AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene050248

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene050248.t1 MTR_7g451170 89.563 412 43 0 2 413 1 412 0.0 766
MS.gene050248.t1 MTR_4g088015 71.359 412 118 0 2 413 31 442 0.0 555
MS.gene050248.t1 MTR_7g037130 68.392 367 107 2 47 413 1 358 0.0 513
MS.gene050248.t1 MTR_7g037260 68.120 367 108 2 47 413 1 358 0.0 510
MS.gene050248.t1 MTR_7g035350 49.777 448 166 6 2 396 1 442 9.04e-135 394
MS.gene050248.t1 MTR_1g057980 51.553 322 113 6 91 397 1 294 2.19e-98 296
MS.gene050248.t1 MTR_7g450950 44.944 356 161 9 35 387 14 337 7.38e-85 263
MS.gene050248.t1 MTR_3g077650 44.488 254 111 4 186 410 175 427 2.45e-55 189
MS.gene050248.t1 MTR_4g105660 43.874 253 99 7 191 409 179 422 2.76e-55 189
MS.gene050248.t1 MTR_3g463400 65.041 123 37 1 191 307 132 254 2.14e-51 179
MS.gene050248.t1 MTR_5g070020 60.465 129 44 1 191 312 121 249 1.03e-50 174
MS.gene050248.t1 MTR_5g049190 43.096 239 104 6 189 410 16 239 3.29e-49 167
MS.gene050248.t1 MTR_7g035300 38.372 258 95 7 155 412 39 232 1.06e-45 157
MS.gene050248.t1 MTR_7g061330 60.185 108 42 1 187 293 108 215 2.27e-38 145
MS.gene050248.t1 MTR_7g461410 60.185 108 42 1 187 293 108 215 2.27e-38 145
MS.gene050248.t1 MTR_7g061330 60.185 108 42 1 187 293 72 179 4.23e-38 144
MS.gene050248.t1 MTR_1g026870 55.963 109 47 1 187 294 80 188 5.35e-38 146
MS.gene050248.t1 MTR_3g110028 56.881 109 46 1 187 294 80 188 8.79e-38 146
MS.gene050248.t1 MTR_4g019370 53.922 102 47 0 190 291 36 137 6.47e-34 129
MS.gene050248.t1 MTR_5g010650 57.292 96 41 0 191 286 109 204 4.57e-33 129
MS.gene050248.t1 MTR_3g101290 48.544 103 53 0 189 291 34 136 1.53e-31 120
MS.gene050248.t1 MTR_4g094982 48.544 103 53 0 189 291 2 104 3.20e-29 115
MS.gene050248.t1 MTR_5g016510 49.515 103 52 0 189 291 2 104 4.73e-29 115
MS.gene050248.t1 MTR_5g082910 51.000 100 49 0 189 288 16 115 9.80e-29 114
MS.gene050248.t1 MTR_6g074860 47.619 105 55 0 192 296 4 108 1.32e-28 112
MS.gene050248.t1 MTR_5g041570 47.788 113 54 1 192 299 134 246 1.44e-27 114
MS.gene050248.t1 MTR_0008s0390 44.355 124 65 3 192 311 15 138 1.91e-27 110
MS.gene050248.t1 MTR_0008s0470 46.535 101 53 1 192 291 15 115 7.15e-27 109
MS.gene050248.t1 MTR_0197s0010 31.982 222 127 8 195 394 6 225 7.33e-27 107
MS.gene050248.t1 MTR_4g082040 48.000 100 52 0 192 291 105 204 9.22e-27 111
MS.gene050248.t1 MTR_2g089450 45.946 111 59 1 192 301 14 124 1.91e-26 107
MS.gene050248.t1 MTR_0251s0050 47.573 103 52 2 192 292 15 117 2.27e-26 107
MS.gene050248.t1 MTR_6g027370 46.535 101 54 0 191 291 98 198 4.91e-26 108
MS.gene050248.t1 MTR_3g089045 52.000 100 48 0 192 291 16 115 1.01e-25 106
MS.gene050248.t1 MTR_4g478180 48.544 103 51 2 192 292 15 117 1.52e-25 106
MS.gene050248.t1 MTR_3g052450 39.695 131 78 1 162 291 12 142 1.74e-25 108
MS.gene050248.t1 MTR_2g064160 43.564 101 56 1 192 291 13 113 2.38e-25 105
MS.gene050248.t1 MTR_1g021230 44.828 116 56 2 192 306 59 167 2.41e-25 107
MS.gene050248.t1 MTR_3g052430 47.115 104 54 1 189 291 40 143 3.80e-25 107
MS.gene050248.t1 MTR_5g029840 45.545 101 54 1 192 291 14 114 3.89e-25 105
MS.gene050248.t1 MTR_3g011610 38.750 160 72 4 141 294 4 143 4.48e-25 107
MS.gene050248.t1 MTR_6g027340 45.000 100 55 0 192 291 16 115 5.12e-25 102
MS.gene050248.t1 MTR_6g015455 47.000 100 53 0 189 288 2 101 6.34e-25 108
MS.gene050248.t1 MTR_4g100720 48.454 97 49 1 192 287 15 111 7.99e-25 100
MS.gene050248.t1 MTR_7g086960 41.259 143 73 2 158 291 48 188 9.63e-25 104
MS.gene050248.t1 MTR_2g011660 46.535 101 53 1 192 291 15 115 1.01e-24 104
MS.gene050248.t1 MTR_8g042410 50.476 105 50 2 192 294 39 143 1.06e-24 106
MS.gene050248.t1 MTR_3g074520 45.545 101 54 1 192 291 14 114 2.00e-24 103
MS.gene050248.t1 MTR_2g089420 41.964 112 62 2 192 300 13 124 2.25e-24 104
MS.gene050248.t1 MTR_4g091490 45.545 101 54 1 192 291 15 115 3.14e-24 103
MS.gene050248.t1 MTR_8g031360 50.000 106 46 3 192 292 15 118 3.22e-24 102
MS.gene050248.t1 MTR_2g089620 45.545 101 54 1 192 291 14 114 4.44e-24 102
MS.gene050248.t1 MTR_8g095390 43.103 116 60 3 182 295 8 119 5.58e-24 101
MS.gene050248.t1 MTR_8g017440 42.157 102 56 2 192 291 14 114 6.50e-24 102
MS.gene050248.t1 MTR_6g027360 45.000 100 55 0 192 291 78 177 7.38e-24 101
MS.gene050248.t1 MTR_4g063100 45.794 107 57 1 192 297 9 115 1.04e-23 99.8
MS.gene050248.t1 MTR_5g007370 44.660 103 55 2 192 292 14 116 1.18e-23 100
MS.gene050248.t1 MTR_4g029540 38.065 155 81 5 192 333 12 164 1.21e-23 100
MS.gene050248.t1 MTR_4g073420 46.364 110 55 2 192 300 14 120 1.53e-23 99.8
MS.gene050248.t1 MTR_8g017540 42.157 102 56 2 192 291 60 160 1.70e-23 101
MS.gene050248.t1 MTR_7g096930 42.735 117 61 3 192 304 14 128 1.76e-23 99.8
MS.gene050248.t1 MTR_1g085640 43.396 106 58 2 192 295 14 119 2.72e-23 100
MS.gene050248.t1 MTR_8g006470 48.544 103 51 2 192 292 12 114 2.83e-23 99.4
MS.gene050248.t1 MTR_1g085040 45.192 104 53 3 192 292 14 116 2.98e-23 100
MS.gene050248.t1 MTR_3g077110 43.137 102 55 2 192 291 14 114 3.17e-23 100
MS.gene050248.t1 MTR_3g028740 45.763 118 56 3 183 292 9 126 4.07e-23 99.8
MS.gene050248.t1 MTR_4g082290 44.660 103 55 2 192 292 14 116 4.22e-23 100
MS.gene050248.t1 MTR_2g096380 47.273 110 56 2 192 300 8 116 4.35e-23 97.4
MS.gene050248.t1 MTR_7g110830 43.396 106 58 2 192 295 14 119 5.14e-23 99.8
MS.gene050248.t1 MTR_1g112760 43.137 102 55 2 192 291 15 115 5.27e-23 97.1
MS.gene050248.t1 MTR_7g076740 46.296 108 51 3 192 294 14 119 5.56e-23 98.6
MS.gene050248.t1 MTR_2g099740 42.157 102 56 2 192 291 14 114 5.61e-23 100
MS.gene050248.t1 MTR_3g461490 42.593 108 60 2 189 294 11 118 5.69e-23 99.0
MS.gene050248.t1 MTR_7g115650 42.424 99 52 2 192 287 14 110 7.39e-23 95.9
MS.gene050248.t1 MTR_4g102380 47.115 104 51 3 192 292 14 116 7.50e-23 97.8
MS.gene050248.t1 MTR_7g111290 46.392 97 49 2 192 286 14 109 8.00e-23 99.8
MS.gene050248.t1 MTR_8g017500 41.176 102 57 2 192 291 14 114 8.11e-23 99.0
MS.gene050248.t1 MTR_1g100653 46.392 97 51 1 192 287 14 110 1.02e-22 97.8
MS.gene050248.t1 MTR_4g105130 41.584 101 58 1 192 291 14 114 1.29e-22 98.6
MS.gene050248.t1 MTR_4g065017 44.660 103 55 2 192 292 19 121 1.35e-22 98.2
MS.gene050248.t1 MTR_2g097910 44.660 103 55 2 192 292 22 124 1.78e-22 97.4
MS.gene050248.t1 MTR_1g073170 45.455 110 52 3 192 299 22 125 1.85e-22 96.3
MS.gene050248.t1 MTR_4g125520 45.361 97 52 1 192 287 14 110 1.85e-22 97.4
MS.gene050248.t1 MTR_6g009430 42.574 101 57 1 192 291 14 114 1.97e-22 97.8
MS.gene050248.t1 MTR_4g082230 44.660 103 55 2 192 292 14 116 2.02e-22 98.6
MS.gene050248.t1 MTR_5g010020 45.361 97 52 1 192 287 14 110 2.11e-22 97.8
MS.gene050248.t1 MTR_5g088640 43.689 103 56 2 192 292 14 116 2.13e-22 96.3
MS.gene050248.t1 MTR_5g078140 47.115 104 51 3 192 292 14 116 2.16e-22 97.4
MS.gene050248.t1 MTR_5g088080 43.689 103 56 2 192 292 14 116 2.20e-22 96.3
MS.gene050248.t1 MTR_5g088150 43.689 103 56 2 192 292 14 116 2.20e-22 96.3
MS.gene050248.t1 MTR_5g488210 43.689 103 56 2 192 292 14 116 2.20e-22 96.3
MS.gene050248.t1 MTR_8g098860 44.444 108 56 2 184 287 3 110 2.38e-22 97.1
MS.gene050248.t1 MTR_5g042030 44.660 103 55 2 192 292 9 111 2.51e-22 96.7
MS.gene050248.t1 MTR_8g027345 46.465 99 48 2 192 287 14 110 2.63e-22 96.7
MS.gene050248.t1 MTR_5g062790 44.660 103 55 2 192 292 11 113 2.77e-22 96.7
MS.gene050248.t1 MTR_4g485530 43.689 103 53 2 192 291 14 114 2.89e-22 94.0
MS.gene050248.t1 MTR_3g097450 44.340 106 57 2 192 295 14 119 3.01e-22 96.7
MS.gene050248.t1 MTR_1g062940 36.842 171 93 5 192 351 8 174 3.16e-22 94.7
MS.gene050248.t1 MTR_5g488170 43.689 103 56 2 192 292 14 116 3.39e-22 95.1
MS.gene050248.t1 MTR_5g079670 43.564 101 56 1 192 291 13 113 3.71e-22 94.4
MS.gene050248.t1 MTR_7g017260 34.270 178 91 6 192 361 27 186 3.88e-22 95.9
MS.gene050248.t1 MTR_7g011170 44.660 103 55 2 192 292 14 116 4.70e-22 96.3
MS.gene050248.t1 MTR_8g020490 43.810 105 55 3 186 287 3 106 4.79e-22 95.1
MS.gene050248.t1 MTR_7g035075 45.098 102 53 2 186 285 10 110 5.97e-22 93.6
MS.gene050248.t1 MTR_7g117730 44.037 109 57 2 192 299 14 119 6.89e-22 94.7
MS.gene050248.t1 MTR_3g065440 46.154 104 52 3 192 292 14 116 7.16e-22 95.5
MS.gene050248.t1 MTR_5g088610 44.118 102 55 2 192 291 11 112 7.29e-22 96.3
MS.gene050248.t1 MTR_8g017350 42.718 103 55 3 192 291 14 115 8.48e-22 98.2
MS.gene050248.t1 MTR_1g076150 43.810 105 55 3 192 293 14 117 8.81e-22 94.4
MS.gene050248.t1 MTR_8g017390 40.777 103 57 3 192 291 14 115 8.86e-22 97.4
MS.gene050248.t1 MTR_0001s0360 43.299 97 54 1 192 287 9 105 8.93e-22 94.4
MS.gene050248.t1 MTR_8g017340 42.718 103 55 3 192 291 14 115 9.49e-22 97.4
MS.gene050248.t1 MTR_1g045610 47.917 96 47 2 192 285 23 117 1.35e-21 94.0
MS.gene050248.t1 MTR_5g079120 38.971 136 71 3 161 291 35 163 2.05e-21 94.4
MS.gene050248.t1 MTR_0008s0280 36.719 128 78 2 192 318 14 139 2.28e-21 92.4
MS.gene050248.t1 MTR_2g067420 45.631 103 54 2 187 287 10 112 2.40e-21 94.4
MS.gene050248.t1 MTR_1g043080 43.689 103 56 2 192 292 14 116 2.64e-21 92.8
MS.gene050248.t1 MTR_5g079290 41.584 101 58 1 192 291 19 119 3.20e-21 92.8
MS.gene050248.t1 MTR_1g043050 42.991 107 58 2 192 295 14 120 3.54e-21 92.4
MS.gene050248.t1 MTR_6g012690 43.689 103 56 2 192 292 14 116 4.72e-21 94.0
MS.gene050248.t1 MTR_1g083630 44.554 101 55 1 192 291 14 114 4.95e-21 95.9
MS.gene050248.t1 MTR_5g078910 41.584 101 58 1 192 291 9 109 5.10e-21 93.2
MS.gene050248.t1 MTR_4g121460 41.748 103 55 2 192 291 14 114 5.48e-21 93.6
MS.gene050248.t1 MTR_7g010210 40.517 116 67 2 192 306 14 128 7.31e-21 93.2
MS.gene050248.t1 MTR_2g088170 39.073 151 70 4 192 339 31 162 8.20e-21 94.4
MS.gene050248.t1 MTR_7g010210 40.517 116 67 2 192 306 14 128 1.06e-20 91.7
MS.gene050248.t1 MTR_6g006030 42.574 101 57 1 186 285 10 110 1.10e-20 90.1
MS.gene050248.t1 MTR_0063s0090 43.878 98 52 2 192 287 14 110 1.60e-20 90.1
MS.gene050248.t1 MTR_0140s0030 39.316 117 66 3 192 306 15 128 1.78e-20 92.0
MS.gene050248.t1 MTR_0489s0020 39.316 117 66 3 192 306 15 128 1.78e-20 92.0
MS.gene050248.t1 MTR_2g034790 40.777 103 56 2 192 291 14 114 2.38e-20 91.7
MS.gene050248.t1 MTR_1g100667 37.719 114 70 1 183 295 6 119 3.43e-20 90.1
MS.gene050248.t1 MTR_5g078860 35.065 154 93 3 192 343 9 157 4.47e-20 90.5
MS.gene050248.t1 MTR_5g078950 40.000 100 59 1 192 290 9 108 4.53e-20 89.7
MS.gene050248.t1 MTR_6g055910 38.889 108 65 1 192 298 16 123 4.70e-20 90.1
MS.gene050248.t1 MTR_1g110460 42.718 103 55 3 186 285 21 122 5.34e-20 90.5
MS.gene050248.t1 MTR_3g083540 40.000 110 62 2 192 300 43 149 5.67e-20 90.1
MS.gene050248.t1 MTR_5g078930 34.868 152 91 3 192 341 11 156 7.41e-20 87.8
MS.gene050248.t1 MTR_8g468380 39.394 132 71 3 170 301 2 124 7.77e-20 91.3
MS.gene050248.t1 MTR_5g079220 38.679 106 64 1 192 296 23 128 1.07e-19 89.0
MS.gene050248.t1 MTR_6g012180 42.424 99 52 2 192 287 14 110 1.38e-19 89.4
MS.gene050248.t1 MTR_8g060940 42.105 95 54 1 192 285 9 103 2.44e-19 87.0
MS.gene050248.t1 MTR_5g078800 33.766 154 95 3 192 343 9 157 3.05e-19 87.4
MS.gene050248.t1 MTR_7g087130 42.308 104 58 2 192 293 14 117 3.48e-19 88.6
MS.gene050248.t1 MTR_1g008970 56.757 74 31 1 215 287 113 186 4.58e-19 86.7
MS.gene050248.t1 MTR_1g086530 43.750 96 51 2 192 285 35 129 5.60e-19 86.7
MS.gene050248.t1 MTR_3g039990 40.594 101 59 1 192 291 15 115 6.93e-19 87.0
MS.gene050248.t1 MTR_5g038910 37.500 120 74 1 172 291 7 125 1.34e-18 87.8
MS.gene050248.t1 MTR_4g128190 41.905 105 48 3 192 295 13 105 2.92e-18 84.0
MS.gene050248.t1 MTR_5g038910 37.500 120 74 1 172 291 7 125 3.49e-18 86.3
MS.gene050248.t1 MTR_7g111290 53.226 62 29 0 225 286 6 67 4.77e-18 85.1
MS.gene050248.t1 MTR_0247s0040 39.000 100 60 1 192 290 9 108 6.10e-18 81.6
MS.gene050248.t1 MTR_6g090405 38.235 102 61 2 192 291 14 115 6.95e-18 83.2
MS.gene050248.t1 MTR_6g055910 41.667 84 47 1 217 298 11 94 7.04e-18 83.2
MS.gene050248.t1 MTR_5g014990 40.909 110 61 3 192 297 14 123 8.39e-18 84.0
MS.gene050248.t1 MTR_4g097570 41.837 98 54 2 192 286 14 111 1.05e-17 83.6
MS.gene050248.t1 MTR_1g017140 37.607 117 69 3 192 304 14 130 1.28e-17 84.0
MS.gene050248.t1 MTR_1g017000 37.302 126 66 4 192 314 14 129 1.80e-17 82.0
MS.gene050248.t1 MTR_3g103570 40.367 109 62 3 192 297 14 122 2.00e-17 83.2
MS.gene050248.t1 MTR_0193s0090 34.058 138 78 3 192 325 9 137 3.74e-17 80.1
MS.gene050248.t1 MTR_1g086510 36.036 111 70 1 176 285 7 117 7.02e-17 80.5
MS.gene050248.t1 MTR_4g097570 41.237 97 55 2 192 286 14 110 7.10e-17 80.9
MS.gene050248.t1 MTR_2g095520 39.796 98 57 2 192 287 14 111 1.31e-16 80.5
MS.gene050248.t1 MTR_4g063100 43.902 82 44 1 218 297 5 86 1.56e-16 78.6
MS.gene050248.t1 MTR_4g057635 38.679 106 62 3 192 294 14 119 1.62e-16 80.5
MS.gene050248.t1 MTR_4g128670 41.837 98 55 2 192 287 14 111 1.85e-16 80.5
MS.gene050248.t1 MTR_2g033170 42.708 96 52 2 192 285 26 120 2.99e-16 79.7
MS.gene050248.t1 MTR_2g096380 45.882 85 43 2 218 300 14 97 8.62e-16 76.3
MS.gene050248.t1 MTR_7g061550 31.429 140 86 3 194 325 9 146 1.54e-15 77.8
MS.gene050248.t1 MTR_7g109320 44.444 99 50 2 192 287 14 110 1.91e-15 77.4
MS.gene050248.t1 MTR_7g102110 36.190 105 65 2 189 291 11 115 2.06e-15 76.3
MS.gene050248.t1 MTR_6g080360 38.211 123 75 1 163 285 501 622 2.08e-15 79.0
MS.gene050248.t1 MTR_6g080360 34.337 166 96 4 122 285 248 402 2.73e-15 78.6
MS.gene050248.t1 MTR_4g123040 33.813 139 86 3 179 312 10 147 8.65e-15 75.1
MS.gene050248.t1 MTR_3g045430 32.653 98 65 1 195 291 18 115 6.07e-13 69.3
MS.gene050248.t1 MTR_7g115550 37.647 85 52 1 193 277 8 91 1.98e-12 69.3
MS.gene050248.t1 MTR_7g115550 37.647 85 52 1 193 277 8 91 2.13e-12 69.7
MS.gene050248.t1 MTR_1g085880 38.384 99 59 2 195 291 17 115 6.57e-12 64.7
MS.gene050248.t1 MTR_5g010470 38.372 86 50 1 192 277 7 89 9.50e-12 67.4
MS.gene050248.t1 MTR_1g085770 38.384 99 59 2 195 291 17 115 9.73e-12 65.9
MS.gene050248.t1 MTR_5g007300 40.000 75 44 1 192 265 66 140 2.18e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene050248.t1 AT4G18770 68.852 122 38 0 191 312 216 337 5.52e-55 188
MS.gene050248.t1 AT3G27785 55.215 163 69 3 149 308 143 304 6.78e-52 180
MS.gene050248.t1 AT5G58850 47.090 189 93 1 114 302 34 215 2.00e-48 171
MS.gene050248.t1 AT5G11050 65.000 120 40 1 182 299 93 212 7.57e-48 169
MS.gene050248.t1 AT5G40360 62.185 119 44 1 185 302 150 268 4.16e-47 165
MS.gene050248.t1 AT5G11510 55.046 109 48 1 187 294 76 184 5.90e-38 146
MS.gene050248.t1 AT5G11510 55.046 109 48 1 187 294 76 184 5.90e-38 146
MS.gene050248.t1 AT5G11510 55.046 109 48 1 187 294 76 184 5.90e-38 146
MS.gene050248.t1 AT5G11510 55.046 109 48 1 187 294 76 184 6.77e-38 146
MS.gene050248.t1 AT5G11510 55.046 109 48 1 187 294 76 184 6.84e-38 146
MS.gene050248.t1 AT3G09370 58.095 105 44 0 187 291 130 234 3.38e-37 142
MS.gene050248.t1 AT3G09370 58.095 105 44 0 187 291 125 229 3.43e-37 142
MS.gene050248.t1 AT5G02320 57.944 107 44 1 187 292 122 228 3.66e-37 142
MS.gene050248.t1 AT5G02320 57.944 107 44 1 187 292 122 228 3.66e-37 142
MS.gene050248.t1 AT3G09370 58.095 105 44 0 187 291 138 242 4.07e-37 142
MS.gene050248.t1 AT5G02320 57.143 105 45 0 187 291 62 166 4.96e-37 141
MS.gene050248.t1 AT2G25230 56.190 105 46 0 192 296 26 130 3.31e-36 133
MS.gene050248.t1 AT4G32730 54.128 109 49 1 187 294 82 190 4.12e-36 141
MS.gene050248.t1 AT4G32730 54.128 109 49 1 187 294 82 190 4.12e-36 141
MS.gene050248.t1 AT4G32730 54.128 109 49 1 187 294 82 190 4.12e-36 141
MS.gene050248.t1 AT4G32730 54.128 109 49 1 187 294 82 190 4.12e-36 141
MS.gene050248.t1 AT4G32730 54.128 109 49 1 187 294 82 190 5.61e-36 140
MS.gene050248.t1 AT5G40430 40.761 184 100 4 148 325 8 188 1.41e-35 132
MS.gene050248.t1 AT3G09230 52.427 103 49 0 189 291 52 154 6.86e-31 122
MS.gene050248.t1 AT4G00540 49.624 133 54 4 169 292 79 207 1.31e-30 122
MS.gene050248.t1 AT3G55730 47.788 113 59 0 189 301 53 165 3.13e-30 120
MS.gene050248.t1 AT4G33450 46.825 126 63 1 178 303 5 126 3.47e-30 117
MS.gene050248.t1 AT4G00540 49.624 133 54 4 169 292 77 205 3.92e-30 121
MS.gene050248.t1 AT1G17950 43.382 136 72 2 192 324 5 138 3.37e-29 114
MS.gene050248.t1 AT1G69560 44.538 119 66 0 192 310 107 225 2.10e-28 114
MS.gene050248.t1 AT1G69560 44.538 119 66 0 192 310 123 241 2.13e-28 114
MS.gene050248.t1 AT4G37260 49.057 106 54 0 186 291 7 112 1.42e-27 112
MS.gene050248.t1 AT1G26780 50.000 100 50 0 192 291 98 197 2.43e-27 110
MS.gene050248.t1 AT5G17800 52.000 100 48 0 192 291 93 192 2.76e-27 111
MS.gene050248.t1 AT1G26780 50.000 100 50 0 192 291 98 197 3.03e-27 111
MS.gene050248.t1 AT2G26960 50.000 102 50 1 192 292 22 123 4.65e-27 112
MS.gene050248.t1 AT2G23290 49.057 106 54 0 186 291 7 112 5.01e-27 110
MS.gene050248.t1 AT2G26950 45.872 109 50 2 192 295 18 122 6.35e-27 111
MS.gene050248.t1 AT3G11440 48.571 105 52 2 192 294 43 147 9.35e-27 112
MS.gene050248.t1 AT5G67300 43.750 112 63 0 189 300 3 114 1.36e-26 108
MS.gene050248.t1 AT3G11440 48.571 105 52 2 192 294 43 147 2.49e-26 111
MS.gene050248.t1 AT3G11440 48.571 105 52 2 192 294 43 147 2.49e-26 111
MS.gene050248.t1 AT3G11440 48.571 105 52 2 192 294 43 147 2.49e-26 111
MS.gene050248.t1 AT5G14750 41.481 135 74 3 192 324 18 149 4.15e-26 104
MS.gene050248.t1 AT2G39880 43.519 108 61 0 189 296 47 154 5.74e-26 108
MS.gene050248.t1 AT3G50060 43.689 103 58 0 189 291 3 105 6.23e-26 107
MS.gene050248.t1 AT3G28470 47.000 100 52 1 189 287 11 110 8.52e-26 107
MS.gene050248.t1 AT1G57560 34.500 200 108 7 192 379 14 202 9.29e-26 106
MS.gene050248.t1 AT4G26930 47.059 102 53 1 192 292 21 122 1.24e-25 107
MS.gene050248.t1 AT1G74430 44.340 106 58 1 192 296 14 119 1.55e-25 105
MS.gene050248.t1 AT5G55020 48.039 102 52 1 192 292 28 129 1.75e-25 108
MS.gene050248.t1 AT3G29020 42.609 115 61 1 192 306 65 174 2.46e-25 103
MS.gene050248.t1 AT3G29020 42.609 115 61 1 192 306 67 176 3.16e-25 105
MS.gene050248.t1 AT5G06100 46.667 105 54 2 192 294 34 138 3.91e-25 107
MS.gene050248.t1 AT2G32460 48.544 103 48 2 192 291 20 120 4.43e-25 107
MS.gene050248.t1 AT2G32460 48.544 103 48 2 192 291 8 108 4.53e-25 107
MS.gene050248.t1 AT5G40330 47.959 98 48 2 192 287 14 110 5.80e-25 102
MS.gene050248.t1 AT4G28110 46.535 101 53 1 192 291 14 114 8.35e-25 103
MS.gene050248.t1 AT5G06100 46.667 105 54 2 192 294 34 138 8.89e-25 106
MS.gene050248.t1 AT5G06100 46.667 105 54 2 192 294 34 138 8.89e-25 106
MS.gene050248.t1 AT5G06100 46.667 105 54 2 192 294 34 138 8.89e-25 106
MS.gene050248.t1 AT5G06100 46.667 105 54 2 192 294 34 138 8.89e-25 106
MS.gene050248.t1 AT3G27920 47.959 98 48 2 192 287 16 112 1.23e-24 101
MS.gene050248.t1 AT1G73410 50.000 100 50 0 192 291 6 105 1.54e-24 100
MS.gene050248.t1 AT1G73410 50.000 100 50 0 192 291 6 105 1.79e-24 101
MS.gene050248.t1 AT4G21440 47.525 101 52 1 192 291 14 114 2.21e-24 103
MS.gene050248.t1 AT4G38620 37.908 153 91 2 192 343 14 163 2.73e-24 102
MS.gene050248.t1 AT3G61250 50.000 104 48 3 192 292 14 116 2.81e-24 102
MS.gene050248.t1 AT4G05100 46.535 101 53 1 192 291 15 115 3.32e-24 102
MS.gene050248.t1 AT3G12720 44.118 102 54 2 192 291 24 124 4.78e-24 101
MS.gene050248.t1 AT5G16770 46.535 101 53 1 192 291 14 114 5.80e-24 102
MS.gene050248.t1 AT5G16770 46.535 101 53 1 192 291 14 114 5.80e-24 102
MS.gene050248.t1 AT5G59780 46.789 109 56 2 192 299 10 117 7.18e-24 99.8
MS.gene050248.t1 AT5G16770 46.535 101 53 1 192 291 14 114 7.26e-24 102
MS.gene050248.t1 AT5G16770 46.535 101 53 1 192 291 14 114 7.26e-24 102
MS.gene050248.t1 AT3G46130 47.706 109 55 2 192 299 11 118 1.19e-23 99.8
MS.gene050248.t1 AT1G22640 48.077 104 50 3 192 292 14 116 1.22e-23 99.8
MS.gene050248.t1 AT1G09540 35.294 187 110 6 192 375 14 192 1.24e-23 101
MS.gene050248.t1 AT5G26660 36.478 159 93 5 192 345 14 169 1.33e-23 101
MS.gene050248.t1 AT3G13890 40.594 101 59 1 192 291 14 114 2.19e-23 100
MS.gene050248.t1 AT5G10280 44.660 103 55 2 192 292 14 116 2.47e-23 100
MS.gene050248.t1 AT3G13890 38.182 110 58 1 192 291 14 123 2.48e-23 100
MS.gene050248.t1 AT5G12870 47.573 103 52 2 192 292 20 122 2.62e-23 99.4
MS.gene050248.t1 AT1G18570 47.573 103 52 2 192 292 15 117 3.02e-23 100
MS.gene050248.t1 AT5G35550 46.078 102 52 2 192 291 16 116 3.56e-23 98.2
MS.gene050248.t1 AT4G09460 32.039 206 110 6 192 396 14 190 4.01e-23 97.4
MS.gene050248.t1 AT1G57560 43.925 107 56 3 192 295 14 119 4.37e-23 98.6
MS.gene050248.t1 AT4G01680 39.286 140 79 3 192 328 14 150 4.38e-23 99.8
MS.gene050248.t1 AT3G02940 45.545 101 54 1 192 291 14 114 4.69e-23 99.0
MS.gene050248.t1 AT4G01680 39.286 140 79 3 192 328 14 150 6.24e-23 97.1
MS.gene050248.t1 AT2G47190 36.774 155 88 4 175 321 5 157 6.44e-23 97.8
MS.gene050248.t1 AT5G54230 47.115 104 51 3 192 292 14 116 6.76e-23 99.0
MS.gene050248.t1 AT3G02940 45.545 101 54 1 192 291 14 114 7.53e-23 98.6
MS.gene050248.t1 AT3G02940 45.545 101 54 1 192 291 14 114 7.53e-23 98.6
MS.gene050248.t1 AT3G30210 36.810 163 87 3 192 344 29 185 8.62e-23 97.8
MS.gene050248.t1 AT4G12350 45.192 104 53 3 192 292 14 116 9.43e-23 97.8
MS.gene050248.t1 AT5G65230 42.574 101 57 1 192 291 14 114 1.11e-22 98.2
MS.gene050248.t1 AT5G52600 42.735 117 63 3 192 305 14 129 1.19e-22 95.5
MS.gene050248.t1 AT3G08500 45.794 107 56 2 188 292 28 134 1.74e-22 98.2
MS.gene050248.t1 AT3G60460 46.602 103 53 2 192 292 13 115 1.77e-22 97.4
MS.gene050248.t1 AT4G01680 36.842 152 78 3 192 328 14 162 1.79e-22 98.2
MS.gene050248.t1 AT3G23250 42.241 116 61 3 192 303 14 127 2.29e-22 96.7
MS.gene050248.t1 AT1G74080 43.396 106 59 1 192 296 14 119 2.47e-22 97.4
MS.gene050248.t1 AT2G16720 46.296 108 52 3 192 295 14 119 2.50e-22 96.3
MS.gene050248.t1 AT1G34670 42.574 101 57 1 192 291 14 114 3.42e-22 97.4
MS.gene050248.t1 AT3G13540 41.748 103 55 2 192 291 25 125 3.48e-22 95.1
MS.gene050248.t1 AT1G66230 46.154 104 52 3 192 292 14 116 3.66e-22 95.9
MS.gene050248.t1 AT1G35515 42.727 110 59 2 192 300 14 120 4.73e-22 94.0
MS.gene050248.t1 AT4G22680 46.154 104 52 3 192 292 14 116 5.93e-22 95.1
MS.gene050248.t1 AT1G06180 44.762 105 54 3 192 293 14 117 6.90e-22 94.4
MS.gene050248.t1 AT2G31180 38.793 116 70 1 192 306 14 129 7.24e-22 94.4
MS.gene050248.t1 AT3G24310 41.176 119 67 2 192 308 20 137 1.20e-21 94.4
MS.gene050248.t1 AT5G56110 42.593 108 60 2 189 294 11 118 1.45e-21 95.1
MS.gene050248.t1 AT1G56160 43.636 110 57 4 187 292 10 118 1.67e-21 94.4
MS.gene050248.t1 AT3G48920 42.609 115 64 2 178 291 7 120 2.10e-21 93.6
MS.gene050248.t1 AT4G13480 47.917 96 47 2 192 285 8 102 3.05e-21 92.8
MS.gene050248.t1 AT5G07690 44.118 102 56 1 192 292 14 115 3.51e-21 94.4
MS.gene050248.t1 AT1G63910 44.330 97 53 1 192 287 14 110 3.64e-21 94.7
MS.gene050248.t1 AT4G17785 40.594 101 59 1 192 291 15 115 3.94e-21 94.4
MS.gene050248.t1 AT5G62470 42.157 102 58 1 192 292 14 115 4.11e-21 94.4
MS.gene050248.t1 AT1G66370 40.517 116 65 2 192 306 10 122 4.24e-21 92.0
MS.gene050248.t1 AT3G53200 41.525 118 65 3 186 301 5 120 4.28e-21 92.0
MS.gene050248.t1 AT4G17785 40.594 101 59 1 192 291 15 115 4.31e-21 94.4
MS.gene050248.t1 AT4G34990 44.660 103 55 2 192 292 14 116 4.46e-21 92.8
MS.gene050248.t1 AT3G01140 43.689 103 56 2 192 292 14 116 5.20e-21 94.0
MS.gene050248.t1 AT1G18710 39.623 106 62 2 192 295 14 119 5.95e-21 92.4
MS.gene050248.t1 AT5G61420 45.631 103 54 2 192 292 14 116 6.62e-21 94.0
MS.gene050248.t1 AT3G01140 43.689 103 56 2 192 292 57 159 6.64e-21 94.0
MS.gene050248.t1 AT5G26660 35.374 147 79 4 202 345 5 138 6.65e-21 93.2
MS.gene050248.t1 AT5G14340 42.342 111 58 3 192 300 26 132 7.69e-21 92.0
MS.gene050248.t1 AT5G07700 44.660 103 55 2 192 292 14 116 8.24e-21 93.2
MS.gene050248.t1 AT5G07700 44.660 103 55 2 192 292 14 116 8.24e-21 93.2
MS.gene050248.t1 AT5G39700 41.000 100 59 0 193 292 57 156 9.61e-21 89.7
MS.gene050248.t1 AT5G15310 42.718 103 57 2 192 292 14 116 1.17e-20 92.4
MS.gene050248.t1 AT5G15310 42.718 103 57 2 192 292 14 116 1.18e-20 92.4
MS.gene050248.t1 AT5G15310 42.718 103 57 2 192 292 14 116 1.71e-20 90.5
MS.gene050248.t1 AT3G01530 39.024 123 71 3 172 291 6 127 2.11e-20 89.4
MS.gene050248.t1 AT5G16600 45.192 104 53 3 192 292 14 116 3.21e-20 91.3
MS.gene050248.t1 AT1G79180 43.810 105 53 3 192 292 16 118 3.50e-20 90.5
MS.gene050248.t1 AT5G60890 43.396 106 58 2 192 295 14 119 4.70e-20 90.1
MS.gene050248.t1 AT1G16490 40.741 108 58 3 192 295 16 121 6.78e-20 89.4
MS.gene050248.t1 AT5G40350 44.792 96 50 2 192 285 19 113 7.79e-20 87.8
MS.gene050248.t1 AT1G74650 43.689 103 56 2 192 292 14 116 1.09e-19 89.7
MS.gene050248.t1 AT3G47600 41.748 103 58 2 192 292 14 116 1.34e-19 89.7
MS.gene050248.t1 AT5G14750 40.000 100 58 1 225 324 18 115 1.42e-19 85.9
MS.gene050248.t1 AT3G27810 44.792 96 50 2 192 285 22 116 1.42e-19 87.4
MS.gene050248.t1 AT5G62470 42.268 97 55 1 192 287 14 110 1.47e-19 89.7
MS.gene050248.t1 AT1G25340 45.918 98 50 2 190 285 18 114 1.74e-19 88.6
MS.gene050248.t1 AT3G62610 44.898 98 51 2 192 287 14 110 2.90e-19 89.0
MS.gene050248.t1 AT3G28910 42.453 106 55 3 192 293 14 117 3.04e-19 88.6
MS.gene050248.t1 AT1G08810 39.669 121 67 3 192 308 14 132 3.42e-19 87.4
MS.gene050248.t1 AT4G25560 42.268 97 55 1 192 287 12 108 3.45e-19 87.4
MS.gene050248.t1 AT3G12820 41.593 113 62 3 187 296 10 121 6.01e-19 85.9
MS.gene050248.t1 AT1G25340 43.750 96 50 1 190 285 18 109 6.46e-19 86.7
MS.gene050248.t1 AT2G47460 42.157 102 56 2 192 291 14 114 9.51e-19 87.8
MS.gene050248.t1 AT5G35550 48.684 76 37 1 218 291 44 119 1.23e-18 85.5
MS.gene050248.t1 AT5G62320 44.144 111 51 4 192 292 15 124 1.33e-18 85.1
MS.gene050248.t1 AT1G25340 43.750 96 50 1 190 285 18 109 1.62e-18 85.9
MS.gene050248.t1 AT5G49330 40.404 99 54 2 192 287 14 110 1.70e-18 86.7
MS.gene050248.t1 AT1G68320 42.708 96 52 2 192 285 21 115 1.95e-18 85.5
MS.gene050248.t1 AT4G37780 37.398 123 71 4 192 311 14 133 2.26e-18 85.5
MS.gene050248.t1 AT5G57620 40.367 109 62 3 192 297 14 122 2.30e-18 85.9
MS.gene050248.t1 AT1G14350 34.711 121 76 2 195 312 28 148 8.55e-18 85.5
MS.gene050248.t1 AT1G14350 34.711 121 76 2 195 312 28 148 8.55e-18 85.5
MS.gene050248.t1 AT5G23000 39.806 103 58 2 192 291 14 115 1.23e-17 84.0
MS.gene050248.t1 AT3G49690 40.909 110 61 3 192 297 14 123 1.29e-17 83.6
MS.gene050248.t1 AT5G65790 40.708 113 63 3 189 297 11 123 1.48e-17 84.0
MS.gene050248.t1 AT1G66380 42.268 97 55 1 192 287 10 106 2.38e-17 78.6
MS.gene050248.t1 AT5G52260 44.000 100 53 2 190 287 12 110 4.17e-17 81.3
MS.gene050248.t1 AT3G18100 40.000 100 58 2 187 285 490 588 4.52e-17 84.0
MS.gene050248.t1 AT3G18100 35.200 125 81 0 161 285 515 639 6.44e-16 80.5
MS.gene050248.t1 AT3G18100 40.000 100 58 2 187 285 442 540 5.55e-17 83.6
MS.gene050248.t1 AT3G18100 35.200 125 81 0 161 285 467 591 7.42e-16 80.1
MS.gene050248.t1 AT1G56650 41.237 97 56 1 192 287 10 106 5.62e-17 80.5
MS.gene050248.t1 AT3G18100 40.000 100 58 2 187 285 329 427 7.73e-17 83.2
MS.gene050248.t1 AT3G18100 35.200 125 81 0 161 285 354 478 1.03e-15 79.7
MS.gene050248.t1 AT3G18100 40.000 100 58 2 187 285 277 375 8.67e-17 82.8
MS.gene050248.t1 AT3G18100 35.200 125 81 0 161 285 302 426 1.11e-15 79.3
MS.gene050248.t1 AT3G12820 48.611 72 37 0 225 296 2 73 8.92e-17 78.6
MS.gene050248.t1 AT1G48000 40.000 95 56 1 192 285 34 128 9.58e-17 79.7
MS.gene050248.t1 AT1G79180 35.294 136 53 4 192 292 16 151 9.68e-17 81.3
MS.gene050248.t1 AT1G66390 42.268 97 55 1 192 287 10 106 1.73e-16 79.0
MS.gene050248.t1 AT3G53200 48.052 77 39 1 225 301 12 87 3.95e-16 77.0
MS.gene050248.t1 AT2G02820 34.021 97 64 0 195 291 33 129 6.44e-16 79.7
MS.gene050248.t1 AT5G49620 31.034 174 109 4 168 331 1 173 6.78e-16 78.6
MS.gene050248.t1 AT5G59780 48.000 75 38 1 225 299 23 96 7.11e-16 76.6
MS.gene050248.t1 AT2G02820 36.264 91 58 0 195 285 33 123 1.00e-15 79.3
MS.gene050248.t1 AT3G46130 48.000 75 38 1 225 299 23 96 1.72e-15 75.9
MS.gene050248.t1 AT2G02820 36.264 91 58 0 195 285 33 123 1.97e-15 77.4
MS.gene050248.t1 AT3G46130 48.000 75 38 1 225 299 13 86 2.00e-15 75.5
MS.gene050248.t1 AT3G06490 38.462 117 68 3 170 285 2 115 2.61e-15 77.0
MS.gene050248.t1 AT3G47600 47.826 69 35 1 225 292 42 110 3.11e-15 76.6
MS.gene050248.t1 AT2G37630 35.338 133 81 2 194 321 6 138 4.45e-15 76.6
MS.gene050248.t1 AT5G40350 49.180 61 31 0 225 285 8 68 8.13e-15 72.4
MS.gene050248.t1 AT3G27810 49.180 61 31 0 225 285 7 67 9.37e-15 72.4
MS.gene050248.t1 AT5G14750 37.079 89 54 1 236 324 2 88 1.64e-14 70.9
MS.gene050248.t1 AT5G14750 37.079 89 54 1 236 324 2 88 1.64e-14 70.9
MS.gene050248.t1 AT2G36890 38.532 109 64 3 189 294 11 119 2.56e-14 73.6
MS.gene050248.t1 AT2G36890 38.532 109 64 3 189 294 52 160 4.57e-14 73.2
MS.gene050248.t1 AT1G22640 53.448 58 26 1 236 292 2 59 6.70e-14 70.5
MS.gene050248.t1 AT3G23250 44.928 69 37 1 236 303 2 70 7.30e-13 68.2
MS.gene050248.t1 AT5G49620 28.723 188 109 5 168 331 1 187 1.07e-12 68.9
MS.gene050248.t1 AT1G09770 37.647 85 52 1 193 277 8 91 3.15e-12 68.9
MS.gene050248.t1 AT1G71030 37.500 64 40 0 228 291 5 68 5.93e-12 64.7
MS.gene050248.t1 AT1G71030 37.500 64 40 0 228 291 19 82 7.07e-12 64.7
MS.gene050248.t1 AT1G66380 47.619 63 33 0 225 287 11 73 1.10e-11 61.6

Find 116 sgRNAs with CRISPR-Local

Find 212 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTCTGAGCTTTCAAAATT+TGG 0.062051 7.1:-52927967 None:intergenic
TTAACACTAGCAAAGGAATT+TGG 0.154850 7.1:+52925076 MS.gene050248:CDS
GTCCAATTGGTGGATCAATT+TGG 0.216324 7.1:+52925544 MS.gene050248:CDS
GAATCCTCTTCCGCCGCTTT+TGG 0.241567 7.1:-52925293 None:intergenic
GTATGTCTTCCATCTTATTA+TGG 0.265624 7.1:-52925044 None:intergenic
AAGATCTTCTTTAAGTTGAT+TGG 0.271099 7.1:-52924863 None:intergenic
TCCAATTGGTGGATCAATTT+GGG 0.272796 7.1:+52925545 MS.gene050248:CDS
CTTTCATGCAATGATGGAAT+TGG 0.295338 7.1:+52925228 MS.gene050248:CDS
AGATCAATTTCTTGCTTAAG+AGG 0.316151 7.1:-52928144 None:intergenic
CCATCTTCGACCAAACATTA+AGG 0.321091 7.1:+52925642 MS.gene050248:CDS
ATCAATTTGGGCTTAGAAAA+TGG 0.323686 7.1:+52925557 MS.gene050248:CDS
GGTTCTTCCTCTTGGCATTT+AGG 0.324518 7.1:-52927825 None:intergenic
CATTGTCCCTTGATTTGATT+GGG 0.325873 7.1:-52925345 None:intergenic
GGCGTTCCAGTGGTTCTTGA+TGG 0.329167 7.1:-52927791 None:intergenic
AATTATGAGTTTGGATCATA+TGG 0.334435 7.1:+52928099 MS.gene050248:CDS
CCATTGTCCCTTGATTTGAT+TGG 0.338992 7.1:-52925346 None:intergenic
TAACACTAGCAAAGGAATTT+GGG 0.340281 7.1:+52925077 MS.gene050248:CDS
GGCATTTAGGCGGCGCTTAG+TGG 0.342982 7.1:-52927812 None:intergenic
TCTTCCATCTTATTATGGTT+TGG 0.349975 7.1:-52925039 None:intergenic
TCATTACCATTGAATGTCAT+TGG 0.362180 7.1:-52928045 None:intergenic
AACCCACAAATTTCGTTCTC+TGG 0.372683 7.1:-52928018 None:intergenic
AAGAATGACACCTTAATGTT+TGG 0.374739 7.1:-52925652 None:intergenic
TTGTAGGGTTCTTGTCCAAT+TGG 0.386156 7.1:+52925531 MS.gene050248:intron
TTTGTTCCAATGACATTCAA+TGG 0.400640 7.1:+52928039 MS.gene050248:CDS
GAAAACAATGCAGAGATAGA+TGG 0.411884 7.1:+52925614 MS.gene050248:CDS
AAATTCCTTTGCTAGTGTTA+AGG 0.414690 7.1:-52925074 None:intergenic
ACTACTTCTAAAATACATAA+TGG 0.416714 7.1:+52927870 MS.gene050248:CDS
ACCATGATGAATTATGAGTT+TGG 0.416825 7.1:+52928090 MS.gene050248:CDS
CTTACCTCGGTTCTTCCTCT+TGG 0.419409 7.1:-52927833 None:intergenic
AAGTTTCTGAAAGGCAGAAT+TGG 0.420799 7.1:+52925592 MS.gene050248:CDS
ATCGAAGCTCACAAAATAGT+TGG 0.441695 7.1:+52927718 MS.gene050248:CDS
TAGGGTTCTTGTCCAATTGG+TGG 0.446482 7.1:+52925534 MS.gene050248:intron
GAAAGATCTCCTTGAAGCTC+AGG 0.449302 7.1:-52925210 None:intergenic
ATGACATTCAATGGTAATGA+TGG 0.449667 7.1:+52928048 MS.gene050248:CDS
CCTTAATGTTTGGTCGAAGA+TGG 0.450935 7.1:-52925642 None:intergenic
TAAGTTGATTGGACTGACTT+TGG 0.453366 7.1:-52924852 None:intergenic
GCCCAAATTGATCCACCAAT+TGG 0.455221 7.1:-52925546 None:intergenic
TCAGTTAATCCTGAGCTTCA+AGG 0.459950 7.1:+52925201 MS.gene050248:CDS
TTCCAGAGAACGAAATTTGT+GGG 0.460640 7.1:+52928016 MS.gene050248:CDS
TAGCCTTGTACCGATGGGTT+GGG 0.464899 7.1:-52924957 None:intergenic
GAAATTTCAAGAAGATTGCC+AGG 0.467461 7.1:+52927754 MS.gene050248:CDS
GATGGAATGGCAAGTGGATC+TGG 0.471586 7.1:+52928066 MS.gene050248:CDS
TAAGCAAGAAATTGATCTCA+TGG 0.473623 7.1:+52928149 MS.gene050248:CDS
CAATGCTAAGGAAGTTGAAA+AGG 0.475917 7.1:+52927900 MS.gene050248:CDS
TGGGTTGGGATCAGAGGGAA+TGG 0.478863 7.1:-52924943 None:intergenic
TGGTTTGGTGTAAAGACCAT+TGG 0.479856 7.1:-52925024 None:intergenic
TCTTGCTTAAGAGGAACCTC+AGG 0.484485 7.1:-52928135 None:intergenic
ATGATGATTCCTTCTCAACT+AGG 0.489341 7.1:+52924784 MS.gene050248:CDS
GATCAGAGGGAATGGGCTGA+TGG 0.489794 7.1:-52924935 None:intergenic
GTGACCAAAAGCGGCGGAAG+AGG 0.490487 7.1:+52925289 MS.gene050248:CDS
AACCGAGGTAAGAGTTCAAA+GGG 0.493375 7.1:+52927844 MS.gene050248:CDS
TATGATTTCAGAAAGATTCG+TGG 0.494440 7.1:+52927671 MS.gene050248:intron
TGGTGAAACTTCGCAACCTC+GGG 0.496923 7.1:+52925128 MS.gene050248:CDS
CTTTCAGAAACTTAGCAATA+CGG 0.498946 7.1:-52925582 None:intergenic
GGAGATCTTTCATGCAATGA+TGG 0.500133 7.1:+52925222 MS.gene050248:CDS
GATCCCAACCCATCGGTACA+AGG 0.510524 7.1:+52924954 MS.gene050248:CDS
CAAGGATCCCAATCAAATCA+AGG 0.510784 7.1:+52925338 MS.gene050248:CDS
TCCCTCTCTATCACCATCAC+TGG 0.513990 7.1:+52925155 MS.gene050248:CDS
ATCAGAGGGAATGGGCTGAT+GGG 0.518178 7.1:-52924934 None:intergenic
ACAAGGCTACTCACACCAAT+GGG 0.518281 7.1:+52924971 MS.gene050248:CDS
TCCCCTTTGAACTCTTACCT+CGG 0.521132 7.1:-52927846 None:intergenic
GGGAATGGGCTGATGGGCAA+AGG 0.528512 7.1:-52924928 None:intergenic
ATTCCAGAGAACGAAATTTG+TGG 0.531565 7.1:+52928015 MS.gene050248:CDS
ATGGAGTTCTCAGTGCGCCC+TGG 0.535313 7.1:-52927772 None:intergenic
TACCGATGGGTTGGGATCAG+AGG 0.535676 7.1:-52924949 None:intergenic
TGTGAGTAGCCTTGTACCGA+TGG 0.538156 7.1:-52924963 None:intergenic
ACAAAATAGTTGGAAACAAG+TGG 0.538861 7.1:+52927728 MS.gene050248:CDS
TTTCAGAAACTTAGCAATAC+GGG 0.540409 7.1:-52925581 None:intergenic
AGAACTCCATCAAGAACCAC+TGG 0.541811 7.1:+52927785 MS.gene050248:CDS
GAATTCTCTCTGAGACCCAT+TGG 0.546774 7.1:-52924986 None:intergenic
GGGTTGGGATCAGAGGGAAT+GGG 0.550257 7.1:-52924942 None:intergenic
TACAAGGCTACTCACACCAA+TGG 0.551027 7.1:+52924970 MS.gene050248:CDS
TACACCAAACCATAATAAGA+TGG 0.551181 7.1:+52925035 MS.gene050248:CDS
AATGGAAGTCATCAATGCTA+AGG 0.554756 7.1:+52927888 MS.gene050248:CDS
TGAGTTTGGATCATATGGAA+TGG 0.555173 7.1:+52928104 MS.gene050248:CDS
GTAGCCTTGTACCGATGGGT+TGG 0.557641 7.1:-52924958 None:intergenic
ATATTTGAACCTAGTTGAGA+AGG 0.559154 7.1:-52924793 None:intergenic
ATGGTGAAACTTCGCAACCT+CGG 0.562590 7.1:+52925127 MS.gene050248:CDS
ATTCAATGGTAATGATGGAA+TGG 0.566386 7.1:+52928053 MS.gene050248:CDS
CGTATTGCTAAGTTTCTGAA+AGG 0.570187 7.1:+52925583 MS.gene050248:CDS
GGCGCTTAGTGGCGTTCCAG+TGG 0.578401 7.1:-52927801 None:intergenic
TCCAAACTCATAATTCATCA+TGG 0.580265 7.1:-52928091 None:intergenic
CCAATCAAATCAAGGGACAA+TGG 0.585514 7.1:+52925346 MS.gene050248:CDS
ACCGATGGGTTGGGATCAGA+GGG 0.587766 7.1:-52924948 None:intergenic
GAACCGAGGTAAGAGTTCAA+AGG 0.588626 7.1:+52927843 MS.gene050248:CDS
TAGTTGAGAAGGAATCATCA+TGG 0.595698 7.1:-52924782 None:intergenic
AGCCAGTGATGGTGATAGAG+AGG 0.597458 7.1:-52925157 None:intergenic
TATGTGGTGTAATGTGATGG+TGG 0.597872 7.1:-52924823 None:intergenic
CATCAGTGCTCAAAATCCAA+TGG 0.604920 7.1:+52925008 MS.gene050248:CDS
AGTTGAGAAGGAATCATCAT+GGG 0.606652 7.1:-52924781 None:intergenic
AAATATGTGGTGTAATGTGA+TGG 0.608872 7.1:-52924826 None:intergenic
GACGTATTCTATGAGCATGA+TGG 0.609671 7.1:+52927930 MS.gene050248:CDS
GGGACAATGGACTTCAAATG+AGG 0.612328 7.1:+52925359 MS.gene050248:CDS
TCCCTCTGATCCCAACCCAT+CGG 0.613237 7.1:+52924947 MS.gene050248:CDS
GCCAGTGATGGTGATAGAGA+GGG 0.617589 7.1:-52925156 None:intergenic
GGTCGCCTTAACACTAGCAA+AGG 0.621057 7.1:+52925069 MS.gene050248:CDS
CTGACTTTGGTACAAATATG+TGG 0.626211 7.1:-52924839 None:intergenic
AAGGATCCCAATCAAATCAA+GGG 0.629321 7.1:+52925339 MS.gene050248:CDS
AGATTCGTGGACCGAAGAGG+AGG 0.630809 7.1:+52927684 MS.gene050248:CDS
GAAAGATTCGTGGACCGAAG+AGG 0.631996 7.1:+52927681 MS.gene050248:intron
GGTAATGATGGAATGGCAAG+TGG 0.632233 7.1:+52928060 MS.gene050248:CDS
AATAAGATGGAAGACATACA+TGG 0.632344 7.1:+52925048 MS.gene050248:CDS
TCGTGCTCAGTGACCAAAAG+CGG 0.634605 7.1:+52925280 MS.gene050248:CDS
TAATAATGAAATTCAACACA+AGG 0.640392 7.1:+52925320 MS.gene050248:CDS
ATGCTCATAGAATACGTCAT+CGG 0.644204 7.1:-52927925 None:intergenic
AATGGACTTCAAATGAGGAT+CGG 0.644601 7.1:+52925364 MS.gene050248:CDS
AAATTTCAAGAAGATTGCCA+GGG 0.649002 7.1:+52927755 MS.gene050248:CDS
TGCTCAGTGACCAAAAGCGG+CGG 0.658516 7.1:+52925283 MS.gene050248:CDS
GTGGTGTAATGTGATGGTGG+AGG 0.664794 7.1:-52924820 None:intergenic
GTGAGTAGCCTTGTACCGAT+GGG 0.667463 7.1:-52924962 None:intergenic
TCTTCCTCTTGGCATTTAGG+CGG 0.677072 7.1:-52927822 None:intergenic
TGTGCATCATAAGCCAGTGA+TGG 0.698342 7.1:-52925168 None:intergenic
GATAGAGAGGGACTTACCCG+AGG 0.707182 7.1:-52925144 None:intergenic
AGCGCCGCCTAAATGCCAAG+AGG 0.709993 7.1:+52927818 MS.gene050248:CDS
ACCGAGGTAAGAGTTCAAAG+GGG 0.778877 7.1:+52927845 MS.gene050248:CDS
AATGCCAAGAGGAAGAACCG+AGG 0.780461 7.1:+52927829 MS.gene050248:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTACCAAAATTAAAAAT+AGG - chr7.1:52926526-52926545 None:intergenic 10.0%
!! ATATTAATTAAAAACACTTA+TGG - chr7.1:52926172-52926191 None:intergenic 10.0%
!! ATTCATAAATACTTATTAAA+TGG - chr7.1:52927209-52927228 None:intergenic 10.0%
!!! AAGTGTTTTTAATTAATATT+TGG + chr7.1:52926173-52926192 MS.gene050248:intron 10.0%
!!! AGTGTTTTTAATTAATATTT+GGG + chr7.1:52926174-52926193 MS.gene050248:intron 10.0%
!!! ATAATTGTTTTTATTTTTGT+AGG + chr7.1:52925515-52925534 MS.gene050248:intron 10.0%
!!! CTCTAAAAAAAATTTAAAAA+TGG - chr7.1:52926358-52926377 None:intergenic 10.0%
!!! TAATTGTTTTTATTTTTGTA+GGG + chr7.1:52925516-52925535 MS.gene050248:intron 10.0%
!!! TATTTTTATATAATCAATGT+AGG - chr7.1:52926626-52926645 None:intergenic 10.0%
!! AAATAAAACGAAAAAGATTA+TGG + chr7.1:52925810-52925829 MS.gene050248:intron 15.0%
!! GGTTAATTATATTTAATGTA+CGG - chr7.1:52927623-52927642 None:intergenic 15.0%
!! TAGTTTAATAAACATTTCAT+TGG + chr7.1:52925922-52925941 MS.gene050248:intron 15.0%
!! TGTAAAAATCAAATATGTTA+AGG - chr7.1:52925770-52925789 None:intergenic 15.0%
!!! AATAACAATTGGTTATATTT+TGG - chr7.1:52927407-52927426 None:intergenic 15.0%
!!! GTGTTTTTAATTAATATTTG+GGG + chr7.1:52926175-52926194 MS.gene050248:intron 15.0%
!!! TCTTTACCTATTTTTAATTT+TGG + chr7.1:52926517-52926536 MS.gene050248:intron 15.0%
!!! TGTTTTTAATTAATATTTGG+GGG + chr7.1:52926176-52926195 MS.gene050248:intron 15.0%
!! AAAGAGTAAAGTTATAAGAA+TGG - chr7.1:52926771-52926790 None:intergenic 20.0%
!! ACAAAAAATCTCTTTCAATA+TGG + chr7.1:52925108-52925127 MS.gene050248:CDS 20.0%
!! ATACTAGAGATAAAGTATAT+AGG - chr7.1:52927003-52927022 None:intergenic 20.0%
!! TAAAAAAACAAATGAGAGTT+TGG - chr7.1:52926692-52926711 None:intergenic 20.0%
!! TAATAATGAAATTCAACACA+AGG + chr7.1:52925320-52925339 MS.gene050248:CDS 20.0%
!! TCAAATAGTTTATCATACAT+TGG + chr7.1:52927310-52927329 MS.gene050248:intron 20.0%
!! TTAAACTTTACTAAATTCGT+AGG + chr7.1:52927359-52927378 MS.gene050248:intron 20.0%
!! TTTATAAAGAAAAGCAGAAT+TGG + chr7.1:52925887-52925906 MS.gene050248:intron 20.0%
!!! AAAAATTAGTTCTTGATGAT+AGG - chr7.1:52926043-52926062 None:intergenic 20.0%
!!! ACTACTTCTAAAATACATAA+TGG + chr7.1:52927870-52927889 MS.gene050248:CDS 20.0%
!!! GTTAATTTGTTAGTATTTGA+TGG + chr7.1:52926724-52926743 MS.gene050248:intron 20.0%
!!! GTTTTTAATTAATATTTGGG+GGG + chr7.1:52926177-52926196 MS.gene050248:intron 20.0%
!!! TAAATTTTTTTTAGAGCAAG+TGG + chr7.1:52926362-52926381 MS.gene050248:intron 20.0%
!!! TATTTTGTTAGATAGCTAAT+TGG + chr7.1:52927561-52927580 MS.gene050248:intron 20.0%
!!! TCCACATGAATTATTTTTAA+AGG - chr7.1:52927088-52927107 None:intergenic 20.0%
!!! TCCTTTAAAAATAATTCATG+TGG + chr7.1:52927084-52927103 MS.gene050248:intron 20.0%
!!! TGAATTATTTTTAAAGGAAG+TGG - chr7.1:52927082-52927101 None:intergenic 20.0%
!!! TTTTATGAATTAAAGTGCAA+AGG - chr7.1:52926435-52926454 None:intergenic 20.0%
!!! TTTTTTTTTTGAGATAGTCA+CGG + chr7.1:52926231-52926250 MS.gene050248:intron 20.0%
! AAAAAAATCCCTAAGAAACA+AGG - chr7.1:52926212-52926231 None:intergenic 25.0%
! AAAAAATCCCTAAGAAACAA+GGG - chr7.1:52926211-52926230 None:intergenic 25.0%
! AAAACAAAAACACATGTGAA+AGG - chr7.1:52926599-52926618 None:intergenic 25.0%
! AACACCAATTTAACACATAT+AGG - chr7.1:52927456-52927475 None:intergenic 25.0%
! AACACTTATGGATAAAACTT+AGG - chr7.1:52926160-52926179 None:intergenic 25.0%
! AATTATGAGTTTGGATCATA+TGG + chr7.1:52928099-52928118 MS.gene050248:CDS 25.0%
! ATCATACATAACAATATGTG+TGG - chr7.1:52927657-52927676 None:intergenic 25.0%
! CCAATTGTATGAATAACAAT+TGG - chr7.1:52927418-52927437 None:intergenic 25.0%
! TATGCCTATATGTGTTAAAT+TGG + chr7.1:52927449-52927468 MS.gene050248:intron 25.0%
! TCATACATAACAATATGTGT+GGG - chr7.1:52927656-52927675 None:intergenic 25.0%
! TTTAACACATATAGGCATAT+TGG - chr7.1:52927448-52927467 None:intergenic 25.0%
!! ATTATTTACCCTTGTTTCTT+AGG + chr7.1:52926200-52926219 MS.gene050248:intron 25.0%
!! CATTCTTTTGAATCATTTCT+GGG + chr7.1:52925668-52925687 MS.gene050248:intron 25.0%
!! CCAATTGTTATTCATACAAT+TGG + chr7.1:52927415-52927434 MS.gene050248:intron 25.0%
!! GAATTTTCCTGTTGTTAAAT+TGG + chr7.1:52927477-52927496 MS.gene050248:intron 25.0%
!! TAAAGAAGATCTTTTGAATG+AGG + chr7.1:52924873-52924892 MS.gene050248:CDS 25.0%
!! TCATTCTTTTGAATCATTTC+TGG + chr7.1:52925667-52925686 MS.gene050248:intron 25.0%
!! TTATTTACCCTTGTTTCTTA+GGG + chr7.1:52926201-52926220 MS.gene050248:intron 25.0%
!! TTGTTTGAAATCTAGTATTG+AGG + chr7.1:52926471-52926490 MS.gene050248:intron 25.0%
!!! AAGATCTTCTTTAAGTTGAT+TGG - chr7.1:52924866-52924885 None:intergenic 25.0%
!!! AATTTGTTAGTATTTGATGG+AGG + chr7.1:52926727-52926746 MS.gene050248:intron 25.0%
AAAATAGACAACTAGACTAG+TGG - chr7.1:52925977-52925996 None:intergenic 30.0%
AAATATGTGGTGTAATGTGA+TGG - chr7.1:52924829-52924848 None:intergenic 30.0%
AAATTCCTTTGCTAGTGTTA+AGG - chr7.1:52925077-52925096 None:intergenic 30.0%
AAATTTCAAGAAGATTGCCA+GGG + chr7.1:52927755-52927774 MS.gene050248:CDS 30.0%
AAGAATGACACCTTAATGTT+TGG - chr7.1:52925655-52925674 None:intergenic 30.0%
AATAAGATGGAAGACATACA+TGG + chr7.1:52925048-52925067 MS.gene050248:CDS 30.0%
ACAAAATAGTTGGAAACAAG+TGG + chr7.1:52927728-52927747 MS.gene050248:CDS 30.0%
ACCATGATGAATTATGAGTT+TGG + chr7.1:52928090-52928109 MS.gene050248:CDS 30.0%
AGATATTCAACTTCAAGTGT+TGG - chr7.1:52927248-52927267 None:intergenic 30.0%
AGATCAATTTCTTGCTTAAG+AGG - chr7.1:52928147-52928166 None:intergenic 30.0%
ATATTTGAACCTAGTTGAGA+AGG - chr7.1:52924796-52924815 None:intergenic 30.0%
ATCAATTTGGGCTTAGAAAA+TGG + chr7.1:52925557-52925576 MS.gene050248:CDS 30.0%
ATGAATTAAAGTGCAAAGGA+AGG - chr7.1:52926431-52926450 None:intergenic 30.0%
CTAAAAAAGCAAGAGATCTA+AGG - chr7.1:52926274-52926293 None:intergenic 30.0%
CTTACAAATGAGAGATACAA+GGG - chr7.1:52926824-52926843 None:intergenic 30.0%
CTTTCAGAAACTTAGCAATA+CGG - chr7.1:52925585-52925604 None:intergenic 30.0%
GGAAAAATTGTACAAGAAGA+GGG - chr7.1:52926337-52926356 None:intergenic 30.0%
GTATGTCTTCCATCTTATTA+TGG - chr7.1:52925047-52925066 None:intergenic 30.0%
TAACACTAGCAAAGGAATTT+GGG + chr7.1:52925077-52925096 MS.gene050248:CDS 30.0%
TAAGCAAGAAATTGATCTCA+TGG + chr7.1:52928149-52928168 MS.gene050248:CDS 30.0%
TACACCAAACCATAATAAGA+TGG + chr7.1:52925035-52925054 MS.gene050248:CDS 30.0%
TATGATTTCAGAAAGATTCG+TGG + chr7.1:52927671-52927690 MS.gene050248:intron 30.0%
TCAAACACCAATTTAACAAC+AGG - chr7.1:52927487-52927506 None:intergenic 30.0%
TCATTACCATTGAATGTCAT+TGG - chr7.1:52928048-52928067 None:intergenic 30.0%
TCCAAACTCATAATTCATCA+TGG - chr7.1:52928094-52928113 None:intergenic 30.0%
TCTTACAAATGAGAGATACA+AGG - chr7.1:52926825-52926844 None:intergenic 30.0%
TCTTCCATCTTATTATGGTT+TGG - chr7.1:52925042-52925061 None:intergenic 30.0%
TGGAAAAATTGTACAAGAAG+AGG - chr7.1:52926338-52926357 None:intergenic 30.0%
TGTAAAATCAAGACACAAGA+CGG - chr7.1:52926965-52926984 None:intergenic 30.0%
TTAACACTAGCAAAGGAATT+TGG + chr7.1:52925076-52925095 MS.gene050248:CDS 30.0%
TTCTCTGAGCTTTCAAAATT+TGG - chr7.1:52927970-52927989 None:intergenic 30.0%
TTTCAGAAACTTAGCAATAC+GGG - chr7.1:52925584-52925603 None:intergenic 30.0%
TTTGTTCCAATGACATTCAA+TGG + chr7.1:52928039-52928058 MS.gene050248:CDS 30.0%
! ATGACATTCAATGGTAATGA+TGG + chr7.1:52928048-52928067 MS.gene050248:CDS 30.0%
! ATTCAATGGTAATGATGGAA+TGG + chr7.1:52928053-52928072 MS.gene050248:CDS 30.0%
! CGAATTGTTGATCATTTTCT+CGG - chr7.1:52925263-52925282 None:intergenic 30.0%
! GAATTGTTGATCATTTTCTC+GGG - chr7.1:52925262-52925281 None:intergenic 30.0%
!! ATATGTGTGGGTTAGATATA+TGG - chr7.1:52927644-52927663 None:intergenic 30.0%
!!! CACGAGTTTTTTTCACTTAA+TGG + chr7.1:52926665-52926684 MS.gene050248:intron 30.0%
!!! CTGTTTTTGTACTTTTTCGA+GGG + chr7.1:52926299-52926318 MS.gene050248:intron 30.0%
!!! GAGAATGATTTTAGAACTGA+AGG + chr7.1:52927985-52928004 MS.gene050248:CDS 30.0%
!!! TAATCTTTTTTCCTCCTCTT+CGG - chr7.1:52927698-52927717 None:intergenic 30.0%
!!! TCTGTTTTTGTACTTTTTCG+AGG + chr7.1:52926298-52926317 MS.gene050248:intron 30.0%
!!! TGATTTTAGAACTGAAGGTT+TGG + chr7.1:52927990-52928009 MS.gene050248:CDS 30.0%
!!! TTTTTTAGAGCAAGTGGTAT+AGG + chr7.1:52926368-52926387 MS.gene050248:intron 30.0%
AAGGATCCCAATCAAATCAA+GGG + chr7.1:52925339-52925358 MS.gene050248:CDS 35.0%
AATGGAAGTCATCAATGCTA+AGG + chr7.1:52927888-52927907 MS.gene050248:CDS 35.0%
AGAAAAACTAGAGTGATGGT+TGG - chr7.1:52924899-52924918 None:intergenic 35.0%
AGAGATACAAGGGAGTTATA+AGG - chr7.1:52926814-52926833 None:intergenic 35.0%
ATCGAAGCTCACAAAATAGT+TGG + chr7.1:52927718-52927737 MS.gene050248:CDS 35.0%
ATGATGATTCCTTCTCAACT+AGG + chr7.1:52924784-52924803 MS.gene050248:CDS 35.0%
ATGCTCATAGAATACGTCAT+CGG - chr7.1:52927928-52927947 None:intergenic 35.0%
ATTCCAGAGAACGAAATTTG+TGG + chr7.1:52928015-52928034 MS.gene050248:CDS 35.0%
CAATGCTAAGGAAGTTGAAA+AGG + chr7.1:52927900-52927919 MS.gene050248:CDS 35.0%
CGTATTGCTAAGTTTCTGAA+AGG + chr7.1:52925583-52925602 MS.gene050248:CDS 35.0%
CTGACTTTGGTACAAATATG+TGG - chr7.1:52924842-52924861 None:intergenic 35.0%
GAAAACAATGCAGAGATAGA+TGG + chr7.1:52925614-52925633 MS.gene050248:CDS 35.0%
GAAATTTCAAGAAGATTGCC+AGG + chr7.1:52927754-52927773 MS.gene050248:CDS 35.0%
TATCTCTAGTATGTGACTCT+TGG + chr7.1:52927011-52927030 MS.gene050248:intron 35.0%
TGAGTTTGGATCATATGGAA+TGG + chr7.1:52928104-52928123 MS.gene050248:CDS 35.0%
TTCCAGAGAACGAAATTTGT+GGG + chr7.1:52928016-52928035 MS.gene050248:CDS 35.0%
TTGCAGAAAAACTAGAGTGA+TGG - chr7.1:52924903-52924922 None:intergenic 35.0%
! AAGTTTCTGAAAGGCAGAAT+TGG + chr7.1:52925592-52925611 MS.gene050248:CDS 35.0%
! AATGGACTTCAAATGAGGAT+CGG + chr7.1:52925364-52925383 MS.gene050248:CDS 35.0%
! CATTGTCCCTTGATTTGATT+GGG - chr7.1:52925348-52925367 None:intergenic 35.0%
! CTTTCATGCAATGATGGAAT+TGG + chr7.1:52925228-52925247 MS.gene050248:CDS 35.0%
! TCCAATTGGTGGATCAATTT+GGG + chr7.1:52925545-52925564 MS.gene050248:CDS 35.0%
!! TAAGTTGATTGGACTGACTT+TGG - chr7.1:52924855-52924874 None:intergenic 35.0%
!!! TCACTCTAGTTTTTCTGCAA+TGG + chr7.1:52924903-52924922 MS.gene050248:CDS 35.0%
!!! TTGTACTTTTTCGAGGGTTT+TGG + chr7.1:52926305-52926324 MS.gene050248:intron 35.0%
AACCCACAAATTTCGTTCTC+TGG - chr7.1:52928021-52928040 None:intergenic 40.0%
AACCGAGGTAAGAGTTCAAA+GGG + chr7.1:52927844-52927863 MS.gene050248:CDS 40.0%
AGGGAGTTATAAGGTTGACT+TGG - chr7.1:52926805-52926824 None:intergenic 40.0%
CAAGGATCCCAATCAAATCA+AGG + chr7.1:52925338-52925357 MS.gene050248:CDS 40.0%
CATCAGTGCTCAAAATCCAA+TGG + chr7.1:52925008-52925027 MS.gene050248:CDS 40.0%
CCAATCAAATCAAGGGACAA+TGG + chr7.1:52925346-52925365 MS.gene050248:CDS 40.0%
CCATCTTCGACCAAACATTA+AGG + chr7.1:52925642-52925661 MS.gene050248:CDS 40.0%
CCTTAATGTTTGGTCGAAGA+TGG - chr7.1:52925645-52925664 None:intergenic 40.0%
GACGTATTCTATGAGCATGA+TGG + chr7.1:52927930-52927949 MS.gene050248:CDS 40.0%
GGAGATCTTTCATGCAATGA+TGG + chr7.1:52925222-52925241 MS.gene050248:CDS 40.0%
TATGTGGTGTAATGTGATGG+TGG - chr7.1:52924826-52924845 None:intergenic 40.0%
TCAGTTAATCCTGAGCTTCA+AGG + chr7.1:52925201-52925220 MS.gene050248:CDS 40.0%
TTGTAGGGTTCTTGTCCAAT+TGG + chr7.1:52925531-52925550 MS.gene050248:intron 40.0%
! CATCAATTTTGTTCTCCGCA+CGG + chr7.1:52927511-52927530 MS.gene050248:intron 40.0%
! CCATTGTCCCTTGATTTGAT+TGG - chr7.1:52925349-52925368 None:intergenic 40.0%
! GTATCGATCATAAGCTTACG+TGG - chr7.1:52927278-52927297 None:intergenic 40.0%
! GTCCAATTGGTGGATCAATT+TGG + chr7.1:52925544-52925563 MS.gene050248:CDS 40.0%
!! GAGTTATAAGGTTGACTTGG+TGG - chr7.1:52926802-52926821 None:intergenic 40.0%
!! TGGTTTGGTGTAAAGACCAT+TGG - chr7.1:52925027-52925046 None:intergenic 40.0%
!!! CTTTTTCGAGGGTTTTGGTT+TGG + chr7.1:52926310-52926329 MS.gene050248:intron 40.0%
!!! TGGAATGGAGTTTTTTCCTG+AGG + chr7.1:52928119-52928138 MS.gene050248:CDS 40.0%
AAGTGGTATAGGATAGAGGC+TGG + chr7.1:52926379-52926398 MS.gene050248:intron 45.0%
ACAAGGCTACTCACACCAAT+GGG + chr7.1:52924971-52924990 MS.gene050248:CDS 45.0%
ACACGTATTTGTTCCCACAG+TGG - chr7.1:52927539-52927558 None:intergenic 45.0%
ACCGAGGTAAGAGTTCAAAG+GGG + chr7.1:52927845-52927864 MS.gene050248:CDS 45.0%
AGAACTCCATCAAGAACCAC+TGG + chr7.1:52927785-52927804 MS.gene050248:CDS 45.0%
ATGGTGAAACTTCGCAACCT+CGG + chr7.1:52925127-52925146 MS.gene050248:CDS 45.0%
GAAAGATCTCCTTGAAGCTC+AGG - chr7.1:52925213-52925232 None:intergenic 45.0%
GAACCGAGGTAAGAGTTCAA+AGG + chr7.1:52927843-52927862 MS.gene050248:CDS 45.0%
GAGCAAGTGGTATAGGATAG+AGG + chr7.1:52926375-52926394 MS.gene050248:intron 45.0%
GCCCAAATTGATCCACCAAT+TGG - chr7.1:52925549-52925568 None:intergenic 45.0%
GGTTCTTCCTCTTGGCATTT+AGG - chr7.1:52927828-52927847 None:intergenic 45.0%
TACAAGGCTACTCACACCAA+TGG + chr7.1:52924970-52924989 MS.gene050248:CDS 45.0%
TAGGGTTCTTGTCCAATTGG+TGG + chr7.1:52925534-52925553 MS.gene050248:intron 45.0%
TCCCCTTTGAACTCTTACCT+CGG - chr7.1:52927849-52927868 None:intergenic 45.0%
TCTTCCTCTTGGCATTTAGG+CGG - chr7.1:52927825-52927844 None:intergenic 45.0%
TCTTGCTTAAGAGGAACCTC+AGG - chr7.1:52928138-52928157 None:intergenic 45.0%
TGTGCATCATAAGCCAGTGA+TGG - chr7.1:52925171-52925190 None:intergenic 45.0%
! GGGACAATGGACTTCAAATG+AGG + chr7.1:52925359-52925378 MS.gene050248:CDS 45.0%
! GGTAATGATGGAATGGCAAG+TGG + chr7.1:52928060-52928079 MS.gene050248:CDS 45.0%
!! AAGTGCAAAGGAAGGCATCA+AGG - chr7.1:52926423-52926442 None:intergenic 45.0%
!! AGTGCAAAGGAAGGCATCAA+GGG - chr7.1:52926422-52926441 None:intergenic 45.0%
!! GAATTCTCTCTGAGACCCAT+TGG - chr7.1:52924989-52925008 None:intergenic 45.0%
!! ATAAAAAAAAAATATAATCA+AGG - chr7.1:52925459-52925478 None:intergenic 5.0%
AATGCCAAGAGGAAGAACCG+AGG + chr7.1:52927829-52927848 MS.gene050248:CDS 50.0%
CTTACCTCGGTTCTTCCTCT+TGG - chr7.1:52927836-52927855 None:intergenic 50.0%
GAAAGATTCGTGGACCGAAG+AGG + chr7.1:52927681-52927700 MS.gene050248:intron 50.0%
GATGGAATGGCAAGTGGATC+TGG + chr7.1:52928066-52928085 MS.gene050248:CDS 50.0%
GGTCGCCTTAACACTAGCAA+AGG + chr7.1:52925069-52925088 MS.gene050248:CDS 50.0%
GTATAGGATAGAGGCTGGCA+GGG + chr7.1:52926384-52926403 MS.gene050248:intron 50.0%
TCCCTCTCTATCACCATCAC+TGG + chr7.1:52925155-52925174 MS.gene050248:CDS 50.0%
TCGTGCTCAGTGACCAAAAG+CGG + chr7.1:52925280-52925299 MS.gene050248:CDS 50.0%
TGGTGAAACTTCGCAACCTC+GGG + chr7.1:52925128-52925147 MS.gene050248:CDS 50.0%
! AGCCAGTGATGGTGATAGAG+AGG - chr7.1:52925160-52925179 None:intergenic 50.0%
! GCCAGTGATGGTGATAGAGA+GGG - chr7.1:52925159-52925178 None:intergenic 50.0%
!! ATCAGAGGGAATGGGCTGAT+GGG - chr7.1:52924937-52924956 None:intergenic 50.0%
!! GTGAGTAGCCTTGTACCGAT+GGG - chr7.1:52924965-52924984 None:intergenic 50.0%
!! GTGCAAAGGAAGGCATCAAG+GGG - chr7.1:52926421-52926440 None:intergenic 50.0%
!! GTGGTGTAATGTGATGGTGG+AGG - chr7.1:52924823-52924842 None:intergenic 50.0%
!! TAGCCTTGTACCGATGGGTT+GGG - chr7.1:52924960-52924979 None:intergenic 50.0%
!! TGTGAGTAGCCTTGTACCGA+TGG - chr7.1:52924966-52924985 None:intergenic 50.0%
AGATTCGTGGACCGAAGAGG+AGG + chr7.1:52927684-52927703 MS.gene050248:CDS 55.0%
GATAGAGAGGGACTTACCCG+AGG - chr7.1:52925147-52925166 None:intergenic 55.0%
GATCCCAACCCATCGGTACA+AGG + chr7.1:52924954-52924973 MS.gene050248:CDS 55.0%
GGCGTTCCAGTGGTTCTTGA+TGG - chr7.1:52927794-52927813 None:intergenic 55.0%
GGGTTGGGATCAGAGGGAAT+GGG - chr7.1:52924945-52924964 None:intergenic 55.0%
GGTATAGGATAGAGGCTGGC+AGG + chr7.1:52926383-52926402 MS.gene050248:intron 55.0%
TCCCTCTGATCCCAACCCAT+CGG + chr7.1:52924947-52924966 MS.gene050248:CDS 55.0%
TGCTCAGTGACCAAAAGCGG+CGG + chr7.1:52925283-52925302 MS.gene050248:CDS 55.0%
! TGGGTTGGGATCAGAGGGAA+TGG - chr7.1:52924946-52924965 None:intergenic 55.0%
!! ACCGATGGGTTGGGATCAGA+GGG - chr7.1:52924951-52924970 None:intergenic 55.0%
!! GAAGGCATCAAGGGGCAACT+AGG - chr7.1:52926413-52926432 None:intergenic 55.0%
!! GAATCCTCTTCCGCCGCTTT+TGG - chr7.1:52925296-52925315 None:intergenic 55.0%
!! GATCAGAGGGAATGGGCTGA+TGG - chr7.1:52924938-52924957 None:intergenic 55.0%
!! GTAGCCTTGTACCGATGGGT+TGG - chr7.1:52924961-52924980 None:intergenic 55.0%
!! TACCGATGGGTTGGGATCAG+AGG - chr7.1:52924952-52924971 None:intergenic 55.0%
AGCGCCGCCTAAATGCCAAG+AGG + chr7.1:52927818-52927837 MS.gene050248:CDS 60.0%
ATGGAGTTCTCAGTGCGCCC+TGG - chr7.1:52927775-52927794 None:intergenic 60.0%
GGCATTTAGGCGGCGCTTAG+TGG - chr7.1:52927815-52927834 None:intergenic 60.0%
GTGACCAAAAGCGGCGGAAG+AGG + chr7.1:52925289-52925308 MS.gene050248:CDS 60.0%
!! GGGAATGGGCTGATGGGCAA+AGG - chr7.1:52924931-52924950 None:intergenic 60.0%
GGCGCTTAGTGGCGTTCCAG+TGG - chr7.1:52927804-52927823 None:intergenic 65.0%
GTTCCCACAGTGGCACCGTG+CGG - chr7.1:52927529-52927548 None:intergenic 65.0%
!! TCTCCGCACGGTGCCACTGT+GGG + chr7.1:52927523-52927542 MS.gene050248:intron 65.0%
!! TTCTCCGCACGGTGCCACTG+TGG + chr7.1:52927522-52927541 MS.gene050248:intron 65.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 52924784 52928194 52924784 ID=MS.gene050248
chr7.1 mRNA 52924784 52928194 52924784 ID=MS.gene050248.t1;Parent=MS.gene050248
chr7.1 exon 52924784 52925385 52924784 ID=MS.gene050248.t1.exon1;Parent=MS.gene050248.t1
chr7.1 CDS 52924784 52925385 52924784 ID=cds.MS.gene050248.t1;Parent=MS.gene050248.t1
chr7.1 exon 52925537 52925663 52925537 ID=MS.gene050248.t1.exon2;Parent=MS.gene050248.t1
chr7.1 CDS 52925537 52925663 52925537 ID=cds.MS.gene050248.t1;Parent=MS.gene050248.t1
chr7.1 exon 52927682 52928194 52927682 ID=MS.gene050248.t1.exon3;Parent=MS.gene050248.t1
chr7.1 CDS 52927682 52928194 52927682 ID=cds.MS.gene050248.t1;Parent=MS.gene050248.t1
Gene Sequence

>MS.gene050248

ATGATGATTCCTTCTCAACTAGGTTCAAATATTTCACCTCCACCATCACATTACACCACATATTTGTACCAAAGTCAGTCCAATCAACTTAAAGAAGATCTTTTGAATGAGGCCAACCATCACTCTAGTTTTTCTGCAATGGTTCCTTTGCCCATCAGCCCATTCCCTCTGATCCCAACCCATCGGTACAAGGCTACTCACACCAATGGGTCTCAGAGAGAATTCATCAGTGCTCAAAATCCAATGGTCTTTACACCAAACCATAATAAGATGGAAGACATACATGGTCGCCTTAACACTAGCAAAGGAATTTGGGATTTGTCTACAAAAAATCTCTTTCAATATGGTGAAACTTCGCAACCTCGGGTAAGTCCCTCTCTATCACCATCACTGGCTTATGATGCACATCGATCTGTGTCAGTTAATCCTGAGCTTCAAGGAGATCTTTCATGCAATGATGGAATTGGAAACAAATCCCGAGAAAATGATCAACAATTCGTGCTCAGTGACCAAAAGCGGCGGAAGAGGATTCAAAATAATAATGAAATTCAACACAAGGATCCCAATCAAATCAAGGGACAATGGACTTCAAATGAGGATCGGTATATCAAATCATTTAAAATTTTGCATTGTCTTTGCTTATTGTTTTAATTTTCAATTTGATTCATCTTACCTTGATTATATTTTTTTTTTATATTTGTTATCAATTCTTTACATATGATAAACAATGAATAATTGTTTTTATTTTTGTAGGGTTCTTGTCCAATTGGTGGATCAATTTGGGCTTAGAAAATGGTCCCGTATTGCTAAGTTTCTGAAAGGCAGAATTGGAAAACAATGCAGAGATAGATGGAATAACCATCTTCGACCAAACATTAAGGTGTCATTCTTTTGAATCATTTCTGGGATTTATTTCTTACACATACACATATAAATAAAATAATATCAACTCTAAGCAATATTGATTCTTGCTTATTTGTTTACCTTAACATATTTGATTTTTACATGTATACGCACAGTTGCATCAAATAAAACGAAAAAGATTATGGATGCATGTAAATAAATGAATCAATGCAAGTAAAATCAATATGTATGTTTATGATTTTATAAAGAAAAGCAGAATTGGTAACTATCATAATAGTTTAATAAACATTTCATTGGATTTAAAATGATTTTTTTGTAATACATCACCACTAGTCTAGTTGTCTATTTTTTATTAATAAGTATTGTAATAGAGATACAATATTCTTATTGTTCCTATCATCAAGAACTAATTTTTTTAAAAGACATTTTTTCAAACTTTTTTGAAAATACTGATGATAAATGTGTTACTTTTTGTAGAGAACAAATGTGATGATGTCTATAGTAGTGCACCTAAGTTTTATCCATAAGTGTTTTTAATTAATATTTGGGGGGATTATTTACCCTTGTTTCTTAGGGATTTTTTTTTTTTTTTTGAGATAGTCACGGACTTCTACTCTTTATTTCCTTAGATCTCTTGCTTTTTTAGTGTTTCTGTTTTTGTACTTTTTCGAGGGTTTTGGTTTGGTCCCTCTTCTTGTACAATTTTTCCATTTTTAAATTTTTTTTAGAGCAAGTGGTATAGGATAGAGGCTGGCAGGGAAGCCTAGTTGCCCCTTGATGCCTTCCTTTGCACTTTAATTCATAAAAAAAATGAATAAGTTTTTTGTTTGAAATCTAGTATTGAGGTAGTTTTTGTTTATAGAAATTTATCTTTACCTATTTTTAATTTTGGTAATTTCGAATAGATGAATTTTACACGAATGATATTTGACTTCTTTTCACGCAACTCCTTTCACATGTGTTTTTGTTTTTAGTCCTACATTGATTATATAAAAATATTCAATGTATTATTTAAGTCACGAGTTTTTTTCACTTAATGGACCAAACTCTCATTTGTTTTTTTAAAACAATGTTATGTTAATTTGTTAGTATTTGATGGAGGTGAAAATTTGAACTCAGACCATTCTTATAACTTTACTCTTTCAGTTGAACCACCAAGTCAACCTTATAACTCCCTTGTATCTCTCATTTGTAAGACTAATGTTTCTTATTTTATACAAAATGACTAAGAATGTTTAAGATATCTCTCTCTTTTGTTTTTCAATTTTTTTTGTCTCATTTGTAAGACTATATAGTAGCATGAAGTTTTGACAACCGTCTTGTGTCTTGATTTTACACTATTCGTTCTATTACCTATATACTTTATCTCTAGTATGTGACTCTTGGTCATGATTTATGTTAATTAAAAACTTATTTTGTTTTGTTTCGTTACCACTTCCTTTAAAAATAATTCATGTGGAATAATTGTGCTCTGTTTCTAATTACATTGCATTGTAAATGATCGATGTTGAACTCTGTGACTCAATTTATTTTTAGAGTGATACTTGTCAAAATTATTCCATTTAATAAGTATTTATGAATATTATCTTTAGTCAATCCAACACTTGAAGTTGAATATCTATATAAGCCACGTAAGCTTATGATCGATACATTACTCGTATTTCAAATAGTTTATCATACATTGGACTGAAGTAAATTGATGATTTCTTTTTTAAACTTTACTAAATTCGTAGGTTTGATATAGTCAATTACTTTGCCAAAATATAACCAATTGTTATTCATACAATTGGTTGATCTCCAATATGCCTATATGTGTTAAATTGGTGTTTGAATTTTCCTGTTGTTAAATTGGTGTTTGAATTTCATCAATTTTGTTCTCCGCACGGTGCCACTGTGGGAACAAATACGTGTTATATTTTGTTAGATAGCTAATTGGAATAAGTCATTACTAAATTGATGAAATGAGAATCTTCCGTACATTAAATATAATTAACCATATATCTAACCCACACATATTGTTATGTATGATTTCAGAAAGATTCGTGGACCGAAGAGGAGGAAAAAAGATTAATCGAAGCTCACAAAATAGTTGGAAACAAGTGGACTGAAATTTCAAGAAGATTGCCAGGGCGCACTGAGAACTCCATCAAGAACCACTGGAACGCCACTAAGCGCCGCCTAAATGCCAAGAGGAAGAACCGAGGTAAGAGTTCAAAGGGGATACTACTTCTAAAATACATAATGGAAGTCATCAATGCTAAGGAAGTTGAAAAGGAGCCGATGACGTATTCTATGAGCATGATGGACATTAGAAATCAACCAAATTTTGAAAGCTCAGAGAATGATTTTAGAACTGAAGGTTTGGCTATTCCAGAGAACGAAATTTGTGGGTTTGTTCCAATGACATTCAATGGTAATGATGGAATGGCAAGTGGATCTGGTACCATGATGAATTATGAGTTTGGATCATATGGAATGGAGTTTTTTCCTGAGGTTCCTCTTAAGCAAGAAATTGATCTCATGGAGATGATCTATAAAAACCCTTAA
Protein sequence

>MS.gene050248.t1

MMIPSQLGSNISPPPSHYTTYLYQSQSNQLKEDLLNEANHHSSFSAMVPLPISPFPLIPTHRYKATHTNGSQREFISAQNPMVFTPNHNKMEDIHGRLNTSKGIWDLSTKNLFQYGETSQPRVSPSLSPSLAYDAHRSVSVNPELQGDLSCNDGIGNKSRENDQQFVLSDQKRRKRIQNNNEIQHKDPNQIKGQWTSNEDRVLVQLVDQFGLRKWSRIAKFLKGRIGKQCRDRWNNHLRPNIKKDSWTEEEEKRLIEAHKIVGNKWTEISRRLPGRTENSIKNHWNATKRRLNAKRKNRGKSSKGILLLKYIMEVINAKEVEKEPMTYSMSMMDIRNQPNFESSENDFRTEGLAIPENEICGFVPMTFNGNDGMASGSGTMMNYEFGSYGMEFFPEVPLKQEIDLMEMIYKNP