Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050583.t1 | XP_024626902.1 | 90.1 | 292 | 25 | 1 | 1 | 292 | 1 | 288 | 2.10E-147 | 532.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050583.t1 | Q9FY93 | 32.0 | 147 | 87 | 6 | 11 | 154 | 20 | 156 | 2.9e-12 | 74.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050583.t1 | G7L2Y2 | 93.5 | 200 | 13 | 0 | 1 | 200 | 1 | 200 | 5.4e-105 | 391.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene050583.t1 | TF | NAC |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050583.t1 | MTR_7g116460 | 93.500 | 200 | 13 | 0 | 1 | 200 | 1 | 200 | 1.09e-137 | 393 |
| MS.gene050583.t1 | MTR_1g045470 | 50.720 | 347 | 91 | 6 | 1 | 297 | 1 | 317 | 6.12e-101 | 304 |
| MS.gene050583.t1 | MTR_1g053575 | 44.315 | 343 | 117 | 8 | 1 | 297 | 1 | 315 | 1.15e-84 | 262 |
| MS.gene050583.t1 | MTR_1g019820 | 48.052 | 231 | 64 | 8 | 95 | 291 | 2 | 210 | 1.42e-48 | 165 |
| MS.gene050583.t1 | MTR_7g100990 | 32.075 | 159 | 89 | 6 | 11 | 159 | 17 | 166 | 1.64e-15 | 77.8 |
| MS.gene050583.t1 | MTR_7g005280 | 31.507 | 146 | 88 | 4 | 11 | 154 | 21 | 156 | 6.84e-15 | 74.7 |
| MS.gene050583.t1 | MTR_2157s0010 | 33.333 | 135 | 78 | 6 | 11 | 141 | 14 | 140 | 1.12e-11 | 65.5 |
| MS.gene050583.t1 | MTR_7g085220 | 31.361 | 169 | 86 | 8 | 11 | 160 | 14 | 171 | 1.88e-11 | 65.5 |
| MS.gene050583.t1 | MTR_8g094580 | 31.414 | 191 | 104 | 10 | 11 | 186 | 13 | 191 | 2.88e-11 | 64.3 |
| MS.gene050583.t1 | MTR_1g090723 | 31.282 | 195 | 100 | 11 | 11 | 192 | 14 | 187 | 3.70e-11 | 65.5 |
| MS.gene050583.t1 | MTR_3g088110 | 30.952 | 168 | 94 | 8 | 11 | 168 | 13 | 168 | 3.98e-11 | 63.9 |
| MS.gene050583.t1 | MTR_1g090723 | 31.282 | 195 | 100 | 11 | 11 | 192 | 14 | 187 | 4.29e-11 | 65.5 |
| MS.gene050583.t1 | MTR_5g041940 | 29.834 | 181 | 106 | 8 | 11 | 180 | 9 | 179 | 4.81e-11 | 63.5 |
| MS.gene050583.t1 | MTR_2g079990 | 34.868 | 152 | 84 | 8 | 11 | 157 | 22 | 163 | 4.98e-11 | 64.3 |
| MS.gene050583.t1 | MTR_1g090723 | 31.122 | 196 | 100 | 11 | 11 | 192 | 14 | 188 | 5.25e-11 | 65.1 |
| MS.gene050583.t1 | MTR_6g477900 | 32.468 | 154 | 90 | 8 | 11 | 158 | 12 | 157 | 6.13e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050583.t1 | AT5G13180 | 31.293 | 147 | 88 | 5 | 11 | 154 | 20 | 156 | 1.17e-14 | 73.9 |
| MS.gene050583.t1 | AT3G15510 | 30.058 | 173 | 97 | 6 | 11 | 167 | 23 | 187 | 1.69e-13 | 72.0 |
| MS.gene050583.t1 | AT2G33480 | 31.507 | 146 | 86 | 4 | 11 | 154 | 21 | 154 | 1.71e-12 | 67.8 |
| MS.gene050583.t1 | AT5G62380 | 30.233 | 172 | 99 | 7 | 11 | 173 | 13 | 172 | 2.16e-12 | 68.6 |
| MS.gene050583.t1 | AT5G62380 | 30.233 | 172 | 99 | 7 | 11 | 173 | 13 | 172 | 2.16e-12 | 68.6 |
| MS.gene050583.t1 | AT3G15500 | 33.728 | 169 | 95 | 8 | 11 | 173 | 20 | 177 | 4.12e-12 | 67.4 |
| MS.gene050583.t1 | AT5G63790 | 32.680 | 153 | 84 | 6 | 11 | 154 | 56 | 198 | 1.09e-11 | 66.2 |
| MS.gene050583.t1 | AT4G27410 | 32.298 | 161 | 94 | 7 | 11 | 166 | 20 | 170 | 1.16e-11 | 65.9 |
| MS.gene050583.t1 | AT5G63790 | 32.680 | 153 | 84 | 6 | 11 | 154 | 66 | 208 | 1.44e-11 | 65.9 |
| MS.gene050583.t1 | AT3G04070 | 33.577 | 137 | 77 | 6 | 11 | 141 | 16 | 144 | 1.45e-11 | 66.2 |
| MS.gene050583.t1 | AT1G77450 | 32.258 | 155 | 80 | 8 | 11 | 154 | 16 | 156 | 1.62e-11 | 64.7 |
| MS.gene050583.t1 | AT3G10480 | 32.468 | 154 | 90 | 9 | 11 | 158 | 33 | 178 | 3.78e-11 | 65.1 |
Find 86 sgRNAs with CRISPR-Local
Find 305 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCATCTTCTTTGTTAAATT+TGG | 0.065345 | 7.3:-1660109 | None:intergenic |
| AGTGGCAGATTTCTTCTTTA+AGG | 0.196237 | 7.3:-1657223 | None:intergenic |
| CAAGTTGATTTCTTGAATTT+TGG | 0.219784 | 7.3:-1660035 | None:intergenic |
| TAAAGAATCCTTGGGAGATT+TGG | 0.238348 | 7.3:+1657145 | MS.gene050583:CDS |
| TAAGACTTTGTTAGTCTCTT+TGG | 0.241064 | 7.3:-1657316 | None:intergenic |
| AGAAAGAAACTGATAACTTT+AGG | 0.252237 | 7.3:+1660941 | MS.gene050583:CDS |
| TCTCGTTCAACATTAATTCT+TGG | 0.268870 | 7.3:-1657824 | None:intergenic |
| ATCATTCACATGTGTTTGTT+TGG | 0.293223 | 7.3:-1661632 | None:intergenic |
| AAAGAGACTAACAAAGTCTT+AGG | 0.324892 | 7.3:+1657318 | MS.gene050583:CDS |
| GCTATTCATTAAGTGAGAAT+TGG | 0.337832 | 7.3:-1657792 | None:intergenic |
| AAACGCTTGATTCGTACTAT+TGG | 0.347420 | 7.3:+1657249 | MS.gene050583:CDS |
| TTGTTAAATTTGGAATCTAT+TGG | 0.349674 | 7.3:-1660099 | None:intergenic |
| ATTCTCGAGTTCGAAAGGTT+GGG | 0.352927 | 7.3:+1661014 | MS.gene050583:CDS |
| AAAGAATCCTTGGGAGATTT+GGG | 0.358697 | 7.3:+1657146 | MS.gene050583:CDS |
| GTTCTTGACTACGAATTGTT+TGG | 0.361023 | 7.3:+1657117 | MS.gene050583:CDS |
| GAAAGAAACTGATAACTTTA+GGG | 0.366426 | 7.3:+1660942 | MS.gene050583:CDS |
| TTCAGGAGAACAATAATGTT+TGG | 0.367234 | 7.3:+1659995 | MS.gene050583:intron |
| TTAAGGTAGTGAAGAAATAT+AGG | 0.389832 | 7.3:-1657206 | None:intergenic |
| TCTGCACAGAACATAGTTCT+TGG | 0.390732 | 7.3:-1657735 | None:intergenic |
| AATTCAAGAAATCAACTTGA+TGG | 0.411296 | 7.3:+1660039 | MS.gene050583:CDS |
| TTCTCGAGTTCGAAAGGTTG+GGG | 0.418223 | 7.3:+1661015 | MS.gene050583:CDS |
| TTGGTATTGTAAAGAATCCT+TGG | 0.419593 | 7.3:+1657136 | MS.gene050583:CDS |
| TTTGTCGCTTTCCGCATGTC+CGG | 0.421882 | 7.3:-1657870 | None:intergenic |
| AAGCTCAGGCCAAGACATAA+TGG | 0.436693 | 7.3:-1660178 | None:intergenic |
| CAAGGAAAGACGGTTGTTCC+CGG | 0.441458 | 7.3:+1657851 | MS.gene050583:CDS |
| GCATGGAGTGGTTGCGAAGG+TGG | 0.450464 | 7.3:+1660982 | MS.gene050583:CDS |
| AAGAATCAAGTTGATGTTGA+CGG | 0.465509 | 7.3:+1661784 | MS.gene050583:CDS |
| GATTCTCGAGTTCGAAAGGT+TGG | 0.469080 | 7.3:+1661013 | MS.gene050583:CDS |
| CATGGAGTGGTTGCGAAGGT+GGG | 0.469238 | 7.3:+1660983 | MS.gene050583:CDS |
| GGAGAACAATAATGTTTGGT+TGG | 0.470777 | 7.3:+1659999 | MS.gene050583:intron |
| TGGTATTGTAAAGAATCCTT+GGG | 0.476614 | 7.3:+1657137 | MS.gene050583:CDS |
| CGGTTAAAGAGGATTACAAT+TGG | 0.483534 | 7.3:+1661074 | MS.gene050583:CDS |
| TTGTCGCTTTCCGCATGTCC+GGG | 0.489350 | 7.3:-1657869 | None:intergenic |
| AGAATTAATGTTGAACGAGA+TGG | 0.489727 | 7.3:+1657827 | MS.gene050583:CDS |
| TCATTAAGTGAGAATTGGAT+TGG | 0.490569 | 7.3:-1657787 | None:intergenic |
| GTCAAGAACAGTGATATAGT+TGG | 0.497277 | 7.3:-1657103 | None:intergenic |
| GTGGTAGGGAGGAGCAGCGG+AGG | 0.499708 | 7.3:+1660918 | MS.gene050583:intron |
| ATGTTTGATTAACAATACTT+TGG | 0.503867 | 7.3:+1657422 | MS.gene050583:CDS |
| GCACCTTCTCACTCATATTG+TGG | 0.509291 | 7.3:+1657177 | MS.gene050583:CDS |
| TCTCACTTAATGAATAGCAT+TGG | 0.510999 | 7.3:+1657797 | MS.gene050583:CDS |
| TCAAGAACAGTGATATAGTT+GGG | 0.517379 | 7.3:-1657102 | None:intergenic |
| GAAGAAGACAAAGAAGAAGA+TGG | 0.524222 | 7.3:+1660150 | MS.gene050583:CDS |
| TGGAGTGGTTGCGAAGGTGG+GGG | 0.525414 | 7.3:+1660985 | MS.gene050583:CDS |
| CAAGTACAACTCGGTTAAAG+AGG | 0.525975 | 7.3:+1661063 | MS.gene050583:CDS |
| ATGGAGTGGTTGCGAAGGTG+GGG | 0.531550 | 7.3:+1660984 | MS.gene050583:CDS |
| GCAAGATCCATGCACCATCA+TGG | 0.532431 | 7.3:-1657380 | None:intergenic |
| AGTTCCTGTGAGAAAAGCTC+AGG | 0.533543 | 7.3:-1660192 | None:intergenic |
| GAATTAATGTTGAACGAGAT+GGG | 0.535978 | 7.3:+1657828 | MS.gene050583:CDS |
| GGGTGTGTTGGTTTCAAACA+AGG | 0.537809 | 7.3:+1661037 | MS.gene050583:CDS |
| TTGATTCGTACTATTGGAAG+TGG | 0.541617 | 7.3:+1657255 | MS.gene050583:CDS |
| CGGATAAGTTCATCATCAGT+AGG | 0.544033 | 7.3:-1657042 | None:intergenic |
| GATTACAATTGGCCACGTAA+TGG | 0.546983 | 7.3:+1661085 | MS.gene050583:CDS |
| TCTCGAGTTCGAAAGGTTGG+GGG | 0.551191 | 7.3:+1661016 | MS.gene050583:CDS |
| AAACATGTGGTGGAGACGCA+TGG | 0.559389 | 7.3:+1660965 | MS.gene050583:CDS |
| ACAGTGATATAGTTGGGCAC+TGG | 0.565126 | 7.3:-1657096 | None:intergenic |
| TGTGGATTCTCGAGTTCGAA+AGG | 0.568233 | 7.3:+1661009 | MS.gene050583:CDS |
| GAACTGAGAGAGAAGAATGA+AGG | 0.573202 | 7.3:+1660210 | MS.gene050583:CDS |
| AACTCTTCCCAAATCTCCCA+AGG | 0.573940 | 7.3:-1657153 | None:intergenic |
| ATGGTGGTGCCATTATGTCT+TGG | 0.580140 | 7.3:+1660169 | MS.gene050583:CDS |
| AAGAGTAACACTTTCCATGA+TGG | 0.580464 | 7.3:+1657366 | MS.gene050583:CDS |
| ACACTTTCCATGATGGTGCA+TGG | 0.590768 | 7.3:+1657373 | MS.gene050583:CDS |
| ATTGGAAGTGGTACGTGGGA+AGG | 0.591301 | 7.3:+1657267 | MS.gene050583:CDS |
| GACGGTTGTTCCCGGACATG+CGG | 0.591474 | 7.3:+1657859 | MS.gene050583:CDS |
| TTTCCACAATATGAGTGAGA+AGG | 0.600309 | 7.3:-1657180 | None:intergenic |
| AATGTTGAACGAGATGGGCA+AGG | 0.603096 | 7.3:+1657833 | MS.gene050583:CDS |
| TCAAGAAATCAACTTGATGG+TGG | 0.603787 | 7.3:+1660042 | MS.gene050583:CDS |
| TGTTAATCAAACATTCAGCA+AGG | 0.609040 | 7.3:-1657413 | None:intergenic |
| GACGCATGGAGTGGTTGCGA+AGG | 0.609579 | 7.3:+1660979 | MS.gene050583:CDS |
| CTCGAGTTCGAAAGGTTGGG+GGG | 0.609899 | 7.3:+1661017 | MS.gene050583:CDS |
| ACGAGATGGGCAAGGAAAGA+CGG | 0.618373 | 7.3:+1657841 | MS.gene050583:CDS |
| TGACAACTTGAATGAAGAGT+GGG | 0.622092 | 7.3:+1661717 | MS.gene050583:CDS |
| AACTTTAGGGAAACATGTGG+TGG | 0.624259 | 7.3:+1660955 | MS.gene050583:CDS |
| ACGAATCAAGCGTTTACTAG+TGG | 0.633781 | 7.3:-1657241 | None:intergenic |
| GTACTATTGGAAGTGGTACG+TGG | 0.636891 | 7.3:+1657262 | MS.gene050583:CDS |
| CTGGTGGTAGGGAGGAGCAG+CGG | 0.638479 | 7.3:+1660915 | MS.gene050583:intron |
| TTGACAACTTGAATGAAGAG+TGG | 0.643883 | 7.3:+1661716 | MS.gene050583:CDS |
| TACTATTGGAAGTGGTACGT+GGG | 0.651315 | 7.3:+1657263 | MS.gene050583:CDS |
| ACAAGGATGCAAGTACAACT+CGG | 0.651864 | 7.3:+1661054 | MS.gene050583:CDS |
| TGCCCAAGAAAAGATTGTGA+AGG | 0.654564 | 7.3:+1661741 | MS.gene050583:CDS |
| GAAGACAAAGAAGAAGATGG+TGG | 0.681475 | 7.3:+1660153 | MS.gene050583:CDS |
| TGGAAATATCAAGACCGATG+TGG | 0.685625 | 7.3:+1660062 | MS.gene050583:CDS |
| ACGTGGGAAGGTGAAGACAC+CGG | 0.689724 | 7.3:+1657279 | MS.gene050583:CDS |
| GATAACTTTAGGGAAACATG+TGG | 0.695454 | 7.3:+1660952 | MS.gene050583:CDS |
| TGTGGTGGAGACGCATGGAG+TGG | 0.724193 | 7.3:+1660970 | MS.gene050583:CDS |
| GTAGCAATCATACCATTACG+TGG | 0.761567 | 7.3:-1661097 | None:intergenic |
| GATGTTCTTAATGAGCAACG+TGG | 0.776257 | 7.3:+1661679 | MS.gene050583:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACAATATAACAAAAAAAAA+CGG | + | chr7.3:1658473-1658492 | MS.gene050583:intron | 10.0% |
| !! | AAAATTATAGTTATAGATGT+TGG | + | chr7.3:1658289-1658308 | MS.gene050583:intron | 15.0% |
| !! | AAAATTGTAGGTATAAATAT+TGG | + | chr7.3:1658314-1658333 | MS.gene050583:intron | 15.0% |
| !! | AGTTCCTTAAAAAAATTATT+GGG | - | chr7.3:1660270-1660289 | None:intergenic | 15.0% |
| !! | ATTTATATTGTTAGTTAGTT+AGG | + | chr7.3:1657460-1657479 | MS.gene050583:intron | 15.0% |
| !! | CATAAAATAAACTTAAACAT+TGG | - | chr7.3:1657589-1657608 | None:intergenic | 15.0% |
| !! | TAATAATAATGAGTAATTAG+AGG | + | chr7.3:1660665-1660684 | MS.gene050583:intron | 15.0% |
| !! | TTGTTAATAGTTAAATAATG+AGG | - | chr7.3:1659417-1659436 | None:intergenic | 15.0% |
| !!! | AATTATCTTATCACTTTTTA+TGG | + | chr7.3:1659560-1659579 | MS.gene050583:intron | 15.0% |
| !!! | ATTTTGCATTCTTTATTTTT+AGG | + | chr7.3:1658996-1659015 | MS.gene050583:intron | 15.0% |
| !!! | CAATGTTTAAGTTTATTTTA+TGG | + | chr7.3:1657587-1657606 | MS.gene050583:intron | 15.0% |
| !!! | CAATTTTTGAATTTCAATTT+TGG | - | chr7.3:1659926-1659945 | None:intergenic | 15.0% |
| !!! | CATCAAAATTTGATTTTTAA+TGG | - | chr7.3:1658963-1658982 | None:intergenic | 15.0% |
| !!! | GAATAAGTTGTTTTAAATTT+TGG | - | chr7.3:1659859-1659878 | None:intergenic | 15.0% |
| !!! | GCTACTATTTTTTTTTTTTA+AGG | + | chr7.3:1657920-1657939 | MS.gene050583:intron | 15.0% |
| !!! | TTTAATTTCTACAAAATCTT+TGG | + | chr7.3:1661474-1661493 | MS.gene050583:intron | 15.0% |
| !!! | TTTTGCATTCTTTATTTTTA+GGG | + | chr7.3:1658997-1659016 | MS.gene050583:intron | 15.0% |
| !! | AATCACAATCTTAACAAATT+AGG | - | chr7.3:1658631-1658650 | None:intergenic | 20.0% |
| !! | ACTTAGAATTTCTTGAAAAT+AGG | - | chr7.3:1658584-1658603 | None:intergenic | 20.0% |
| !! | ATAATAGAGAGAAAAAAGAA+AGG | - | chr7.3:1659334-1659353 | None:intergenic | 20.0% |
| !! | ATCATCTTCTTTGTTAAATT+TGG | - | chr7.3:1660112-1660131 | None:intergenic | 20.0% |
| !! | ATGTTTGATTAACAATACTT+TGG | + | chr7.3:1657422-1657441 | MS.gene050583:CDS | 20.0% |
| !! | CAGTTCCTTAAAAAAATTAT+TGG | - | chr7.3:1660271-1660290 | None:intergenic | 20.0% |
| !! | CTACTTATTTATCTTGAAAA+AGG | - | chr7.3:1658164-1658183 | None:intergenic | 20.0% |
| !! | TACCTGACAAAATAATAAAA+GGG | - | chr7.3:1658122-1658141 | None:intergenic | 20.0% |
| !! | TATTGTTGAATACATTGAAT+AGG | - | chr7.3:1661138-1661157 | None:intergenic | 20.0% |
| !! | TTACATATCGTCTAAAAAAA+AGG | - | chr7.3:1659516-1659535 | None:intergenic | 20.0% |
| !!! | AAATTTGTTTGAAAATGTCA+TGG | + | chr7.3:1661504-1661523 | MS.gene050583:intron | 20.0% |
| !!! | AATGCTATCTATTTTTTAAG+AGG | + | chr7.3:1660472-1660491 | MS.gene050583:intron | 20.0% |
| !!! | ACAAATAATACTTACACTTT+TGG | - | chr7.3:1659193-1659212 | None:intergenic | 20.0% |
| !!! | ATTTAATTTTGTTGAAGACT+GGG | + | chr7.3:1661546-1661565 | MS.gene050583:intron | 20.0% |
| !!! | CTTTTTCAAGATAAATAAGT+AGG | + | chr7.3:1658162-1658181 | MS.gene050583:intron | 20.0% |
| !!! | GAAAACAAATTCTTTGAAAA+GGG | + | chr7.3:1661423-1661442 | MS.gene050583:intron | 20.0% |
| !!! | TAATTTGTTAAGATTGTGAT+TGG | + | chr7.3:1658630-1658649 | MS.gene050583:intron | 20.0% |
| !!! | TATTCGTTTGTTATATGTTA+AGG | + | chr7.3:1657514-1657533 | MS.gene050583:intron | 20.0% |
| !!! | TATTGTGAATTTTATTGTAG+AGG | - | chr7.3:1657074-1657093 | None:intergenic | 20.0% |
| !!! | TCATCTTTTATTTTAGTTCA+AGG | + | chr7.3:1660436-1660455 | MS.gene050583:intron | 20.0% |
| !!! | TGAAAACAAATTCTTTGAAA+AGG | + | chr7.3:1661422-1661441 | MS.gene050583:intron | 20.0% |
| !!! | TTGTTAAATTTGGAATCTAT+TGG | - | chr7.3:1660102-1660121 | None:intergenic | 20.0% |
| !!! | TTTTGCATTTTCATTTTTTC+AGG | + | chr7.3:1659978-1659997 | MS.gene050583:intron | 20.0% |
| ! | AAATGCATTGTTATATACGT+GGG | - | chr7.3:1658211-1658230 | None:intergenic | 25.0% |
| ! | AACAAAAATTAAAACGAGGT+GGG | - | chr7.3:1657557-1657576 | None:intergenic | 25.0% |
| ! | AACATGGATACCAAATATAA+TGG | - | chr7.3:1658811-1658830 | None:intergenic | 25.0% |
| ! | AAGATAAATAAGTAGGTATC+CGG | + | chr7.3:1658169-1658188 | MS.gene050583:intron | 25.0% |
| ! | AATGCAAAAGCTCAATAATA+AGG | - | chr7.3:1659967-1659986 | None:intergenic | 25.0% |
| ! | AATTCAAGAAATCAACTTGA+TGG | + | chr7.3:1660039-1660058 | MS.gene050583:CDS | 25.0% |
| ! | AATTCGACTTCCATTATATT+TGG | + | chr7.3:1658798-1658817 | MS.gene050583:intron | 25.0% |
| ! | AATTTCTACAAAATCTTTGG+AGG | + | chr7.3:1661477-1661496 | MS.gene050583:intron | 25.0% |
| ! | AGAAAGAAACTGATAACTTT+AGG | + | chr7.3:1660941-1660960 | MS.gene050583:CDS | 25.0% |
| ! | ATAAAAAAACGATTTCGCTT+TGG | + | chr7.3:1657342-1657361 | MS.gene050583:CDS | 25.0% |
| ! | ATAAATTTGAGCAAAAGGAT+TGG | - | chr7.3:1658863-1658882 | None:intergenic | 25.0% |
| ! | CTACCTGACAAAATAATAAA+AGG | - | chr7.3:1658123-1658142 | None:intergenic | 25.0% |
| ! | GAAAGAAACTGATAACTTTA+GGG | + | chr7.3:1660942-1660961 | MS.gene050583:CDS | 25.0% |
| ! | GGAGAAAAAATTGTTACAAA+GGG | + | chr7.3:1660815-1660834 | MS.gene050583:intron | 25.0% |
| ! | GTATTCAACAATATGTATTG+TGG | + | chr7.3:1661145-1661164 | MS.gene050583:intron | 25.0% |
| ! | GTTCAACAAAAATTAAAACG+AGG | - | chr7.3:1657561-1657580 | None:intergenic | 25.0% |
| ! | TAAAAAAACGATTTCGCTTT+GGG | + | chr7.3:1657343-1657362 | MS.gene050583:CDS | 25.0% |
| ! | TAAATTTGAGCAAAAGGATT+GGG | - | chr7.3:1658862-1658881 | None:intergenic | 25.0% |
| ! | TAACAAATGAACGTATGTAA+GGG | + | chr7.3:1659431-1659450 | MS.gene050583:intron | 25.0% |
| ! | TAATACATCAACAAAATCTC+TGG | - | chr7.3:1659226-1659245 | None:intergenic | 25.0% |
| ! | TTAACAAATGAACGTATGTA+AGG | + | chr7.3:1659430-1659449 | MS.gene050583:intron | 25.0% |
| ! | TTAAGGTAGTGAAGAAATAT+AGG | - | chr7.3:1657209-1657228 | None:intergenic | 25.0% |
| ! | TTTATTATTAACAGCCAATC+AGG | - | chr7.3:1657961-1657980 | None:intergenic | 25.0% |
| !! | AATAATACTTACACTTTTGG+TGG | - | chr7.3:1659190-1659209 | None:intergenic | 25.0% |
| !! | AATATAATGGAAGTCGAATT+TGG | - | chr7.3:1658798-1658817 | None:intergenic | 25.0% |
| !! | AGCAGTTTTTATAAAAGAAC+TGG | - | chr7.3:1658538-1658557 | None:intergenic | 25.0% |
| !! | ATATAATGGAAGTCGAATTT+GGG | - | chr7.3:1658797-1658816 | None:intergenic | 25.0% |
| !! | TAGATGTTGGTTAAAATTGT+AGG | + | chr7.3:1658302-1658321 | MS.gene050583:intron | 25.0% |
| !! | TTTTAATGGTTGAAAAGAAG+AGG | - | chr7.3:1658949-1658968 | None:intergenic | 25.0% |
| !! | TTTTATTGTAGAGGAATGAT+CGG | - | chr7.3:1657065-1657084 | None:intergenic | 25.0% |
| !! | TTTTTGATCAATAAGAAGAG+AGG | + | chr7.3:1659353-1659372 | MS.gene050583:intron | 25.0% |
| !!! | ATCCCTTTTATTATTTTGTC+AGG | + | chr7.3:1658117-1658136 | MS.gene050583:intron | 25.0% |
| !!! | CAAGTTGATTTCTTGAATTT+TGG | - | chr7.3:1660038-1660057 | None:intergenic | 25.0% |
| !!! | CATTTAATTTTGTTGAAGAC+TGG | + | chr7.3:1661545-1661564 | MS.gene050583:intron | 25.0% |
| !!! | GACTGTTAATTTGTAACAAA+CGG | + | chr7.3:1658375-1658394 | MS.gene050583:intron | 25.0% |
| !!! | GCTTCCCAATAATTTTTTTA+AGG | + | chr7.3:1660263-1660282 | MS.gene050583:CDS | 25.0% |
| !!! | GTTTTTTTCTTTCTTTATGC+AGG | + | chr7.3:1657712-1657731 | MS.gene050583:intron | 25.0% |
| !!! | TAGTTTTTTCTGTTACACTT+TGG | + | chr7.3:1659485-1659504 | MS.gene050583:intron | 25.0% |
| !!! | TCAAATTGACATTTTTTCCT+TGG | + | chr7.3:1657652-1657671 | MS.gene050583:intron | 25.0% |
| !!! | TTTAATTTTGTTGAAGACTG+GGG | + | chr7.3:1661547-1661566 | MS.gene050583:intron | 25.0% |
| !!! | TTTTTTTAAGGAACTGTTGT+TGG | + | chr7.3:1660275-1660294 | MS.gene050583:intron | 25.0% |
| AAAAGAAGAGGAACATTGAA+AGG | - | chr7.3:1658937-1658956 | None:intergenic | 30.0% | |
| AAAGAGACTAACAAAGTCTT+AGG | + | chr7.3:1657318-1657337 | MS.gene050583:CDS | 30.0% | |
| AACAGGGAGAAAAAATTATG+AGG | + | chr7.3:1660869-1660888 | MS.gene050583:intron | 30.0% | |
| AATAGATTATGTTGCCTGAT+TGG | + | chr7.3:1657944-1657963 | MS.gene050583:intron | 30.0% | |
| AATCAAATGGTGAACACAAA+AGG | + | chr7.3:1659064-1659083 | MS.gene050583:intron | 30.0% | |
| AATCCACATTATTATGAGAG+AGG | + | chr7.3:1661315-1661334 | MS.gene050583:intron | 30.0% | |
| AATGCATTGTTATATACGTG+GGG | - | chr7.3:1658210-1658229 | None:intergenic | 30.0% | |
| ACAGGGAGAAAAAATTATGA+GGG | + | chr7.3:1660870-1660889 | MS.gene050583:intron | 30.0% | |
| AGAATTAATGTTGAACGAGA+TGG | + | chr7.3:1657827-1657846 | MS.gene050583:CDS | 30.0% | |
| AGATAAATAAGTAGGTATCC+GGG | + | chr7.3:1658170-1658189 | MS.gene050583:intron | 30.0% | |
| AGGATTGATATAGATGAACA+TGG | - | chr7.3:1658827-1658846 | None:intergenic | 30.0% | |
| AGTGTAACAGAAAAAACTAG+TGG | - | chr7.3:1659484-1659503 | None:intergenic | 30.0% | |
| ATAACAAACGAATACATGCT+CGG | - | chr7.3:1657508-1657527 | None:intergenic | 30.0% | |
| ATAGAGAGAAAAAAGAAAGG+AGG | - | chr7.3:1659331-1659350 | None:intergenic | 30.0% | |
| ATCATTCACATGTGTTTGTT+TGG | - | chr7.3:1661635-1661654 | None:intergenic | 30.0% | |
| ATCCACATTATTATGAGAGA+GGG | + | chr7.3:1661316-1661335 | MS.gene050583:intron | 30.0% | |
| ATGATTGCTACCTTAGTTAA+TGG | + | chr7.3:1661109-1661128 | MS.gene050583:intron | 30.0% | |
| CAACAAAAATTAAAACGAGG+TGG | - | chr7.3:1657558-1657577 | None:intergenic | 30.0% | |
| GAAATGCATTGTTATATACG+TGG | - | chr7.3:1658212-1658231 | None:intergenic | 30.0% | |
| GAACCAAAAAGTCAATCAAA+TGG | + | chr7.3:1659051-1659070 | MS.gene050583:intron | 30.0% | |
| GAATTAATGTTGAACGAGAT+GGG | + | chr7.3:1657828-1657847 | MS.gene050583:CDS | 30.0% | |
| GCTATTCATTAAGTGAGAAT+TGG | - | chr7.3:1657795-1657814 | None:intergenic | 30.0% | |
| GGGAGAAAAAATTGTTACAA+AGG | + | chr7.3:1660814-1660833 | MS.gene050583:intron | 30.0% | |
| GTGTCATAAATTTGAGCAAA+AGG | - | chr7.3:1658868-1658887 | None:intergenic | 30.0% | |
| TCAAGAACAGTGATATAGTT+GGG | - | chr7.3:1657105-1657124 | None:intergenic | 30.0% | |
| TCATTAAGTGAGAATTGGAT+TGG | - | chr7.3:1657790-1657809 | None:intergenic | 30.0% | |
| TCTCACTTAATGAATAGCAT+TGG | + | chr7.3:1657797-1657816 | MS.gene050583:CDS | 30.0% | |
| TCTCGTTCAACATTAATTCT+TGG | - | chr7.3:1657827-1657846 | None:intergenic | 30.0% | |
| TGATTGCTACCTTAGTTAAT+GGG | + | chr7.3:1661110-1661129 | MS.gene050583:intron | 30.0% | |
| TGGTATTGTAAAGAATCCTT+GGG | + | chr7.3:1657137-1657156 | MS.gene050583:CDS | 30.0% | |
| TGGTTCCTAACAAAAAGAAT+CGG | - | chr7.3:1658518-1658537 | None:intergenic | 30.0% | |
| TGTTAATCAAACATTCAGCA+AGG | - | chr7.3:1657416-1657435 | None:intergenic | 30.0% | |
| TTCAGGAGAACAATAATGTT+TGG | + | chr7.3:1659995-1660014 | MS.gene050583:intron | 30.0% | |
| TTGAAAATGTCATGGTTGAT+GGG | + | chr7.3:1661512-1661531 | MS.gene050583:intron | 30.0% | |
| TTGGTATTGTAAAGAATCCT+TGG | + | chr7.3:1657136-1657155 | MS.gene050583:CDS | 30.0% | |
| TTTGAAAATGTCATGGTTGA+TGG | + | chr7.3:1661511-1661530 | MS.gene050583:intron | 30.0% | |
| TTTGGGTAAAAAGTGGAATT+TGG | - | chr7.3:1658780-1658799 | None:intergenic | 30.0% | |
| ! | ACATACTACTATTTTGTCCT+TGG | - | chr7.3:1659654-1659673 | None:intergenic | 30.0% |
| ! | CATACTACTATTTTGTCCTT+GGG | - | chr7.3:1659653-1659672 | None:intergenic | 30.0% |
| ! | CTTTGAAAAGGGATAAACAA+AGG | + | chr7.3:1661434-1661453 | MS.gene050583:intron | 30.0% |
| ! | GATTTTATGCATTCAAGACT+TGG | + | chr7.3:1658014-1658033 | MS.gene050583:intron | 30.0% |
| ! | GTATGTTTTCAATGAAGTGA+AGG | + | chr7.3:1661250-1661269 | MS.gene050583:intron | 30.0% |
| ! | TAAGACTTTGTTAGTCTCTT+TGG | - | chr7.3:1657319-1657338 | None:intergenic | 30.0% |
| ! | TATTTCTATGAGCAGTGATA+AGG | + | chr7.3:1661193-1661212 | MS.gene050583:intron | 30.0% |
| ! | TATTTTGTCAGGTAGTTTAG+TGG | + | chr7.3:1658128-1658147 | MS.gene050583:intron | 30.0% |
| ! | TTAATTTTGTTGAAGACTGG+GGG | + | chr7.3:1661548-1661567 | MS.gene050583:intron | 30.0% |
| ! | TTTGGCAACTATTCTTTTTC+CGG | - | chr7.3:1657301-1657320 | None:intergenic | 30.0% |
| !! | AAGAACCGATTCTTTTTGTT+AGG | + | chr7.3:1658510-1658529 | MS.gene050583:intron | 30.0% |
| !! | AAGAATCAAGTTGATGTTGA+CGG | + | chr7.3:1661784-1661803 | MS.gene050583:CDS | 30.0% |
| !! | AAGGTATTTTTACGTTGTAC+AGG | + | chr7.3:1661212-1661231 | MS.gene050583:intron | 30.0% |
| !! | AATTGTGTTTTTCAGTTAGC+AGG | + | chr7.3:1661393-1661412 | MS.gene050583:intron | 30.0% |
| !! | TCACCATTTGATTGACTTTT+TGG | - | chr7.3:1659057-1659076 | None:intergenic | 30.0% |
| !! | TTTGAGACTTTTAACCACAT+CGG | - | chr7.3:1660079-1660098 | None:intergenic | 30.0% |
| !! | TTTTTCGAAGCTTGTATAAG+TGG | + | chr7.3:1661286-1661305 | MS.gene050583:intron | 30.0% |
| AAAAAATTATGAGGGAGGGA+GGG | + | chr7.3:1660878-1660897 | MS.gene050583:intron | 35.0% | |
| AAAGAATCCTTGGGAGATTT+GGG | + | chr7.3:1657146-1657165 | MS.gene050583:CDS | 35.0% | |
| AAATCCACCAAAAGAATTGC+AGG | - | chr7.3:1658096-1658115 | None:intergenic | 35.0% | |
| AAGAGTAACACTTTCCATGA+TGG | + | chr7.3:1657366-1657385 | MS.gene050583:CDS | 35.0% | |
| AATCCACCAAAAGAATTGCA+GGG | - | chr7.3:1658095-1658114 | None:intergenic | 35.0% | |
| AGATGACATTTAACCATGCT+AGG | - | chr7.3:1660422-1660441 | None:intergenic | 35.0% | |
| AGTCGAATTTGGGTAAAAAG+TGG | - | chr7.3:1658787-1658806 | None:intergenic | 35.0% | |
| AGTGGCAGATTTCTTCTTTA+AGG | - | chr7.3:1657226-1657245 | None:intergenic | 35.0% | |
| ATGCATTGTTATATACGTGG+GGG | - | chr7.3:1658209-1658228 | None:intergenic | 35.0% | |
| CGGTTAAAGAGGATTACAAT+TGG | + | chr7.3:1661074-1661093 | MS.gene050583:CDS | 35.0% | |
| CTTGACACAGTAGAAATCAA+TGG | + | chr7.3:1658887-1658906 | MS.gene050583:intron | 35.0% | |
| GAAAAAAGAGATGAGCATGT+GGG | + | chr7.3:1659120-1659139 | MS.gene050583:intron | 35.0% | |
| GAAGAAGACAAAGAAGAAGA+TGG | + | chr7.3:1660150-1660169 | MS.gene050583:CDS | 35.0% | |
| GATAAATAAGTAGGTATCCG+GGG | + | chr7.3:1658171-1658190 | MS.gene050583:intron | 35.0% | |
| GATTGCTACCTTAGTTAATG+GGG | + | chr7.3:1661111-1661130 | MS.gene050583:intron | 35.0% | |
| GGAGAAAAAATTATGAGGGA+GGG | + | chr7.3:1660874-1660893 | MS.gene050583:intron | 35.0% | |
| GGAGAACAATAATGTTTGGT+TGG | + | chr7.3:1659999-1660018 | MS.gene050583:intron | 35.0% | |
| GTCAAGAACAGTGATATAGT+TGG | - | chr7.3:1657106-1657125 | None:intergenic | 35.0% | |
| GTGTGTGTGTGTGATAATTA+GGG | + | chr7.3:1657992-1658011 | MS.gene050583:intron | 35.0% | |
| GTTCTTGACTACGAATTGTT+TGG | + | chr7.3:1657117-1657136 | MS.gene050583:CDS | 35.0% | |
| GTTCTTGGAGAAAATCTGTT+GGG | + | chr7.3:1660839-1660858 | MS.gene050583:intron | 35.0% | |
| TAAACATGTGCACAATACCA+AGG | - | chr7.3:1657672-1657691 | None:intergenic | 35.0% | |
| TAAAGAATCCTTGGGAGATT+TGG | + | chr7.3:1657145-1657164 | MS.gene050583:CDS | 35.0% | |
| TCAAGAAATCAACTTGATGG+TGG | + | chr7.3:1660042-1660061 | MS.gene050583:CDS | 35.0% | |
| TCCACATTATTATGAGAGAG+GGG | + | chr7.3:1661317-1661336 | MS.gene050583:intron | 35.0% | |
| TCTATATCAATCCTTTCCTC+CGG | + | chr7.3:1658833-1658852 | MS.gene050583:intron | 35.0% | |
| TGACAACTTGAATGAAGAGT+GGG | + | chr7.3:1661717-1661736 | MS.gene050583:CDS | 35.0% | |
| TGTGTGTGTGTGTGATAATT+AGG | + | chr7.3:1657991-1658010 | MS.gene050583:intron | 35.0% | |
| TGTTCTTGGAGAAAATCTGT+TGG | + | chr7.3:1660838-1660857 | MS.gene050583:intron | 35.0% | |
| TTGACAACTTGAATGAAGAG+TGG | + | chr7.3:1661716-1661735 | MS.gene050583:CDS | 35.0% | |
| TTTCCACAATATGAGTGAGA+AGG | - | chr7.3:1657183-1657202 | None:intergenic | 35.0% | |
| ! | AAACGCTTGATTCGTACTAT+TGG | + | chr7.3:1657249-1657268 | MS.gene050583:CDS | 35.0% |
| ! | CTCCTTCACAATCTTTTCTT+GGG | - | chr7.3:1661746-1661765 | None:intergenic | 35.0% |
| ! | GATAACTTTAGGGAAACATG+TGG | + | chr7.3:1660952-1660971 | MS.gene050583:CDS | 35.0% |
| ! | TCTCCTTCACAATCTTTTCT+TGG | - | chr7.3:1661747-1661766 | None:intergenic | 35.0% |
| ! | TTGATTCGTACTATTGGAAG+TGG | + | chr7.3:1657255-1657274 | MS.gene050583:CDS | 35.0% |
| !! | ATTGTTACAAAGGGTGTTCT+TGG | + | chr7.3:1660824-1660843 | MS.gene050583:intron | 35.0% |
| !!! | ACTTGCTTTGAGAGTTTTGA+AGG | + | chr7.3:1660724-1660743 | MS.gene050583:intron | 35.0% |
| !!! | TCTCTTTTTTCCTTGCATTG+AGG | - | chr7.3:1659111-1659130 | None:intergenic | 35.0% |
| AAACGCATATGAGAAGGAGA+CGG | + | chr7.3:1660750-1660769 | MS.gene050583:intron | 40.0% | |
| AACCATGCTAGGAAGGAAAA+TGG | - | chr7.3:1660411-1660430 | None:intergenic | 40.0% | |
| AATAGTGTGTACTTTGCCCA+AGG | + | chr7.3:1659634-1659653 | MS.gene050583:intron | 40.0% | |
| ACAAGGATGCAAGTACAACT+CGG | + | chr7.3:1661054-1661073 | MS.gene050583:CDS | 40.0% | |
| ACGAATCAAGCGTTTACTAG+TGG | - | chr7.3:1657244-1657263 | None:intergenic | 40.0% | |
| AGAAGAGGAACATTGAAAGG+TGG | - | chr7.3:1658934-1658953 | None:intergenic | 40.0% | |
| AGGTTCAAACGCATATGAGA+AGG | + | chr7.3:1660744-1660763 | MS.gene050583:intron | 40.0% | |
| ATTATTATGAGAGAGGGGCT+TGG | + | chr7.3:1661322-1661341 | MS.gene050583:intron | 40.0% | |
| ATTCTCGAGTTCGAAAGGTT+GGG | + | chr7.3:1661014-1661033 | MS.gene050583:CDS | 40.0% | |
| ATTGTTATATACGTGGGGGT+TGG | - | chr7.3:1658205-1658224 | None:intergenic | 40.0% | |
| CAAGTACAACTCGGTTAAAG+AGG | + | chr7.3:1661063-1661082 | MS.gene050583:CDS | 40.0% | |
| CGGATAAGTTCATCATCAGT+AGG | - | chr7.3:1657045-1657064 | None:intergenic | 40.0% | |
| GAAAAAATTATGAGGGAGGG+AGG | + | chr7.3:1660877-1660896 | MS.gene050583:intron | 40.0% | |
| GAACTGAGAGAGAAGAATGA+AGG | + | chr7.3:1660210-1660229 | MS.gene050583:CDS | 40.0% | |
| GAAGACAAAGAAGAAGATGG+TGG | + | chr7.3:1660153-1660172 | MS.gene050583:CDS | 40.0% | |
| GAATAGGTCCCCATTAACTA+AGG | - | chr7.3:1661122-1661141 | None:intergenic | 40.0% | |
| GACATTTAACCATGCTAGGA+AGG | - | chr7.3:1660418-1660437 | None:intergenic | 40.0% | |
| GATGTTCTTAATGAGCAACG+TGG | + | chr7.3:1661679-1661698 | MS.gene050583:CDS | 40.0% | |
| GATTACAATTGGCCACGTAA+TGG | + | chr7.3:1661085-1661104 | MS.gene050583:CDS | 40.0% | |
| GGAAAAAAGAGATGAGCATG+TGG | + | chr7.3:1659119-1659138 | MS.gene050583:intron | 40.0% | |
| GGGAGAAAAAATTATGAGGG+AGG | + | chr7.3:1660873-1660892 | MS.gene050583:intron | 40.0% | |
| GTAGCAATCATACCATTACG+TGG | - | chr7.3:1661100-1661119 | None:intergenic | 40.0% | |
| TAATTCAGAGCCTCAATGCA+AGG | + | chr7.3:1659098-1659117 | MS.gene050583:intron | 40.0% | |
| TACTATTGGAAGTGGTACGT+GGG | + | chr7.3:1657263-1657282 | MS.gene050583:CDS | 40.0% | |
| TATTGCGTACTGTGCATGTT+TGG | + | chr7.3:1661354-1661373 | MS.gene050583:intron | 40.0% | |
| TCTGCACAGAACATAGTTCT+TGG | - | chr7.3:1657738-1657757 | None:intergenic | 40.0% | |
| TGAACACAAAAGGAGAAAGG+TGG | + | chr7.3:1659074-1659093 | MS.gene050583:intron | 40.0% | |
| TGCCCAAGAAAAGATTGTGA+AGG | + | chr7.3:1661741-1661760 | MS.gene050583:CDS | 40.0% | |
| TGGAAATATCAAGACCGATG+TGG | + | chr7.3:1660062-1660081 | MS.gene050583:CDS | 40.0% | |
| TGGTGAACACAAAAGGAGAA+AGG | + | chr7.3:1659071-1659090 | MS.gene050583:intron | 40.0% | |
| TTGTTATATACGTGGGGGTT+GGG | - | chr7.3:1658204-1658223 | None:intergenic | 40.0% | |
| ! | AACTTTAGGGAAACATGTGG+TGG | + | chr7.3:1660955-1660974 | MS.gene050583:CDS | 40.0% |
| ! | AGTAGTATTTTTCCGGGTGT+GGG | + | chr7.3:1660693-1660712 | MS.gene050583:intron | 40.0% |
| ! | ATCCATTTTCCTTCCTAGCA+TGG | + | chr7.3:1660406-1660425 | MS.gene050583:intron | 40.0% |
| ! | GCATGCAGTAGTATTTTTCC+GGG | + | chr7.3:1660687-1660706 | MS.gene050583:intron | 40.0% |
| ! | GGCATGCAGTAGTATTTTTC+CGG | + | chr7.3:1660686-1660705 | MS.gene050583:intron | 40.0% |
| !! | AAATGTCATGGTTGATGGGA+AGG | + | chr7.3:1661516-1661535 | MS.gene050583:intron | 40.0% |
| AACTCTTCCCAAATCTCCCA+AGG | - | chr7.3:1657156-1657175 | None:intergenic | 45.0% | |
| AAGCTCAGGCCAAGACATAA+TGG | - | chr7.3:1660181-1660200 | None:intergenic | 45.0% | |
| AATGTTGAACGAGATGGGCA+AGG | + | chr7.3:1657833-1657852 | MS.gene050583:CDS | 45.0% | |
| ACAGTGATATAGTTGGGCAC+TGG | - | chr7.3:1657099-1657118 | None:intergenic | 45.0% | |
| ACATGCAGTGCTACGAACTT+AGG | - | chr7.3:1657633-1657652 | None:intergenic | 45.0% | |
| AGAGGGTGATTGACGTGAAT+GGG | + | chr7.3:1660782-1660801 | MS.gene050583:intron | 45.0% | |
| AGTTCCTGTGAGAAAAGCTC+AGG | - | chr7.3:1660195-1660214 | None:intergenic | 45.0% | |
| ATCTGTTGGGACAGTGTAAC+AGG | + | chr7.3:1660852-1660871 | MS.gene050583:intron | 45.0% | |
| ATGAGAAGGAGACGGAAGTT+GGG | + | chr7.3:1660758-1660777 | MS.gene050583:intron | 45.0% | |
| CAAACGAATACATGCTCGGA+TGG | - | chr7.3:1657504-1657523 | None:intergenic | 45.0% | |
| CCAAAAGAGACCATCCTTCT+AGG | + | chr7.3:1659153-1659172 | MS.gene050583:intron | 45.0% | |
| CCTGCTAACTGAGTTATGCT+CGG | + | chr7.3:1658232-1658251 | MS.gene050583:intron | 45.0% | |
| CGAGCATAACTCAGTTAGCA+GGG | - | chr7.3:1658234-1658253 | None:intergenic | 45.0% | |
| GAGCAAAAGGATTGGGAAAC+CGG | - | chr7.3:1658855-1658874 | None:intergenic | 45.0% | |
| GAGGGATTGAGGTTTGATAC+TGG | + | chr7.3:1660896-1660915 | MS.gene050583:intron | 45.0% | |
| GAGGTTTGATACTGGTGGTA+GGG | + | chr7.3:1660904-1660923 | MS.gene050583:intron | 45.0% | |
| GATTCTCGAGTTCGAAAGGT+TGG | + | chr7.3:1661013-1661032 | MS.gene050583:CDS | 45.0% | |
| GCACCTTCTCACTCATATTG+TGG | + | chr7.3:1657177-1657196 | MS.gene050583:CDS | 45.0% | |
| GCCCCTCTCTCATAATAATG+TGG | - | chr7.3:1661321-1661340 | None:intergenic | 45.0% | |
| GGATTGAGGTTTGATACTGG+TGG | + | chr7.3:1660899-1660918 | MS.gene050583:intron | 45.0% | |
| GTACTATTGGAAGTGGTACG+TGG | + | chr7.3:1657262-1657281 | MS.gene050583:CDS | 45.0% | |
| GTTGATGTTGACGGTAAGTG+AGG | + | chr7.3:1661793-1661812 | MS.gene050583:CDS | 45.0% | |
| TATGAGAAGGAGACGGAAGT+TGG | + | chr7.3:1660757-1660776 | MS.gene050583:intron | 45.0% | |
| TCTGTTGGGACAGTGTAACA+GGG | + | chr7.3:1660853-1660872 | MS.gene050583:intron | 45.0% | |
| TGAGGTTTGATACTGGTGGT+AGG | + | chr7.3:1660903-1660922 | MS.gene050583:intron | 45.0% | |
| TGTGGATTCTCGAGTTCGAA+AGG | + | chr7.3:1661009-1661028 | MS.gene050583:CDS | 45.0% | |
| TGTTATATACGTGGGGGTTG+GGG | - | chr7.3:1658203-1658222 | None:intergenic | 45.0% | |
| TTCTCGAGTTCGAAAGGTTG+GGG | + | chr7.3:1661015-1661034 | MS.gene050583:CDS | 45.0% | |
| TTTGTTGAAGACTGGGGGTT+GGG | + | chr7.3:1661553-1661572 | MS.gene050583:intron | 45.0% | |
| ! | ACACTTTCCATGATGGTGCA+TGG | + | chr7.3:1657373-1657392 | MS.gene050583:CDS | 45.0% |
| ! | CAGTAGTATTTTTCCGGGTG+TGG | + | chr7.3:1660692-1660711 | MS.gene050583:intron | 45.0% |
| ! | CCTAGAAGGATGGTCTCTTT+TGG | - | chr7.3:1659156-1659175 | None:intergenic | 45.0% |
| ! | TTTTGTTGAAGACTGGGGGT+TGG | + | chr7.3:1661552-1661571 | MS.gene050583:intron | 45.0% |
| !! | ACACTTTTGGTGGTAGCTTC+AGG | - | chr7.3:1659180-1659199 | None:intergenic | 45.0% |
| !! | ATGGTGGTGCCATTATGTCT+TGG | + | chr7.3:1660169-1660188 | MS.gene050583:CDS | 45.0% |
| !! | GGGTGTGTTGGTTTCAAACA+AGG | + | chr7.3:1661037-1661056 | MS.gene050583:CDS | 45.0% |
| !! | CTATATAATATATAAATATA+TGG | + | chr7.3:1660337-1660356 | MS.gene050583:intron | 5.0% |
| !!! | CTATAATTTTAATAAATTTA+CGG | - | chr7.3:1658279-1658298 | None:intergenic | 5.0% |
| !!! | TATAATTTTAATAAATTTAC+GGG | - | chr7.3:1658278-1658297 | None:intergenic | 5.0% |
| AAAAGAATTGCAGGGAGCCC+TGG | - | chr7.3:1658087-1658106 | None:intergenic | 50.0% | |
| AAAGAATTGCAGGGAGCCCT+GGG | - | chr7.3:1658086-1658105 | None:intergenic | 50.0% | |
| AAGTAACTCTTGCCCACACC+CGG | - | chr7.3:1660708-1660727 | None:intergenic | 50.0% | |
| ACGAGATGGGCAAGGAAAGA+CGG | + | chr7.3:1657841-1657860 | MS.gene050583:CDS | 50.0% | |
| ACGTGAATGGGGAGCAAAGA+GGG | + | chr7.3:1660794-1660813 | MS.gene050583:intron | 50.0% | |
| AGCTTCAGGTCCTAGAAGGA+TGG | - | chr7.3:1659166-1659185 | None:intergenic | 50.0% | |
| ATTGGAAGTGGTACGTGGGA+AGG | + | chr7.3:1657267-1657286 | MS.gene050583:CDS | 50.0% | |
| CAAAAGGATTGGGAAACCGG+AGG | - | chr7.3:1658852-1658871 | None:intergenic | 50.0% | |
| CAAGGAAAGACGGTTGTTCC+CGG | + | chr7.3:1657851-1657870 | MS.gene050583:CDS | 50.0% | |
| CCGAGCATAACTCAGTTAGC+AGG | - | chr7.3:1658235-1658254 | None:intergenic | 50.0% | |
| GAGAGGGTGATTGACGTGAA+TGG | + | chr7.3:1660781-1660800 | MS.gene050583:intron | 50.0% | |
| GAGGGTGATTGACGTGAATG+GGG | + | chr7.3:1660783-1660802 | MS.gene050583:intron | 50.0% | |
| GCAAGATCCATGCACCATCA+TGG | - | chr7.3:1657383-1657402 | None:intergenic | 50.0% | |
| GTTTGATACTGGTGGTAGGG+AGG | + | chr7.3:1660907-1660926 | MS.gene050583:intron | 50.0% | |
| TCTCGAGTTCGAAAGGTTGG+GGG | + | chr7.3:1661016-1661035 | MS.gene050583:CDS | 50.0% | |
| TGAGAAGGAGACGGAAGTTG+GGG | + | chr7.3:1660759-1660778 | MS.gene050583:intron | 50.0% | |
| TGGTAGCTTCAGGTCCTAGA+AGG | - | chr7.3:1659170-1659189 | None:intergenic | 50.0% | |
| ! | AAACATGTGGTGGAGACGCA+TGG | + | chr7.3:1660965-1660984 | MS.gene050583:CDS | 50.0% |
| ! | AGGGCTCCCTGCAATTCTTT+TGG | + | chr7.3:1658086-1658105 | MS.gene050583:intron | 50.0% |
| ! | GCTCCCTGCAATTCTTTTGG+TGG | + | chr7.3:1658089-1658108 | MS.gene050583:intron | 50.0% |
| ! | TTGGCCTGAGCTTTTCTCAC+AGG | + | chr7.3:1660188-1660207 | MS.gene050583:CDS | 50.0% |
| !! | TTTGTCGCTTTCCGCATGTC+CGG | - | chr7.3:1657873-1657892 | None:intergenic | 50.0% |
| ACGTGGGAAGGTGAAGACAC+CGG | + | chr7.3:1657279-1657298 | MS.gene050583:CDS | 55.0% | |
| CTCGAGTTCGAAAGGTTGGG+GGG | + | chr7.3:1661017-1661036 | MS.gene050583:CDS | 55.0% | |
| GACGTGAATGGGGAGCAAAG+AGG | + | chr7.3:1660793-1660812 | MS.gene050583:intron | 55.0% | |
| GGATTGGGAAACCGGAGGAA+AGG | - | chr7.3:1658847-1658866 | None:intergenic | 55.0% | |
| GGGACGGGACAAATAAGACG+GGG | - | chr7.3:1658053-1658072 | None:intergenic | 55.0% | |
| GGGGACGGGACAAATAAGAC+GGG | - | chr7.3:1658054-1658073 | None:intergenic | 55.0% | |
| GGGGGACGGGACAAATAAGA+CGG | - | chr7.3:1658055-1658074 | None:intergenic | 55.0% | |
| TATGAGGGAGGGAGGGATTG+AGG | + | chr7.3:1660885-1660904 | MS.gene050583:intron | 55.0% | |
| !! | TTGTCGCTTTCCGCATGTCC+GGG | - | chr7.3:1657872-1657891 | None:intergenic | 55.0% |
| AATTGCAGGGAGCCCTGGGT+GGG | - | chr7.3:1658082-1658101 | None:intergenic | 60.0% | |
| AGGAGACGGAAGTTGGGGAG+AGG | + | chr7.3:1660764-1660783 | MS.gene050583:intron | 60.0% | |
| GAAGACTGGGGGTTGGGTCT+TGG | + | chr7.3:1661559-1661578 | MS.gene050583:intron | 60.0% | |
| GACGCATGGAGTGGTTGCGA+AGG | + | chr7.3:1660979-1660998 | MS.gene050583:CDS | 60.0% | |
| GACGGTTGTTCCCGGACATG+CGG | + | chr7.3:1657859-1657878 | MS.gene050583:CDS | 60.0% | |
| GCATGGAGTGGTTGCGAAGG+TGG | + | chr7.3:1660982-1661001 | MS.gene050583:CDS | 60.0% | |
| GGAGACGGAAGTTGGGGAGA+GGG | + | chr7.3:1660765-1660784 | MS.gene050583:intron | 60.0% | |
| ! | CGAAAGGTTGGGGGGTGTGT+TGG | + | chr7.3:1661025-1661044 | MS.gene050583:CDS | 60.0% |
| ! | TGTGGTGGAGACGCATGGAG+TGG | + | chr7.3:1660970-1660989 | MS.gene050583:CDS | 60.0% |
| ATTGCAGGGAGCCCTGGGTG+GGG | - | chr7.3:1658081-1658100 | None:intergenic | 65.0% | |
| CTGGTGGTAGGGAGGAGCAG+CGG | + | chr7.3:1660915-1660934 | MS.gene050583:intron | 65.0% | |
| GAATTGCAGGGAGCCCTGGG+TGG | - | chr7.3:1658083-1658102 | None:intergenic | 65.0% | |
| GGGGGTTGGGGTTCGAACCC+CGG | - | chr7.3:1658191-1658210 | None:intergenic | 70.0% | |
| GTGGTAGGGAGGAGCAGCGG+AGG | + | chr7.3:1660918-1660937 | MS.gene050583:intron | 70.0% | |
| TTGCAGGGAGCCCTGGGTGG+GGG | - | chr7.3:1658080-1658099 | None:intergenic | 70.0% | |
| TGCAGGGAGCCCTGGGTGGG+GGG | - | chr7.3:1658079-1658098 | None:intergenic | 75.0% | |
| ! | AGGGAGCCCTGGGTGGGGGG+TGG | - | chr7.3:1658076-1658095 | None:intergenic | 80.0% |
| ! | CCTGGGTGGGGGGTGGGGGA+CGG | - | chr7.3:1658069-1658088 | None:intergenic | 80.0% |
| ! | CGTCCCCCACCCCCCACCCA+GGG | + | chr7.3:1658067-1658086 | MS.gene050583:intron | 80.0% |
| ! | CTGGGTGGGGGGTGGGGGAC+GGG | - | chr7.3:1658068-1658087 | None:intergenic | 80.0% |
| ! | GAGCCCTGGGTGGGGGGTGG+GGG | - | chr7.3:1658073-1658092 | None:intergenic | 80.0% |
| ! | GGAGCCCTGGGTGGGGGGTG+GGG | - | chr7.3:1658074-1658093 | None:intergenic | 80.0% |
| ! | GGGAGCCCTGGGTGGGGGGT+GGG | - | chr7.3:1658075-1658094 | None:intergenic | 80.0% |
| ! | CCGTCCCCCACCCCCCACCC+AGG | + | chr7.3:1658066-1658085 | MS.gene050583:intron | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 1657006 | 1661813 | 1657006 | ID=MS.gene050583 |
| chr7.3 | mRNA | 1657006 | 1661813 | 1657006 | ID=MS.gene050583.t1;Parent=MS.gene050583 |
| chr7.3 | exon | 1657006 | 1657443 | 1657006 | ID=MS.gene050583.t1.exon1;Parent=MS.gene050583.t1 |
| chr7.3 | CDS | 1657006 | 1657443 | 1657006 | ID=cds.MS.gene050583.t1;Parent=MS.gene050583.t1 |
| chr7.3 | exon | 1657734 | 1657895 | 1657734 | ID=MS.gene050583.t1.exon2;Parent=MS.gene050583.t1 |
| chr7.3 | CDS | 1657734 | 1657895 | 1657734 | ID=cds.MS.gene050583.t1;Parent=MS.gene050583.t1 |
| chr7.3 | exon | 1660000 | 1660289 | 1660000 | ID=MS.gene050583.t1.exon3;Parent=MS.gene050583.t1 |
| chr7.3 | CDS | 1660000 | 1660289 | 1660000 | ID=cds.MS.gene050583.t1;Parent=MS.gene050583.t1 |
| chr7.3 | exon | 1660925 | 1661106 | 1660925 | ID=MS.gene050583.t1.exon4;Parent=MS.gene050583.t1 |
| chr7.3 | CDS | 1660925 | 1661106 | 1660925 | ID=cds.MS.gene050583.t1;Parent=MS.gene050583.t1 |
| chr7.3 | exon | 1661563 | 1661813 | 1661563 | ID=MS.gene050583.t1.exon5;Parent=MS.gene050583.t1 |
| chr7.3 | CDS | 1661563 | 1661813 | 1661563 | ID=cds.MS.gene050583.t1;Parent=MS.gene050583.t1 |
| Gene Sequence |
| Protein sequence |
