenic
GATGGAGAGGGACTTACCCG+AGG 0.705163 7.1:-53140573 None:intergenic
AATGCCAAGAGGAAGAACCG+GGG 0.791379 7.1:+53143348 MS.gene050240:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTCATAAATACTTAATAAA+CGG - chr7.1:53142619-53142638 None:intergenic 10.0%
!! TGTTAATTATATTTAATGTA+AGG - chr7.1:53143142-53143161 None:intergenic 10.0%
!!! AATTATTTTATATTTTTGCA+GGG + chr7.1:53140942-53140961 MS.gene050240:intron 10.0%
!!! TAATTATTTTATATTTTTGC+AGG + chr7.1:53140941-53140960 MS.gene050240:intron 10.0%
!!! TCTTTATCTATTTTTAATTT+TGG + chr7.1:53141946-53141965 MS.gene050240:intron 10.0%
!!! TTTTAATGAATTAAAAAGAA+AGG - chr7.1:53141864-53141883 None:intergenic 10.0%
!! AATAAAACGAAAACAAATTA+TGG + chr7.1:53141236-53141255 MS.gene050240:intron 15.0%
!! ACAAAAAATTTCTTTCAATA+TGG + chr7.1:53140537-53140556 MS.gene050240:CDS 15.0%
!! ATTTACATAGATTTATTAAG+CGG + chr7.1:53142841-53142860 MS.gene050240:intron 15.0%
!! CAATAAAAAAGTAATAGATA+AGG - chr7.1:53141684-53141703 None:intergenic 15.0%
!! CTATTAATTAAAAACAGTTA+TGG - chr7.1:53141588-53141607 None:intergenic 15.0%
!! TAGTTTAATATTCATTTCAT+TGG + chr7.1:53141346-53141365 MS.gene050240:intron 15.0%
!!! ATGTGTTTATGATTTTATAA+AGG + chr7.1:53141298-53141317 MS.gene050240:intron 15.0%
!!! CAATTTTATATAATCAATGT+AGG - chr7.1:53142054-53142073 None:intergenic 15.0%
!!! TCAAATATTTTATCATACAT+TGG + chr7.1:53142719-53142738 MS.gene050240:intron 15.0%
!!! TGTTTTTAATTAATAGTTGA+GGG + chr7.1:53141592-53141611 MS.gene050240:intron 15.0%
!!! TTGTTTAAAATCTAATATTG+AGG + chr7.1:53141900-53141919 MS.gene050240:intron 15.0%
!!! TTTAACAAGAGATTTTTTAA+GGG + chr7.1:53142870-53142889 MS.gene050240:intron 15.0%
!! AAAAAAATACCTACGAAAAA+AGG - chr7.1:53141628-53141647 None:intergenic 20.0%
!! AAAAAATACCTACGAAAAAA+GGG - chr7.1:53141627-53141646 None:intergenic 20.0%
!! AATTTGTAAGTATTTGATAG+AGG + chr7.1:53142155-53142174 MS.gene050240:intron 20.0%
!! ATGAATTAAAAAGAAAGGTA+AGG - chr7.1:53141859-53141878 None:intergenic 20.0%
!! GAAAGAGTTAAGTTATAAAA+AGG - chr7.1:53142200-53142219 None:intergenic 20.0%
!! TCCAAAAATTGATTAGAAAA+AGG - chr7.1:53141767-53141786 None:intergenic 20.0%
!! TCTATCAAATACTTACAAAT+TGG - chr7.1:53142156-53142175 None:intergenic 20.0%
!! TTAAACTATACTAAATTTGC+AGG + chr7.1:53142773-53142792 MS.gene050240:intron 20.0%
!! TTATGAAATTGTGGTATATA+TGG - chr7.1:53143000-53143019 None:intergenic 20.0%
!!! ATAGATGAATTTTACACAAA+TGG + chr7.1:53141978-53141997 MS.gene050240:intron 20.0%
!!! CTGTTTTTAATTAATAGTTG+AGG + chr7.1:53141591-53141610 MS.gene050240:intron 20.0%
!!! CTTTAACAAGAGATTTTTTA+AGG + chr7.1:53142869-53142888 MS.gene050240:intron 20.0%
!!! GTTTTTAATTAATAGTTGAG+GGG + chr7.1:53141593-53141612 MS.gene050240:intron 20.0%
!!! TCCTTTTTCTAATCAATTTT+TGG + chr7.1:53141763-53141782 MS.gene050240:intron 20.0%
!!! TCTATATTTGTCATTTCAAA+TGG - chr7.1:53142821-53142840 None:intergenic 20.0%
! AAAATAGACAACTAAAGTAG+TGG - chr7.1:53141401-53141420 None:intergenic 25.0%
! AAATCAATGCAATCAACTTA+AGG + chr7.1:53140284-53140303 MS.gene050240:CDS 25.0%
! AACAGTTATGGATAAAACTT+AGG - chr7.1:53141576-53141595 None:intergenic 25.0%
! AGAATCAGTCATTACTAAAT+TGG + chr7.1:53143101-53143120 MS.gene050240:intron 25.0%
! ATAGATAAGGAAATAAAGAG+TGG - chr7.1:53141671-53141690 None:intergenic 25.0%
! CTAACAAAAACATATGTGAA+AGG - chr7.1:53142028-53142047 None:intergenic 25.0%
! CTTACAAATGAGACATAAAA+GGG - chr7.1:53142247-53142266 None:intergenic 25.0%
! GAATAATGAAATTCAACACA+AGG + chr7.1:53140749-53140768 MS.gene050240:CDS 25.0%
! TCTTACAAATGAGACATAAA+AGG - chr7.1:53142248-53142267 None:intergenic 25.0%
! TGTATTGCTAAGTTTATGAA+AGG + chr7.1:53141009-53141028 MS.gene050240:CDS 25.0%
! TTGGTCTATATGTGTTAAAT+TGG + chr7.1:53142921-53142940 MS.gene050240:intron 25.0%
! TTGTTATGTATGATTTCAGA+AGG + chr7.1:53143182-53143201 MS.gene050240:intron 25.0%
! TTTCATAAACTTAGCAATAC+AGG - chr7.1:53141010-53141029 None:intergenic 25.0%
! TTTCTTGCTTTATGAAATTG+TGG - chr7.1:53143009-53143028 None:intergenic 25.0%
!! ACAAATTACTTCTTGATGAT+AGG - chr7.1:53141459-53141478 None:intergenic 25.0%
!!! AAGAGTGTTATTCATACAAT+TGG + chr7.1:53142902-53142921 MS.gene050240:intron 25.0%
!!! ATTATTTACCCTTTTTTCGT+AGG + chr7.1:53141616-53141635 MS.gene050240:intron 25.0%
!!! TAAGTTGATTGCATTGATTT+TGG - chr7.1:53140284-53140303 None:intergenic 25.0%
!!! TTGATTTTGGTACAAATATG+TGG - chr7.1:53140271-53140290 None:intergenic 25.0%
AAATCCAGAGAAAATGATCA+AGG + chr7.1:53140684-53140703 MS.gene050240:CDS 30.0%
AAGGATCTCAATCAAATCAA+GGG + chr7.1:53140768-53140787 MS.gene050240:CDS 30.0%
AATAAGATGGAAGTCATACA+TGG + chr7.1:53140477-53140496 MS.gene050240:CDS 30.0%
ACAAAATAGTTGGAAACAAG+TGG + chr7.1:53143247-53143266 MS.gene050240:CDS 30.0%
ACTTCCATCTTATTATGGTT+TGG - chr7.1:53140471-53140490 None:intergenic 30.0%
ATAAAAGGGAAAGATTGACT+TGG - chr7.1:53142233-53142252 None:intergenic 30.0%
ATATAAGCCATGTAAGCTTA+TGG + chr7.1:53142678-53142697 MS.gene050240:intron 30.0%
ATCATACATAACAATGTGTG+TGG - chr7.1:53143176-53143195 None:intergenic 30.0%
CATGAGTTTCTTTCACTTAA+TGG + chr7.1:53142093-53142112 MS.gene050240:intron 30.0%
GATAGAGAATCATAAACAAG+AGG - chr7.1:53142971-53142990 None:intergenic 30.0%
GTAATTAGAAACAGAGCATA+TGG - chr7.1:53142477-53142496 None:intergenic 30.0%
GTATGACTTCCATCTTATTA+TGG - chr7.1:53140476-53140495 None:intergenic 30.0%
TAACACTAGCAAAGGAATTT+GGG + chr7.1:53140506-53140525 MS.gene050240:CDS 30.0%
TATGATTTCAGAAGGATTCA+TGG + chr7.1:53143190-53143209 MS.gene050240:intron 30.0%
TCCTATCAAAATAATTCCTG+TGG + chr7.1:53142446-53142465 MS.gene050240:intron 30.0%
TTAACACTAGCAAAGGAATT+TGG + chr7.1:53140505-53140524 MS.gene050240:CDS 30.0%
!! TGTTTTTGTCCTTTATTCGA+GGG + chr7.1:53141708-53141727 MS.gene050240:intron 30.0%
!!! ATTTTTGGAGCATGTGATAT+AGG + chr7.1:53141778-53141797 MS.gene050240:intron 30.0%
!!! GGAATTATTTTGATAGGAAG+CGG - chr7.1:53142444-53142463 None:intergenic 30.0%
!!! TCCACAGGAATTATTTTGAT+AGG - chr7.1:53142450-53142469 None:intergenic 30.0%
!!! TGATTTTAGAACTGAAGGTT+TGG + chr7.1:53143466-53143485 MS.gene050240:CDS 30.0%
AAATTCTCTCTGATACCCAT+TGG - chr7.1:53140418-53140437 None:intergenic 35.0%
AAGAATGAGACCTTAATGTC+TGG - chr7.1:53141081-53141100 None:intergenic 35.0%
AAGTTTATGAAAGGCAGAAC+TGG + chr7.1:53141018-53141037 MS.gene050240:CDS 35.0%
AGAGGTGAAAATTTGAACTC+AGG + chr7.1:53142173-53142192 MS.gene050240:intron 35.0%
AGATATTCAACTTCACGTGT+TGG - chr7.1:53142658-53142677 None:intergenic 35.0%
AGATTTGAACCTAGTTGAGA+AGG - chr7.1:53140225-53140244 None:intergenic 35.0%
ATAGCATGTATTTGTTCCCA+CGG - chr7.1:53143061-53143080 None:intergenic 35.0%
ATCACTTTGGGCTAAGAAAA+TGG + chr7.1:53140983-53141002 MS.gene050240:CDS 35.0%
ATCGAAGCTCACAAAATAGT+TGG + chr7.1:53143237-53143256 MS.gene050240:CDS 35.0%
ATGCTCGTAGAATACTACAT+CGG - chr7.1:53143407-53143426 None:intergenic 35.0%
CAAGGATCTCAATCAAATCA+AGG + chr7.1:53140767-53140786 MS.gene050240:CDS 35.0%
CAATGCTAAGGAAGTTGAAA+AGG + chr7.1:53143379-53143398 MS.gene050240:CDS 35.0%
CTCTCTGAGCTTTCAAAATT+TGG - chr7.1:53143446-53143465 None:intergenic 35.0%
GAAATTTCAAGAAGATTGCC+CGG + chr7.1:53143273-53143292 MS.gene050240:CDS 35.0%
TAAGGAACATCCTTTGAATG+AGG + chr7.1:53140302-53140321 MS.gene050240:CDS 35.0%
TATGTGGTGTAATGTGATGT+TGG - chr7.1:53140255-53140274 None:intergenic 35.0%
TCAATCAAATCAAGGGACAA+TGG + chr7.1:53140775-53140794 MS.gene050240:CDS 35.0%
TCAATTAATCCTGAGCTTCA+AGG + chr7.1:53140630-53140649 MS.gene050240:CDS 35.0%
TGATGGTTAACCTCATTCAA+AGG - chr7.1:53140315-53140334 None:intergenic 35.0%
TGCACCAAACCATAATAAGA+TGG + chr7.1:53140464-53140483 MS.gene050240:CDS 35.0%
TTGCAGAAAAACTAGAGTGA+TGG - chr7.1:53140332-53140351 None:intergenic 35.0%
! AAAAGAAAGGTAAGGCATCA+AGG - chr7.1:53141851-53141870 None:intergenic 35.0%
! AAAGAAAGGTAAGGCATCAA+GGG - chr7.1:53141850-53141869 None:intergenic 35.0%
! AAGGAAAAGAGTGTACAAGA+AGG - chr7.1:53141748-53141767 None:intergenic 35.0%
! AATGGACTTCAAATGAGGAT+CGG + chr7.1:53140793-53140812 MS.gene050240:CDS 35.0%
! AGGAAAAGAGTGTACAAGAA+GGG - chr7.1:53141747-53141766 None:intergenic 35.0%
! CTTTCATGCAATGATGGAAT+TGG + chr7.1:53140657-53140676 MS.gene050240:CDS 35.0%
! GAATCCTTGATCATTTTCTC+TGG - chr7.1:53140691-53140710 None:intergenic 35.0%
! GTTTTTGTCCTTTATTCGAG+GGG + chr7.1:53141709-53141728 MS.gene050240:intron 35.0%
!!! CTGTTTTTGTCCTTTATTCG+AGG + chr7.1:53141707-53141726 MS.gene050240:intron 35.0%
!!! GAGAGTGATTTTAGAACTGA+AGG + chr7.1:53143461-53143480 MS.gene050240:CDS 35.0%
!!! TCACTCTAGTTTTTCTGCAA+TGG + chr7.1:53140332-53140351 MS.gene050240:CDS 35.0%
AAAATGCCAAGAGGAAGAAC+CGG + chr7.1:53143346-53143365 MS.gene050240:CDS 40.0%
AAACCAAACCCCTCGAATAA+AGG - chr7.1:53141720-53141739 None:intergenic 40.0%
ACAAGGCTACTTACACCAAT+GGG + chr7.1:53140400-53140419 MS.gene050240:CDS 40.0%
AGAGCATATGGTTATTCCAC+AGG - chr7.1:53142465-53142484 None:intergenic 40.0%
ATGGTGAAACTTCACAACCT+CGG + chr7.1:53140556-53140575 MS.gene050240:CDS 40.0%
GATGTAGTATTCTACGAGCA+TGG + chr7.1:53143406-53143425 MS.gene050240:CDS 40.0%
GGAGATCTTTCATGCAATGA+TGG + chr7.1:53140651-53140670 MS.gene050240:CDS 40.0%
TACAAGGCTACTTACACCAA+TGG + chr7.1:53140399-53140418 MS.gene050240:CDS 40.0%
TACCCACAAATTTCGTTCTC+TGG - chr7.1:53143497-53143516 None:intergenic 40.0%
TGATCGACCATAAGCTTACA+TGG - chr7.1:53142688-53142707 None:intergenic 40.0%
TGGAGCATGTGATATAGGAT+GGG + chr7.1:53141783-53141802 MS.gene050240:intron 40.0%
TGTGCATCATAAGCTAGTGA+TGG - chr7.1:53140600-53140619 None:intergenic 40.0%
TTGGAGCATGTGATATAGGA+TGG + chr7.1:53141782-53141801 MS.gene050240:intron 40.0%
! AAGAAAGGTAAGGCATCAAG+GGG - chr7.1:53141849-53141868 None:intergenic 40.0%
! CCAAGATTTTGTTCTCCTCA+CGG + chr7.1:53143030-53143049 MS.gene050240:intron 40.0%
! GGAAAAGAGTGTACAAGAAG+GGG - chr7.1:53141746-53141765 None:intergenic 40.0%
! TCATAAGCTAGTGATGGTGA+TGG - chr7.1:53140594-53140613 None:intergenic 40.0%
! TCCAATTGGTGGATCACTTT+GGG + chr7.1:53140971-53140990 MS.gene050240:CDS 40.0%
! TTAGCATTGAACTCTTACCC+CGG - chr7.1:53143368-53143387 None:intergenic 40.0%
! TTTATTCGAGGGGTTTGGTT+TGG + chr7.1:53141719-53141738 MS.gene050240:intron 40.0%
!! AAAGGGAAAGATTGACTTGG+TGG - chr7.1:53142230-53142249 None:intergenic 40.0%
!! TGGTTTGGTGCAAAGATCAT+TGG - chr7.1:53140456-53140475 None:intergenic 40.0%
AAATGCCAAGAGGAAGAACC+GGG + chr7.1:53143347-53143366 MS.gene050240:CDS 45.0%
ACGCCAGAGAACGAAATTTG+TGG + chr7.1:53143491-53143510 MS.gene050240:CDS 45.0%
AGAACTCCATCAAGAACCAC+TGG + chr7.1:53143304-53143323 MS.gene050240:CDS 45.0%
CCATCTTCGACCAGACATTA+AGG + chr7.1:53141068-53141087 MS.gene050240:CDS 45.0%
CCGTGAGGAGAACAAAATCT+TGG - chr7.1:53143033-53143052 None:intergenic 45.0%
CCTTAATGTCTGGTCGAAGA+TGG - chr7.1:53141071-53141090 None:intergenic 45.0%
CGCCAGAGAACGAAATTTGT+GGG + chr7.1:53143492-53143511 MS.gene050240:CDS 45.0%
GAAAACAGTGCAGAGAGAGA+TGG + chr7.1:53141040-53141059 MS.gene050240:CDS 45.0%
GAAAGATCTCCTTGAAGCTC+AGG - chr7.1:53140642-53140661 None:intergenic 45.0%
GAAGGATTCATGGTCTGAAG+AGG + chr7.1:53143200-53143219 MS.gene050240:intron 45.0%
GGAGCATGTGATATAGGATG+GGG + chr7.1:53141784-53141803 MS.gene050240:intron 45.0%
GGGGTAAGAGTTCAATGCTA+AGG + chr7.1:53143367-53143386 MS.gene050240:CDS 45.0%
GGTCGTCTTAACACTAGCAA+AGG + chr7.1:53140498-53140517 MS.gene050240:CDS 45.0%
GTGGTGTAATGTGATGTTGG+AGG - chr7.1:53140252-53140271 None:intergenic 45.0%
GTGGTTCTTGATGGAGTTCT+TGG - chr7.1:53143304-53143323 None:intergenic 45.0%
TGGTGAAACTTCACAACCTC+GGG + chr7.1:53140557-53140576 MS.gene050240:CDS 45.0%
TGTCCTTTATTCGAGGGGTT+TGG + chr7.1:53141714-53141733 MS.gene050240:intron 45.0%
TTGCAGGGTTCTTGTCCAAT+TGG + chr7.1:53140957-53140976 MS.gene050240:intron 45.0%
! GGGACAATGGACTTCAAATG+AGG + chr7.1:53140788-53140807 MS.gene050240:CDS 45.0%
! GGTTCTTCCTCTTGGCATTT+TGG - chr7.1:53143347-53143366 None:intergenic 45.0%
! GTCCAATTGGTGGATCACTT+TGG + chr7.1:53140970-53140989 MS.gene050240:CDS 45.0%
! TCTTCCTCTTGGCATTTTGG+CGG - chr7.1:53143344-53143363 None:intergenic 45.0%
!! AAAGATTGACTTGGTGGCTG+AGG - chr7.1:53142224-53142243 None:intergenic 45.0%
!! ATCAAAGGGAATGGGCTGAT+GGG - chr7.1:53140366-53140385 None:intergenic 45.0%
!! GTAAGTAGCCTTGTACCGAT+GGG - chr7.1:53140394-53140413 None:intergenic 45.0%
!! TGTAAGTAGCCTTGTACCGA+TGG - chr7.1:53140395-53140414 None:intergenic 45.0%
!! AAAAAAAATAATAATAATCA+AGG - chr7.1:53140888-53140907 None:intergenic 5.0%
AATGCCAAGAGGAAGAACCG+GGG + chr7.1:53143348-53143367 MS.gene050240:CDS 50.0%
ATATAGGATGGGGACCGCTA+TGG + chr7.1:53141794-53141813 MS.gene050240:intron 50.0%
CAGGGTTCTTGTCCAATTGG+TGG + chr7.1:53140960-53140979 MS.gene050240:intron 50.0%
GCATGTATTTGTTCCCACGG+TGG - chr7.1:53143058-53143077 None:intergenic 50.0%
GCCCAAAGTGATCCACCAAT+TGG - chr7.1:53140975-53140994 None:intergenic 50.0%
GGATTCATGGTCTGAAGAGG+AGG + chr7.1:53143203-53143222 MS.gene050240:CDS 50.0%
GGGTTGGGATCAAAGGGAAT+GGG - chr7.1:53140374-53140393 None:intergenic 50.0%
TCCCTTTGATCCCAACCCAT+CGG + chr7.1:53140376-53140395 MS.gene050240:CDS 50.0%
TCGTGCTCAGTGTCCAAAAG+CGG + chr7.1:53140709-53140728 MS.gene050240:CDS 50.0%
! TAAGGCATCAAGGGGCAACT+AGG - chr7.1:53141841-53141860 None:intergenic 50.0%
! TATGGAGTGCCAACCTGGTT+GGG + chr7.1:53141812-53141831 MS.gene050240:intron 50.0%
! TGGGTTGGGATCAAAGGGAA+TGG - chr7.1:53140375-53140394 None:intergenic 50.0%
!! ACCGATGGGTTGGGATCAAA+GGG - chr7.1:53140380-53140399 None:intergenic 50.0%
!! AGCTAGTGATGGTGATGGAG+AGG - chr7.1:53140589-53140608 None:intergenic 50.0%
!! GAATCCTCTTCAGCCGCTTT+TGG - chr7.1:53140725-53140744 None:intergenic 50.0%
!! GATCAAAGGGAATGGGCTGA+TGG - chr7.1:53140367-53140386 None:intergenic 50.0%
!! GCTAGTGATGGTGATGGAGA+GGG - chr7.1:53140588-53140607 None:intergenic 50.0%
!! TACCGATGGGTTGGGATCAA+AGG - chr7.1:53140381-53140400 None:intergenic 50.0%
!! TAGCCTTGTACCGATGGGTT+GGG - chr7.1:53140389-53140408 None:intergenic 50.0%
!! TCAAAGGGAATGGGCTGATG+GGG - chr7.1:53140365-53140384 None:intergenic 50.0%
ACTAGGCATCCCAACCAGGT+TGG - chr7.1:53141824-53141843 None:intergenic 55.0%
CTTACCCCGGTTCTTCCTCT+TGG - chr7.1:53143355-53143374 None:intergenic 55.0%
GATCCCAACCCATCGGTACA+AGG + chr7.1:53140383-53140402 MS.gene050240:CDS 55.0%
GGCGTTCCAGTGGTTCTTGA+TGG - chr7.1:53143313-53143332 None:intergenic 55.0%
GTGTCCAAAAGCGGCTGAAG+AGG + chr7.1:53140718-53140737 MS.gene050240:CDS 55.0%
! ACCAGGTTGGCACTCCATAG+CGG - chr7.1:53141811-53141830 None:intergenic 55.0%
! ATGGAGTTCTTGGTGCGTCC+GGG - chr7.1:53143294-53143313 None:intergenic 55.0%
! CTATGGAGTGCCAACCTGGT+TGG + chr7.1:53141811-53141830 MS.gene050240:intron 55.0%
! GATGGAGTTCTTGGTGCGTC+CGG - chr7.1:53143295-53143314 None:intergenic 55.0%
!! CAAAGGGAATGGGCTGATGG+GGG - chr7.1:53140364-53140383 None:intergenic 55.0%
!! GTAGCCTTGTACCGATGGGT+TGG - chr7.1:53140390-53140409 None:intergenic 55.0%
AGCGCCGCCAAAATGCCAAG+AGG + chr7.1:53143337-53143356 MS.gene050240:CDS 60.0%
GATGGAGAGGGACTTACCCG+AGG - chr7.1:53140576-53140595 None:intergenic 60.0%
GGCAACTAGGCATCCCAACC+AGG - chr7.1:53141828-53141847 None:intergenic 60.0%
! ACCGCTATGGAGTGCCAACC+TGG + chr7.1:53141807-53141826 MS.gene050240:intron 60.0%
!! GGCATTTTGGCGGCGCTTAG+TGG - chr7.1:53143334-53143353 None:intergenic 60.0%
GGCGCTTAGTGGCGTTCCAG+TGG - chr7.1:53143323-53143342 None:intergenic 65.0%
!! GGGAATGGGCTGATGGGGGA+AGG - chr7.1:53140360-53140379 None:intergenic 65.0%
!! TCTCCTCACGGTGCCACCGT+GGG + chr7.1:53143042-53143061 MS.gene050240:intron 65.0%
!! TTCTCCTCACGGTGCCACCG+TGG + chr7.1:53143041-53143060 MS.gene050240:intron 65.0%
GTTCCCACGGTGGCACCGTG+AGG - chr7.1:53143048-53143067 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 53140216 53143527 53140216 ID=MS.gene050240
chr7.1 mRNA 53140216 53143527 53140216 ID=MS.gene050240.t1;Parent=MS.gene050240
chr7.1 exon 53140216 53140814 53140216 ID=MS.gene050240.t1.exon1;Parent=MS.gene050240.t1
chr7.1 CDS 53140216 53140814 53140216 ID=cds.MS.gene050240.t1;Parent=MS.gene050240.t1
chr7.1 exon 53140963 53141089 53140963 ID=MS.gene050240.t1.exon2;Parent=MS.gene050240.t1
chr7.1 CDS 53140963 53141089 53140963 ID=cds.MS.gene050240.t1;Parent=MS.gene050240.t1
chr7.1 exon 53143201 53143527 53143201 ID=MS.gene050240.t1.exon3;Parent=MS.gene050240.t1
chr7.1 CDS 53143201 53143527 53143201 ID=cds.MS.gene050240.t1;Parent=MS.gene050240.t1
Gene Sequence

>MS.gene050240

ATGGTTCCTTCTCAACTAGGTTCAAATCTTTCACCTCCAACATCACATTACACCACATATTTGTACCAAAATCAATGCAATCAACTTAAGGAACATCCTTTGAATGAGGTTAACCATCACTCTAGTTTTTCTGCAATGGTTCCTTCCCCCATCAGCCCATTCCCTTTGATCCCAACCCATCGGTACAAGGCTACTTACACCAATGGGTATCAGAGAGAATTTATCAGTGCTCGAAATCCAATGATCTTTGCACCAAACCATAATAAGATGGAAGTCATACATGGTCGTCTTAACACTAGCAAAGGAATTTGGGATTTATCTACAAAAAATTTCTTTCAATATGGTGAAACTTCACAACCTCGGGTAAGTCCCTCTCCATCACCATCACTAGCTTATGATGCACATCAATCTGTGTCAATTAATCCTGAGCTTCAAGGAGATCTTTCATGCAATGATGGAATTGGAAACAAATCCAGAGAAAATGATCAAGGATTCGTGCTCAGTGTCCAAAAGCGGCTGAAGAGGATTCAAAAGAATAATGAAATTCAACACAAGGATCTCAATCAAATCAAGGGACAATGGACTTCAAATGAGGATCGGTATATCAAATCATTTAAAATTTTGTATTGTCTTTGTTTATTGTTTTAAGTTTCAATTTGATTAATCTTACCTTGATTATTATTATTTTTTTTGTTATTTGTTCTTGACATATGATAAACAATGAATAATTATTTTATATTTTTGCAGGGTTCTTGTCCAATTGGTGGATCACTTTGGGCTAAGAAAATGGTCCTGTATTGCTAAGTTTATGAAAGGCAGAACTGGAAAACAGTGCAGAGAGAGATGGAATAACCATCTTCGACCAGACATTAAGGTCTCATTCTTTTTAATCATTTCTAGATTTTATCTCTTATACATACACATATAAATAAAATAATATCAACTCTAAGCAATATTGATTCTTGCTTATTTTTTATCTTAACATATTTGATTTTTACATGTATACATATAGCTACATCAAATAAAACGAAAACAAATTATGGATGCATGTAAATAAATGAATCAATGCAAGTAAAATCATTATGTGTTTATGATTTTATAAAGGAAAGCAGAATTTGTAACTATCATAATAGTTTAATATTCATTTCATTGGATTTATAGTGATATTTTTGTAATACATCACCACTACTTTAGTTGTCTATTTTTATAAATAAGCATTGTACTAAATCTTCTTATTGTTCCTATCATCAAGAAGTAATTTGTTTAAACTAATTTTTTTTCAAACATTTTTGAAAATACTGATGATAAATATGTTACTTTTGTAGAGAACAAAAGTGACGATGTCTATAAGAGTGCACCTAAGTTTTATCCATAACTGTTTTTAATTAATAGTTGAGGGGATTATTTACCCTTTTTTCGTAGGTATTTTTTTTTGAAGACAGTCACAGACTTCCACTCTTTATTTCCTTATCTATTACTTTTTTATTGTTTCTGTTTTTGTCCTTTATTCGAGGGGTTTGGTTTGGACCCCTTCTTGTACACTCTTTTCCTTTTTCTAATCAATTTTTGGAGCATGTGATATAGGATGGGGACCGCTATGGAGTGCCAACCTGGTTGGGATGCCTAGTTGCCCCTTGATGCCTTACCTTTCTTTTTAATTCATTAAAAAAAATTAATAAGTTTTTTGTTTAAAATCTAATATTGAGGTAATTTTTGTTTATAGAAATTTATCTTTATCTATTTTTAATTTTGGTAATTTTGAATAGATGAATTTTACACAAATGGTATTTGACTTATTTTCACGCAACTCCTTTCACATATGTTTTTGTTAGAGTCCTACATTGATTATATAAAATTGTTCAATGTATTATTTAAGTCATGAGTTTCTTTCACTTAATGGACTAGACTATCATTTTTTTTTTTTAAACAATGTTATGCCAATTTGTAAGTATTTGATAGAGGTGAAAATTTGAACTCAGGTCCTTTTTATAACTTAACTCTTTCACCTCAGCCACCAAGTCAATCTTTCCCTTTTATGTCTCATTTGTAAGACTAATATTTCTTATTTTATACAAAAAGACGAATAATGTTTTAGATATCTCTCATTTTTTTCAATTTTTTTTTGTCTCATTTGTAAGACTAACATATAGTAGTATGTTTTTTTGTCTCATATGTAACTCTTAGTCATGATTTATGTTAAAAACTTATTTTCTTTTGTTTCGTTGCCGCTTCCTATCAAAATAATTCCTGTGGAATAACCATATGCTCTGTTTCTAATTACATTGCTTTGTACAATGTTATTCTTAATTGTCAAACAATGTAAATGATCGATGTTGAACACTAGATATACATGAGTTGACTGATCAATTTATTTTTCGAGTGATACTTGTCAAAATTATTCCGTTTATTAAGTATTTATGAATATTATCTTTTGTCAATCCAACACGTGAAGTTGAATATCTATATAAGCCATGTAAGCTTATGGTCGATCATTACTCGTATTTCAAATATTTTATCATACATTGGACTGAAGTAAATTGATGATTTTTTTTTTTTTTTAAACTATACTAAATTTGCAGGTTTGATGTAGTCAATTAATTTGCCATTTGAAATGACAAATATAGAATTTACATAGATTTATTAAGCGGTGTAACTTTAACAAGAGATTTTTTAAGGGAATTTTAATAAGAGTGTTATTCATACAATTGGTCTATATGTGTTAAATTGGTGTTTGATTTTCTATAAAATTTTGCCTCTTGTTTATGATTCTCTATCATAATGCCATATATACCACAATTTCATAAAGCAAGAAATCCAAGATTTTGTTCTCCTCACGGTGCCACCGTGGGAACAAATACATGCTATATTTTGTTAGATAGCTAATTAGAATCAGTCATTACTAAATTGGTGAAATGTGAATCTTCCTTACATTAAATATAATTAACAATATATCTAATCCACACACATTGTTATGTATGATTTCAGAAGGATTCATGGTCTGAAGAGGAGGACAAAATACTAATCGAAGCTCACAAAATAGTTGGAAACAAGTGGACTGAAATTTCAAGAAGATTGCCCGGACGCACCAAGAACTCCATCAAGAACCACTGGAACGCCACTAAGCGCCGCCAAAATGCCAAGAGGAAGAACCGGGGTAAGAGTTCAATGCTAAGGAAGTTGAAAAGGAGCCGATGTAGTATTCTACGAGCATGGATATTAGAAATCAACCAAATTTTGAAAGCTCAGAGAGTGATTTTAGAACTGAAGGTTTGGCTACGCCAGAGAACGAAATTTGTGGGTATGTTCCAATGA
Protein sequence

>MS.gene050240.t1

MVPSQLGSNLSPPTSHYTTYLYQNQCNQLKEHPLNEVNHHSSFSAMVPSPISPFPLIPTHRYKATYTNGYQREFISARNPMIFAPNHNKMEVIHGRLNTSKGIWDLSTKNFFQYGETSQPRVSPSPSPSLAYDAHQSVSINPELQGDLSCNDGIGNKSRENDQGFVLSVQKRLKRIQKNNEIQHKDLNQIKGQWTSNEDRVLVQLVDHFGLRKWSCIAKFMKGRTGKQCRERWNNHLRPDIKKDSWSEEEDKILIEAHKIVGNKWTEISRRLPGRTKNSIKNHWNATKRRQNAKRKNRGKSSMLRKLKRSRCSILRAWILEINQILKAQRVILELKVWLRQRTKFVGMFQ