Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050705.t1 | XP_013450620.1 | 93.5 | 356 | 8 | 4 | 111 | 464 | 115 | 457 | 1.50E-103 | 386.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050705.t1 | Q7F9W2 | 86.2 | 109 | 15 | 0 | 111 | 219 | 107 | 215 | 3.6e-50 | 200.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050705.t1 | A0A072U667 | 93.5 | 356 | 8 | 4 | 111 | 464 | 115 | 457 | 1.1e-103 | 386.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene050705.t1 | TF | B3 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050705.t1 | MTR_7g117455 | 79.089 | 483 | 56 | 13 | 1 | 464 | 1 | 457 | 0.0 | 603 |
MS.gene050705.t1 | MTR_8g023990 | 43.925 | 428 | 165 | 16 | 58 | 456 | 127 | 508 | 4.63e-89 | 281 |
MS.gene050705.t1 | MTR_1g058350 | 64.179 | 134 | 41 | 3 | 91 | 219 | 50 | 181 | 7.84e-49 | 170 |
MS.gene050705.t1 | MTR_7g105370 | 74.257 | 101 | 23 | 2 | 118 | 218 | 65 | 162 | 2.18e-45 | 160 |
MS.gene050705.t1 | MTR_5g053920 | 65.812 | 117 | 30 | 2 | 110 | 218 | 191 | 305 | 5.50e-45 | 161 |
MS.gene050705.t1 | MTR_1g093600 | 61.789 | 123 | 32 | 2 | 110 | 219 | 188 | 308 | 1.95e-42 | 154 |
MS.gene050705.t1 | MTR_1g116920 | 47.107 | 121 | 52 | 2 | 81 | 201 | 138 | 246 | 1.16e-28 | 115 |
MS.gene050705.t1 | MTR_2g014770 | 39.091 | 110 | 66 | 1 | 94 | 202 | 138 | 247 | 2.61e-14 | 75.9 |
MS.gene050705.t1 | MTR_2g014770 | 39.091 | 110 | 66 | 1 | 94 | 202 | 138 | 247 | 3.65e-14 | 75.1 |
MS.gene050705.t1 | MTR_4g028130 | 40.659 | 91 | 49 | 3 | 113 | 201 | 314 | 401 | 3.69e-14 | 75.5 |
MS.gene050705.t1 | MTR_4g028130 | 40.659 | 91 | 49 | 3 | 113 | 201 | 314 | 401 | 4.06e-14 | 75.5 |
MS.gene050705.t1 | MTR_5g075410 | 38.462 | 91 | 51 | 3 | 113 | 201 | 321 | 408 | 6.39e-14 | 74.7 |
MS.gene050705.t1 | MTR_4g028130 | 39.560 | 91 | 50 | 3 | 113 | 201 | 314 | 401 | 7.46e-14 | 74.3 |
MS.gene050705.t1 | MTR_2g011940 | 38.679 | 106 | 57 | 4 | 113 | 216 | 343 | 442 | 1.89e-13 | 73.2 |
MS.gene050705.t1 | MTR_3g467380 | 40.659 | 91 | 49 | 3 | 113 | 201 | 338 | 425 | 1.97e-13 | 73.2 |
MS.gene050705.t1 | MTR_2g011940 | 37.736 | 106 | 58 | 4 | 113 | 216 | 352 | 451 | 3.02e-13 | 72.4 |
MS.gene050705.t1 | MTR_7g073240 | 40.659 | 91 | 49 | 3 | 113 | 201 | 121 | 208 | 3.41e-13 | 71.2 |
MS.gene050705.t1 | MTR_2g011940 | 38.679 | 106 | 57 | 4 | 113 | 216 | 352 | 451 | 3.48e-13 | 72.0 |
MS.gene050705.t1 | MTR_4g088210 | 40.217 | 92 | 54 | 1 | 112 | 202 | 146 | 237 | 2.26e-12 | 69.7 |
MS.gene050705.t1 | MTR_4g088210 | 40.217 | 92 | 54 | 1 | 112 | 202 | 146 | 237 | 2.55e-12 | 69.7 |
MS.gene050705.t1 | MTR_8g106540 | 71.429 | 42 | 10 | 1 | 382 | 423 | 118 | 157 | 2.33e-11 | 65.1 |
MS.gene050705.t1 | MTR_4g060460 | 36.111 | 108 | 68 | 1 | 112 | 218 | 164 | 271 | 4.71e-11 | 65.5 |
MS.gene050705.t1 | MTR_4g060460 | 36.111 | 108 | 68 | 1 | 112 | 218 | 164 | 271 | 5.17e-11 | 65.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050705.t1 | AT2G46870 | 43.953 | 339 | 82 | 13 | 90 | 412 | 6 | 252 | 8.30e-68 | 219 |
MS.gene050705.t1 | AT1G01030 | 76.562 | 128 | 29 | 1 | 109 | 235 | 51 | 178 | 2.71e-63 | 208 |
MS.gene050705.t1 | AT1G01030 | 80.165 | 121 | 23 | 1 | 109 | 228 | 51 | 171 | 1.16e-61 | 205 |
MS.gene050705.t1 | AT3G61970 | 63.871 | 155 | 49 | 3 | 95 | 244 | 4 | 156 | 1.37e-59 | 197 |
MS.gene050705.t1 | AT4G01500 | 41.562 | 320 | 94 | 12 | 110 | 413 | 32 | 274 | 1.62e-58 | 196 |
MS.gene050705.t1 | AT3G11580 | 63.200 | 125 | 33 | 2 | 105 | 218 | 20 | 142 | 2.23e-49 | 169 |
MS.gene050705.t1 | AT3G11580 | 63.200 | 125 | 33 | 2 | 105 | 218 | 20 | 142 | 2.23e-49 | 169 |
MS.gene050705.t1 | AT3G11580 | 63.200 | 125 | 33 | 2 | 105 | 218 | 20 | 142 | 2.23e-49 | 169 |
MS.gene050705.t1 | AT3G11580 | 62.698 | 126 | 34 | 2 | 105 | 219 | 20 | 143 | 6.02e-49 | 169 |
MS.gene050705.t1 | AT3G11580 | 63.200 | 125 | 33 | 2 | 105 | 218 | 20 | 142 | 8.26e-48 | 169 |
MS.gene050705.t1 | AT2G36080 | 69.231 | 117 | 31 | 2 | 106 | 219 | 30 | 144 | 3.14e-47 | 161 |
MS.gene050705.t1 | AT2G36080 | 69.231 | 117 | 31 | 2 | 106 | 219 | 30 | 144 | 3.14e-47 | 161 |
MS.gene050705.t1 | AT2G36080 | 69.231 | 117 | 31 | 2 | 106 | 219 | 30 | 144 | 3.56e-47 | 163 |
MS.gene050705.t1 | AT2G36080 | 69.231 | 117 | 31 | 2 | 106 | 219 | 30 | 144 | 3.70e-47 | 163 |
MS.gene050705.t1 | AT5G06250 | 49.206 | 189 | 61 | 5 | 110 | 272 | 42 | 221 | 4.37e-47 | 164 |
MS.gene050705.t1 | AT5G06250 | 49.206 | 189 | 61 | 5 | 110 | 272 | 42 | 221 | 9.41e-47 | 163 |
MS.gene050705.t1 | AT5G06250 | 65.546 | 119 | 29 | 2 | 110 | 218 | 42 | 158 | 1.07e-46 | 163 |
MS.gene050705.t1 | AT1G13260 | 70.536 | 112 | 30 | 2 | 111 | 221 | 185 | 294 | 1.74e-46 | 164 |
MS.gene050705.t1 | AT1G68840 | 68.966 | 116 | 32 | 3 | 106 | 219 | 180 | 293 | 1.85e-46 | 164 |
MS.gene050705.t1 | AT1G68840 | 68.966 | 116 | 32 | 3 | 106 | 219 | 180 | 293 | 1.85e-46 | 164 |
MS.gene050705.t1 | AT5G06250 | 65.546 | 119 | 29 | 2 | 110 | 218 | 42 | 158 | 2.15e-46 | 162 |
MS.gene050705.t1 | AT5G06250 | 65.546 | 119 | 29 | 2 | 110 | 218 | 42 | 158 | 2.25e-46 | 162 |
MS.gene050705.t1 | AT1G25560 | 62.602 | 123 | 36 | 2 | 105 | 219 | 186 | 306 | 1.83e-44 | 159 |
MS.gene050705.t1 | AT3G25730 | 59.524 | 126 | 42 | 3 | 101 | 219 | 166 | 289 | 1.47e-43 | 156 |
MS.gene050705.t1 | AT1G50680 | 50.000 | 100 | 39 | 2 | 112 | 200 | 155 | 254 | 1.42e-25 | 107 |
MS.gene050705.t1 | AT1G51120 | 49.485 | 97 | 41 | 1 | 112 | 200 | 176 | 272 | 3.77e-24 | 103 |
MS.gene050705.t1 | AT4G32010 | 41.053 | 95 | 51 | 3 | 113 | 205 | 285 | 376 | 2.34e-14 | 76.3 |
MS.gene050705.t1 | AT4G32010 | 41.053 | 95 | 51 | 3 | 113 | 205 | 281 | 372 | 2.39e-14 | 75.9 |
MS.gene050705.t1 | AT2G30470 | 39.560 | 91 | 50 | 3 | 113 | 201 | 294 | 381 | 8.00e-14 | 74.3 |
MS.gene050705.t1 | AT2G33860 | 41.304 | 92 | 53 | 1 | 112 | 202 | 157 | 248 | 5.06e-12 | 68.6 |
MS.gene050705.t1 | AT1G35240 | 37.864 | 103 | 58 | 2 | 114 | 210 | 126 | 228 | 1.38e-11 | 67.0 |
MS.gene050705.t1 | AT2G33860 | 40.659 | 91 | 53 | 1 | 113 | 202 | 1 | 91 | 4.72e-11 | 65.1 |
MS.gene050705.t1 | AT5G60450 | 34.426 | 122 | 79 | 1 | 98 | 218 | 137 | 258 | 5.30e-11 | 65.5 |
MS.gene050705.t1 | AT5G60450 | 34.426 | 122 | 79 | 1 | 98 | 218 | 161 | 282 | 5.52e-11 | 65.5 |
MS.gene050705.t1 | AT1G35520 | 36.893 | 103 | 59 | 2 | 114 | 210 | 126 | 228 | 6.41e-11 | 65.1 |
Find 142 sgRNAs with CRISPR-Local
Find 201 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATTTCGATCTTCAAAATTT+AGG | 0.195221 | 7.4:+296901 | None:intergenic |
TTCAGTGGTGCCGGCGATAT+TGG | 0.224155 | 7.4:+295983 | None:intergenic |
GGAAAACGACTGAGACTATT+TGG | 0.226531 | 7.4:-296168 | MS.gene050705:CDS |
CCCTCTTCTACAACAACTTC+TGG | 0.253546 | 7.4:-296069 | MS.gene050705:CDS |
GTAGAAGGGGCAGCGTAATT+AGG | 0.294314 | 7.4:+296528 | None:intergenic |
AACTTCGCTGCACTTTGATT+TGG | 0.298974 | 7.4:-296019 | MS.gene050705:CDS |
TACTTCTCTGCGTGCTGCTT+TGG | 0.305864 | 7.4:+296963 | None:intergenic |
GAATCAATTATCATATTCAT+AGG | 0.331308 | 7.4:+296237 | None:intergenic |
GTGGTTGATGGTGGCGTAAT+TGG | 0.354445 | 7.4:+296342 | None:intergenic |
TGAAGAGGAGGTAGATTTGA+TGG | 0.354882 | 7.4:-297183 | MS.gene050705:CDS |
ATGGTAAGATGTGGAGGTTC+AGG | 0.360401 | 7.4:-296881 | MS.gene050705:CDS |
TCAGTGGTGCCGGCGATATT+GGG | 0.365725 | 7.4:+295984 | None:intergenic |
CGCAGAGAAGTACTTCCCTT+TGG | 0.372478 | 7.4:-296952 | MS.gene050705:CDS |
GAAAACGACTGAGACTATTT+GGG | 0.373722 | 7.4:-296167 | MS.gene050705:CDS |
GGAGGTTCAGGTATTCATAT+TGG | 0.376730 | 7.4:-296869 | MS.gene050705:CDS |
TGAGGATGAGATATTGTAGA+AGG | 0.383802 | 7.4:+296513 | None:intergenic |
AGAGCATATGTTTGATAAAG+TGG | 0.387272 | 7.4:-297027 | MS.gene050705:CDS |
AAAGGATGAGGAGGAGGAGG+AGG | 0.387884 | 7.4:-297081 | MS.gene050705:CDS |
CAGAGTTATGTGATGACAAA+AGG | 0.396646 | 7.4:-296837 | MS.gene050705:CDS |
GAAGGAGGAGGAGGATATTG+AGG | 0.403218 | 7.4:+296654 | None:intergenic |
CCACCAGCTGTGGTGGTTGA+TGG | 0.413549 | 7.4:+296330 | None:intergenic |
AAGGGCAATGACGAAGGATT+AGG | 0.420096 | 7.4:-297128 | MS.gene050705:CDS |
GGGGCAGCGTAATTAGGATT+AGG | 0.420563 | 7.4:+296534 | None:intergenic |
AAAGGCAGTGAAGGAGGAGG+AGG | 0.423144 | 7.4:+296645 | None:intergenic |
AATCATCACTATTCATCATA+TGG | 0.429981 | 7.4:-296609 | MS.gene050705:CDS |
GACGAAGGATTAGGAGGAAT+AGG | 0.436627 | 7.4:-297119 | MS.gene050705:CDS |
TTGATGGAGTTAAGACTTGG+AGG | 0.438088 | 7.4:-297167 | MS.gene050705:CDS |
GAGGGTGGAAGTTGACGATT+AGG | 0.443967 | 7.4:+296087 | None:intergenic |
CCTCTTCTACAACAACTTCT+GGG | 0.444861 | 7.4:-296068 | MS.gene050705:CDS |
GACACAGATTGTACATAGAT+TGG | 0.447780 | 7.4:-296734 | MS.gene050705:CDS |
TAGGAAGGTGAGAATATTGA+GGG | 0.450373 | 7.4:+296553 | None:intergenic |
GATATTGAGGGATGAGGTGG+TGG | 0.450649 | 7.4:+296667 | None:intergenic |
GCGAGGAGGTGAGATAATAG+AGG | 0.457021 | 7.4:+296364 | None:intergenic |
CCGCGGTGATGATGTGCAAC+TGG | 0.459480 | 7.4:+296210 | None:intergenic |
ATCATGATCAACATCACATA+GGG | 0.468716 | 7.4:-296044 | MS.gene050705:CDS |
AGGTGATCAGCAGCAGGAGC+AGG | 0.469663 | 7.4:+296423 | None:intergenic |
AAGGAGGAGGAGGATATTGA+GGG | 0.471785 | 7.4:+296655 | None:intergenic |
AGATAGAAAGGCAGTGAAGG+AGG | 0.473602 | 7.4:+296639 | None:intergenic |
GATTCTTCTACCAACGAGAA+AGG | 0.473959 | 7.4:-296930 | MS.gene050705:CDS |
TTAGGAAGGTGAGAATATTG+AGG | 0.476881 | 7.4:+296552 | None:intergenic |
GAGTTAAGACTTGGAGGAGG+GGG | 0.479014 | 7.4:-297161 | MS.gene050705:CDS |
TGGAGTTAAGACTTGGAGGA+GGG | 0.479526 | 7.4:-297163 | MS.gene050705:CDS |
AAGGGTATTGTTCTGATAGC+AGG | 0.479960 | 7.4:-297895 | MS.gene050705:CDS |
CGGCGATATTGGGAATTAGA+AGG | 0.483289 | 7.4:+295994 | None:intergenic |
GGAAGATAGAAAGGCAGTGA+AGG | 0.488358 | 7.4:+296636 | None:intergenic |
CGAGGAGGTGAGATAATAGA+GGG | 0.488870 | 7.4:+296365 | None:intergenic |
GATTTGATGGAGTTAAGACT+TGG | 0.489573 | 7.4:-297170 | MS.gene050705:CDS |
GATGATATCATCGCAATCAC+TGG | 0.492831 | 7.4:-297851 | MS.gene050705:CDS |
TATGATGAATAGTGATGATT+GGG | 0.494045 | 7.4:+296612 | None:intergenic |
TAGAAAGGCAGTGAAGGAGG+AGG | 0.500085 | 7.4:+296642 | None:intergenic |
CAGCAGCAGGAGCAGGGTGG+TGG | 0.502611 | 7.4:+296430 | None:intergenic |
TTCAAAGGATGAGGAGGAGG+AGG | 0.506022 | 7.4:-297084 | MS.gene050705:CDS |
GAGGATGAGATATTGTAGAA+GGG | 0.507152 | 7.4:+296514 | None:intergenic |
CCACCATCAACCACCACAGC+TGG | 0.507318 | 7.4:-296333 | MS.gene050705:CDS |
ATTCTTCTACCAACGAGAAA+GGG | 0.509922 | 7.4:-296929 | MS.gene050705:CDS |
ATATGATGAATAGTGATGAT+TGG | 0.513248 | 7.4:+296611 | None:intergenic |
TTCTTCAAATTCAAAGGATG+AGG | 0.513842 | 7.4:-297093 | MS.gene050705:CDS |
TTCTTCTTCAGCACCACCAC+AGG | 0.518188 | 7.4:-296118 | MS.gene050705:CDS |
AGGATGTTCTTCAAATTCAA+AGG | 0.518491 | 7.4:-297099 | MS.gene050705:CDS |
AGGGTGGAGCCGTTTCGTTA+AGG | 0.519476 | 7.4:-296817 | MS.gene050705:CDS |
TTTCAGGGATCCGTGGTGCA+AGG | 0.522724 | 7.4:-296291 | MS.gene050705:CDS |
TGATTGGGAGGAAGATAGAA+AGG | 0.523415 | 7.4:+296627 | None:intergenic |
ATTTGATGGAACAAGTGAAA+GGG | 0.525706 | 7.4:-297913 | None:intergenic |
AGGATGAGATATTGTAGAAG+GGG | 0.527536 | 7.4:+296515 | None:intergenic |
AAATTGTTGTTGTAATATTG+AGG | 0.530975 | 7.4:+296495 | None:intergenic |
GCTTCTTCTCCTTAACGAAA+CGG | 0.533546 | 7.4:+296808 | None:intergenic |
GAGACTATTTGGGGTTAACA+TGG | 0.535206 | 7.4:-296157 | MS.gene050705:CDS |
GATATGATCTTCAGTGGTGC+CGG | 0.535398 | 7.4:+295974 | None:intergenic |
CACTATTCATCATATGGTGG+TGG | 0.538090 | 7.4:-296603 | MS.gene050705:CDS |
ATGGAGTTAAGACTTGGAGG+AGG | 0.540445 | 7.4:-297164 | MS.gene050705:CDS |
TATTCATCATATGGTGGTGG+TGG | 0.541933 | 7.4:-296600 | MS.gene050705:CDS |
GGAGTTAAGACTTGGAGGAG+GGG | 0.544084 | 7.4:-297162 | MS.gene050705:CDS |
TTCAGGGATCCGTGGTGCAA+GGG | 0.545428 | 7.4:-296290 | MS.gene050705:CDS |
CGTTGGTAGAAGAATCCAAA+GGG | 0.545569 | 7.4:+296937 | None:intergenic |
AGGGTTACAGACGTCACAGC+TGG | 0.549480 | 7.4:-297252 | MS.gene050705:CDS |
AAGGAGAAGAAGCTTGATGC+TGG | 0.549529 | 7.4:-296798 | MS.gene050705:CDS |
GAGGATATTGAGGGATGAGG+TGG | 0.549967 | 7.4:+296664 | None:intergenic |
TTCAAATTCAAAGGATGAGG+AGG | 0.550070 | 7.4:-297090 | MS.gene050705:CDS |
TGTACATAGATTGGAGGCCA+AGG | 0.550302 | 7.4:-296725 | MS.gene050705:CDS |
CCCAGAAGTTGTTGTAGAAG+AGG | 0.550466 | 7.4:+296068 | None:intergenic |
AAATTCAAAGGATGAGGAGG+AGG | 0.551226 | 7.4:-297087 | MS.gene050705:CDS |
AATTTGATGGAACAAGTGAA+AGG | 0.556860 | 7.4:-297914 | None:intergenic |
TTCAGCTTCCCTACGTCACT+AGG | 0.557671 | 7.4:+296999 | None:intergenic |
AGAGTTATGTGATGACAAAA+GGG | 0.563519 | 7.4:-296836 | MS.gene050705:CDS |
GAGGAGGATATTGAGGGATG+AGG | 0.567145 | 7.4:+296661 | None:intergenic |
GGCAATGACGAAGGATTAGG+AGG | 0.574623 | 7.4:-297125 | MS.gene050705:CDS |
TTAACAAGGTGATCAGCAGC+AGG | 0.575298 | 7.4:+296417 | None:intergenic |
TGTGCAATTCAGCACGTCCA+CGG | 0.575558 | 7.4:+296757 | None:intergenic |
ATCATCGCAATCACTGGAGG+AGG | 0.576968 | 7.4:-297845 | MS.gene050705:CDS |
CCAGAAGTTGTTGTAGAAGA+GGG | 0.577780 | 7.4:+296069 | None:intergenic |
AATCAATTATCATATTCATA+GGG | 0.579857 | 7.4:+296238 | None:intergenic |
TGATAGCAGGGACGAAGAGG+AGG | 0.581064 | 7.4:-297882 | MS.gene050705:CDS |
GAGTACTGAGAGTGTGCCCT+TGG | 0.581237 | 7.4:+296708 | None:intergenic |
CTTCTAATTCCCAATATCGC+CGG | 0.581436 | 7.4:-295993 | MS.gene050705:CDS |
TTAGGCATTGCCGCCTGTGG+TGG | 0.586107 | 7.4:+296105 | None:intergenic |
GATCATGATCAACATCACAT+AGG | 0.586128 | 7.4:-296045 | MS.gene050705:CDS |
ATCGAAATGGTAAGATGTGG+AGG | 0.587159 | 7.4:-296887 | MS.gene050705:CDS |
TTCTGATAGCAGGGACGAAG+AGG | 0.587446 | 7.4:-297885 | MS.gene050705:CDS |
CACACCACCACCAGCTGTGG+TGG | 0.589837 | 7.4:+296323 | None:intergenic |
TGGGAAGTTGAATGAAGAGG+AGG | 0.590300 | 7.4:-297195 | MS.gene050705:CDS |
CACCACAGCTGGTGGTGGTG+TGG | 0.591127 | 7.4:-296322 | MS.gene050705:CDS |
GGTGATCAGCAGCAGGAGCA+GGG | 0.594253 | 7.4:+296424 | None:intergenic |
AAGATCGAAATGGTAAGATG+TGG | 0.599172 | 7.4:-296890 | MS.gene050705:CDS |
AGGGTATTGTTCTGATAGCA+GGG | 0.599445 | 7.4:-297894 | MS.gene050705:CDS |
ATCCACACCACCACCAGCTG+TGG | 0.603339 | 7.4:+296320 | None:intergenic |
ACAGATTGTACATAGATTGG+AGG | 0.603584 | 7.4:-296731 | MS.gene050705:CDS |
TAGTATTAACATTGCCTCCG+CGG | 0.604612 | 7.4:+296193 | None:intergenic |
TAGGAGAAGCCCTTTCTCGT+TGG | 0.605407 | 7.4:+296920 | None:intergenic |
CGATTAGGCATTGCCGCCTG+TGG | 0.607948 | 7.4:+296102 | None:intergenic |
AGGAAGGTGAGAATATTGAG+GGG | 0.607953 | 7.4:+296554 | None:intergenic |
CCATCAACCACCACAGCTGG+TGG | 0.608577 | 7.4:-296330 | MS.gene050705:CDS |
AGCAGGGACGAAGAGGAGGA+AGG | 0.609762 | 7.4:-297878 | MS.gene050705:CDS |
AAGGTGAGAATATTGAGGGG+AGG | 0.614133 | 7.4:+296557 | None:intergenic |
CCAGCTGTGGTGGTTGATGG+TGG | 0.616460 | 7.4:+296333 | None:intergenic |
CTCTTCTACAACAACTTCTG+GGG | 0.618726 | 7.4:-296067 | MS.gene050705:CDS |
TGGTGACACCTAGTGACGTA+GGG | 0.621412 | 7.4:-297007 | MS.gene050705:CDS |
AAGAGCAAGGGCAATGACGA+AGG | 0.626355 | 7.4:-297134 | MS.gene050705:CDS |
CATCACTATTCATCATATGG+TGG | 0.627152 | 7.4:-296606 | MS.gene050705:CDS |
GAAGTTGTTGTAGAAGAGGG+TGG | 0.628343 | 7.4:+296072 | None:intergenic |
CAGCGTAATTAGGATTAGGA+AGG | 0.629941 | 7.4:+296538 | None:intergenic |
TCAACCACCACAGCTGGTGG+TGG | 0.631467 | 7.4:-296327 | MS.gene050705:CDS |
TTCTTCAGCACCACCACAGG+CGG | 0.633356 | 7.4:-296115 | MS.gene050705:CDS |
AAAACGACTGAGACTATTTG+GGG | 0.634135 | 7.4:-296166 | MS.gene050705:CDS |
GATGAATAGTGATGATTGGG+AGG | 0.640962 | 7.4:+296615 | None:intergenic |
GAGGAGGTGAGATAATAGAG+GGG | 0.642836 | 7.4:+296366 | None:intergenic |
GGTTGGGAAGTTGAATGAAG+AGG | 0.643292 | 7.4:-297198 | MS.gene050705:CDS |
GTGGTGACACCTAGTGACGT+AGG | 0.643690 | 7.4:-297008 | MS.gene050705:CDS |
TGATGGTGGCGTAATTGGCG+AGG | 0.643835 | 7.4:+296347 | None:intergenic |
GATATCATCGCAATCACTGG+AGG | 0.662602 | 7.4:-297848 | MS.gene050705:CDS |
GTACATAGATTGGAGGCCAA+GGG | 0.664207 | 7.4:-296724 | MS.gene050705:CDS |
GGAGGCAATGTTAATACTAG+CGG | 0.665755 | 7.4:-296189 | MS.gene050705:CDS |
GTTATGTGATGACAAAAGGG+TGG | 0.673333 | 7.4:-296833 | MS.gene050705:CDS |
TTGTTGATGCCCTTGCACCA+CGG | 0.680815 | 7.4:+296281 | None:intergenic |
TCGTTGGTAGAAGAATCCAA+AGG | 0.680986 | 7.4:+296936 | None:intergenic |
CATGATCAACATCACATAGG+GGG | 0.690937 | 7.4:-296042 | MS.gene050705:CDS |
GTTGCACATCATCACCGCGG+AGG | 0.703943 | 7.4:-296207 | MS.gene050705:CDS |
GATCAGCAGCAGGAGCAGGG+TGG | 0.705208 | 7.4:+296427 | None:intergenic |
TCATGATCAACATCACATAG+GGG | 0.705858 | 7.4:-296043 | MS.gene050705:CDS |
TGGTGGCGTAATTGGCGAGG+AGG | 0.722964 | 7.4:+296350 | None:intergenic |
GCAATTCAGCACGTCCACGG+TGG | 0.740263 | 7.4:+296760 | None:intergenic |
CCAGTTGCACATCATCACCG+CGG | 0.781500 | 7.4:-296210 | MS.gene050705:CDS |
GACATTGTATCATTCCACCG+TGG | 0.786574 | 7.4:-296774 | MS.gene050705:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAAGAAAAGAAAAAAAA+TGG | + | chr7.4:296111-296130 | None:intergenic | 10.0% |
!! | AAAAAGAAAAGAAAAAAAAT+GGG | + | chr7.4:296110-296129 | None:intergenic | 10.0% |
!! | AAATCCTAATAATAATAATA+AGG | + | chr7.4:296394-296413 | None:intergenic | 10.0% |
!! | AATCCTAATAATAATAATAA+GGG | + | chr7.4:296393-296412 | None:intergenic | 10.0% |
!! | AAATCAATTCAATCTATATT+TGG | - | chr7.4:296561-296580 | MS.gene050705:CDS | 15.0% |
!! | AATCAATTATCATATTCATA+GGG | + | chr7.4:297657-297676 | None:intergenic | 15.0% |
!! | TTAATAAATACATGTATTGA+TGG | - | chr7.4:296486-296505 | MS.gene050705:CDS | 15.0% |
!! | ACGTATAATTAAGAATAAGA+TGG | + | chr7.4:296454-296473 | None:intergenic | 20.0% |
!! | ATTATTAGGAAAATGTTAAC+CGG | - | chr7.4:296212-296231 | MS.gene050705:CDS | 20.0% |
!! | CAACCCTTATTATTATTATT+AGG | - | chr7.4:296387-296406 | MS.gene050705:CDS | 20.0% |
!! | GAATCAATTATCATATTCAT+AGG | + | chr7.4:297658-297677 | None:intergenic | 20.0% |
!!! | AAATTGTTGTTGTAATATTG+AGG | + | chr7.4:297400-297419 | None:intergenic | 20.0% |
! | AATCATCACTATTCATCATA+TGG | - | chr7.4:297283-297302 | MS.gene050705:intron | 25.0% |
! | ATATGATGAATAGTGATGAT+TGG | + | chr7.4:297284-297303 | None:intergenic | 25.0% |
! | CATTGAAAATTGTGTAATCA+AGG | - | chr7.4:296278-296297 | MS.gene050705:CDS | 25.0% |
! | CATTTCGATCTTCAAAATTT+AGG | + | chr7.4:296994-297013 | None:intergenic | 25.0% |
! | TATGATGAATAGTGATGATT+GGG | + | chr7.4:297283-297302 | None:intergenic | 25.0% |
! | TCAATTCAATCTATATTTGG+TGG | - | chr7.4:296564-296583 | MS.gene050705:CDS | 25.0% |
!! | ATGAATTAATTTGATCCACT+TGG | - | chr7.4:296610-296629 | MS.gene050705:CDS | 25.0% |
!!! | CTAAATTTTGAAGATCGAAA+TGG | - | chr7.4:296992-297011 | MS.gene050705:CDS | 25.0% |
AGAGCATATGTTTGATAAAG+TGG | - | chr7.4:296865-296884 | MS.gene050705:CDS | 30.0% | |
AGAGTTATGTGATGACAAAA+GGG | - | chr7.4:297056-297075 | MS.gene050705:CDS | 30.0% | |
AGGATGTTCTTCAAATTCAA+AGG | - | chr7.4:296793-296812 | MS.gene050705:CDS | 30.0% | |
ATAATAAGGGTTGTGTTAAC+CGG | + | chr7.4:296380-296399 | None:intergenic | 30.0% | |
ATCATGATCAACATCACATA+GGG | - | chr7.4:297848-297867 | MS.gene050705:CDS | 30.0% | |
GATAGATAGATAGATATGCA+TGG | + | chr7.4:296148-296167 | None:intergenic | 30.0% | |
TGATCCACTTGGTATAATTA+GGG | - | chr7.4:296621-296640 | MS.gene050705:CDS | 30.0% | |
TTCTTCAAATTCAAAGGATG+AGG | - | chr7.4:296799-296818 | MS.gene050705:CDS | 30.0% | |
TTGATCCACTTGGTATAATT+AGG | - | chr7.4:296620-296639 | MS.gene050705:CDS | 30.0% | |
! | CTGGTTAAGGTATCTAAAAA+TGG | + | chr7.4:296344-296363 | None:intergenic | 30.0% |
AAAACGACTGAGACTATTTG+GGG | - | chr7.4:297726-297745 | MS.gene050705:intron | 35.0% | |
AAGAAGAAGAAGAAGATGTG+GGG | - | chr7.4:296672-296691 | MS.gene050705:CDS | 35.0% | |
AAGATCGAAATGGTAAGATG+TGG | - | chr7.4:297002-297021 | MS.gene050705:CDS | 35.0% | |
ACAGATTGTACATAGATTGG+AGG | - | chr7.4:297161-297180 | MS.gene050705:CDS | 35.0% | |
AGAAGAAGAAGAAGAAGATG+TGG | - | chr7.4:296670-296689 | MS.gene050705:CDS | 35.0% | |
AGGATGAGATATTGTAGAAG+GGG | + | chr7.4:297380-297399 | None:intergenic | 35.0% | |
ATTCTTCTACCAACGAGAAA+GGG | - | chr7.4:296963-296982 | MS.gene050705:CDS | 35.0% | |
CAGAGTTATGTGATGACAAA+AGG | - | chr7.4:297055-297074 | MS.gene050705:CDS | 35.0% | |
CATCACTATTCATCATATGG+TGG | - | chr7.4:297286-297305 | MS.gene050705:intron | 35.0% | |
GAAAACGACTGAGACTATTT+GGG | - | chr7.4:297725-297744 | MS.gene050705:intron | 35.0% | |
GAAGAAGAAGAAGAAGATGT+GGG | - | chr7.4:296671-296690 | MS.gene050705:CDS | 35.0% | |
GACACAGATTGTACATAGAT+TGG | - | chr7.4:297158-297177 | MS.gene050705:CDS | 35.0% | |
GAGGATGAGATATTGTAGAA+GGG | + | chr7.4:297381-297400 | None:intergenic | 35.0% | |
GATCATGATCAACATCACAT+AGG | - | chr7.4:297847-297866 | MS.gene050705:CDS | 35.0% | |
GATTTGATGGAGTTAAGACT+TGG | - | chr7.4:296722-296741 | MS.gene050705:CDS | 35.0% | |
GTAACCCTAATTATACCAAG+TGG | + | chr7.4:296628-296647 | None:intergenic | 35.0% | |
TAGGAAGGTGAGAATATTGA+GGG | + | chr7.4:297342-297361 | None:intergenic | 35.0% | |
TCATGATCAACATCACATAG+GGG | - | chr7.4:297849-297868 | MS.gene050705:CDS | 35.0% | |
TGAGGATGAGATATTGTAGA+AGG | + | chr7.4:297382-297401 | None:intergenic | 35.0% | |
TTAGGAAGGTGAGAATATTG+AGG | + | chr7.4:297343-297362 | None:intergenic | 35.0% | |
TTCAAATTCAAAGGATGAGG+AGG | - | chr7.4:296802-296821 | MS.gene050705:CDS | 35.0% | |
! | CTTTTGTCATCACATAACTC+TGG | + | chr7.4:297057-297076 | None:intergenic | 35.0% |
AAATTCAAAGGATGAGGAGG+AGG | - | chr7.4:296805-296824 | MS.gene050705:CDS | 40.0% | |
AACTTCGCTGCACTTTGATT+TGG | - | chr7.4:297873-297892 | MS.gene050705:CDS | 40.0% | |
ACCAAAATGAATCCATGGTC+GGG | - | chr7.4:296515-296534 | MS.gene050705:CDS | 40.0% | |
AGAAGAAGAAGAAGATGTGG+GGG | - | chr7.4:296673-296692 | MS.gene050705:CDS | 40.0% | |
AGGAAGGTGAGAATATTGAG+GGG | + | chr7.4:297341-297360 | None:intergenic | 40.0% | |
ATCGAAATGGTAAGATGTGG+AGG | - | chr7.4:297005-297024 | MS.gene050705:CDS | 40.0% | |
CACCAAAATGAATCCATGGT+CGG | - | chr7.4:296514-296533 | MS.gene050705:CDS | 40.0% | |
CACTATTCATCATATGGTGG+TGG | - | chr7.4:297289-297308 | MS.gene050705:intron | 40.0% | |
CAGCGTAATTAGGATTAGGA+AGG | + | chr7.4:297357-297376 | None:intergenic | 40.0% | |
CATGATCAACATCACATAGG+GGG | - | chr7.4:297850-297869 | MS.gene050705:CDS | 40.0% | |
CCAGAAGTTGTTGTAGAAGA+GGG | + | chr7.4:297826-297845 | None:intergenic | 40.0% | |
CCTCTTCTACAACAACTTCT+GGG | - | chr7.4:297824-297843 | MS.gene050705:intron | 40.0% | |
CTCTTCTACAACAACTTCTG+GGG | - | chr7.4:297825-297844 | MS.gene050705:CDS | 40.0% | |
CTTCTAATTCCCAATATCGC+CGG | - | chr7.4:297899-297918 | MS.gene050705:CDS | 40.0% | |
GATGAATAGTGATGATTGGG+AGG | + | chr7.4:297280-297299 | None:intergenic | 40.0% | |
GATGATATCATCGCAATCAC+TGG | - | chr7.4:296041-296060 | MS.gene050705:CDS | 40.0% | |
GATTCTTCTACCAACGAGAA+AGG | - | chr7.4:296962-296981 | MS.gene050705:CDS | 40.0% | |
GCTTCTTCTCCTTAACGAAA+CGG | + | chr7.4:297087-297106 | None:intergenic | 40.0% | |
GGAAAACGACTGAGACTATT+TGG | - | chr7.4:297724-297743 | MS.gene050705:intron | 40.0% | |
GGAGGCAATGTTAATACTAG+CGG | - | chr7.4:297703-297722 | MS.gene050705:intron | 40.0% | |
GGAGGTTCAGGTATTCATAT+TGG | - | chr7.4:297023-297042 | MS.gene050705:CDS | 40.0% | |
GTTATGTGATGACAAAAGGG+TGG | - | chr7.4:297059-297078 | MS.gene050705:CDS | 40.0% | |
TAGTATTAACATTGCCTCCG+CGG | + | chr7.4:297702-297721 | None:intergenic | 40.0% | |
TCCACACCAAAATGAATCCA+TGG | - | chr7.4:296510-296529 | MS.gene050705:CDS | 40.0% | |
TGAAGAGGAGGTAGATTTGA+TGG | - | chr7.4:296709-296728 | MS.gene050705:CDS | 40.0% | |
TGATTGGGAGGAAGATAGAA+AGG | + | chr7.4:297268-297287 | None:intergenic | 40.0% | |
TTGATGGAGTTAAGACTTGG+AGG | - | chr7.4:296725-296744 | MS.gene050705:CDS | 40.0% | |
! | CGTTGGTAGAAGAATCCAAA+GGG | + | chr7.4:296958-296977 | None:intergenic | 40.0% |
! | GAGACTATTTGGGGTTAACA+TGG | - | chr7.4:297735-297754 | MS.gene050705:intron | 40.0% |
! | GGTGTGGATCAACATTTTCA+GGG | - | chr7.4:297586-297605 | MS.gene050705:intron | 40.0% |
! | TCGTTGGTAGAAGAATCCAA+AGG | + | chr7.4:296959-296978 | None:intergenic | 40.0% |
! | TGGTGTGGATCAACATTTTC+AGG | - | chr7.4:297585-297604 | MS.gene050705:intron | 40.0% |
!! | AAGGGTATTGTTCTGATAGC+AGG | - | chr7.4:295997-296016 | MS.gene050705:CDS | 40.0% |
!! | ACCATGGATTCATTTTGGTG+TGG | + | chr7.4:296514-296533 | None:intergenic | 40.0% |
!! | AGGGTATTGTTCTGATAGCA+GGG | - | chr7.4:295998-296017 | MS.gene050705:CDS | 40.0% |
!! | TATTCATCATATGGTGGTGG+TGG | - | chr7.4:297292-297311 | MS.gene050705:intron | 40.0% |
AAGAAGAAGATGTGGGGGTT+GGG | - | chr7.4:296678-296697 | MS.gene050705:CDS | 45.0% | |
AAGGAGAAGAAGCTTGATGC+TGG | - | chr7.4:297094-297113 | MS.gene050705:CDS | 45.0% | |
AAGGAGGAGGAGGATATTGA+GGG | + | chr7.4:297240-297259 | None:intergenic | 45.0% | |
AAGGGCAATGACGAAGGATT+AGG | - | chr7.4:296764-296783 | MS.gene050705:CDS | 45.0% | |
AAGGTGAGAATATTGAGGGG+AGG | + | chr7.4:297338-297357 | None:intergenic | 45.0% | |
AGATAGAAAGGCAGTGAAGG+AGG | + | chr7.4:297256-297275 | None:intergenic | 45.0% | |
ATGGAGTTAAGACTTGGAGG+AGG | - | chr7.4:296728-296747 | MS.gene050705:CDS | 45.0% | |
ATGGTAAGATGTGGAGGTTC+AGG | - | chr7.4:297011-297030 | MS.gene050705:CDS | 45.0% | |
CCAAAATGAATCCATGGTCG+GGG | - | chr7.4:296516-296535 | MS.gene050705:CDS | 45.0% | |
CCCAGAAGTTGTTGTAGAAG+AGG | + | chr7.4:297827-297846 | None:intergenic | 45.0% | |
CCCTCTTCTACAACAACTTC+TGG | - | chr7.4:297823-297842 | MS.gene050705:intron | 45.0% | |
CGAGGAGGTGAGATAATAGA+GGG | + | chr7.4:297530-297549 | None:intergenic | 45.0% | |
CGGCGATATTGGGAATTAGA+AGG | + | chr7.4:297901-297920 | None:intergenic | 45.0% | |
GAAGTTGTTGTAGAAGAGGG+TGG | + | chr7.4:297823-297842 | None:intergenic | 45.0% | |
GACATTGTATCATTCCACCG+TGG | - | chr7.4:297118-297137 | MS.gene050705:CDS | 45.0% | |
GACGAAGGATTAGGAGGAAT+AGG | - | chr7.4:296773-296792 | MS.gene050705:CDS | 45.0% | |
GAGGAGGTGAGATAATAGAG+GGG | + | chr7.4:297529-297548 | None:intergenic | 45.0% | |
GATATCATCGCAATCACTGG+AGG | - | chr7.4:296044-296063 | MS.gene050705:CDS | 45.0% | |
GGAAGATAGAAAGGCAGTGA+AGG | + | chr7.4:297259-297278 | None:intergenic | 45.0% | |
GGTTGGGAAGTTGAATGAAG+AGG | - | chr7.4:296694-296713 | MS.gene050705:CDS | 45.0% | |
GTACATAGATTGGAGGCCAA+GGG | - | chr7.4:297168-297187 | MS.gene050705:CDS | 45.0% | |
TGGAGTTAAGACTTGGAGGA+GGG | - | chr7.4:296729-296748 | MS.gene050705:CDS | 45.0% | |
TGGGAAGTTGAATGAAGAGG+AGG | - | chr7.4:296697-296716 | MS.gene050705:CDS | 45.0% | |
TGTACATAGATTGGAGGCCA+AGG | - | chr7.4:297167-297186 | MS.gene050705:CDS | 45.0% | |
TTAACAAGGTGATCAGCAGC+AGG | + | chr7.4:297478-297497 | None:intergenic | 45.0% | |
!! | TCAACATTTTCAGGGATCCG+TGG | - | chr7.4:297594-297613 | MS.gene050705:intron | 45.0% |
!! | ATTAAACTATTATTATTATT+AGG | - | chr7.4:296198-296217 | MS.gene050705:CDS | 5.0% |
!! | TATTATTATTATTATTAACA+AGG | + | chr7.4:297492-297511 | None:intergenic | 5.0% |
!! | TTCAAAAAAAAAAAAAAAAT+TGG | + | chr7.4:296423-296442 | None:intergenic | 5.0% |
AAAATGTTAACCGGTGCCCC+CGG | - | chr7.4:296221-296240 | MS.gene050705:CDS | 50.0% | |
AAGAGCAAGGGCAATGACGA+AGG | - | chr7.4:296758-296777 | MS.gene050705:CDS | 50.0% | |
AGATACCTTAACCAGTGCCC+CGG | - | chr7.4:296349-296368 | MS.gene050705:CDS | 50.0% | |
ATCATCGCAATCACTGGAGG+AGG | - | chr7.4:296047-296066 | MS.gene050705:CDS | 50.0% | |
ATGAATCCATGGTCGGGGTT+TGG | - | chr7.4:296521-296540 | MS.gene050705:CDS | 50.0% | |
GAAGAAGAAGATGTGGGGGT+TGG | - | chr7.4:296677-296696 | MS.gene050705:CDS | 50.0% | |
GAAGGAGGAGGAGGATATTG+AGG | + | chr7.4:297241-297260 | None:intergenic | 50.0% | |
GAGGAGGATATTGAGGGATG+AGG | + | chr7.4:297234-297253 | None:intergenic | 50.0% | |
GAGGATATTGAGGGATGAGG+TGG | + | chr7.4:297231-297250 | None:intergenic | 50.0% | |
GAGGGTGGAAGTTGACGATT+AGG | + | chr7.4:297808-297827 | None:intergenic | 50.0% | |
GAGTTAAGACTTGGAGGAGG+GGG | - | chr7.4:296731-296750 | MS.gene050705:CDS | 50.0% | |
GATATTGAGGGATGAGGTGG+TGG | + | chr7.4:297228-297247 | None:intergenic | 50.0% | |
GCGAGGAGGTGAGATAATAG+AGG | + | chr7.4:297531-297550 | None:intergenic | 50.0% | |
GGAGTTAAGACTTGGAGGAG+GGG | - | chr7.4:296730-296749 | MS.gene050705:CDS | 50.0% | |
GGCAATGACGAAGGATTAGG+AGG | - | chr7.4:296767-296786 | MS.gene050705:CDS | 50.0% | |
GGGGCAGCGTAATTAGGATT+AGG | + | chr7.4:297361-297380 | None:intergenic | 50.0% | |
GTAGAAGGGGCAGCGTAATT+AGG | + | chr7.4:297367-297386 | None:intergenic | 50.0% | |
TAGAAAGGCAGTGAAGGAGG+AGG | + | chr7.4:297253-297272 | None:intergenic | 50.0% | |
TAGGAGAAGCCCTTTCTCGT+TGG | + | chr7.4:296975-296994 | None:intergenic | 50.0% | |
TGAATCCATGGTCGGGGTTT+GGG | - | chr7.4:296522-296541 | MS.gene050705:CDS | 50.0% | |
TGGTGACACCTAGTGACGTA+GGG | - | chr7.4:296885-296904 | MS.gene050705:CDS | 50.0% | |
TGTGCAATTCAGCACGTCCA+CGG | + | chr7.4:297138-297157 | None:intergenic | 50.0% | |
TTCAAAGGATGAGGAGGAGG+AGG | - | chr7.4:296808-296827 | MS.gene050705:CDS | 50.0% | |
TTCAGCTTCCCTACGTCACT+AGG | + | chr7.4:296896-296915 | None:intergenic | 50.0% | |
TTCTGATAGCAGGGACGAAG+AGG | - | chr7.4:296007-296026 | MS.gene050705:CDS | 50.0% | |
TTCTTCTTCAGCACCACCAC+AGG | - | chr7.4:297774-297793 | MS.gene050705:intron | 50.0% | |
TTGCTTCCTTAACCAGTGCC+CGG | + | chr7.4:296243-296262 | None:intergenic | 50.0% | |
TTGTTGATGCCCTTGCACCA+CGG | + | chr7.4:297614-297633 | None:intergenic | 50.0% | |
! | CCCCGACCATGGATTCATTT+TGG | + | chr7.4:296519-296538 | None:intergenic | 50.0% |
!! | CGCAGAGAAGTACTTCCCTT+TGG | - | chr7.4:296940-296959 | MS.gene050705:CDS | 50.0% |
!! | GTGGTTGATGGTGGCGTAAT+TGG | + | chr7.4:297553-297572 | None:intergenic | 50.0% |
!! | TACTTCTCTGCGTGCTGCTT+TGG | + | chr7.4:296932-296951 | None:intergenic | 50.0% |
AAAGGATGAGGAGGAGGAGG+AGG | - | chr7.4:296811-296830 | MS.gene050705:CDS | 55.0% | |
AAAGGCAGTGAAGGAGGAGG+AGG | + | chr7.4:297250-297269 | None:intergenic | 55.0% | |
AAATGTTAACCGGTGCCCCC+GGG | - | chr7.4:296222-296241 | MS.gene050705:CDS | 55.0% | |
AAGATCCCAAACCCCGACCA+TGG | + | chr7.4:296530-296549 | None:intergenic | 55.0% | |
AGGGTGGAGCCGTTTCGTTA+AGG | - | chr7.4:297075-297094 | MS.gene050705:CDS | 55.0% | |
AGGGTTACAGACGTCACAGC+TGG | - | chr7.4:296640-296659 | MS.gene050705:CDS | 55.0% | |
ATACCTTAACCAGTGCCCCG+GGG | - | chr7.4:296351-296370 | MS.gene050705:CDS | 55.0% | |
CCAGTTGCACATCATCACCG+CGG | - | chr7.4:297682-297701 | MS.gene050705:intron | 55.0% | |
GATACCTTAACCAGTGCCCC+GGG | - | chr7.4:296350-296369 | MS.gene050705:CDS | 55.0% | |
GTGGTGACACCTAGTGACGT+AGG | - | chr7.4:296884-296903 | MS.gene050705:CDS | 55.0% | |
TGATAGCAGGGACGAAGAGG+AGG | - | chr7.4:296010-296029 | MS.gene050705:CDS | 55.0% | |
TGCTTCCTTAACCAGTGCCC+GGG | + | chr7.4:296242-296261 | None:intergenic | 55.0% | |
TTCAGGGATCCGTGGTGCAA+GGG | - | chr7.4:297602-297621 | MS.gene050705:intron | 55.0% | |
TTCTTCAGCACCACCACAGG+CGG | - | chr7.4:297777-297796 | MS.gene050705:intron | 55.0% | |
TTTCAGGGATCCGTGGTGCA+AGG | - | chr7.4:297601-297620 | MS.gene050705:intron | 55.0% | |
!! | GAGTACTGAGAGTGTGCCCT+TGG | + | chr7.4:297187-297206 | None:intergenic | 55.0% |
!! | TCAGTGGTGCCGGCGATATT+GGG | + | chr7.4:297911-297930 | None:intergenic | 55.0% |
!! | TGATGGTGGCGTAATTGGCG+AGG | + | chr7.4:297548-297567 | None:intergenic | 55.0% |
AGCAGGGACGAAGAGGAGGA+AGG | - | chr7.4:296014-296033 | MS.gene050705:CDS | 60.0% | |
AGGAGGGGGAAGCAAGAGCA+AGG | - | chr7.4:296745-296764 | MS.gene050705:CDS | 60.0% | |
AGGTGATCAGCAGCAGGAGC+AGG | + | chr7.4:297472-297491 | None:intergenic | 60.0% | |
ATCCACACCACCACCAGCTG+TGG | + | chr7.4:297575-297594 | None:intergenic | 60.0% | |
CCACCAGCTGTGGTGGTTGA+TGG | + | chr7.4:297565-297584 | None:intergenic | 60.0% | |
CCACCATCAACCACCACAGC+TGG | - | chr7.4:297559-297578 | MS.gene050705:intron | 60.0% | |
CCATCAACCACCACAGCTGG+TGG | - | chr7.4:297562-297581 | MS.gene050705:intron | 60.0% | |
CTTCCTTAACCAGTGCCCGG+GGG | + | chr7.4:296240-296259 | None:intergenic | 60.0% | |
GCAATTCAGCACGTCCACGG+TGG | + | chr7.4:297135-297154 | None:intergenic | 60.0% | |
GCTTCCTTAACCAGTGCCCG+GGG | + | chr7.4:296241-296260 | None:intergenic | 60.0% | |
GGAGGGGGAAGCAAGAGCAA+GGG | - | chr7.4:296746-296765 | MS.gene050705:CDS | 60.0% | |
GGTGATCAGCAGCAGGAGCA+GGG | + | chr7.4:297471-297490 | None:intergenic | 60.0% | |
GTTGCACATCATCACCGCGG+AGG | - | chr7.4:297685-297704 | MS.gene050705:intron | 60.0% | |
GTTGTGTTAACCGGTGCCCC+CGG | + | chr7.4:296371-296390 | None:intergenic | 60.0% | |
TACCTTAACCAGTGCCCCGG+GGG | - | chr7.4:296352-296371 | MS.gene050705:CDS | 60.0% | |
TCAACCACCACAGCTGGTGG+TGG | - | chr7.4:297565-297584 | MS.gene050705:intron | 60.0% | |
TTGTGTTAACCGGTGCCCCC+GGG | + | chr7.4:296370-296389 | None:intergenic | 60.0% | |
! | CCGCGGTGATGATGTGCAAC+TGG | + | chr7.4:297685-297704 | None:intergenic | 60.0% |
! | CGATTAGGCATTGCCGCCTG+TGG | + | chr7.4:297793-297812 | None:intergenic | 60.0% |
! | TGGTGGCGTAATTGGCGAGG+AGG | + | chr7.4:297545-297564 | None:intergenic | 60.0% |
! | TTAGGCATTGCCGCCTGTGG+TGG | + | chr7.4:297790-297809 | None:intergenic | 60.0% |
!! | CCAGCTGTGGTGGTTGATGG+TGG | + | chr7.4:297562-297581 | None:intergenic | 60.0% |
CACACCACCACCAGCTGTGG+TGG | + | chr7.4:297572-297591 | None:intergenic | 65.0% | |
GATCAGCAGCAGGAGCAGGG+TGG | + | chr7.4:297468-297487 | None:intergenic | 65.0% | |
GGATGAGGAGGAGGAGGAGG+AGG | - | chr7.4:296814-296833 | MS.gene050705:CDS | 65.0% | |
TGTGTTAACCGGTGCCCCCG+GGG | + | chr7.4:296369-296388 | None:intergenic | 65.0% | |
!! | CACCACAGCTGGTGGTGGTG+TGG | - | chr7.4:297570-297589 | MS.gene050705:intron | 65.0% |
CAGCAGCAGGAGCAGGGTGG+TGG | + | chr7.4:297465-297484 | None:intergenic | 70.0% | |
! | TAACCAGTGCCCGGGGGCAC+CGG | + | chr7.4:296234-296253 | None:intergenic | 70.0% |
!! | GTGCCCCCGGGCACTGGTTA+AGG | - | chr7.4:296234-296253 | MS.gene050705:CDS | 70.0% |
!! | TGCCCCCGGGGCACTGGTTA+AGG | + | chr7.4:296357-296376 | None:intergenic | 70.0% |
TAACCGGTGCCCCCGGGCAC+TGG | - | chr7.4:296228-296247 | MS.gene050705:CDS | 75.0% | |
! | AACCAGTGCCCCGGGGGCAC+CGG | - | chr7.4:296358-296377 | MS.gene050705:CDS | 75.0% |
! | AACCGGTGCCCCCGGGGCAC+TGG | + | chr7.4:296363-296382 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.4 | gene | 295984 | 297930 | 295984 | ID=MS.gene050705 |
chr7.4 | mRNA | 295984 | 297930 | 295984 | ID=MS.gene050705.t1;Parent=MS.gene050705 |
chr7.4 | exon | 297825 | 297930 | 297825 | ID=MS.gene050705.t1.exon1;Parent=MS.gene050705.t1 |
chr7.4 | CDS | 297825 | 297930 | 297825 | ID=cds.MS.gene050705.t1;Parent=MS.gene050705.t1 |
chr7.4 | exon | 295984 | 297272 | 295984 | ID=MS.gene050705.t1.exon2;Parent=MS.gene050705.t1 |
chr7.4 | CDS | 295984 | 297272 | 295984 | ID=cds.MS.gene050705.t1;Parent=MS.gene050705.t1 |
Gene Sequence |
Protein sequence |